Pregenerated sensors for ISCU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025825Ensembl transcript IDs: ENSMUST00000026937.12, ENSMUST00000112311.8, ENSMUST00000112312.8, ENSMUST00000123616.8, ENSMUST00000134881.2, ENSMUST00000145592.2, ENSMUST00000145778.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGGGAAGAGCTGCCTGTCTCAGCTGCCCGGCCACCGTGGGGTaGGAACAGCAGACTCTGAACAGATCCAAGCTGCCTGGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GGGRAACLSCPATVG*EQQTLNRSKLPGRW Trigger: CCACCTGCCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGCTGAGACAGGCAGCTCTTCCCCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR TCA 90 bp | CCTGTCTCAGCTGCCCGGCCACCGTGGGGTGGGAACAGCAGACTCTaGACAGATCCAAGCTGCCTGGCAGGTGGGGCAGACTCACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVSAARPPWGGNSRL*TDPSCLAGGADSLE Trigger: CTCCAGTGAGTCTGCCCCACCTGCCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGCTGAGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR TCA 90 bp | CTGCAGCCCCACACTGGAAGGCTAGTACTGAGAGGATACCGAGGGTaGGGCTATGGGCGAAGCAGAAGCCGAGAGCTGGAAGGGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LQPHTGRLVLRGYRG*GYGRSRSRELEGGR Trigger: TCTGCCCCCTTCCAGCTCTCGGCTTCTGCTTCGCCCATAGCCTCACCCTCGGTATCCTCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CCA 90 bp | CACCGTGGGGTGGGAACAGCAGACTCTGAACAGATCCAAGCTGCCTaGCAGGTGGGGCAGACTCACTGGAGCAGTGCAGTTTCACAGGCG | + |
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Preference number: 1 (lower is better) Translates to: HRGVGTADSEQIQAA*QVGQTHWSSAVSQA Trigger: CGCCTGTGAAACTGCACTGCTCCAGTGAGTCTGCCCCACCTGCCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR CCA 90 bp | CCACACTGGAAGGCTAGTACTGAGAGGATACCGAGGGTGAGGCTATaGGCGAAGCAGAAGCCGAGAGCTGGAAGGGGGCAGAAAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PHWKASTERIPRVRL*AKQKPRAGRGQKAE Trigger: CTCAGCTTTCTGCCCCCTTCCAGCTCTCGGCTTCTGCTTCGCCCATAGCCTCACCCTCGGTATCCTCTCAGTACTAGCCTTCCAGTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR GCA 90 bp | GTGAGGGTATTGCAGAGAGTGCTTGTCACCTGGCAGCAGTCTGCATaGCTCCTGCTGCAGCCCCACACTGGAAGGCTAGTACTGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: VRVLQRVLVTWQQSA*LLLQPHTGRLVLRG Trigger: TCCTCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTGCCAGGTGACAAGCACTCTCTGCAATACCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CCA 90 bp | TTTCTGGCTGGAACAGTGAGGGTATTGCAGAGAGTGCTTGTCACCTaGCAGCAGTCTGCATGCCTCCTGCTGCAGCCCCACACTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: FLAGTVRVLQRVLVT*QQSACLLLQPHTGR Trigger: CCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTGCCAGGTGACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CCA 90 bp | AGCTGCTGTGACTGGCTGGAGTGTCTCCAGGGCTCACTGCTTCTCTaGCTCCTCCTTCTTGGACTCTTGCTTCAGTTTGTAGTCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SCCDWLECLQGSLLL*LLLLGLLLQFVVSQ Trigger: CTGGCTGACTACAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAGAGAAGCAGTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112312.8 ENSMUST00000145778.8 |
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| 3UTR TCA 90 bp | ATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLWMVVSHHVVAGI*TPDLWKSSWVLLPT Trigger: AGTGGGTAAGAGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CCA 90 bp | GAGTCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTTGGAAGAGCAGTTGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLIMDGCEPPCGC*DLNSGPLEEQLGAL Trigger: AAGAGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR GCA 90 bp | GTGCTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACACTAACTaGACTAAGGACACACGTGAGCTGAAAGGAACACGGGATCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VLISVPGHKLNQDTN*TKDTRELKGTRDQV Trigger: CACCTGATCCCGTGTTCCTTTCAGCTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR CCA 90 bp | AATACCTATCTATTTAGAATACGTATGCTTGTGCTTGTATGTGAGTaGCTGAATGTGCTTGGGCATGCGTGGTGGTCACAGGACAACTTT | + |
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Preference number: 1 (lower is better) Translates to: NTYLFRIRMLVLVCE*LNVLGHAWWSQDNF Trigger: AAAGTTGTCCTGTGACCACCACGCATGCCCAAGCACATTCAGCCACTCACATACAAGCACAAGCATACGTATTCTAAATAGATAGGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGGCCACCGTGGGGTGGGAACAGCAGACTCTGAACAGATCCAAGCTGCCTGGAGGAGCTGGAGGCAATaGCGGAGCCGCAGCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: PGHRGVGTADSEQIQAAWRSWRQ*RSRSQM Trigger: CATTTGGCTGCGGCTCCGCCATTGCCTCCAGCTCCT...CCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGCAGACTGGGGAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGCTGCGACTCACTGGAGCAGTaGAGTTTCACAGGCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QRQTGEAQGGGRAACLSCDSLEQ*SFTGGR Trigger: CCTGCCGCCTGTGAAACTGCACTGCTCCAGTGAGTC...GCAGCTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCAGTCTGCCTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCAGCTGCTGTGACTGGCTGGAGTGTCTCCAGGGCTCACTGCTTCTCTGGAGGAAGCAGCTGCTGTaGCTGGCTGGAGTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GSSCCDWLECLQGSLLLWRKQLL*LAGVSP Trigger: TGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCCT...CCAGAGAAGCAGTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112312.8 ENSMUST00000145778.