Pregenerated sensors for IRX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031738Ensembl transcript IDs: ENSMUST00000034185.13, ENSMUST00000167261.3
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACTCCCAGAAGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTaGACCAGACCTCTCCCAGGGTCGCTGGCATTGATAGGCTACACA | + |
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Preference number: 1 (lower is better) Translates to: PTPRSLHGSTESHSS*TRPLPGSLALIGYT Trigger: TGTGTAGCCTATCAATGCCAGCGACCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCTTCTGGGAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 90 bp | CGTTCAGACAGAATCACAAAGGGACAAGGGGGCAAAGCCCCGCCCTaGTGCTCACCTCCCACTGGCTGGCCTGTACTGGAAGAGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: RSDRITKGQGGKAPP*CSPPTGWPVLEETG Trigger: TCCAGTCTCTTCCAGTACAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCTTTGTGATTCTGTCTGAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 90 bp | GGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAAAGTATCCTGTaGGCACACACAGGGCTTTCCCCCAAGGTCTCCCACCTTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GLHSWEEERLGQSIL*AHTGLSPKVSHLLS Trigger: GGAGAGAAGGTGGGAGACCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 90 bp | GTATCAGGGAAGCAGTGGCCAAAGGGACTGTCAGGTTTCCTCTCATaGGTCCCTAGCACACACATTTACAGCCCCAGGACCACCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSGKQWPKGLSGFLS*VPSTHIYSPRTTRE Trigger: TTCCCTGGTGGTCCTGGGGCTGTAAATGTGTGTGCTAGGGACCCATGAGAGGAAACCTGACAGTCCCTTTGGCCACTGCTTCCCTGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 90 bp | GTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATaGTTCTGTGTGTTTGTCACAGGCAAAGTGAGAGCTCCCAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: VIWPVPSPACKIQLG*FCVFVTGKVRAPSP Trigger: TGGACTGGGAGCTCTCACTTTGCCTGTGACAAACACACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 90 bp | AGGAGATGCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTaGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RRCCSGPPFMGGRET*SKYPVSTHRAFPQG Trigger: ACCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGCATCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 90 bp | CCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGATaGGTATCAGGGAAGCAGTGGCCAAAGGGACTGTCAGGTTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: PLWSLPIPPNCLLLG*VSGKQWPKGLSGFL Trigger: GAGGAAACCTGACAGTCCCTTTGGCCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR GCA 90 bp | GTGACTTCCTCCATTTCTCTCTCTGTGATTAACAGAACTGAGGTCTaGAGCCCAAGACCCCACTCCCAGAAGCCTTCATGGCAGTACGGA | + |
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Preference number: 1 (lower is better) Translates to: VTSSISLSVINRTEV*SPRPHSQKPSWQYG Trigger: TCCGTACTGCCATGAAGGCTTCTGGGAGTGGGGTCTTGGGCTGCAGACCTCAGTTCTGTTAATCACAGAGAGAGAAATGGAGGAAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 90 bp | TTTGAAGGTAGAGCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTaGAGACCATTTCAGCAAGAAAGTTACACAGTGAGTGGGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: FEGRAGEEEGDTDSP*RPFQQESYTVSGLG Trigger: GCCCAGCCCACTCACTGTGTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGCTCTACCTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR GCA 90 bp | CCTTTCTACCACCTGCAGGTAGATGAGTGGTCCAGCCCTGGAGACTaGCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: PFYHLQVDEWSSPGD*LQSDFLQFIPTLPV Trigger: AACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGCTGGACCACTCATCTACCTGCAGGTGGTAGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 90 bp | CTAGCACACACATTTACAGCCCCAGGACCACCAGGGAACAAACGTTaGTCATCAGCAAATATTCTGATGTCATCCTGCTGTTCAGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LAHTFTAPGPPGNKR*SSANILMSSCCSAC Trigger: ACAAGCTGAACAGCAGGATGACATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTAAATGTGTGTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGGAGGTGTGTGTCATCTaGCCTGTCCCCAGTCCTGCG | + |
