RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ISG15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035692

Ensembl transcript IDs: ENSMUST00000085425.6

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GTGCTGCTGGGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTaGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGC +
Preference number: 5 (lower is better)
Translates to: VLLGPRPRLERVRPS*STAVWWARRCWKAG
Trigger: GCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCCCAGCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 90 bp GGGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTaGAGTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAAT +
Preference number: 5 (lower is better)
Translates to: GTQTQTGKGKTVLEH*SLVGQALLESRHTN
Trigger: ATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp CCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTaGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PRLERVRPSWSTAVW*ARRCWKAGTPIFWA
Trigger: TGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp AGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTaGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RPRLERVRPSWSTAV*WARRCWKAGTPIFW
Trigger: CCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 90 bp AGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTGGGCCAGGCGCTaGTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVRPSWSTAVWWARR*WKAGTPIFWAICFF
Trigger: GAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 90 bp TGCTGTGGCCCCTTTCGTTCCTCACCAGGATGCTCAGAGGCTCGCTaGAGTTCTGTACCACTAGCATCACTGTGCTGCTGGGACCCAGAC +
Preference number: 5 (lower is better)
Translates to: CCGPFRSSPGCSEAR*SSVPLASLCCWDPD
Trigger: GTCTGGGTCCCAGCAGCACAGTGATGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp GTAAGACCGTCCTGGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTaGAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VRPSWSTAVWWARRC*KAGTPIFWAICFFS
Trigger: ACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 90 bp GCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTaGTTCTTCAGTTCTGACACCGTCATGGAGTTAGTCACGGACACC +
Preference number: 5 (lower is better)
Translates to: ARRCWKAGTPIFWAI*FFSSDTVMELVTDT
Trigger: GGTGTCCGTGACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp AGCTCCTTGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTaGTCTTCGTGGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: SSLSSMGLPSKLSQN*SSWTCSRWDTFFLS
Trigger: GCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp GTTTGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTaGGCAATCTGCTTCTTCAGTTCTGACACCGTCATGGAGTTAGTC +
Preference number: 5 (lower is better)
Translates to: VWWARRCWKAGTPIF*AICFFSSDTVMELV
Trigger: GACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp TCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTaGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTCTACA +
Preference number: 5 (lower is better)
Translates to: SSMGLPSKLSQNWSS*TCSRWDTFFLSVST
Trigger: TGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 90 bp AGACCTCATAGATGTTGCTGTGGCCCCTTTCGTTCCTCACCAGGATaGTCAGAGGCTCGCTGCAGTTCTGTACCACTAGCATCACTGTGC +
Preference number: 5 (lower is better)
Translates to: RPHRCCCGPFRSSPG*SEARCSSVPLASLC
Trigger: GCACAGTGATGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCTATGAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 90 bp CCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTTGTTCCCGCTaGGACACCTTCTTCTTAAGCGTGTCTACAGTCTGCGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: PSKLSQNWSSWTCSR*DTFFLSVSTVCVRK
Trigger: CTTTCTGACGCAGACTGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS TCA 90 bp GAAAGCCGGCACACCAATCTTCTGGGCAATCTGCTTCTTCAGTTCTaGCACCGTCATGGAGTTAGTCACGGACACCAGGAAATCGTTACC +
Preference number: 5 (lower is better)
Translates to: ESRHTNLLGNLLLQF*HRHGVSHGHQEIVT
Trigger: GGTAACGATTTCCTGGTGTCCGTGACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp GGACCCAGACCCAGACTGGAAAGGGTAAGACCGTCCTaGAGCACTGCAGTTTGGTGGGCCAGGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GPRPRLERVRPS*STAVWWARRCW