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGGCGGCTCACTGCTTCTCTaGCTCCTCCTTCTTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: HRRQAELLGDVGVFDGQGGSLLL*LLLLGL Trigger: GAGTCCAAGAAGGAGGAGCCAGAGAAGCAGTGAGCC...GCCCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGCAGCCAGGGCGGCCTTaGTGGCGTCTTCTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ILSDSQHKALCWQSTSGQQPGRP*WRLLPA Trigger: TGCTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTG...CTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGGTCTCCAGGGCTCACTaGTTCTCTGGCTCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQVSRAH*FSGSSF Trigger: GAAGGAGGAGCCAGAGAAGCAGTGAGCCCTGGAGAC...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112312.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCAGCTGCTGTGACTGGCTGGAGTGTCTCCAGGGCTCACTGCTTCTCTGGCTTGATGGCGTCTTCTaGCAGCATTCTGCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GSSCCDWLECLQGSLLLWLDGVF*QHSAFW Trigger: CCAGAAAGCAGAATGCTGGCAGAAGACGCCATCAAG...CCAGAGAAGCAGTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTCCGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACTGGCAGCAGTCTGCATaGCTCCTGCTGCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: WLLGFELRTFGRAVGCSYWQQSA*LLLQPH Trigger: GTGGGGCTGCAGCAGGAGGCATGCAGACTGCTGCCA...GTAAGAGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGGGCTCACTGCTTCTCTaGCTCCTCCTTCTTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQGSLLL*LLLLGL Trigger: GAGTCCAAGAAGGAGGAGCCAGAGAAGCAGTGAGCC...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112312.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTAGCTGCTGTGACTGGCTaGAGTGTCTCCAGGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LSDSQHKALCWQSTSGQVAAVTG*SVSRAH Trigger: GTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGC...TACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| 3UTR-3UTR CCA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGCCTTTACCCACTCTGTaGCTAAGGAGCTGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRPLPTL*LRSWRQ Trigger: TTGCCTCCAGCTCCTTAGCCACAGAGTGGGTAAAGG...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGCTGGCTCCTCCTTCTTaGACTCTTGCTTCAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRLAPPS*TLASVC Trigger: ACAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAG...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCGAGGAAGCAGCTGCTGTaGCTGGCTGGAGTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: IYLRSGTSPCHSPELKTSRKQLL*LAGVSP Trigger: TGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCCT...CGAAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR CCA 90 bp | TCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCGGGGCTCACTGCTTCTCTaGCTCCTCCTTCTTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: STSGQVQVLVTLQSLRLRGSLLL*LLLLGL Trigger: GAGTCCAAGAAGGAGGAGCCAGAGAAGCAGTGAGCC...CCGAAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| 3UTR CAA 90 bp | GATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLIMDGCEPPCGCWD*NSGPLEEQLGALTH Trigger: GTGGGTAAGAGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTAATAGATCCTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTAGTCTCCAGGGCTCACTaGTTCTCTGGCTCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSNRSYQIASIRRSAGNLVSRAH*FSGSSF Trigger: GAAGGAGGAGCCAGAGAAGCAGTGAGCCCTGGAGAC...TAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAGGATCTATTACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGATTTTGTGCAAGTGGTaGATAGTGTGCGTTTTGCGT | + |
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Preference number: 2 (lower is better) Translates to: ALCWQSTSGQVQVLVTLQILCKW*IVCVLR Trigger: ACGCAAAACGCACACTATTCACCACTTGCACAAAAT...CTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGTGCGTTTTGCGTAGCTTCTTTGATGTGCAGGGTGGCAGGAAGCAGCTGCTGGCTCCTCCTTCTTaGACTCTTGCTTCAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IVCVLRSFFDVQGGRKQLLAPPS*TLASVC Trigger: ACAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAG...CAGCTGCTTCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAACGCACACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112312.8 ENSMUST00000145778.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACACACGTGAGTTAAGACTTCGGTGCTaGTTTCAGTCCCAGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: VPGHKLNQDTNCTKDTRELRLRC*FQSQAT Trigger: TGTGGCCTGGGACTGAAATCAGCACCGAAGTCTTAA...CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGCTGGGATTTGAACTCCGGACCTTTGGAAGAGCAGTTGGGTGCTCTTACGTTCTAACTCAGGCTTaGTGGCAAGTTGTTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: WLLGFELRTFGRAVGCSYVLTQA*WQVVTW Trigger: CCAAGTAACAACTTGCCACCAAGCCTGAGTTAGAAC...GTAAGAGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTAATCAAGACACTAACTaGACTAAGGACACACGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SAGNLPQVRYKSLSLSRANQDTN*TKDTRE Trigger: CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATT...AGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATAAATACCTATCTATTTAGAATACGTATGCTTGTGCTTGTATGTGAGTGGGCCATCTCCCTGGCCTaGGAGGCGGGCTTAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GINTYLFRIRMLVLVCEWAISLA*EAGLRK Trigger: CTTCCTTAAGCCCGCCTCTCAGGCCAGGGAGATGGC...CCACTCACATACAAGCACAAGCATACGTATTCTAAATAGATAGGTATTTATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACACACGTGAGATTTTGTGCAAGTGGTaGATAGTGTGCGTTTTGCGT | + |