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Preference number: 2 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLEVCVI*PVPSPA Trigger: CGCAGGACTGGGGACAGGCCAGATGACACACACCTC...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTGCACCAGACCTCTCCCAGGGAAGAAAGTTACACAGTaGGTGGGCTGGGCAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLHGSTESHSSCTRPLPGKKVTQ*VGWAGV Trigger: CACCCCTGCCCAGCCCACTCACTGTGTAACTTTCTT...CCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGAATCACAAAGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCAAGTTACACAGTGAGTaGGCTGGGCAGGGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTESQRDKGAKPRPDAHLKLHSE*AGQGWV Trigger: CACCCACCCCTGCCCAGCCCACTCACTGTGTAACTT...GAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCTTTGTGATTCTGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR GCA 90 bp | ACCATGACTTCCCAGACTCCCTCCAGGCCTCTGCCTGTCTCATTGCCTAGGTGGAACAGAACTGAGGTCTaGAGCCCAAGACCCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: TMTSQTPSRPLPVSLPRWNRTEV*SPRPHS Trigger: GGAGTGGGGTCTTGGGCTGCAGACCTCAGTTCTGTT...CCACCTAGGCAATGAGACAGGCAGAGGCCTGGAGGGAGTCTGGGAAGTCATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CAA 90 bp | GAGGAGATGCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTaGGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: EEMLLRASIHGRKRD*VKVSCEHTQGFPPR Trigger: CCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGCATCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCGGCAAAGCCCCGCCCTaGTGCTCACCTCCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTGKAPP*CSPPTG Trigger: GCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCC...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAATTGTCACAGGCAAAGTaGGAGCTCCCAGTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: AGEEEGDTDSPWRPFQQELSQAK*ELPVHA Trigger: GGCATGGACTGGGAGCTCTCACTTTGCCTGTGACAA...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTGTCACAGGCAAAGTaGGAGCTCCCAGTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: ALETAFRVTFSNSYQLSLLSQAK*ELPVHA Trigger: GGCATGGACTGGGAGCTCTCACTTTGCCTGTGACAA...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR GCA 90 bp | ATAATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGAGAGTCCCACTCCAGCTaGACCAGACCTCTCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IICPLWSLPIPPNCLLLGESHSS*TRPLPG Trigger: CCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTC...TCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CAA 90 bp | GCTGGCATTGATAGGCTACACACCTTGGACTCAGCTAAGTTATTTTaGAAGGTAGAGCCGGGGAAGAGGAAGGAGACACAGACAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: AGIDRLHTLDSAKLF*KVEPGKRKETQTVL Trigger: AAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGCTCTACCTTCAAAAATAACTTAGCTGAGTCCAAGGTGTGTAGCCTATCAATGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAAGTTACGGTCAAAGTATCCTGTaGGCACACACAGGGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EEEGDTDSPWRPFQQESYGQSIL*AHTGLS Trigger: GGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACC...GTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGCCAGGGAACAAACGTTaGTCATCAGCAAATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALETAFRVTFSNSYQLSLPGNKR*SSANIL Trigger: CAGAATATTTGCTGATGATCAACGTTTGTTCCCTGG...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGGTCCATGCCAAGGTCTaGAAACTTCTTAATATGAAT | + |
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Preference number: 2 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGVHAKV*KLLNMN Trigger: ATTCATATTAAGAAGTTTCCAGACCTTGGCATGGAC...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGAAGATACAGCTAGGATaGTTCTGTGTGTTTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: ALETAFRVTFSNSYQLSLKIQLG*FCVFVT Trigger: TGTGACAAACACACAGAACCATCCTAGCTGTATCTT...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAGAGACTTGGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAGTCCATGCCAAGGTCTaGAAACTTCTTAATATGAAT | + |
