Pregenerated sensors for ISL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042258Ensembl transcript IDs: ENSMUST00000036060.13, ENSMUST00000176044.3
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGGGAGGAGAGGCAAACGTAAAAGAGAAACCAGCTACAGGGCATaGTTAAGAGACCCAGAATTTCACGTAACCCCTTGTCAAAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: DGRRGKRKRETSYRA*LRDPEFHVTPCQSQ Trigger: TTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGCCCTGTAGCTGGTTTCTCTTTTACGTTTGCCTCTCCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR CCA 90 bp | TGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTaGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTA | + |
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Preference number: 1 (lower is better) Translates to: CYHITLSLEQTSCAS*SVHFLIQFPLTGSL Trigger: TAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| 3UTR CCA 90 bp | AAGTTCTTGGACAGACAGGAGTCAAACACAATCCCGAGACGCTTGTaGCAAAATAGAGGTAACCTTGTTGCAATGCTTTATAAGTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: KFLDRQESNTIPRRL*QNRGNLVAMLYKLV Trigger: AACCAACTTATAAAGCATTGCAACAAGGTTACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR GCA 90 bp | TCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATaGGCTTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACT | + |
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Preference number: 1 (lower is better) Translates to: SQCCYHITLSLEQTS*ASWSVHFLIQFPLT Trigger: AGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| 3UTR CAA 90 bp | CAGCTACAGGGCATGCTTAAGAGACCCAGAATTTCACGTAACCCCTaGTCAAAGTCAACTAAAAACATTGCAAACCAACGCAGCTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: QLQGMLKRPRISRNP*SKSTKNIANQRSSA Trigger: GGCGGAGCTGCGTTGGTTTGCAATGTTTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGCCCTGTAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR-3UTR TCA 90 bp | TGGACAGACAGGAGTCAAACACAATCCCGAGACGCTTGTGGCAAAATAGAGGTACCTCTAGATGTGCAGTaGAATGAAAACGCGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: WTDRSQTQSRDACGKIEVPLDVQ*NENAHF Trigger: AAAATGCGCGTTTTCATTTCACTGCACATCTAGAGG...TACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGACAGGAGTCAAACACAATCCCGAGACGCTTGTGGCAAAATAGAGGTAACTTCATGCGCTTCCTaGAGCGTTCATTTCTTGATT | + |
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Preference number: 2 (lower is better) Translates to: WTDRSQTQSRDACGKIEVTSCAS*SVHFLI Trigger: AATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGT...TACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR CAA 90 bp | GAAAAGTTCTTGGACAGACAGGAGTCAAACACAATCCCGAGACGCTaGTGGCAAAATAGAGGTAACCTTGTTGCAATGCTTTATAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: EKFLDRQESNTIPRR*WQNRGNLVAMLYKL Trigger: CAACTTATAAAGCATTGCAACAAGGTTACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAACTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR CAA 90 bp | ACTTCATGCGCTTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATaGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCAT | + |
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Preference number: 2 (lower is better) Translates to: TSCASWSVHFLIQFP*TGSLNTFYFGVQRH Trigger: ATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGGCAGTGACCAATGGAGCGTTCATTTCTaGATTCAGTTTCCATTGACT | + |
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Preference number: 3 (lower is better) Translates to: GWFLPLCAGAPVWQGSDQWSVHF*IQFPLT Trigger: AGTCAATGGAAACTGAATCAAGAAATGAACGCTCCA...TTGGTCACTGCCTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR GCA 72 bp | AGAGGCAAACGTAAAAGAGAAACCAGCTACAGGGCATaGTTAAGAGACCCAGAATTTCACGTAACCCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: RGKRKRETSYRA*LRDPEFHVTPC Trigger: ACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGCCCTGTAGCTGGTTTCTCTTTTACGTTTGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR CCA 72 bp | ACCAATAACTATACACATCTTTGGGGGAAAAGTTCTTaGACAGACAGGAGTCAAACACAATCCCGAGACGCT | + |
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Preference number: 3 (lower is better) Translates to: TNNYTHLWGKSS*TDRSQTQSRDA Trigger: AGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAACTTTTCCCCCAAAGATGTGTATAGTTATTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR-3UTR CAA 90 bp | TCAACTAAAAACATTGCAAACCAACGCAGCTCCGCCTTCCTGAAAGGACACTTTGTACTCCTAAGGTCATaGAATAGCATATGTTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: STKNIANQRSSAFLKGHFVLLRS*NSICWA Trigger: AGCCCAACATATGCTATTCAATGACCTTAGGAGTAC...AAAGTGTCCTTTCAGGAAGGCGGAGCTGCGTTGGTTTGCAATGTTTTTAGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| 3UTR CCA 72 bp | ATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTaGAGCGTTCATTTCTTGATTCAGTTTCCATTGACT | + |
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Preference number: 3 (lower is better) Translates to: ITLSLEQTSCAS*SVHFLIQFPLT Trigger: AGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| 3UTR-3UTR CAA 90 bp | GCATGCTTAAGAGACCCAGAATTTCACGTAACCCCTTGTCAAAGTCAACTAAAATTGATTCAGTTTCCATaGACTGGGTCGTTAAATACT | + |