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Preference number: 2 (lower is better) Translates to: VPGHKLNQDTNCTKDTREILCKW*IVCVLR Trigger: ACGCAAAACGCACACTATTCACCACTTGCACAAAAT...CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACAATCAAGACACTAACTaGACTAAGGACACACGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LISVPGHKLNQDTNCTKDNQDTN*TKDTRE Trigger: CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATT...GTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATAAATACCTATCTATTTAGAATACGTATGCTTGTGCTTGTATGTGAGTGGAGTCAGATCTCATTATaGATGGTTGTGAGCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: GINTYLFRIRMLVLVCEWSQISL*MVVSHH Trigger: ATGGTGGCTCACAACCATCCATAATGAGATCTGACT...CCACTCACATACAAGCACAAGCATACGTATTCTAAATAGATAGGTATTTATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR GCA 72 bp | GAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGCTaGCCGGCCACCGTGGGGTGGGAACAGCAGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: EAQGGGRAACLS*PATVGWEQQTL Trigger: CAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGCTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR TCA 72 bp | GCTGCCCGGCCACCGTGGGGTGGGAACAGCAGACTCTaGACAGATCCAAGCTGCCTGGCAGGTGGGGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: AARPPWGGNSRL*TDPSCLAGGAD Trigger: GTCTGCCCCACCTGCCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR-3UTR CAA 90 bp | CCCGGCCACCGTGGGGTGGGAACAGCAGACTCTGAACAGATCCAAGCTGCCTGGGGCAGGCAGAGCTCCTaGGCGATGTCGGTGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: PGHRGVGTADSEQIQAAWGRQSS*AMSVFL Trigger: CAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCC...CCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR CCA 72 bp | AGAGCTGCCTGTCTCAGCTGCCCGGCCACCGTGGGGTaGGAACAGCAGACTCTGAACAGATCCAAGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RAACLSCPATVG*EQQTLNRSKLP Trigger: AGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGCTGAGACAGGCAGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR CCA 72 bp | GCAGCAGTCTGCATGCCTCCTGCTGCAGCCCCACACTaGAAGGCTAGTACTGAGAGGATACCGAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AAVCMPPAAAPH*KASTERIPRVR Trigger: CCTCACCCTCGGTATCCTCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAAAGGCAGACTGGGGAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGGCGATGTCGGTGTTTTaGATGGTCAGGGCTTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TAKADWGSAGWGKSCLSQAMSVF*MVRASS Trigger: GGAGGAAGCCCTGACCATCAAAAACACCGACATCGC...CTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCAGTCTGCCTTTGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGGGCAGGCAGAGCTCCTaGGCGATGTCGGTGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQGRQSS*AMSVFL Trigger: CAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCC...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
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| 3UTR GCA 72 bp | TTGCAGAGAGTGCTTGTCACCTGGCAGCAGTCTGCATaGCTCCTGCTGCAGCCCCACACTGGAAGGCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: LQRVLVTWQQSA*LLLQPHTGRLV Trigger: TACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTGCCAGGTGACAAGCACTCTCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGGCGATGTCGGTGTTTTaGATGGTCAGGGCTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQAMSVF*MVRASS Trigger: GGAGGAAGCCCTGACCATCAAAAACACCGACATCGC...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
||
| 3UTR TCA 72 bp | CACACTGGAAGGCTAGTACTGAGAGGATACCGAGGGTaGGGCTATGGGCGAAGCAGAAGCCGAGAGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTGRLVLRGYRG*GYGRSRSRELE Trigger: TTCCAGCTCTCGGCTTCTGCTTCGCCCATAGCCTCACCCTCGGTATCCTCTCAGTACTAGCCTTCCAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGCTGCTGTGACTGGCTGGAGTGTCTCCAGGGCTCACTGCTTCTCTTTTTGCGTAGCTTCTTaGATGTGCAGGGTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QEAAAVTGWSVSRAHCFSFCVAS*MCRVAG Trigger: TCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAA...AGAGAAGCAGTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112312.8 ENSMUST00000145778.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCAGTGTGGTAGGTAGTGCACTGTGGCCTCAGGCACTGCAGACACACTCACCGCAGCCAAATGTTTaGAATCTGGCGTCCACAATC | + |
|
Preference number: 3 (lower is better) Translates to: WGSVVGSALWPQALQTHSPQPNV*NLASTI Trigger: GATTGTGGACGCCAGATTCAAAACATTTGGCTGCGG...TGAGTGTGTCTGCAGTGCCTGAGGCCACAGTGCACTACCTACCACACTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
||
| 3UTR CCA 72 bp | CACCAGACCCCGGGTTTAGAAGTTCTAACTCAGGCTTaGTGGCAAGTTGTTACTTGGGCCATCTCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HQTPGLEVLTQA*WQVVTWAISLA Trigger: GGCCAGGGAGATGGCCCAAGTAACAACTTGCCACCAAGCCTGAGTTAGAACTTCTAAACCCGGGGTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGTCTGGCTCCTCCTTCTaGGACTCTTGCTTCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRSGSSF*DSCFSL Trigger: CAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAGA...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
||