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Preference number: 2 (lower is better) Translates to: RKRDLVKVSCEHTQGFPPVHAKV*KLLNMN Trigger: ATTCATATTAAGAAGTTTCCAGACCTTGGCATGGAC...TGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 72 bp | AGAATCACAAAGGGACAAGGGGGCAAAGCCCCGCCCTaGTGCTCACCTCCCACTGGCTGGCCTGTACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: RITKGQGGKAPP*CSPPTGWPVLE Trigger: TTCCAGTACAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCTTTGTGATTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR GCA 72 bp | AGAAGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTaGACCAGACCTCTCCCAGGGTCGCTGGCATTGATA | + |
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Preference number: 3 (lower is better) Translates to: RSLHGSTESHSS*TRPLPGSLALI Trigger: TATCAATGCCAGCGACCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | AAGCAGTGGCCAAAGGGACTGTCAGGTTTCCTCTCATaGGTCCCTAGCACACACATTTACAGCCCCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: KQWPKGLSGFLS*VPSTHIYSPRT Trigger: GGTCCTGGGGCTGTAAATGTGTGTGCTAGGGACCCATGAGAGGAAACCTGACAGTCCCTTTGGCCACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | CAGACAGAATCACAAAGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCAGACACAGACAGTCCTaGGAGACCATTTCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: QTESQRDKGAKPRPDAHLRHRQS*ETISAR Trigger: TCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCT...GAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCTTTGTGATTCTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 72 bp | TCATGGGAGGAAGAGAGACTTGGTCAAAGTATCCTGTaGGCACACACAGGGCTTTCCCCCAAGGTCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: SWEEERLGQSIL*AHTGLSPKVSH Trigger: GTGGGAGACCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR GCA 72 bp | GAGGTGTGTGTCATCTGGCCTGTCCCCAGTCCTGCGTaGAAGATACAGCTAGGATGGTTCTGTGTGTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: EVCVIWPVPSPA*KIQLGWFCVFV Trigger: GACAAACACACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGACACACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | AGGCTGCTTCCTTTCTACCACCTGCAGGTAGATGAGTaGTCCAGCCCTGGAGACTGCCTTCAGAGTGACTTT | + |
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Preference number: 3 (lower is better) Translates to: RLLPFYHLQVDE*SSPGDCLQSDF Trigger: AAAGTCACTCTGAAGGCAGTCTCCAGGGCTGGACCACTCATCTACCTGCAGGTGGTAGAAAGGAAGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | CCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATaGTTCTGTGTGTTTGTCACAGGCAAAGTGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: PVPSPACKIQLG*FCVFVTGKVRA Trigger: AGCTCTCACTTTGCCTGTGACAAACACACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | TGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTaGTCAAAGTATCCTGTGAGCACACACAGGGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CSGPPFMGGRET*SKYPVSTHRAF Trigger: GAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | AACTGCCTACTTCTTGGATGGGTATCAGGGAAGCAGTaGCCAAAGGGACTGTCAGGTTTCCTCTCATGGGTC | + |
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Preference number: 3 (lower is better) Translates to: NCLLLGWVSGKQ*PKGLSGFLSWV Trigger: GACCCATGAGAGGAAACCTGACAGTCCCTTTGGCCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | TCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGATaGGTATCAGGGAAGCAGTGGCCAAAGGGACTGTCA | + |