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Preference number: 3 (lower is better) Translates to: ACLRDPEFHVTPCQSQLKLIQFP*TGSLNT Trigger: AGTATTTAACGACCCAGTCAATGGAAACTGAATCAA...TTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR CCA 90 bp | CAAGTCACTGAGGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGTTCTCCGGCTGCTTGTaGACGTGCGGCCGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: QVTEAGFFRSVPELLFGKFSGCL*TCGRRA Trigger: AGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAA...CTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCCTCAGTGACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR TCA 90 bp | CAAGTCACTGAGGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGCTGGATGCAAGGGACTaGGAGGGTCTCCAGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QVTEAGFFRSVPELLFGKLDARD*EGLQLP Trigger: TGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAG...CTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCCTCAGTGACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR GCA 90 bp | GGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGGCAGTGACCAACGCAAGGTGTGCAGCTaGTTCTCGTTGAGCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GWFLPLCAGAPVWQGSDQRKVCS*FSLSTV Trigger: GACTGTGCTCAACGAGAAGCAGCTGCACACCTTGCG...TTGGTCACTGCCTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR GCA 90 bp | TACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATGGCTGCTTGTGGACGTaGGGCCGCAGAGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YHITLSLEQTSCASWSVHGCLWT*GRRAGC Trigger: GCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCC...ATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | TGGACAGACAGGAGTCAAACACAATCCCGAGACGCTTGTGGCAAAATAGAGGTACTCCAGCTCCCAGGCTaGCTCTCTCCACCACATCGT | + |
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Preference number: 4 (lower is better) Translates to: WTDRSQTQSRDACGKIEVLQLPG*LSPPHR Trigger: ACGATGTGGTGGAGAGAGCCAGCCTGGGAGCTGGAG...TACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR GCA 90 bp | TCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTGTGGTCTTCTCCGGCTaGTTGTGGACGTGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SWSVHFLIQFPLTGSLNTVVFSG*LWTCGR Trigger: GCGGCCGCACGTCCACAAGCAGCCGGAGAAGACCAC...AGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | GTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACGGCTGCTTGTGGACGTaGGGCCGCAGAGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VVKYFLFRSSTSFPTFSNGCLWT*GRRAGC Trigger: GCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCC...GTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR TCA 90 bp | TCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTCTGGATGCAAGGGACTaGGAGGGTCTCCAGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SWSVHFLIQFPLTGSLNTLDARD*EGLQLP Trigger: TGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAG...AGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | TTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACAGAGGCCGCGCTGGATaGAAGGGACTGAGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FLERSFLDSVSIDWVVKYRGRAG*KGLRGS Trigger: AGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCT...GTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | GTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACGTGGTCTTCTCCGGCTaGTTGTGGACGTGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VVKYFLFRSSTSFPTFSNVVFSG*LWTCGR Trigger: GCGGCCGCACGTCCACAAGCAGCCGGAGAAGACCAC...GTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | ACACATCTTTGGGGGAAAAGTTCTTGGACAGACAGGAGTCAAACACAATCCCGACGGAAACACTCGATGTaGTACACCTTAGAGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: THLWGKSSWTDRSQTQSRRKHSM*YTLERA Trigger: TGCCCGCTCTAAGGTGTACCACATCGAGTGTTTCCG...TCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAACTTTTCCCCCAAAGATGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR TCA 90 bp | TTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTCGAAGTCGTTCTTGCTaGAGCCTATGCTGCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPYHFVIRTDFMRFLERRSRSC*SLCCTW Trigger: CCAAGTGCAGCATAGGCTTCAGCAAGAACGACTTCG...ACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR TCA 90 bp | TGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCATTCGTCTCCCGGGATaGGCTGTCGGCTGCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: WVVKYFLFRSSTSFPTFSIRLPG*AVGCRL Trigger: TAGCCTGCAGCCGACAGCTCATCCCGGGAGACGAAT...GGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | ATTGCAAACCAACGCAGCTCCGCCTTCCTGAAAGGACACTTTCAAGTCACTGAGACATTTCAAACATGCTaGATGCCACTCCAAATCCGG | + |
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Preference number: 4 (lower is better) Translates to: IANQRSSAFLKGHFQVTETFQTC*MPLQIR Trigger: CCGGATTTGGAGTGGCATGCAGCATGTTTGAAATGT...CTCAGTGACTTGAAAGTGTCCTTTCAGGAAGGCGGAGCTGCGTTGGTTTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