| 3UTR TCA 72 bp | GAAGCAGAAGCCGAGAGCTGGAAGGGGGCAGAAAGCTaGGCATGTCAGGGTGACGTCTTACTTCTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EAEAESWKGAES*ACQGDVLLLLS Trigger: AGAAAGCAGAAGTAAGACGTCACCCTGACATGCTCAGCTTTCTGCCCCCTTCCAGCTCTCGGCTTCTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR TCA 72 bp | GGACCTTTGGAAGAGCAGTTGGGTGCTCTTACCCACTaGGCCATCTCACCAGACCCCGGGTTTAGAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GPLEEQLGALTH*AISPDPGFRSS Trigger: AGAACTTCTAAACCCGGGGTCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTCTTCCAAAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR TCA 72 bp | ACTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTaGTGGCGTCTTCTGCCAGCATTCTGCTTTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLASVCSQPGRP*WRLLPAFCFLE Trigger: TTCCAGAAAGCAGAATGCTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTACTCTGGCTCCTCCTTCTaGGACTCTTGCTTCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YQIASIRRSAGNLPQVRYSGSSF*DSCFSL Trigger: CAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAGA...GTACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
||
| 3UTR TCA 72 bp | TGGTGGCAAGTTGTTACTTGGGCCATCTCCCTGGCCTaGGAGGCGGGCTTAAGGAAGAGAACCTTTTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WWQVVTWAISLA*EAGLRKRTFLS Trigger: ACTTAAAAAGGTTCTCTTCCTTAAGCCCGCCTCTCAGGCCAGGGAGATGGCCCAAGTAACAACTTGCCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR GCA 72 bp | GATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLIMDGCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR CCA 72 bp | CTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTTGGAAGAGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LIMDGCEPPCGC*DLNSGPLEEQL Trigger: CAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR TCA 72 bp | ATCAAGACACTAACTGCACTAAGGACACACGTGAGCTaGAAGGAACACGGGATCAGGTGTAATCAACGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IKTLTALRTHVS*KEHGIRCNQRH Trigger: GTGCCGTTGATTACACCTGATCCCGTGTTCCTTTCAGCTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| 3UTR GCA 72 bp | TCAGTCCCAGGCCACAAACTAAATCAAGACACTAACTaGACTAAGGACACACGTGAGCTGAAAGGAACACGG | + |
|
Preference number: 3 (lower is better) Translates to: SVPGHKLNQDTN*TKDTRELKGTR Trigger: CCGTGTTCCTTTCAGCTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTTTTTGCGTAGCTTCTTaGATGTGCAGGGTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSTSGQVQVLVTLQSLRLFCVAS*MCRVAG Trigger: TCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAA...AAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACTTTTGCGTAGCTTCTTaGATGTGCAGGGTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LISVPGHKLNQDTNCTKDFCVAS*MCRVAG Trigger: TCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAA...GTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| 3UTR CCA 72 bp | CTATTTAGAATACGTATGCTTGTGCTTGTATGTGAGTaGCTGAATGTGCTTGGGCATGCGTGGTGGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LFRIRMLVLVCE*LNVLGHAWWSQ Trigger: CTGTGACCACCACGCATGCCCAAGCACATTCAGCCACTCACATACAAGCACAAGCATACGTATTCTAAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR CCA 72 bp | GAGGCGGGCTTAAGGAAGAGAACCTTTTTAAGTTGGTaGGTACTAGAGTCAGGAAGATTCAAGAGTGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: EAGLRKRTFLSW*VLESGRFKSVL Trigger: TAGCACACTCTTGAATCTTCCTGACTCTAGTACCCACCAACTTAAAAAGGTTCTCTTCCTTAAGCCCGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| 3UTR TCA 72 bp | ATCAGGTGTAATCAACGGCACATTTTGTGCAAGTGGTaGATAGTGTGCGTTTTGCGTAGCTTCTTTGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: IRCNQRHILCKW*IVCVLRSFFDV Trigger: CACATCAAAGAAGCTACGCAAAACGCACACTATTCACCACTTGCACAAAATGTGCCGTTGATTACACCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGCCTGTCTCAGCTGCCCGGCCACCGTGGGGTGGGAACAGCAGACTCTGTTGGGACACTCGGAGTaGCGGCCGCGGCGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAACLSCPATVGWEQQTLLGHSE*RPRRGR Trigger: TCTGCCCCGCCGCGGCCGTCACTCCGAGTGTCCCAA...CAGAGTCTGCTGTTCCCACCCCACGGTGGCCGGGCAGCTGAGACAGGCAGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGCAGACTGGGGAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGCTGCTGGGCTGTCAGCCTTaGGACACTCGGAGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKADWGSAGWGKSCLSQLLGCQP*DTRSDG Trigger: GCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAG...CAGCTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCAGTCTGCCTTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGCAGACTGGGGAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGCTGCCGGACCCTCCCTTCTaGGCTGTCAGCCTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AKADWGSAGWGKSCLSQLPDPPF*AVSLGT Trigger: TGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGG...CAGCTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCAGTCTGCCTTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
||