Trigger: CCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CAA 72 bp CACTGGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTaGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: HWGFRPYSPSSS*SSMGLPSKLSQ
Trigger: CTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp GAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTTGGTaGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATC +
Preference number: 6 (lower is better)
Translates to: ERVRPSWSTAVW*ARRCWKAGTPI
Trigger: GATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CAA 90 bp CAGACCCAGACTGGAAAGGGTAAGACCGTCCTGGAGCACTGCAGTTaGGTGGGCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTG +
Preference number: 6 (lower is better)
Translates to: QTQTGKGKTVLEHCS*VGQALLESRHTNLL
Trigger: CAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGCCCACCAAACTGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp TCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTaGTCTTCGTGGACTTGTTCCCGCTGGGACACCTTC +
Preference number: 6 (lower is better)
Translates to: SSMGLPSKLSQN*SSWTCSRWDTF
Trigger: GAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp CCACCCCTCAGGCGCAAATGCTTGATCACTGTGCACTaGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: PPLRRKCLITVH*GFRPYSPSSSL
Trigger: CAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTGCACAGTGATCAAGCATTTGCGCCTGAGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CAA 90 bp ATCACTGTGCACTGGGGCTTTAGGCCATACTCCCCCAGCAGCTCCTaGTCCTCCATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCT +
Preference number: 6 (lower is better)
Translates to: ITVHWGFRPYSPSSS*SSMGLPSKLSQNWS
Trigger: AGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATGGAGGACAAGGAGCTGCTGGGGGAGTATGGCCTAAAGCCCCAGTGCACAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp GCCAGGCGCTGCTGGAAAGCCGGCACACCAATCTTCTaGGCAATCTGCTTCTTCAGTTCTGACACCGTCATG +
Preference number: 6 (lower is better)
Translates to: ARRCWKAGTPIF*AICFFSSDTVM
Trigger: CATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCAGCGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CCA 72 bp GGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTaGACTTGTTCCCGCTGGGACACCTTCTTCTTAAGC +
Preference number: 6 (lower is better)
Translates to: GLPSKLSQNWSS*TCSRWDTFFLS
Trigger: GCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CAA 90 bp CATGGGCCTTCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTaGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTCTACAGTCTG +
Preference number: 6 (lower is better)
Translates to: HGPSLEAQPELVFVD*FPLGHLLLKRVYSL
Trigger: CAGACTGTAGACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGAAGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 72 bp AGATGTTGCTGTGGCCCCTTTCGTTCCTCACCAGGATaGTCAGAGGCTCGCTGCAGTTCTGTACCACTAGCA +
Preference number: 6 (lower is better)
Translates to: RCCCGPFRSSPG*SEARCSSVPLA
Trigger: TGCTAGTGGTACAGAACTGCAGCGAGCCTCTGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS CAA 72 bp TCCCTCGAAGCTCAGCCAGAACTGGTCTTCGTGGACTaGTTCCCGCTGGGACACCTTCTTCTTAAGCGTGTC +
Preference number: 6 (lower is better)
Translates to: SLEAQPELVFVD*FPLGHLLLKRV
Trigger: GACACGCTTAAGAAGAAGGTGTCCCAGCGGGAACAAGTCCACGAAGACCAGTTCTGGCTGAGCTTCGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 72 bp TGCTGGAAAGCCGGCACACCAATCTTCTGGGCAATCTaGTTCTTCAGTTCTGACACCGTCATGGAGTTAGTC +
Preference number: 6 (lower is better)
Translates to: CWKAGTPIFWAI*FFSSDTVMELV
Trigger: GACTAACTCCATGACGGTGTCAGAACTGAAGAAGCAGATTGCCCAGAAGATTGGTGTGCCGGCTTTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6
CDS GCA 72 bp TGTCTACAGTCTGCGTCAGAAAGACCTCATAGATGTTaGTGTGGCCCCTTTCGTTCCTCACCAGGATGCTCA +
Preference number: 6 (lower is better)
Translates to: CLQSASERPHRC*CGPFRSSPGCS
Trigger: TGAGCATCCTGGTGAGGAACGAAAGGGGCCACAGCAACATCTATGAGGTCTTTCTGACGCAGACTGTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085425.6