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Preference number: 3 (lower is better) Translates to: SLPIPPNCLLLG*VSGKQWPKGLS Trigger: TGACAGTCCCTTTGGCCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | ATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTaGATGGGTATCAGGGAAGCAGTGGCCAAAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: MVSSHPTKLPTS*MGIREAVAKGT Trigger: AGTCCCTTTGGCCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR GCA 72 bp | ATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTaGCTACTTCTTGGATGGGTATCAGGGAAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: ICPLWSLPIPPN*LLLGWVSGKQW Trigger: CCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGATGGGTAAGACACAGACAGTCCTaGGAGACCATTTCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: CPLWSLPIPPNCLLLGWVRHRQS*ETISAR Trigger: TCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCT...TACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR CCA 72 bp | AGAGCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTaGAGACCATTTCAGCAAGAAAGTTACACAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: RAGEEEGDTDSP*RPFQQESYTVS Trigger: ACTCACTGTGTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTCAGCTAAGTTATTTTaGAAGGTAGAGCCGGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ALETAFRVTFSNSYQLSLSAKLF*KVEPGK Trigger: CTTCCCCGGCTCTACCTTCAAAAATAACTTAGCTGA...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCGGGAGGAAGAGAGACTaGGTCAAAGTATCCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTGRKRD*VKVSCE Trigger: CTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCC...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATGGGAGGAAGAGAGACTaGGTCAAAGTATCCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: YSPRTTREQTLIISKYSDGRKRD*VKVSCE Trigger: CTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCC...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR TCA 72 bp | TCCCAGTCCATGCCAAGGTCTGGAAACTTCTTAATATaGATGTGGATCCGGAAGCAGCCATTTCCAAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: SQSMPRSGNFLI*MWIRKQPFPKV Trigger: GACTTTTGGAAATGGCTGCTTCCGGATCCACATTCATATTAAGAAGTTTCCAGACCTTGGCATGGACTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCGATAGGCTACACACCTaGGACTCAGCTAAGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTDRLHT*DSAKLF Trigger: AAATAACTTAGCTGAGTCCAAGGTGTGTAGCCTATC...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTGCACCAGACCTCTCCCAGGGGGCAGCTCCCAGCTCTaGCCGAGCACTGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHGSTESHSSCTRPLPGGSSQL*PSTAQQ Trigger: CTGCTGGGCAGTGCTCGGCCAGAGCTGGGAGCTGCC...CCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGGGCAGCTGCATAGGGTaGTCCATAGATGCCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLGSCIG*SIDAQG Trigger: GCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCC...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGGTCTTCTCCACTGTCTaGTTTCCTCTCCTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLVFSTV*FPLLPS Trigger: GGAGGGGAGGAGAGGAAAGCAGACAGTGGAGAAGAC...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGGCAGACACCAGAAACTaGGATGTGCTGCCATACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLADTRN*DVLPYG Trigger: CCCGTATGGCAGCACATCCCAGTTTCTGGTGTCTGC...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGCCCCTCCCTTGTTCTTaGGCGCCCATGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLPLPCS*APMSSC Trigger: ACAAGATGACATGGGCGCCCAAGAACAAGGGAGGGG...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTGCACCAGACCTCTCCCAGGGGCAGCCCCTGCAGGGTaGACGTGGAGTTTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHGSTESHSSCTRPLPGAAPAG*TWSFQK Trigger: CTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGC...CCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGAGTGGCACTGGAACTTaGAGACACCAGAAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLSGTGT*RHQKLG Trigger: TCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACT...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTGCACCAGACCTCTCCCAGGGAATCATGTGGCACTCTaGACTTTGTGCCCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHGSTESHSSCTRPLPGNHVAL*TLCPGR Trigger: CCGCCCAGGGCACAAAGTCCAGAGTGCCACATGATT...CCCTGGGAGAGGTCTGGTGCAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAGAGACTTGGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCACAGCCTGCGTGCTGCTaGGACCGCTGCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRDLVKVSCEHTQGFPPQPACC*DRCLLL Trigger: GAGGAGGAGGCAGCGGTCTCAGCAGCACGCAGGCTG...TGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGATGGGTAGGCAGCTCCCAGCTCTaGCCGAGCACTGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPLWSLPIPPNCLLLGWVGSSQL*PSTAQQ Trigger: CTGCTGGGCAGTGCTCGGCCAGAGCTGGGAGCTGCC...TACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGTGTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGACAGTGTGGGTGGCTCTaGGCCATAGGTCAGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: EVCVIWPVPSPACKIQLGQCGWL*AIGQVP Trigger: GGGTACCTGACCTATGGCCCAGAGCCACCCACACTG...TCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGACACACACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATGGTTCTGTGTGCGCCACACAGTGTaGGTGGCTCTGGGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIWPVPSPACKIQLGWFCVRHTV*VALGHR Trigger: CCTATGGCCCAGAGCCACCCACACTGTGTGGCGCAC...ACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | ACCATGACTTCCCAGACTCCCTCCAGGCCTCTGCCTGTCTCATTGCCTAGGTGGAGGCCTTCAGTGCGCTaGTGCTCTCCCTTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TMTSQTPSRPLPVSLPRWRPSVR*CSPLWH Trigger: ATGCCACAAGGGAGAGCACCAGCGCACTGAAGGCCT...CCACCTAGGCAATGAGACAGGCAGAGGCCTGGAGGGAGTCTGGGAAGTCATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAATCCAAGCATCTCTCCTaGGCGGCGGCGCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEEEGDTDSPWRPFQQESKHLS*AAAQGA Trigger: TGCTCCCTGCGCCGCCGCCCAGGAGAGATGCTTGGA...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGTGGGGTACGGGTTCTTaGGGTGCTCGTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGWGTGS*GARGAR Trigger: CCTGGCTCCACGAGCACCGCAAGAACCCGTACCCCA...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAAAGTATCCTGTGGGGTACGGGTTCTTaGGGTGCTCGTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAQGLHSWEEERLGQSILWGTGS*GARGAR Trigger: CCTGGCTCCACGAGCACCGCAAGAACCCGTACCCCA...CAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGTCTCCCACCTTCTCTCCTCCAAGTCTGATGAGGTGTGTGTCATCTGGGCAGCCCCTGCAGGGTaGACGTGGAGTTTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKVSHLLSSKSDEVCVIWAAPAG*TWSFQK Trigger: CTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGC...CCAGATGACACACACCTCATCAGACTTGGAGGAGAGAAGGTGGGAGACCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAGCCACACAGTGTGGGTaGCTCTGGGCCATAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGEEEGDTDSPWRPFQQEATQCG*LWAIGQ Trigger: CTGACCTATGGCCCAGAGCCACCCACACTGTGTGGC...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGTCTCCCACCTTCTCTCCTCCAAGTCTGATGAGGTGTGTGTCATCTGGAGGCCTTCAGTGCGCTaGTGCTCTCCCTTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKVSHLLSSKSDEVCVIWRPSVR*CSPLWH Trigger: ATGCCACAAGGGAGAGCACCAGCGCACTGAAGGCCT...CCAGATGACACACACCTCATCAGACTTGGAGGAGAGAAGGTGGGAGACCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAGATGCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAATCATGTGGCACTCTaGACTTTGTGCCCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QEEMLLRASIHGRKRDLVNHVAL*TLCPGR Trigger: CCGCCCAGGGCACAAAGTCCAGAGTGCCACATGATT...GACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGCATCTCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAAGGTCTCCCACCTTCTGGTGCACAGTTCAGTaGCAGCCCCTGCAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKVSCEHTQGFPPRSPTFWCTVQ*QPLQGE Trigger: TTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCA...GAAGGTGGGAGACCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGTGTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGAGAGCTAAGGACCAAATaGGGGGTTTGTGGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVCVIWPVPSPACKIQLGELRTK*GVCGHL Trigger: CAAGTGGCCACAAACCCCGCATTTGGTCCTTAGCTC...TCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGACACACACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAGATGCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCACCTTCTGCTCCAGATaGGTACTGGAACCGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEEMLLRASIHGRKRDLVTFCSR*VLEPHF Trigger: GAAGTGCGGTTCCAGTACCCATCTGGAGCAGAAGGT...GACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGCATCTCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGTCTCCCACCTTCTCTCCTCCAAGTCTGATGAGGTGTGTGTCATCTGGCCAGAAACTGGGATGTaGTGCCATACGGGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKVSHLLSSKSDEVCVIWPETGM*CHTGVQ Trigger: TTGGACACCCGTATGGCAGCACATCCCAGTTTCTGG...CCAGATGACACACACCTCATCAGACTTGGAGGAGAGAAGGTGGGAGACCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGGTCTTCTCCACTGTCTaGTTTCCTCTCCTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGVFSTV*FPLLPS Trigger: GGAGGGGAGGAGAGGAAAGCAGACAGTGGAGAAGAC...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAAAGTATCCTGCAGGCAGGGGTTGCGTaGTCTTCTGAAAATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQGLHSWEEERLGQSILQAGVA*SSENPP Trigger: TGGCGGATTTTCAGAAGAGCACGCAACCCCTGCCTG...CAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAACCCCTCCCTTGTTCTTaGGCGCCCATGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGEEEGDTDSPWRPFQQEPLPCS*APMSSC Trigger: ACAAGATGACATGGGCGCCCAAGAACAAGGGAGGGG...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATGGTTCTGTTGCTTCTGCTCCAGATaGGTACTGGAACCGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VIWPVPSPACKIQLGWFCCFCSR*VLEPHF Trigger: GAAGTGCGGTTCCAGTACCCATCTGGAGCAGAAGCA...ACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034185.13 |
||
| 3UTR CAA 72 bp | TCCAGCTGCACCAGACCTCTCCCAGGGTCGCTGGCATaGATAGGCTACACACCTTGGACTCAGCTAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCTRPLPGSLA*IGYTPWTQLSY Trigger: ATAACTTAGCTGAGTCCAAGGTGTGTAGCCTATCAATGCCAGCGACCCTGGGAGAGGTCTGGTGCAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGGAAGTCAGCTTCCCCTaGTTGTGGGGCCTCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGEVSFP*LWGLSK Trigger: TTTACTGAGGCCCCACAATCAGGGGAAGCTGACTTC...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATGCTCTGGCCGAGCACTaGCCAGCAGCCGACTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTTREQTLIISKYSDALAEH*PAADCH Trigger: ATGACAGTCGGCTGCTGGGCAGTGCTCGGCCAGAGC...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAAGGTCTCCCACCTTCGTAACTCTGGGCAGCTaGATAGGGTGCTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKVSCEHTQGFPPRSPTFVTLGS*IGCSID Trigger: ATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTAC...GAAGGTGGGAGACCTTGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATGGTTCTGTTTGTGGCATTCTTCCTaGGGCCAGCACTGCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: VIWPVPSPACKIQLGWFCLWHSS*GQHCSI Trigger: AATTGAGCAGTGCTGGCCGCAGGAAGAATGCCACAA...ACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAAAGTATCCTGGAGCTAAGGACCAAATaGGGGGTTTGTGGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQGLHSWEEERLGQSILELRTK*GVCGHL Trigger: CAAGTGGCCACAAACCCCGCATTTGGTCCTTAGCTC...CAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGGCAGACACCAGAAACTaGGATGTGCTGCCATACGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALETAFRVTFSNSYQLSLADTRN*DVLPYG Trigger: CCCGTATGGCAGCACATCCCAGTTTCTGGTGTCTGC...