| CDS-3UTR TCA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGTTGGGACACTCGGAGTaGCGGCCGCGGCGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRLGHSE*RPRRGR Trigger: TCTGCCCCGCCGCGGCCGTCACTCCGAGTGTCCCAA...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCTGCATGCCTCCTGCTGCAGCCCCACACTGGAAGGCTAGTACTGAGAGGGTGGGGGAAGAGCTaGCTGTCTCAGCTGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QQSACLLLQPHTGRLVLRGWGKS*LSQLPG Trigger: GCCGGGCAGCTGAGACAGGCAGCTCTTCCCCCACCC...TCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAAAGGCAGACTGGGGAAGCGCAGGGTGGGGGAAGAGCTGCCTGTCTCAGCATGACGTCACCACATaGCGGAGCCCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TAKADWGSAGWGKSCLSQHDVTT*RSPHQS Trigger: GGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATG...CTGAGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCAGTCTGCCTTTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGCTGCTGTGACTGGCTGGAGTGTCTCCAGGGCTCACTGCTTCTCTGGCCGGACCCTCCCTTCTaGGCTGTCAGCCTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCCDWLECLQGSLLLWPDPPF*AVSLGT Trigger: TGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGG...CCAGAGAAGCAGTGAGCCCTGGAGACACTCCAGCCAGTCACAGCAGCTGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145778.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCGTTTTGCGTAGCTTCTTTGATGTGCAGGGTGGCAGGAAGCAGCTGCTGTTTGGGACACTCGGAGTaGCGGCCGCGGCGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAFCVASLMCRVAGSSCCLGHSE*RPRRGR Trigger: TCTGCCCCGCCGCGGCCGTCACTCCGAGTGTCCCAA...ACAGCAGCTGCTTCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAACGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145778.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGGCCATGACGTCACCACATaGCGGAGCCCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRQAELLGDVGVFDGQGHDVTT*RSPHQS Trigger: GGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATG...GCCCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCTGCATGCCTCCTGCTGCAGCCCCACACTGGAAGGCTAGTACTGAGACATGACGTCACCACATaGCGGAGCCCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QQSACLLLQPHTGRLVLRHDVTT*RSPHQS Trigger: GGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATG...TCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGTGGGGAAGCGCAGGGTaGGGGAAGAGCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQWGSAG*GKSCLS Trigger: AGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCA...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGCTGGGCTGTCAGCCTTaGGACACTCGGAGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRLGCQP*DTRSDG Trigger: GCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAG...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 |
||
| CDS-3UTR CCA 90 bp | GGACTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCTGGGCTGTCAGCCTTaGGACACTCGGAGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLLQFVVSQGGLDGVFCLGCQP*DTRSDG Trigger: GCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAG...GCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134881.2 ENSMUST00000145778.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGCGGCAGGCAGAGCTCCTTGGCGATGTCGGTGTTTTTGATGGTCAGGCCGGACCCTCCCTTCTaGGCTGTCAGCCTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FTGGRQSSLAMSVFLMVRPDPPF*AVSLGT Trigger: TGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGG...CCTGACCATCAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCCGCCTGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 |
||
| CDS-3UTR TCA 90 bp | GCCCCACACTGGAAGGCTAGTACTGAGAGGATACCGAGGGTGAGGCTATGGGCGGGATCTGCAGTTTCATaGCGTCACCACATGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APHWKASTERIPRVRLWAGSAVS*RHHMPE Trigger: CTCCGGCATGTGGTGACGTCATGAAACTGCAGATCC...CGCCCATAGCCTCACCCTCGGTATCCTCTCAGTACTAGCCTTCCAGTGTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR GCA 90 bp | CTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTAGGGTGGGGGAAGAGCTaGCTGTCTCAGCTGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSDSQHKALCWQSTSGQVGWGKS*LSQLPG Trigger: GCCGGGCAGCTGAGACAGGCAGCTCTTCCCCCACCC...TACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTCAGCCAGGGCGGCCTTaGTGGCGTCTTCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGNLPQVRYKSLSLSRAQPGRP*WRLLPA Trigger: TGCTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTG...AGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026937.12 |
||
| CDS-3UTR GCA 90 bp | CGCTCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGACATGACGTCACCACATaGCGGAGCCCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAGNLPQVRYKSLSLSRHDVTT*RSPHQS Trigger: GGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATG...TCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| CDS-3UTR CCA 90 bp | CGCTCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAAGGAGCTGGAGGCAATaGCGGAGCCGCAGCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSAGNLPQVRYKSLSLSRRSWRQ*RSRSQM Trigger: CATTTGGCTGCGGCTCCGCCATTGCCTCCAGCTCCT...TCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTCATGACGTCACCACATaGCGGAGCCCCCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGNLPQVRYKSLSLSRAHDVTT*RSPHQS Trigger: GGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATG...AGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| CDS-3UTR GCA 90 bp | GCACACCTTTCTGGCTGGAACAGTGAGGGTATTGCAGAGAGTGCTTGTCACCTGGACTCACTGGAGCAGTaGAGTTTCACAGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHLSGWNSEGIAESACHLDSLEQ*SFTGGR Trigger: CCTGCCGCCTGTGAAACTGCACTGCTCCAGTGAGTC...CAGGTGACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAAGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTACAAAAGCTGCCTGGCAGGTaGGGCAGACTCACTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDSQHKALCWQSTSGQVQKLPGR*GRLTGA Trigger: TGCTCCAGTGAGTCTGCCCCACCTGCCAGGCAGCTT...TTGTACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
