Pregenerated sensors for ISG20L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048039Ensembl transcript IDs: ENSMUST00000055984.7
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACCTGTAGTCCCAGCTACTCTCGGGCCTGAGGAAGAAGTCATCTaGGCCCAAGTGTTTGAGGCCAGCCCTGGCAACTCAATTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: TPVVPATLGPEEEVI*AQVFEASPGNSIPL Trigger: TAAAGGAATTGAGTTGCCAGGGCTGGCCTCAAACACTTGGGCTCAGATGACTTCTTCCTCAGGCCCGAGAGTAGCTGGGACTACAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR GCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTaGTTCCTCAAAGTCAAGGCTGACTGGCACAAGCACCCTGTGACA | + |
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Preference number: 1 (lower is better) Translates to: PIEKVVWDTVFPGVP*FLKVKADWHKHPVT Trigger: TGTCACAGGGTGCTTGTGCCAGTCAGCCTTGACTTTGAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR CCA 90 bp | AAAAGGAGACATATCTATGACATGTGTCCCATAGAGAAGGTAGTGTaGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCAAAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: KRRHIYDMCPIEKVV*DTVFPGVPCFLKVK Trigger: CTTGACTTTGAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATAGATATGTCTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR TCA 90 bp | GGGCTTTACCCCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTaGCCTAGAATTAATTCTGTAGTCCAGGCAGACTTTACATCTATA | + |
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Preference number: 1 (lower is better) Translates to: GLYPWPSFYVRTGSH*PRINSVVQADFTSI Trigger: TATAGATGTAAAGTCTGCCTGGACTACAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGGGGTAAAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR GCA 90 bp | TCTTTCCTTCTCTGTTTCTACTTCTCTGACCCAGAGCTTTTTCTATaGACTCAGATTGGTCTTAAACTTTTGATCTCCCTGCCTTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SFLLCFYFSDPELFL*TQIGLKLLISLPWP Trigger: AGGCCAAGGCAGGGAGATCAAAAGTTTAAGACCAATCTGAGTGCATAGAAAAAGCTCTGGGTCAGAGAAGTAGAAACAGAGAAGGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGTGGGTATTAAGCCTCTaGCCAAGCCCCTCTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGPLFMLGQGLTDLELILWVLSL*PSPSPQ Trigger: CTGGGGAGAGGGGCTTGGCCAGAGGCTTAATACCCA...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCGAGATGAAATTTCAATaGGTATTAAGCCTCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLEMKFQ*VLSLWP Trigger: TGGCCAGAGGCTTAATACCCATTGAAATTTCATCTC...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTTCTAGCTTCTGCAGGTaGGAAGCTGGAAGAACTGTG | + |
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Preference number: 2 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCSSFCR*EAGRTV Trigger: CACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAGA...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTCTGCAGGTGAGAAGCTaGAAGAACTGTGGGTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: NSIPLPYSPPKGDISMTCLQVRS*KNCGLV Trigger: GACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAG...ACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR GCA 90 bp | AACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTTTCCCTGGTGTGCCTTaGTTCCTCAAAGTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: NSIPLPYSPPKGDISMTCFPGVP*FLKVKA Trigger: AGCCTTGACTTTGAGGAAGCAAGGCACACCAGGGAA...ACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CCA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGAAGCTGGAAGAACTGTaGGTTGGTCTACTGCATGTG | + |