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | ATAATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGAGTGCGCCACACAGTGTaGGTGGCTCTGGGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IICPLWSLPIPPNCLLLGVRHTV*VALGHR Trigger: CCTATGGCCCAGAGCCACCCACACTGTGTGGCGCAC...TCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | ATAATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGACTGGCTGGGTCAGGCTaGGGGCAAAGCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IICPLWSLPIPPNCLLLGLAGSG*GQSFLQ Trigger: CTGCAGGAAGCTTTGCCCCCAGCCTGACCCAGCCAG...TCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| 3UTR CAA 72 bp | CTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTaGGTCAAAGTATCCTGTGAGCACACACAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRASIHGRKRD*VKVSCEHTQGF Trigger: AAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| 3UTR CAA 72 bp | TATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTaGGATGGGTATCAGGGAAGCAGTGGCCAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YGLFPSHQTAYF*DGYQGSSGQRD Trigger: GTCCCTTTGGCCACTGCTTCCCTGATACCCATCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGGTAACTCTGGGCAGCTaGATAGGGTGCTCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGVTLGS*IGCSID Trigger: ATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTAC...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAATTGTGGCATTCTTCCTaGGGCCAGCACTGCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: AGEEEGDTDSPWRPFQQELWHSS*GQHCSI Trigger: AATTGAGCAGTGCTGGCCGCAGGAAGAATGCCACAA...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AAGATACAGCTAGGATGGTTCTGTGTGTTTGTCACAGGCAAAGTGAGAGCTCCCTCTCCGCCTCGGGTATaGTGCACAGTTCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIQLGWFCVFVTGKVRAPSPPRV*CTVQWQ Trigger: CTGCCACTGAACTGTGCACCATACCCGAGGCGGAGA...GGGAGCTCTCACTTTGCCTGTGACAAACACACAGAACCATCCTAGCTGTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAGAGACTTGGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCATCCTTGAACTCATACTaGGGATTCAGTGCGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKRDLVKVSCEHTQGFPPSLNSY*GFSAPH Trigger: GTGTGGCGCACTGAATCCTCAGTATGAGTTCAAGGA...TGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATGGCAGCTGCATAGGGTaGTCCATAGATGCCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTTREQTLIISKYSDGSCIG*SIDAQG Trigger: GCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCC...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCATGACTTCCGCCACACAGTGTGGGTaGCTCTGGGCCATAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTFSNSYQLSLLTTMTSATQCG*LWAIGQ Trigger: CTGACCTATGGCCCAGAGCCACCCACACTGTGTGGC...GGAAGTCATGGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | AGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCATGACTTCCAGCCCCCGGGCTTCCTaGCTGGCAGTAGCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTFSNSYQLSLLTTMTSSPRAS*LAVASL Trigger: CAAAGATGCTACTGCCAGCCAGGAAGCCCGGGGGCT...GGAAGTCATGGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAGATGCTGCTCAGGGCCTCCATTCATGGGAGGAAGAGAGACTTGGTCAGTTTCCAAAAGCTTTaGCTGCAGGAGAATCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEEMLLRASIHGRKRDLVSFQKL*LQENPL Trigger: AAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACT...GACCAAGTCTCTCTTCCTCCCATGAATGGAGGCCCTGAGCAGCATCTCCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAAGTTACTGGTGCACAGTTCAGTaGCAGCCCCTGCAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEEGDTDSPWRPFQQESYWCTVQ*QPLQGE Trigger: TTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCA...GTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | ATAATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGATCTCCGCCTCGGGTATaGTGCACAGTTCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IICPLWSLPIPPNCLLLGSPPRV*CTVQWQ Trigger: CTGCCACTGAACTGTGCACCATACCCGAGGCGGAGA...TCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAATTCCTGCAGCATCCTTaGACTCATACTGAGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEEEGDTDSPWRPFQQEFLQHP*THTEDS Trigger: TGAATCCTCAGTATGAGTTCAAGGATGCTGCAGGAA...