||
| CDS-3UTR TCA 90 bp | GCGTTTTGCGTAGCTTCTTTGATGTGCAGGGTGGCAGGAAGCAGCTGCTGTGACCGATGTCGGTGTTTTTaGTGGTCAGGGCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFCVASLMCRVAGSSCCDRCRCF*WSGLPP Trigger: TGGAGGAAGCCCTGACCATCAAAAACACCGACATCG...GTCACAGCAGCTGCTTCCTGCCACCCTGCACATCAAAGAAGCTACGCAAAACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGGAAGGGGGCAGAAAGCTGAGCATGTCAGGGTGACGTCTTACTTCTGCCGATGTCGGTGTTTTTaGTGGTCAGGGCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGRGQKAEHVRVTSYFCRCRCF*WSGLPP Trigger: TGGAGGAAGCCCTGACCATCAAAAACACCGACATCG...GCAGAAGTAAGACGTCACCCTGACATGCTCAGCTTTCTGCCCCCTTCCAGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR GCA 90 bp | GCACACCTTTCTGGCTGGAACAGTGAGGGTATTGCAGAGAGTGCTTGTCACCTGTGTGGCCTCAGGCACTaGAGACACACTCAGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AHLSGWNSEGIAESACHLCGLRH*RHTQRQ Trigger: CTGTCTCTGAGTGTGTCTGCAGTGCCTGAGGCCACA...CAGGTGACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAAGGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR CCA 90 bp | TACTTGCACACCTTTCTGGCTGGAACAGTGAGGGTATTGCAGAGAGTGCTTGTCAGGAGCTGGAGGCAATaGCGGAGCCGCAGCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: YLHTFLAGTVRVLQRVLVRSWRQ*RSRSQM Trigger: CATTTGGCTGCGGCTCCGCCATTGCCTCCAGCTCCT...GACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAAGGTGTGCAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGAAGGGGGCAGAAAGCTGAGCATGTCAGGGTGACGTCTTACTTCTGCCCTTTACCCACTCTGTaGCTAAGGAGCTGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAGRGQKAEHVRVTSYFCPLPTL*LRSWRQ Trigger: TTGCCTCCAGCTCCTTAGCCACAGAGTGGGTAAAGG...GCAGAAGTAAGACGTCACCCTGACATGCTCAGCTTTCTGCCCCCTTCCAGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CCA 90 bp | AGATCCTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCGTGGGGCAGACTCACTaGAGCAGTGCAGTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: RSYQIASIRRSAGNLPQVVGQTH*SSAVSQ Trigger: CTGTGAAACTGCACTGCTCCAGTGAGTCTGCCCCAC...GACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| CDS-3UTR CCA 90 bp | GTGGGTACTAGAGTCAGGAAGATTCAAGAGTGTGCTACTTGCACACCTTTCTGGAAGCTGCCTGGCAGGTaGGGCAGACTCACTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGTRVRKIQECATCTPFWKLPGR*GRLTGA Trigger: TGCTCCAGTGAGTCTGCCCCACCTGCCAGGCAGCTT...CCAGAAAGGTGTGCAAGTAGCACACTCTTGAATCTTCCTGACTCTAGTACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CAA 72 bp | TACTTGCACACCTTTCTGGCTGGAACAGTGAGGGTATaGCAGAGAGTGCTTGTCACCTGGCAGCAGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YLHTFLAGTVRV*QRVLVTWQQSA Trigger: TGCAGACTGCTGCCAGGTGACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAAGGTGTGCAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CAA 72 bp | ATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTTGGAAGAGCAGTTGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MDGCEPPCGCWD*NSGPLEEQLGA Trigger: AGCACCCAACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CCA 90 bp | GAGCTTAAGACTTCGGTGCTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACAGGAGCTGGAGGCAATaGCGGAGCCGCAGCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: ELKTSVLISVPGHKLNQDRSWRQ*RSRSQM Trigger: CATTTGGCTGCGGCTCCGCCATTGCCTCCAGCTCCT...GTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAGCACCGAAGTCTTAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR TCA 90 bp | GTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACACACGTGAGGGATCTGCAGTTTCATaGCGTCACCACATGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPGHKLNQDTNCTKDTREGSAVS*RHHMPE Trigger: CTCCGGCATGTGGTGACGTCATGAAACTGCAGATCC...CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CCA 90 bp | TCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCGGCCTTTACCCACTCTGTaGCTAAGGAGCTGGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: STSGQVQVLVTLQSLRLRPLPTL*LRSWRQ Trigger: TTGCCTCCAGCTCCTTAGCCACAGAGTGGGTAAAGG...CCGAAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CCA 90 bp | GTGGGTACTAGAGTCAGGAAGATTCAAGAGTGTGCTACTTGCACACCTTTCTGGGTGGGGCAGACTCACTaGAGCAGTGCAGTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: VGTRVRKIQECATCTPFWVGQTH*SSAVSQ Trigger: CTGTGAAACTGCACTGCTCCAGTGAGTCTGCCCCAC...CCAGAAAGGTGTGCAAGTAGCACACTCTTGAATCTTCCTGACTCTAGTACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTAATAGATCCTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTAGGATCTGCAGTTTCATaGCGTCACCACATGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSNRSYQIASIRRSAGNLGSAVS*RHHMPE Trigger: CTCCGGCATGTGGTGACGTCATGAAACTGCAGATCC...TAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAGGATCTATTACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR GCA 90 bp | CTCAGTAATAGATCCTATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACTTGATGGCGTCTTCTaGCAGCATGGAGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSNRSYQIASIRRSAGNLLDGVF*QHGAVQ Trigger: CTGCACTGCTCCATGCTGGCAGAAGACGCCATCAAG...TAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATAGGATCTATTACTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026937.12 |