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| CDS-3UTR GCA 90 bp | TGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTTGGTTCGGCTGCCATTTaGAGAGGCCGCGCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: WSVHFLIQFPLTGSLNTFGSAAI*RGRAGC Trigger: GCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACC...AAAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | TTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: LLPYHFVIRTDFMRFLERSLGCC*WSCFIM Trigger: CATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGA...ACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | CTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: LPYHFVIRTDFMRFLERSSLGCC*WSCFIM Trigger: CATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGA...TGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | TTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTCGGAAACACTCGATGTaGTACACCTTAGAGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLPYHFVIRTDFMRFLERRKHSM*YTLERA Trigger: TGCCCGCTCTAAGGTGTACCACATCGAGTGTTTCCG...ACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTTCTCCGGCTGCTTGTaGACGTGCGGCCGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLFSGCL*TCGRRA Trigger: AGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAA...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | CTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTCAGTCCGCACTCGGGTaGTCTTCTCCGGCTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LERSFLDSVSIDWVVKYFQSALG*SSPAAC Trigger: ACAAGCAGCCGGAGAAGACCACCCGAGTGCGGACTG...AAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR TCA 90 bp | TACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATCGAAGTCGTTCTTGCTaGAGCCTATGCTGCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: YHITLSLEQTSCASWSVHRSRSC*SLCCTW Trigger: CCAAGTGCAGCATAGGCTTCAGCAAGAACGACTTCG...ATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | ATTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTAGAGGCCGCGCTGGATaGAAGGGACTGAGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IDWVVKYFLFRSSTSFPTRGRAG*KGLRGS Trigger: AGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCT...AGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | TCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGTTCGGCTGCCATTTaGAGAGGCCGCGCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SLNTFYFGVQRHFPLSPTGSAAI*RGRAGC Trigger: GCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACC...TGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | TTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACCTCTCCACCACATCGTaGTCTGCACGGCAGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLERSFLDSVSIDWVVKYLSTTS*SARQKS Trigger: GCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAG...GTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR CCA 90 bp | GTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACCAGTCCGCACTCGGGTaGTCTTCTCCGGCTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VVKYFLFRSSTSFPTFSNQSALG*SSPAAC Trigger: ACAAGCAGCCGGAGAAGACCACCCGAGTGCGGACTG...GTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR TCA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTCTAGTTGCTCCTTCATaGGCGCATCTGGCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLLVAPS*AHLAEG Trigger: ACCCTCGGCCAGATGCGCTCATGAAGGAGCAACTAG...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR TCA 90 bp | ATTGTCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCTAGTTGCTCCTTCATaGGCGCATCTGGCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IVFTVLLPYHFVIRTDFMLVAPS*AHLAEG Trigger: ACCCTCGGCCAGATGCGCTCATGAAGGAGCAACTAG...CATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | CTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTCGCAAGGTGTGCAGCTaGTTCTCGTTGAGCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LERSFLDSVSIDWVVKYFRKVCS*FSLSTV Trigger: GACTGTGCTCAACGAGAAGCAGCTGCACACCTTGCG...AAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS-3UTR GCA 90 bp | ACACATCTTTGGGGGAAAAGTTCTTGGACAGACAGGAGTCAAACACAATCCCGATGCGTTTCTTGTCCTTaGACCGCTTGTTTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: THLWGKSSWTDRSQTQSRCVSCP*TACFET Trigger: GGTTTCAAAACAAGCGGTGCAAGGACAAGAAACGCA...TCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAACTTTTCCCCCAAAGATGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR GCA 90 bp | TCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQCCYHITLSLEQTSCACCCWS*FIMMLR Trigger: ACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCA...AGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | GCATGCTTAAGAGACCCAGAATTTCACGTAACCCCTTGTCAAAGTCAACTAAAAGGTGTATCTGGGAGCTaGGAGGACATCGATGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: ACLRDPEFHVTPCQSQLKGVSGS*EDIDAT Trigger: AGTAGCATCGATGTCCTCGCAGCTCCCAGATACACC...TTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR GCA 90 bp | TGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTTTCAAACATGCTGCATaGCACTCCAAATCCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CYHITLSLEQTSCASWSVFKHAA*HSKSGE Trigger: TTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAA...AACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | ATTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTCACCACATCGTGGTCTaGACGGCAGAAAAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IDWVVKYFLFRSSTSFPTHHIVV*TAEKPI Trigger: GATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTG...AGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTCACCACATCGTGGTCTaGACGGCAGAAAAGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLHHIVV*TAEKPI Trigger: GATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTG...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAGGTGTATCTGGGAGCTaGGAGGACATCGATGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GSLNTFYFGVQRHFPLSPGVSGS*EDIDAT Trigger: AGTAGCATCGATGTCCTCGCAGCTCCCAGATACACC...TGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CCA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTGCTGTTGGGTGTATCTaGGAGCTGCGAGGACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLAVGCI*ELRGHR Trigger: TCGATGTCCTCGCAGCTCCCAGATACACCCAACAGC...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGGCTGTTGGGTGTATCTaGGAGCTGCGAGGACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: IVFTVLLPYHFVIRTDFMAVGCI*ELRGHR Trigger: TCGATGTCCTCGCAGCTCCCAGATACACCCAACAGC...CATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CCA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGTGGCTACCATGCTGTTaGGTGTATCTGGGAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRWLPCC*VYLGAA Trigger: CGCAGCTCCCAGATACACCCAACAGCATGGTAGCCA...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR TCA 90 bp | AATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGGAAGGAGCTGCTTCATCATaGTGCTGCGTTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTFYFGVQRHFPLSPTGEGAASS*CCVSCP Trigger: AGGACAAGAAACGCAGCATCATGATGAAGCAGCTCC...TTCCCCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCGGTCGTGAATTTGATTaGCGCAACCAACACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVVKYFLFRSSTSFPTFSGREFD*RNQHTG Trigger: CCCTGTGTGTTGGTTGCGGCAATCAAATTCACGACC...GGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | GTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VVKYFLFRSSTSFPTFSNCCCWS*FIMMLR Trigger: ACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCA...GTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCCTGCGAGGACATCGATaGTACTTCACTGCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVVKYFLFRSSTSFPTFSLRGHR*YFTASR Trigger: TCTACTGGCAGTGAAGTAGCATCGATGTCCTCGCAG...GGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCACTCTCCACCACATCGTaGTCTGCACGGCAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSVSIDWVVKYFLFRSSLSTTS*SARQKS Trigger: GCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAG...TGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| 3UTR CAA 72 bp | GGCATGCTTAAGAGACCCAGAATTTCACGTAACCCCTaGTCAAAGTCAACTAAAAACATTGCAAACCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: GMLKRPRISRNP*SKSTKNIANQR Trigger: GCGTTGGTTTGCAATGTTTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR GCA 90 bp | ATTGTCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGGGTCGTGAATTTGATTaGCGCAACCAACACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVFTVLLPYHFVIRTDFMGREFD*RNQHTG Trigger: CCCTGTGTGTTGGTTGCGGCAATCAAATTCACGACC...CATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGTTGCACCGCTTGTTTTaGAACCACACTCGGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: IVFTVLLPYHFVIRTDFMLHRLF*NHTRMT Trigger: AGTCATCCGAGTGTGGTTTCAAAACAAGCGGTGCAA...CATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR TCA 90 bp | GCATGCTTAAGAGACCCAGAATTTCACGTAACCCCTTGTCAAAGTCAACTAAAACTCCTTCTGAAAAATTaGCCAGTTGCTGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACLRDPEFHVTPCQSQLKLLLKN*PVAEKQ Trigger: CTGCTTTTCAGCAACTGGTCAATTTTTCAGAAGGAG...TTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACCTCCTTCTGAAAAATTaGCCAGTTGCTGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLERSFLDSVSIDWVVKYLLLKN*PVAEKQ Trigger: CTGCTTTTCAGCAACTGGTCAATTTTTCAGAAGGAG...GTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | AATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGGAACGCACATTTCAAACATaGTGCATGCCACTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NTFYFGVQRHFPLSPTGERTFQT*CMPLQI Trigger: GATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCG...TTCCCCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTTGCGTTTCTTGTCCTTaGACCGCTTGTTTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LERSFLDSVSIDWVVKYFCVSCP*TACFET Trigger: GGTTTCAAAACAAGCGGTGCAAGGACAAGAAACGCA...AAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR TCA 90 bp | GGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCACTTTCGTCCAAATACTaGTTACACTCCGCACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLNTFYFGVQRHFPLSPLSSKY*LHSAHF Trigger: GAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAG...TGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACTTTCTTTCGTCCAAATACTaGTTACACTCCGCACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LERSFLDSVSIDWVVKYFLSSKY*LHSAHF Trigger: GAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAG...AAAGTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGTTCAAACATGCTGCATaGCACTCCAAATCCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRFKHAA*HSKSGE Trigger: TTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAA...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR GCA 90 bp | GTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACCGCACATTTCAAACATaGTGCATGCCACTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VVKYFLFRSSTSFPTFSNRTFQT*CMPLQI Trigger: GATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCG...GTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CCA 90 bp | ATTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTGTTCCTGTCATCCCCTaGATATTAGTTTTGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDWVVKYFLFRSSTSFPTVPVIP*ILVLSL Trigger: CAACGACAAAACTAATATCCAGGGGATGACAGGAAC...AGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 90 bp | GTGGTCTTCTCCGGCTGCTTGTGGACGTGCGGCCGCAGAGCTGGCTaGCTAGCCGAGATGGGTTCGGCTGCCATTTGCAGAGGCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVFSGCLWTCGRRAG*LAEMGSAAICRGRA Trigger: AGCGCGGCCTCTGCAAATGGCAGCCGAACCCATCTCGGCTAGGCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAGACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 90 bp | TCGGGTGGTCTTCTCCGGCTGCTTGTGGACGTGCGGCCGCAGAGCTaGCTGCCTAGCCGAGATGGGTTCGGCTGCCATTTGCAGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGGLLRLLVDVRPQS*LPSRDGFGCHLQRP Trigger: CGGCCTCTGCAAATGGCAGCCGAACCCATCTCGGCTAGGCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAGACCACCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 90 bp | CTAGCCGAGATGGGTTCGGCTGCCATTTGCAGAGGCCGCGCTGGATaGAAGGGACTGAGAGGGTCTCCAGCTCCCAGGCTGGCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAEMGSAAICRGRAG*KGLRGSPAPRLALS Trigger: GGAGAGAGCCAGCCTGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCCATCTCGGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 90 bp | CTGCCTAGCCGAGATGGGTTCGGCTGCCATTTGCAGAGGCCGCGCTaGATGCAAGGGACTGAGAGGGTCTCCAGCTCCCAGGCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSRDGFGCHLQRPR*MQGTERVSSSQAGS Trigger: AGAGCCAGCCTGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCCATCTCGGCTAGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS TCA 90 bp | TGGGTTCGGCTGCCATTTGCAGAGGCCGCGCTGGATGCAAGGGACTaGGAGGGTCTCCAGCTCCCAGGCTGGCTCTCTCCACCACATCGT | + |
|
Preference number: 5 (lower is better) Translates to: WVRLPFAEAALDARD*EGLQLPGWLSPPHR Trigger: ACGATGTGGTGGAGAGAGCCAGCCTGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 90 bp | AGGGTCTCCAGCTCCCAGGCTGGCTCTCTCCACCACATCGTGGTCTaGACGGCAGAAAAGCCCATCCTCCCGCAGGGCGAATTCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSSSQAGSLHHIVV*TAEKPILPQGEFVS Trigger: GGAGACGAATTCGCCCTGCGGGAGGATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAGAGCCAGCCTGGGAGCTGGAGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 90 bp | CTGAGAGGGTCTCCAGCTCCCAGGCTGGCTCTCTCCACCACATCGTaGTCTGCACGGCAGAAAAGCCCATCCTCCCGCAGGGCGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRGSPAPRLALSTTS*SARQKSPSSRRANS Trigger: CGAATTCGCCCTGCGGGAGGATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAGAGCCAGCCTGGGAGCTGGAGACCCTCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | GGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGGCAGTGACCAAGGGTTCGGCTGCCATTaGCAGAGGCCGCGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWFLPLCAGAPVWQGSDQGFGCH*QRPRWM Trigger: CATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCC...TTGGTCACTGCCTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGGTTTCTTCCGCTCTGTGCCGGAGCTCCTGTTTGGCAAGGCAGTGACCAACTGGCTACCATGCTGTaGGGTGTATCTGGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWFLPLCAGAPVWQGSDQLATML*GVSGSC Trigger: GCAGCTCCCAGATACACCCAACAGCATGGTAGCCAG...TTGGTCACTGCCTTGCCAAACAGGAGCTCCGGCACAGAGCGGAAGAAACCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS CCA 90 bp | GGGATGAGCTGTCGGCTGCAGGCTACACAGCGGAAACACTCGATGTaGTACACCTTAGAGCGGGCACGCATCACGAAGTCGTTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMSCRLQATQRKHSM*YTLERARITKSFLL Trigger: CAGCAAGAACGACTTCGTGATGCGTGCCCGCTCTAAGGTGTACCACATCGAGTGTTTCCGCTGTGTAGCCTGCAGCCGACAGCTCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 90 bp | TGCACCTCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTGCTaGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCCTTGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: CTSTGLAVLSLGCCC*SCFIMMLRFLSLHR Trigger: GCGGTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGAGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS CCA 90 bp | CCTGTCATCCCCTGGATATTAGTTTTGTCGTTGGGTTGCTGCTGCTaGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCCTTGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PVIPWILVLSLGCCC*SCFIMMLRFLSLHR Trigger: GCGGTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGGGATGACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 90 bp | CTTTGCACCTCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCTSTGLAVLSLGCC*WSCFIMMLRFLSLH Trigger: GTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGAGGTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | CAAACACAATCCCGAGACGCTTGTGGCAAAATAGAGGTAACCTTGTTGCAATGCGGGCGGCTGGTAACTTaGCACCTCTACTGGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTQSRDACGKIEVTLLQCGRLVT*HLYWVS