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Preference number: 2 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMKLEEL*VGLLHV Trigger: CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTT...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CCA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGATAGAGAAGGTAGTGTaGGACACTGTTTTCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMIEKVV*DTVFPG Trigger: ACCAGGGAAAACAGTGTCCCACACTACCTTCTCTAT...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTAGGACAGGGTCTCACTaGCCTAGAATTAATTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCRTGSH*PRINSV Trigger: TACAGAATTAATTCTAGGTCAGTGAGACCCTGTCCT...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR CAA 90 bp | AGAGTCCTGAGATTACAGACCATTATGCTGAGCTCCAATCAGGACTaGTCTGAAAGTGAAAAGATACTGCTATTTACTTTAGAACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RVLRLQTIMLSSNQD*SESEKILLFTLEQK Trigger: TTTTTGTTCTAAAGTAAATAGCAGTATCTTTTCACTTTCAGACAAGTCCTGATTGGAGCTCAGCATAATGGTCTGTAATCTCAGGACTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR TCA 72 bp | AAAAGAACCATGCTGGGCGTGGTGGCGCAACACCTTTaGTCCCAGCACTCGGGAGGCAGAGGCAGGGGGATT | + |
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Preference number: 3 (lower is better) Translates to: KRTMLGVVAQHL*SQHSGGRGRGI Trigger: AATCCCCCTGCCTCTGCCTCCCGAGTGCTGGGATCAAAGGTGTTGCGCCACCACGCCCAGCATGGTTCTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR TCA 72 bp | TTTCCCTGGTGTGCCTTGCTTCCTCAAAGTCAAGGCTaGCTGGCACAAGCACCCTGTGACATGTGGTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: FPWCALLPQSQG*LAQAPCDMWLA Trigger: TGCTAACCACATGTCACAGGGTGCTTGTGCCAGTCAGCCTTGACTTTGAGGAAGCAAGGCACACCAGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR GCA 72 bp | CCCACCCCACTGCTGGAGACTGTACCTAGTGGTTTATaGATGCTAGGTAAGTGTTCTAGCGCTGGGCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: PTPLLETVPSGL*MLGKCSSAGLY Trigger: GTAAAGCCCAGCGCTAGAACACTTACCTAGCATGCATAAACCACTAGGTACAGTCTCCAGCAGTGGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR GCA 72 bp | AAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTaGTTCCTCAAAGTCAAGGCTGACTGGCACAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KVVWDTVFPGVP*FLKVKADWHKH Trigger: GTGCTTGTGCCAGTCAGCCTTGACTTTGAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR CCA 72 bp | CATATCTATGACATGTGTCCCATAGAGAAGGTAGTGTaGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HIYDMCPIEKVV*DTVFPGVPCFL Trigger: GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATAGATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CAA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTTTCCCTGGTGTGCCTaGCTTCCTCAAAGTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMFPWCA*LPQSQG Trigger: GCCTTGACTTTGAGGAAGCAAGGCACACCAGGGAAA...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR TCA 72 bp | CCCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTaGCCTAGAATTAATTCTGTAGTCCAGGCAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: PWPSFYVRTGSH*PRINSVVQADF Trigger: AAAGTCTGCCTGGACTACAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR-3UTR CAA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTTTATGGTTCATGACTTaGTATTCCATTCCTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCLWFMT*YSIPST Trigger: GGTAGAAGGAATGGAATACAAAGTCATGAACCATAA...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCTGTGGCACTTCCGGATaGCACTCCATCTGGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLCGTSG*HSIWSG Trigger: ACCGGACCAGATGGAGTGGCATCCGGAAGTGCCACA...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| 3UTR CAA 72 bp | TCGGGCCTGAGGAAGAAGTCATCTGAGCCCAAGTGTTaGAGGCCAGCCCTGGCAACTCAATTCCTTTACCCT | + |
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Preference number: 4 (lower is better) Translates to: SGLRKKSSEPKC*RPALATQFLYP Trigger: AGGGTAAAGGAATTGAGTTGCCAGGGCTGGCCTCAAACACTTGGGCTCAGATGACTTCTTCCTCAGGCCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCGGGAAGTGTCTCTGGTaGGGGACTTGGGATGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLGKCLW*GTWDES Trigger: ACTTTCATCCCAAGTCCCTCACCAGAGACACTTCCC...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCATGTGGCTCTGAGTCCCTCTTaGAGGCAGCTGCCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LASAGEKLEELWVGLLHVALSPS*RQLPLS Trigger: AGAAAGAGGCAGCTGCCTCCAAGAGGGACTCAGAGC...CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACACCAGTATTTCCAACCTaGATGTCCCGACTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTPVFPT*MSRLRS Trigger: GCTCCTGAGTCGGGACATCCAGGTTGGAAATACTGG...