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| CDS-3UTR GCA 90 bp | CTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACGACTCACTGGAGCAGTaGAGTTTCACAGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LISVPGHKLNQDTNCTKDDSLEQ*SFTGGR Trigger: CCTGCCGCCTGTGAAACTGCACTGCTCCAGTGAGTC...GTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| CDS-3UTR GCA 90 bp | CAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTTGTGGCCTCAGGCACTaGAGACACACTCAGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QSTSGQVQVLVTLQSLRLCGLRH*RHTQRQ Trigger: CTGTCTCTGAGTGTGTCTGCAGTGCCTGAGGCCACA...AAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| CDS-3UTR CCA 90 bp | CAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCTGGCTCCTCCTTCTTaGACTCTTGCTTCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSTSGQVQVLVTLQSLRLLAPPS*TLASVC Trigger: ACAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAG...AAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026937.12 |
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| CDS-3UTR CCA 90 bp | GGTATAAATACCTATCTATTTAGAATACGTATGCTTGTGCTTGTATGTGAGTGGTGGGGAAGCGCAGGGTaGGGGAAGAGCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GINTYLFRIRMLVLVCEWWGSAG*GKSCLS Trigger: AGACAGGCAGCTCTTCCCCCACCCTGCGCTTCCCCA...CCACTCACATACAAGCACAAGCATACGTATTCTAAATAGATAGGTATTTATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| 3UTR CAA 72 bp | CTGAGAGGCGGGCTTAAGGAAGAGAACCTTTTTAAGTaGGTGGGTACTAGAGTCAGGAAGATTCAAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LRGGLKEENLFK*VGTRVRKIQEC Trigger: ACACTCTTGAATCTTCCTGACTCTAGTACCCACCAACTTAAAAAGGTTCTCTTCCTTAAGCCCGCCTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS CCA 90 bp | GTTCGCGCACCCCCTCGCCCGCCCATACCTTCTTGTGGTAGAGCCTaGCCGGAGCCGACAGCTCCCGGGCGGGCAGGCGCGGGCTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: VRAPPRPPIPSCGRA*PEPTAPGRAGAGSA Trigger: TGCGGAGCCCGCGCCTGCCCGCCCGGGAGCTGTCGGCTCCGGCCAGGCTCTACCACAAGAAGGTATGGGCGGGCGAGGGGGTGCGCGAAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| CDS CCA 90 bp | CATAATGATCCACAACCCGGACCCTCCCTTCTGGGCTGTCAGCCTTaGGACACTCGGAGTGACGGCCGCGGCGGGGCAGAGGCGGCCGNN | + |
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Preference number: 5 (lower is better) Translates to: HNDPQPGPSLLGCQP*DTRSDGRGGAEAAX Trigger: NNCGGCCGCCTCTGCCCCGCCGCGGCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGGGTTGTGGATCATTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134881.2 |
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| CDS CCA 90 bp | GTTCCGAGGGTTTTCATAATGATCCACAACCCGGACCCTCCCTTCTaGGCTGTCAGCCTTGGGACACTCGGAGTGACGGCCGCGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: VPRVFIMIHNPDPPF*AVSLGTLGVTAAAG Trigger: CCCCGCCGCGGCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGGGTTGTGGATCATTATGAAAACCCTCGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| CDS CCA 90 bp | AGTGTGGGAAGGCTCTCGTGGGGCAGTGTGGTAGGTAGTGCACTGTaGCCTCAGGCACTGCAGACACACTCAGAGACAGCAAAGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SVGRLSWGSVVGSAL*PQALQTHSETAKAD Trigger: GTCTGCCTTTGCTGTCTCTGAGTGTGTCTGCAGTGCCTGAGGCCACAGTGCACTACCTACCACACTGCCCCACGAGAGCCTTCCCACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112311.8 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGTCTGCATGCCTCCTGCTGCAGCCCCACACTGGAAGGCTAGTACTGAGAGGCAGGCAGAGCTCCTaGGCGATGTCGGTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QQSACLLLQPHTGRLVLRGRQSS*AMSVFL Trigger: CAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCC...TCTCAGTACTAGCCTTCCAGTGTGGGGCTGCAGCAGGAGGCATGCAGACTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CAA 90 bp | CAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGCATTCTGCTGCGATGTCGGTGTTTTaGATGGTCAGGGCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: QFVVSQGGLDGVFCQHSAAMSVF*MVRASS Trigger: GGAGGAAGCCCTGACCATCAAAAACACCGACATCGC...AGCAGAATGCTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | GCCACCGTGGGGTGGGAACAGCAGACTCTGAACAGATCCAAGCTGCCTGGCAGGACATTTTTAGATGTCTaGTCAAGGGATCCCACGTTC | + |
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Preference number: 5 (lower is better) Translates to: ATVGWEQQTLNRSKLPGRTFLDV*SRDPTF Trigger: GAACGTGGGATCCCTTGACAAGACATCTAAAAATGT...CCTGCCAGGCAGCTTGGATCTGTTCAGAGTCTGCTGTTCCCACCCCACGGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| CDS-3UTR CAA 90 bp | GCACACCTTTCTGGCTGGAACAGTGAGGGTATTGCAGAGAGTGCTTGTCACCTGGCGATGTCGGTGTTTTaGATGGTCAGGGCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AHLSGWNSEGIAESACHLAMSVF*MVRASS Trigger: GGAGGAAGCCCTGACCATCAAAAACACCGACATCGC...CAGGTGACAAGCACTCTCTGCAATACCCTCACTGTTCCAGCCAGAAAGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CAA 90 bp | TATCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTACGCGATGTCGGTGTTTTaGATGGTCAGGGCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: YQIASIRRSAGNLPQVRYAMSVF*MVRASS Trigger: GGAGGAAGCCCTGACCATCAAAAACACCGACATCGC...GTACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | ATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCGGGCAGGCAGAGCTCCTaGGCGATGTCGGTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: IYLRSGTSPCHSPELKTSGRQSS*AMSVFL Trigger: CAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCC...CGAAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | CTCTTGCTTCAGTTTGTAGTCAGCCAGGGCGGCCTTGATGGCGTCTTCTGCCAGACATTTTTAGATGTCTaGTCAAGGGATCCCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQFVVSQGGLDGVFCQTFLDV*SRDPTF Trigger: GAACGTGGGATCCCTTGACAAGACATCTAAAAATGT...CTGGCAGAAGACGCCATCAAGGCCGCCCTGGCTGACTACAAACTGAAGCAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112312.