Trigger: GCTAACCCAGTAGAGGTGCAAAGTTACCAGCCGCCC...GCATTGCAACAAGGTTACCTCTATTTTGCCACAAGCGTCTCGGGATTGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 90 bp | GTTCCTGTCATCCCCTGGATATTAGTTTTGTCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPVIPWILVLSLGCC*WSCFIMMLRFLSLH Trigger: GTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGGGATGACAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 90 bp | TCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGTTTCTTGTCCTTGCACCGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: STGLAVLSLGCCCWS*FIMMLRFLSLHRLF Trigger: AAACAAGCGGTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCGTCTTCTCCGGCTGCTaGTGGACGTGCGGCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVVKYFLFRSSTSFPTFSVFSGC*WTCGRR Trigger: TCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAGAC...GGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 90 bp | ATCCCCTGGATATTAGTTTTGTCGTTGGGTTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGTTTCTTGTCCTTGCACCGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPWILVLSLGCCCWS*FIMMLRFLSLHRLF Trigger: AAACAAGCGGTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR CAA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGTCTTCTCCGGCTGCTaGTGGACGTGCGGCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRVFSGC*WTCGRR Trigger: TCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAGAC...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTAAGCCTATGCTGCACTaGGCGCATTTGATCCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CYHITLSLEQTSCASWSVKPMLH*AHLIPY Trigger: GTACGGGATCAAATGCGCCAAGTGCAGCATAGGCTT...AACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGTTCGGCTGCCATTaGCAGAGGCCGCGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLNTFYFGVQRHFPLSPTGFGCH*QRPRWM Trigger: CATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCC...TGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATTTCTTGATTGGGCGGCTGGTAACTTaGCACCTCTACTGGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLEQTSCASWSVHFLIGRLVT*HLYWVS Trigger: GCTAACCCAGTAGAGGTGCAAAGTTACCAGCCGCCC...AATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATTTCTTGATTCTGGCTACCATGCTGTaGGGTGTATCTGGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLEQTSCASWSVHFLILATML*GVSGSC Trigger: GCAGCTCCCAGATACACCCAACAGCATGGTAGCCAG...AATCAAGAAATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TCAACTAAAAACATTGCAAACCAACGCAGCTCCGCCTTCCTGAAAGGACACTTTATCACGAAGTCGTTCTaGCTGAAGCCTATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STKNIANQRSSAFLKGHFITKSF*LKPMLH Trigger: GTGCAGCATAGGCTTCAGCAAGAACGACTTCGTGAT...AAAGTGTCCTTTCAGGAAGGCGGAGCTGCGTTGGTTTGCAATGTTTTTAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR CAA 90 bp | TACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTTCCTGGAGCGTTCATTTAGCAGTTTTGTCGTaGGGTTGCTGCTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YHITLSLEQTSCASWSVHLAVLS*GCCCWS Trigger: GCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAA...ATGAACGCTCCAGGAAGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS GCA 90 bp | GCTTTCGTCCAAATACTGATTACACTCCGCACATTTCAAACATGCTaGATGCCACTCCAAATCCGGAGAAACCCTCAGAATATACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFVQILITLRTFQTC*MPLQIRRNPQNILV Trigger: GACCAGTATATTCTGAGGGTTTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS TCA 90 bp | GTTTTCCCATCCCTAACAAAGCACGTACAGCTTTCGTCCAAATACTaGTTACACTCCGCACATTTCAAACATGCTGCATGCCACTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VFPSLTKHVQLSSKY*LHSAHFKHAACHSK Trigger: TTTGGAGTGGCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAGCTGTACGTGCTTTGTTAGGGATGGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 90 bp | ACAGCTTTCGTCCAAATACTGATTACACTCCGCACATTTCAAACATaGTGCATGCCACTCCAAATCCGGAGAAACCCTCAGAATATACTG | + |
|
Preference number: 5 (lower is better) Translates to: TAFVQILITLRTFQT*CMPLQIRRNPQNIL Trigger: CAGTATATTCTGAGGGTTTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | AATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGGAACTGCACTTGGCGCATTaGATCCCGTACAACCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: NTFYFGVQRHFPLSPTGELHLAH*IPYNLI Trigger: TATCAGGTTGTACGGGATCAAATGCGCCAAGTGCAG...TTCCCCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCACAGTGTTGCTACCATATCACTTTGTCATTAGAACAGACTTCATGCGCTATGATGCTGCGTTTCTaGTCCTTGCACCGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSQCCYHITLSLEQTSCAMMLRF*SLHRLF Trigger: AAACAAGCGGTGCAAGGACAAGAAACGCAGCATCAT...AGCGCATGAAGTCTGTTCTAATGACAAAGTGATATGGTAGCAACACTGTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTAGTTTTGTCGTTGGGTaGCTGCTGCTGGAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLSFVVG*LLLELL Trigger: AAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACT...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | AATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGGAACTGATCTATGTCGCTTaGCAAGGCGAAGTCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTFYFGVQRHFPLSPTGELIYVA*QGEVTQ Trigger: CTGAGTGACTTCGCCTTGCAAAGCGACATAGATCAG...TTCCCCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTGGAGCGTTCATTTCTTGATTCAGTTTCCATTGACTGGGTCGTTAAATACATACTGGTCGTGAATTaGATTGCCGCAACCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: FLERSFLDSVSIDWVVKYILVVN*IAATNT Trigger: TGTGTTGGTTGCGGCAATCAAATTCACGACCAGTAT...GTATTTAACGACCCAGTCAATGGAAACTGAATCAAGAAATGAACGCTCCAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGCTGCACTTGGCGCATTaGATCCCGTACAACCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRLHLAH*IPYNLI Trigger: TATCAGGTTGTACGGGATCAAATGCGCCAAGTGCAG...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TTGACTGGGTCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTCTTGCACCGCTTGTTTaGAAACCACACTCGGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTGSLNTFYFGVQRHFPLLAPLV*KPHSDD Trigger: GTCATCCGAGTGTGGTTTCAAAACAAGCGGTGCAAG...AAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGACCCAGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | AATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGGGAAATGATGCTGCGTTTCTaGTCCTTGCACCGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTFYFGVQRHFPLSPTGEMMLRF*SLHRLF Trigger: AAACAAGCGGTGCAAGGACAAGAAACGCAGCATCAT...TTCCCCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | ATGCTTAAGAGACCCAGAATTTCACGTAACCCCTTGTCAAAGTCAACTAAAAACATATTAGTTTTGTCGTaGGGTTGCTGCTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLKRPRISRNPLSKSTKNILVLS*GCCCWS Trigger: GCTCCAGCAGCAGCAACCCAACGACAAAACTAATAT...GTTTTTAGTTGACTTTGACAAGGGGTTACGTGAAATTCTGGGTCTCTTAAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS-3UTR CAA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGCTGATCTATGTCGCTTaGCAAGGCGAAGTCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRLIYVA*QGEVTQ Trigger: CTGAGTGACTTCGCCTTGCAAAGCGACATAGATCAG...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAATCACGAAGTCGTTCTaGCTGAAGCCTATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLNTFYFGVQRHFPLSPTITKSF*LKPMLH Trigger: GTGCAGCATAGGCTTCAGCAAGAACGACTTCGTGAT...TGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | TCGTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACACTTGCACCGCTTGTTTaGAAACCACACTCGGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLNTFYFGVQRHFPLSPTLAPLV*KPHSDD Trigger: GTCATCCGAGTGTGGTTTCAAAACAAGCGGTGCAAG...TGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAACGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS-3UTR CAA 90 bp | GTTAAATACTTTTTATTTCGGAGTTCAACGTCATTTCCCACTTTCTCCAACAGGATACTGGTCGTGAATTaGATTGCCGCAACCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: VKYFLFRSSTSFPTFSNRILVVN*IAATNT Trigger: TGTGTTGGTTGCGGCAATCAAATTCACGACCAGTAT...CCTGTTGGAGAAAGTGGGAAATGACGTTGAACTCCGAAATAAAAAGTATTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | CGCACTCGGGTGGTCTTCTCCGGCTGCTTGTGGACGTaGGGCCGCAGAGCTGGCTGCCTAGCCGAGATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RTRVVFSGCLWT*GRRAGCLAEMG Trigger: ACCCATCTCGGCTAGGCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAGACCACCCGAGTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | TCCGGCTGCTTGTGGACGTGCGGCCGCAGAGCTGGCTaGCTAGCCGAGATGGGTTCGGCTGCCATTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGCLWTCGRRAG*LAEMGSAAICR Trigger: TCTGCAAATGGCAGCCGAACCCATCTCGGCTAGGCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | CTTCTCCGGCTGCTTGTGGACGTGCGGCCGCAGAGCTaGCTGCCTAGCCGAGATGGGTTCGGCTGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRLLVDVRPQS*LPSRDGFGCHL Trigger: CAAATGGCAGCCGAACCCATCTCGGCTAGGCAGCCAGCTCTGCGGCCGCACGTCCACAAGCAGCCGGAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS TCA 72 bp | GCCCATCCTCCCGCAGGGCGAATTCGTCTCCCGGGATaGGCTGTCGGCTGCAGGCTACACAGCGGAAACACT | + |
|
Preference number: 6 (lower is better) Translates to: AHPPAGRIRLPG*AVGCRLHSGNT Trigger: AGTGTTTCCGCTGTGTAGCCTGCAGCCGACAGCTCATCCCGGGAGACGAATTCGCCCTGCGGGAGGATGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | AGCTCCCAGGCTGGCTCTCTCCACCACATCGTGGTCTaGACGGCAGAAAAGCCCATCCTCCCGCAGGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSQAGSLHHIVV*TAEKPILPQGE Trigger: TTCGCCCTGCGGGAGGATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAGAGCCAGCCTGGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | ATGGGTTCGGCTGCCATTTGCAGAGGCCGCGCTGGATaGAAGGGACTGAGAGGGTCTCCAGCTCCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MGSAAICRGRAG*KGLRGSPAPRL Trigger: CAGCCTGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | TCTCCAGCTCCCAGGCTGGCTCTCTCCACCACATCGTaGTCTGCACGGCAGAAAAGCCCATCCTCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPAPRLALSTTS*SARQKSPSSRR Trigger: CCTGCGGGAGGATGGGCTTTTCTGCCGTGCAGACCACGATGTGGTGGAGAGAGCCAGCCTGGGAGCTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | CGAGATGGGTTCGGCTGCCATTTGCAGAGGCCGCGCTaGATGCAAGGGACTGAGAGGGTCTCCAGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDGFGCHLQRPR*MQGTERVSSSQ Trigger: CTGGGAGCTGGAGACCCTCTCAGTCCCTTGCATCCAGCGCGGCCTCTGCAAATGGCAGCCGAACCCATCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | TGTCGGCTGCAGGCTACACAGCGGAAACACTCGATGTaGTACACCTTAGAGCGGGCACGCATCACGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CRLQATQRKHSM*YTLERARITKS