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACATCAGGAGCTTCTTGGTaGGATGCTTCAGTGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTSGASW*DASVTK Trigger: CTTTGTCACTGAAGCATCTCACCAAGAAGCTCCTGA...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | GTGATTCTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCCTCTTGGAGGCAGCTaGCTCTTTCTTCTTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VILASAGEKLEELWVGLLPLGGS*LFLLWA Trigger: TGCCCAAAGAAGAAAGAGGCAGCTGCCTCCAAGAGG...CAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAGAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCATGTGTTTTCTGGAGGATTCTaGGCCAGGTGCTGTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LASAGEKLEELWVGLLHVFSGGF*ARCCSH Trigger: ATGGGAACAGCACCTGGCCCAGAATCCTCCAGAAAA...CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGGTCTTTGGACTGCTCTaGGTCCCTCTTGGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMVFGLL*VPLGGS Trigger: GCTGCCTCCAAGAGGGACTCAGAGCAGTCCAAAGAC...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | GTGATTCTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGGGCATTTCCTCCAAATaGCTTTTTCGAAGGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VILASAGEKLEELWVGLLGISSK*LFRRLP Trigger: GGGCAACCTTCGAAAAAGGCATTTGGAGGAAATGCC...CAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAGAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | CTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCATGTGCATTTCACAGTCTATTaGCACCATCTTCCCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LASAGEKLEELWVGLLHVHFTVY*HHLPWQ Trigger: TTGCCAGGGAAGATGGTGGCAATAGACTGTGAAATG...CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACAAGCTTCTTGGTGAGATaGTTCAGTGACAAAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTSFLVR*FSDKVT Trigger: TGTCACTTTGTCACTGAAGCATCTCACCAAGAAGCT...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACACAAAGCGTTGATGTTTaGCATTTCCTCCAAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTQSVDV*HFLQMP Trigger: AGGCATTTGGAGGAAATGCCAAACATCAACGCTTTG...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACATGCCTCTTTCTTCTTTaGGCATGGAAGGATCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTCLFLL*AWKDLQ Trigger: TTGAAGATCCTTCCATGCCCAAAGAAGAAAGAGGCA...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCTCAAGGGCTTCTTCTTaGAGCCTTTATCCTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLSRASS*SLYPLT Trigger: AGTCAAAGGATAAAGGCTCCAAGAAGAAGCCCTTGA...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | GTGATTCTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCAAAGTGACATTTTCTaGGCAGTCAGCCTTCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: VILASAGEKLEELWVGLLQSDIF*AVSLPV Trigger: AACCGGAAGGCTGACTGCCCAGAAAATGTCACTTTG...CAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAGAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGAGAAGCAGTCTTCTTTaGAGGAGCAGGGGTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILRSSLL*RSRGQP Trigger: TGGCTGACCCCTGCTCCTTCAAAGAAGACTGCTTCT...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCTTTCTTCTTTGGGCATaGAAGGATCTTCAAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLFLLWA*KDLQNA Trigger: GGCATTTTGAAGATCCTTCCATGCCCAAAGAAGAAA...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGGTGCTTTCTTGTCTTTaGACTGCTCTGAGTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVVLSCL*TALSPS Trigger: AGAGGGACTCAGAGCAGTCCAAAGACAAGAAAGCAC...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGTGCCACCATCTTCCCTaGCAAGTTTTGGGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILCHHLP*QVLGDC Trigger: ACAGTCCCCCAAAACTTGCCAGGGAAGATGGTGGCA...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTGGAGCCTTTATCCTTTaGCTGAGCTTGGGTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCGAFIL*LSLGGV Trigger: AACTCCACCCAAGCTCAGTCAAAGGATAAAGGCTCC...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGAGTATCTTCAAGATCTaGCTCCGAGCAGTCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVSIFKI*LRAVLK Trigger: CTTTAAGACTGCTCGGAGTCAGATCTTGAAGATACT...