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAGCCAGCATAAGGCGCTCTGCTGGCAATCTACCTCAGGTCAGGTACAATCTGGCTCCTCCTTCTaGGACTCTTGCTTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDSQHKALCWQSTSGQVQSGSSF*DSCFSL Trigger: CAAACTGAAGCAAGAGTCCAAGAAGGAGGAGCCAGA...TTGTACCTGACCTGAGGTAGATTGCCAGCAGAGCGCCTTATGCTGGCTATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026937.12 |
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| CDS-3UTR CAA 90 bp | CTTAAGACTTCGGTGCTGATTTCAGTCCCAGGCCACAAACTAAATCAAGACACTGGCAGGCAGAGCTCCTaGGCGATGTCGGTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKTSVLISVPGHKLNQDTGRQSS*AMSVFL Trigger: CAAAAACACCGACATCGCCAAGGAGCTCTGCCTGCC...AGTGTCTTGATTTAGTTTGTGGCCTGGGACTGAAATCAGCACCGAAGTCTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | GGTACAAGTCCTTGTCACTCTCCAGAGCTTAAGACTTCGGTGCTGATTTCAGTCCCGCAGCCAAATGTTTaGAATCTGGCGTCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: GTSPCHSPELKTSVLISVPQPNV*NLASTI Trigger: GATTGTGGACGCCAGATTCAAAACATTTGGCTGCGG...GACTGAAATCAGCACCGAAGTCTTAAGCTCTGGAGAGTGACAAGGACTTGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | GTGGGTACTAGAGTCAGGAAGATTCAAGAGTGTGCTACTTGCACACCTTTCTGGCCGCAGCCAAATGTTTaGAATCTGGCGTCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VGTRVRKIQECATCTPFWPQPNV*NLASTI Trigger: GATTGTGGACGCCAGATTCAAAACATTTGGCTGCGG...CCAGAAAGGTGTGCAAGTAGCACACTCTTGAATCTTCCTGACTCTAGTACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCCACAAACTAAATCAAGACACTAACTGCACTAAGGACACACGTGAGCCGCAGCCAAATGTTTaGAATCTGGCGTCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VPGHKLNQDTNCTKDTREPQPNV*NLASTI Trigger: GATTGTGGACGCCAGATTCAAAACATTTGGCTGCGG...CTCACGTGTGTCCTTAGTGCAGTTAGTGTCTTGATTTAGTTTGTGGCCTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCAATCTACCTCAGGTCAGGTACAAGTCCTTGTCACTCTCCAGAGCTACATTTTTAGATGTCTaGTCAAGGGATCCCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAGNLPQVRYKSLSLSRATFLDV*SRDPTF Trigger: GAACGTGGGATCCCTTGACAAGACATCTAAAAATGT...AGCTCTGGAGAGTGACAAGGACTTGTACCTGACCTGAGGTAGATTGCCAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS-3UTR CAA 90 bp | GTGGGTACTAGAGTCAGGAAGATTCAAGAGTGTGCTACTTGCACACCTTTCTGGACATTTTTAGATGTCTaGTCAAGGGATCCCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTRVRKIQECATCTPFWTFLDV*SRDPTF Trigger: GAACGTGGGATCCCTTGACAAGACATCTAAAAATGT...CCAGAAAGGTGTGCAAGTAGCACACTCTTGAATCTTCCTGACTCTAGTACCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112311.8 |
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| CDS-3UTR CAA 90 bp | CCAGAGCTTAAGACTTCGGTGCTGATTTCAGTCCCAGGCCACAAACTAAATCAAACATTTTTAGATGTCTaGTCAAGGGATCCCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PELKTSVLISVPGHKLNQTFLDV*SRDPTF Trigger: GAACGTGGGATCCCTTGACAAGACATCTAAAAATGT...TTGATTTAGTTTGTGGCCTGGGACTGAAATCAGCACCGAAGTCTTAAGCTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026937.12 ENSMUST00000112312.8 |
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| CDS CCA 72 bp | CCCCCTCGCCCGCCCATACCTTCTTGTGGTAGAGCCTaGCCGGAGCCGACAGCTCCCGGGCGGGCAGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPRPPIPSCGRA*PEPTAPGRAGA Trigger: CGCGCCTGCCCGCCCGGGAGCTGTCGGCTCCGGCCAGGCTCTACCACAAGAAGGTATGGGCGGGCGAGGGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| CDS GCA 72 bp | CAGAGGCGGCCGCGGGGCTCCTCGGTGCTGGTGATCTaGGCAACGGCGGCAGGTCCCCTCGATGGTTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRRPRGSSVLVI*ATAAGPLDGSR Trigger: GCGCGAACCATCGAGGGGACCTGCCGCCGTTGCGCAGATCACCAGCACCGAGGAGCCCCGCGGCCGCCTCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123616.8 |
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| CDS CCA 72 bp | CCACAACCCGGACCCTCCCTTCTGGGCTGTCAGCCTTaGGACACTCGGAGTGACGGCCGCGGCGGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PQPGPSLLGCQP*DTRSDGRGGAE Trigger: CTCTGCCCCGCCGCGGCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGGGTTGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| CDS CCA 72 bp | GTTTTCATAATGATCCACAACCCGGACCCTCCCTTCTaGGCTGTCAGCCTTGGGACACTCGGAGTGACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFIMIHNPDPPF*AVSLGTLGVTA Trigger: GGCCGTCACTCCGAGTGTCCCAAGGCTGACAGCCCAGAAGGGAGGGTCCGGGTTGTGGATCATTATGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123616.8 ENSMUST00000134881.2 ENSMUST00000145778.8 |
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| CDS GCA 72 bp | ATCCACCTGGATCTGCAGTTTCATGACGTCACCACATaGCGGAGCCCCCACCAATCCGGTTCCAACATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: IHLDLQFHDVTT*RSPHQSGSNIF Trigger: AAAAATGTTGGAACCGGATTGGTGGGGGCTCCGGCATGTGGTGACGTCATGAAACTGCAGATCCAGGTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026937.12 ENSMUST00000112311.8 ENSMUST00000112312.8 ENSMUST00000145592.2 |
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