Trigger: CGACTTCGTGATGCGTGCCCGCTCTAAGGTGTACCACATCGAGTGTTTCCGCTGTGTAGCCTGCAGCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CAA 72 bp | GACCAGTTGCTGAAAAGCAGGCTGATCTATGTCGCTTaGCAAGGCGAAGTCACTCAGTACTTTCCAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DQLLKSRLIYVA*QGEVTQYFPGR Trigger: CCGCCCTGGAAAGTACTGAGTGACTTCGCCTTGCAAAGCGACATAGATCAGCCTGCTTTTCAGCAACTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS CAA 90 bp | TTGCAAGGCGAAGTCACTCAGTACTTTCCAGGGCGGCTGGTAACTTaGCACCTCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQGEVTQYFPGRLVT*HLYWVSSFVVGLLL Trigger: CAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGAGGTGCAAAGTTACCAGCCGCCCTGGAAAGTACTGAGTGACTTCGCCTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS TCA 72 bp | TGTCGTTGGGTTGCTGCTGCTGGAGCTGCTTCATCATaGTGCTGCGTTTCTTGTCCTTGCACCGCTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRWVAAAGAASS*CCVSCPCTACF Trigger: AAAACAAGCGGTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | ACCTCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTaGTGCTGGAGCTGCTTCATCATGATGCTGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSTGLAVLSLGC*CWSCFIMMLRF Trigger: GAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | ACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTGCTaGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGLAVLSLGCCC*SCFIMMLRFLS Trigger: GGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS CAA 72 bp | GAAGTCACTCAGTACTTTCCAGGGCGGCTGGTAACTTaGCACCTCTACTGGGTTAGCAGTTTTGTCGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVTQYFPGRLVT*HLYWVSSFVVG Trigger: CCCAACGACAAAACTGCTAACCCAGTAGAGGTGCAAAGTTACCAGCCGCCCTGGAAAGTACTGAGTGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | GTCATCCCCTGGATATTAGTTTTGTCGTTGGGTTGCTaGTGCTGGAGCTGCTTCATCATGATGCTGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VIPWILVLSLGC*CWSCFIMMLRF Trigger: GAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGGGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 72 bp | TTAGCAGTTTTGTCGTTGGGTTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGTTTCTTGTCCTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAVLSLGCCCWS*FIMMLRFLSLH Trigger: GTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | TCTACTGGGTTAGCAGTTTTGTCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATGATGCTGCGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: STGLAVLSLGCC*WSCFIMMLRFL Trigger: CAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTGCTAACCCAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176044.3 |
||
| CDS CCA 72 bp | CCCTGGATATTAGTTTTGTCGTTGGGTTGCTGCTGCTaGAGCTGCTTCATCATGATGCTGCGTTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PWILVLSLGCCC*SCFIMMLRFLS Trigger: GGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 72 bp | ATCCCCTGGATATTAGTTTTGTCGTTGGGTTGCTGCTaGTGGAGCTGCTTCATCATGATGCTGCGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IPWILVLSLGCC*WSCFIMMLRFL Trigger: CAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATATCCAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS GCA 72 bp | GTCCAAATACTGATTACACTCCGCACATTTCAAACATaGTGCATGCCACTCCAAATCCGGAGAAACCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VQILITLRTFQT*CMPLQIRRNPQ Trigger: CTGAGGGTTTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
||
| CDS GCA 72 bp | ATATTAGTTTTGTCGTTGGGTTGCTGCTGCTGGAGCTaGTTCATCATGATGCTGCGTTTCTTGTCCTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILVLSLGCCCWS*FIMMLRFLSLH Trigger: GTGCAAGGACAAGAAACGCAGCATCATGATGAAGCAGCTCCAGCAGCAGCAACCCAACGACAAAACTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036060.13 |
||
| CDS CAA 72 bp | ATCCGGAGAAACCCTCAGAATATACTGGTCGTGAATTaGATTGCCGCAACCAACACACAGGGAAATCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: IRRNPQNILVVN*IAATNTQGNQT Trigger: CGTCTGATTTCCCTGTGTGTTGGTTGCGGCAATCAAATTCACGACCAGTATATTCTGAGGGTTTCTCCGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS TCA 72 bp | TCCCTAACAAAGCACGTACAGCTTTCGTCCAAATACTaGTTACACTCCGCACATTTCAAACATGCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: SLTKHVQLSSKY*LHSAHFKHAAC Trigger: GCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTGGACGAAAGCTGTACGTGCTTTGTTAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS GCA 72 bp | CAAATACTGATTACACTCCGCACATTTCAAACATGCTaGATGCCACTCCAAATCCGGAGAAACCCTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QILITLRTFQTC*MPLQIRRNPQN Trigger: ATTCTGAGGGTTTCTCCGGATTTGGAGTGGCATGCAGCATGTTTGAAATGTGCGGAGTGTAATCAGTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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| CDS GCA 72 bp | GAGAAACCCTCAGAATATACTGGTCGTGAATTTGATTaGCGCAACCAACACACAGGGAAATCAGACGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EKPSEYTGREFD*RNQHTGKSDVF Trigger: AAAAACGTCTGATTTCCCTGTGTGTTGGTTGCGGCAATCAAATTCACGACCAGTATATTCTGAGGGTTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036060.13 ENSMUST00000176044.3 |
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