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGGCTTCAGTGACAAAGTaGCATTTTCTGGGCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILASVTK*HFLGSQ Trigger: CTGACTGCCCAGAAAATGTCACTTTGTCACTGAAGC...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | AGGGGGATTTCTGAGTTTGAGGCCAGCGTGGTCTACAGAGTGAGTTCCAGGACAACCTTGTTAGGGGGTTaGTTCTTTTTATTCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RGISEFEASVVYRVSSRTTLLGG*FFLFRN Trigger: ATTTCTGAATAAAAAGAACCAACCCCCTAACAAGGT...TGTCCTGGAACTCACTCTGTAGACCACGCTGGCCTCAAACTCAGAAATCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGCAGCCAAGACAATGGTaGTTTCTTGTCTTTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILQPRQW*FLVFGL Trigger: CAGTCCAAAGACAAGAAAGCACCATTGTCTTGGCTG...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CCA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGGGTGCTCTTAGTCTTTaGAAGGGCACTCTGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMGALSL*KGTLKL Trigger: GAGTTTCAGAGTGCCCTTCCAAAGACTAAGAGCACC...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGTTCTTGACAAAGCGTTaGTGTTTGGCATTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILFLTKR*CLAFPP Trigger: TGGAGGAAATGCCAAACATCAACGCTTTGTCAAGAA...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | AACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTCCTTTATCCTTTGACTaGGCTTGGGTGGAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NSIPLPYSPPKGDISMTCPLSFD*AWVEFS Trigger: AGAGAACTCCACCCAAGCTCAGTCAAAGGATAAAGG...ACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTGGTGAGATGCTTCAGTaGCAAAGTGACATTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCGEMLQ*QSDIFW Trigger: CCAGAAAATGTCACTTTGTCACTGAAGCATCTCACC...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCTCTTTTTATGTTAGGACAGGGTCTCACTGACCTAGAATTAATTCTGTTTCTTTGGAGGTTCTaGGTTCAACTTAGACACCTT | + |
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Preference number: 4 (lower is better) Translates to: PGPLFMLGQGLTDLELILFLWRF*VQLRHL Trigger: AAGGTGTCTAAGTTGAACTCAGAACCTCCAAAGAAA...CAGAATTAATTCTAGGTCAGTGAGACCCTGTCCTAACATAAAAAGAGGGCCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR GCA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGGAAGGATCTTCAAAATaGCATCTACTCTTGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVEGSSK*HLLLKF Trigger: AAACTTCAAGAGTAGATGGCATTTTGAAGATCCTTC...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCATGTGTGCTCTGAGTCCCTCTaGGAGGCAGCTGCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LASAGEKLEELWVGLLHVCSESL*EAAASF Trigger: GAAAGAGGCAGCTGCCTCCAAGAGGGACTCAGAGCA...CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCCTTGCTTCCTCTTCAAGGACTTCTTCTaGGAGCCCTTCTTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PIEKVVWDTVFPGVPCFLFKDFF*EPFFWV Trigger: CACCCAGAAGAAGGGCTCCAAGAAGAAGTCCTTGAA...GAGGAAGCAAGGCACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS GCA 90 bp | GTATTTCCAACCTGGATGTCCCGACTCAGGAGCTTCTTGGTGAGATaGTTCAGTGACAAAGTGACATTTTCTGGGCAGTCAGCCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: VFPTWMSRLRSFLVR*FSDKVTFSGQSAFR Trigger: CCGGAAGGCTGACTGCCCAGAAAATGTCACTTTGTCACTGAAGCATCTCACCAAGAAGCTCCTGAGTCGGGACATCCAGGTTGGAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGATCTTCAGAACGAGCTaGGGTGGAGTTCGGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVIFRTS*GGVRYS Trigger: GCTGTACCGAACTCCACCCAAGCTCGTTCTGAAGAT...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCGACTCAGGAGCTTCTaGGTGAGATGCTTCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVRLRSF*VRCFSD Trigger: GTCACTGAAGCATCTCACCAAGAAGCTCCTGAGTCG...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTCAGTCAGCCTTCCGGTaGAGGAGTGGTATCCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCQSAFR*RSGIRE Trigger: TTCCCGGATACCACTCCTCAACCGGAAGGCTGACTG...