Pregenerated sensors for ISG15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035692Ensembl transcript IDs: ENSMUST00000085425.6
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | GTGCTGCTGGGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTaGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGC | + |
Preference number: 5 (lower is better) Translates to: VLLGPRPRLERVRPS*STAVWWARRCWKAG Trigger: GCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCCCAGCAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 90 bp | GGGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTaGAGTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAAT | + |
Preference number: 5 (lower is better) Translates to: GTQTQTGKGKTVLEH*SLVGQALLESRHTN Trigger: ATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | CCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTaGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGGGCA | + |
Preference number: 5 (lower is better) Translates to: PRLERVRPSWSTAVW*ARRCWKAGTPIFWA Trigger: TGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | AGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTaGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGG | + |
Preference number: 5 (lower is better) Translates to: RPRLERVRPSWSTAV*WARRCWKAGTPIFW Trigger: CCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 90 bp | AGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTGGGCCAGGCGCTaGTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: RVRPSWSTAVWWARR*WKAGTPIFWAICFF Trigger: GAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 90 bp | TGCTGTGGCCCCTTTCGTTCCTCACCAGGATGCTCAGAGGCTCGCTaGAGTTCTGTACCACTAGCATCACTGTGCTGCTGGGACCCAGAC | + |
Preference number: 5 (lower is better) Translates to: CCGPFRSSPGCSEAR*SSVPLASLCCWDPD Trigger: GTCTGGGTCCCAGCAGCACAGTGATGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | GTAAGACCGTCCTGGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTaGAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTCAGT | + |
Preference number: 5 (lower is better) Translates to: VRPSWSTAVWWARRC*KAGTPIFWAICFFS Trigger: ACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 90 bp | GCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTaGTTCTTCAGTTCTGACACCGTCATGGAGTTAGTCACGGACACC | + |
Preference number: 5 (lower is better) Translates to: ARRCWKAGTPIFWAI*FFSSDTVMELVTDT Trigger: GGTGTCCGTGACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | AGCTCCTTGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTaGTCTTCGTGGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGC | + |
Preference number: 5 (lower is better) Translates to: SSLSSMGLPSKLSQN*SSWTCSRWDTFFLS Trigger: GCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | GTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTaGGCAATCTGCTTCTTCAGTTCTGACACCGTCATGGAGTTAGTC | + |
Preference number: 5 (lower is better) Translates to: VWWARRCWKAGTPIF*AICFFSSDTVMELV Trigger: GACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | TCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTaGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTCTACA | + |
Preference number: 5 (lower is better) Translates to: SSMGLPSKLSQNWSS*TCSRWDTFFLSVST Trigger: TGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 90 bp | AGACCTCATAGATGTTGCTGTGGCCCCTTTCGTTCCTCACCAGGATaGTCAGAGGCTCGCTGCAGTTCTGTACCACTAGCATCACTGTGC | + |
Preference number: 5 (lower is better) Translates to: RPHRCCCGPFRSSPG*SEARCSSVPLASLC Trigger: GCACAGTGATGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCTATGAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 90 bp | CCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTTGTTCCCGCTaGGACACCTTCTTCTTAAGCGTGTCTACAGTCTGCGTCAGAAAG | + |
Preference number: 5 (lower is better) Translates to: PSKLSQNWSSWTCSR*DTFFLSVSTVCVRK Trigger: CTTTCTGACGCAGACTGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS TCA 90 bp | GAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTCAGTTCTaGCACCGTCATGGAGTTAGTCACGGACACCAGGAAATCGTTACC | + |
Preference number: 5 (lower is better) Translates to: ESRHTNLLGNLLLQF*HRHGVSHGHQEIVT Trigger: GGTAACGATTTCCTGGTGTCCGTGACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | GGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTaGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTGG | + |
Preference number: 6 (lower is better) Translates to: GPRPRLERVRPS*STAVWWARRCW Trigger: CCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CAA 72 bp | CACTGGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTaGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAG | + |
Preference number: 6 (lower is better) Translates to: HWGFRPYSPSSS*SSMGLPSKLSQ Trigger: CTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | GAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTaGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATC | + |
Preference number: 6 (lower is better) Translates to: ERVRPSWSTAVW*ARRCWKAGTPI Trigger: GATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CAA 90 bp | CAGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTaGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTG | + |
Preference number: 6 (lower is better) Translates to: QTQTGKGKTVLEHCS*VGQALLESRHTNLL Trigger: CAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | TCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTaGTCTTCGTGGACTTGTTCCCGCTGGGACACCTTC | + |
Preference number: 6 (lower is better) Translates to: SSMGLPSKLSQN*SSWTCSRWDTF Trigger: GAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | CCACCCCTCAGGCGCAAATGCTTGATCACTGTGCACTaGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTTG | + |
Preference number: 6 (lower is better) Translates to: PPLRRKCLITVH*GFRPYSPSSSL Trigger: CAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTGCACAGTGATCAAGCATTTGCGCCTGAGGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CAA 90 bp | ATCACTGTGCACTGGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTaGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCT | + |
Preference number: 6 (lower is better) Translates to: ITVHWGFRPYSPSSS*SSMGLPSKLSQNWS Trigger: AGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTGCACAGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | GCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTaGGCAATCTGCTTCTTCAGTTCTGACACCGTCATG | + |
Preference number: 6 (lower is better) Translates to: ARRCWKAGTPIF*AICFFSSDTVM Trigger: CATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CCA 72 bp | GGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTaGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGC | + |
Preference number: 6 (lower is better) Translates to: GLPSKLSQNWSS*TCSRWDTFFLS Trigger: GCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CAA 90 bp | CATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTaGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTCTACAGTCTG | + |
Preference number: 6 (lower is better) Translates to: HGPSLEAQPELVFVD*FPLGHLLLKRVYSL Trigger: CAGACTGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 72 bp | AGATGTTGCTGTGGCCCCTTTCGTTCCTCACCAGGATaGTCAGAGGCTCGCTGCAGTTCTGTACCACTAGCA | + |
Preference number: 6 (lower is better) Translates to: RCCCGPFRSSPG*SEARCSSVPLA Trigger: TGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS CAA 72 bp | TCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTaGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTC | + |
Preference number: 6 (lower is better) Translates to: SLEAQPELVFVD*FPLGHLLLKRV Trigger: GACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 72 bp | TGCTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTaGTTCTTCAGTTCTGACACCGTCATGGAGTTAGTC | + |
Preference number: 6 (lower is better) Translates to: CWKAGTPIFWAI*FFSSDTVMELV Trigger: GACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |
||
CDS GCA 72 bp | TGTCTACAGTCTGCGTCAGAAAGACCTCATAGATGTTaGTGTGGCCCCTTTCGTTCCTCACCAGGATGCTCA | + |
Preference number: 6 (lower is better) Translates to: CLQSASERPHRC*CGPFRSSPGCS Trigger: TGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCTATGAGGTCTTTCTGACGCAGACTGTAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085425.6 |