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | GTGATTCTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCTTCTTGACAAAGCGTaGATGTTTGGCATTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VILASAGEKLEELWVGLLLLDKA*MFGISS Trigger: GGAGGAAATGCCAAACATCAACGCTTTGTCAAGAAG...CAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAGAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CTAGCTTCTGCAGGTGAGAAGCTGGAAGAACTGTGGGTTGGTCTACTGCATGTGTTCAACTTAGACACCTaGTTAGGGGGTTGGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LASAGEKLEELWVGLLHVFNLDT*LGGWFF Trigger: AAAGAACCAACCCCCTAACAAGGTGTCTAAGTTGAA...CACATGCAGTAGACCAACCCACAGTTCTTCCAGCTTCTCACCTGCAGAAGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | TATGACATGTGTCCCATAGAGAAGGTAGTGTGGGACACTGTTTTCCCTGGTGTGCTGCCTCTTTCTTCTTaGGGCATGGAAGGATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: YDMCPIEKVVWDTVFPGVLPLSS*GMEGSS Trigger: TGAAGATCCTTCCATGCCCAAAGAAGAAAGAGGCAG...CACACCAGGGAAAACAGTGTCCCACACTACCTTCTCTATGGGACACATGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | AACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTCAGAAGCAGTCTTCTTaGAAGGAGCAGGGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: NSIPLPYSPPKGDISMTCQKQSS*KEQGSA Trigger: GGCTGACCCCTGCTCCTTCAAAGAAGACTGCTTCTG...ACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGCCATTTCACAGTCTATaGCCACCATCTTCCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMPFHSL*PPSSLA Trigger: TGCCAGGGAAGATGGTGGCAATAGACTGTGAAATGG...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CAACTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTCAACTTCAACCAACTaGTACAGCTCCATTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: QLNSFTLLPTKRRHIYDMSTSTN*YSSIVA Trigger: GGCCACAATGGAGCTGTACAAGTTGGTTGAAGTTGA...CATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCTTTACCCTACTCCCCACCAAAAGGAGACATATCTATGACATGTGTTTCAAGGGCTTCTTCTaGGAGCCTTTATCCTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LNSFTLLPTKRRHIYDMCFKGFF*EPLSFD Trigger: GTCAAAGGATAAAGGCTCCAAGAAGAAGCCCTTGAA...ACACATGTCATAGATATGTCTCCTTTTGGTGGGGAGTAGGGTAAAGGAATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS CCA 90 bp | TTCTTTGGAGGTTCTGAGTTCAACTTAGACACCTTGTTAGGGGGTTaGTTCTTTTTATTCAGAAATCCTTTCTGTTCCAAGAACCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: FFGGSEFNLDTLLGG*FFLFRNPFCSKNLR Trigger: GCGAAGGTTCTTGGAACAGAAAGGATTTCTGAATAAAAAGAACCAACCCCCTAACAAGGTGTCTAAGTTGAACTCAGAACCTCCAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS CAA 72 bp | GACAAAGTGACATTTTCTGGGCAGTCAGCCTTCCGGTaGAGGAGTGGTATCCGGGAAGTGTCTCTGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DKVTFSGQSAFR*RSGIREVSLVR Trigger: CCTCACCAGAGACACTTCCCGGATACCACTCCTCAACCGGAAGGCTGACTGCCCAGAAAATGTCACTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS CCA 72 bp | TGGGGGACTGTAGGGCACTTATCTTCAGAACGAGCTTaGGTGGAGTTCGGTACAGCATTTTTCTTCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WGTVGHLSSERA*VEFGTAFFFKG Trigger: GCCCTTGAAGAAAAATGCTGTACCGAACTCCACCCAAGCTCGTTCTGAAGATAAGTGCCCTACAGTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS TCA 72 bp | CCAAGACAATGGTGCTTTCTTGTCTTTGGACTGCTCTaGGTCCCTCTTGGAGGCAGCTGCCTCTTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PRQWCFLVFGLL*VPLGGSCLFLL Trigger: AAGAAGAAAGAGGCAGCTGCCTCCAAGAGGGACTCAGAGCAGTCCAAAGACAAGAAAGCACCATTGTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS GCA 72 bp | ACCTGGATGTCCCGACTCAGGAGCTTCTTGGTGAGATaGTTCAGTGACAAAGTGACATTTTCTGGGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TWMSRLRSFLVR*FSDKVTFSGQS Trigger: TGACTGCCCAGAAAATGTCACTTTGTCACTGAAGCATCTCACCAAGAAGCTCCTGAGTCGGGACATCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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| CDS CCA 72 bp | GATGAAAGTACTGTAGGGCTTTGTAGTCATTGTGAATaGCATGCCCTATCACTACCTTCCCTGAGAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: DESTVGLCSHCE*HALSLPSLRVS Trigger: AGATACTCTCAGGGAAGGTAGTGATAGGGCATGCCATTCACAATGACTACAAAGCCCTACAGTACTTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055984.7 |
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