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | ATAATATGCCCTCTATGGTCTCTTCCCATCCCACCAAACTGCCTACTTCTTGGACAGGCAGGGGTTGCGTaGTCTTCTGAAAATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IICPLWSLPIPPNCLLLGQAGVA*SSENPP Trigger: TGGCGGATTTTCAGAAGAGCACGCAACCCCTGCCTG...TCCAAGAAGTAGGCAGTTTGGTGGGATGGGAAGAGACCATAGAGGGCATATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTTCTTAATATGAATGTGGATCCGGAAGCAGCCATTTCCAAAAGTCTTTCCAAGCATCTCTCCTaGGCGGCGGCGCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKLLNMNVDPEAAISKSLSKHLS*AAAQGA Trigger: TGCTCCCTGCGCCGCCGCCCAGGAGAGATGCTTGGA...AAGACTTTTGGAAATGGCTGCTTCCGGATCCACATTCATATTAAGAAGTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | GTCATCTGGCCTGTCCCCAGTCCTGCGTGCAAGATACAGCTAGGATGGTTCTGTAGTTTCCAAAAGCTTTaGCTGCAGGAGAATCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIWPVPSPACKIQLGWFCSFQKL*LQENPL Trigger: AAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACT...ACAGAACCATCCTAGCTGTATCTTGCACGCAGGACTGGGGACAGGCCAGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| 3UTR CAA 72 bp | TCTCCCAGGGTCGCTGGCATTGATAGGCTACACACCTaGGACTCAGCTAAGTTATTTTTGAAGGTAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPRVAGIDRLHT*DSAKLFLKVEP Trigger: CGGCTCTACCTTCAAAAATAACTTAGCTGAGTCCAAGGTGTGTAGCCTATCAATGCCAGCGACCCTGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGAGACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTCCTGCAGCATCCTTaGACTCATACTGAGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALETAFRVTFSNSYQLSLFLQHP*THTEDS Trigger: TGAATCCTCAGTATGAGTTCAAGGATGCTGCAGGAA...CAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGTCTCCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATGAAGTCAGCTTCCCCTaGTTGTGGGGCCTCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTTREQTLIISKYSDEVSFP*LWGLSK Trigger: TTTACTGAGGCCCCACAATCAGGGGAAGCTGACTTC...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATCCAGAAACTGGGATGTaGTGCCATACGGGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTTREQTLIISKYSDPETGM*CHTGVQ Trigger: TTGGACACCCGTATGGCAGCACATCCCAGTTTCTGG...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTTCTTAATATGAATGTGGATCCGGAAGCAGCCATTTCCAAAAGTCTTCTGGCTGGGTCAGGCTaGGGGCAAAGCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKLLNMNVDPEAAISKSLLAGSG*GQSFLQ Trigger: CTGCAGGAAGCTTTGCCCCCAGCCTGACCCAGCCAG...AAGACTTTTGGAAATGGCTGCTTCCGGATCCACATTCATATTAAGAAGTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR TCA 90 bp | TACAGCCCCAGGACCACCAGGGAACAAACGTTGATCATCAGCAAATATTCTGATTCCTTGAACTCATACTaGGGATTCAGTGCGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YSPRTTREQTLIISKYSDSLNSY*GFSAPH Trigger: GTGTGGCGCACTGAATCCTCAGTATGAGTTCAAGGA...ATCAGAATATTTGCTGATGATCAACGTTTGTTCCCTGGTGGTCCTGGGGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCAGTGGCACTGGAACTTaGAGACACCAGAAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTSGTGT*RHQKLG Trigger: TCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACT...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTTCTTAATATGAATGTGGATCCGGAAGCAGCCATTTCCAAAAGTCTTAGCCCCCGGGCTTCCTaGCTGGCAGTAGCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WKLLNMNVDPEAAISKSLSPRAS*LAVASL Trigger: CAAAGATGCTACTGCCAGCCAGGAAGCCCGGGGGCT...AAGACTTTTGGAAATGGCTGCTTCCGGATCCACATTCATATTAAGAAGTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS GCA 90 bp | GGTACCCAGGGTAACTCTGGGCAGCTGCATAGGGTGCTCCATAGATaGCCAAGGCAGCTCCCAGCTCTGGCCGAGCACTGCCCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTQGNSGQLHRVLHR*PRQLPALAEHCPAA Trigger: GGCTGCTGGGCAGTGCTCGGCCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACCCTGGGTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACAAGGGGGCAAAGCCCCGCCCTGATGCTCACCTCCCACTGGCTGGCCTGGGGAGCAGGCAGGGGTaGCGTGCTCTTCTGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RDKGAKPRPDAHLPLAGLGSRQG*RALLKI Trigger: GATTTTCAGAAGAGCACGCAACCCCTGCCTGCTCCC...CAGGCCAGCCAGTGGGAGGTGAGCATCAGGGCGGGGCTTTGCCCCCTTGTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS GCA 90 bp | GCCATAGGTCAGGTACCCAGGGTAACTCTGGGCAGCTGCATAGGGTaGTCCATAGATGCCCAAGGCAGCTCCCAGCTCTGGCCGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AIGQVPRVTLGSCIG*SIDAQGSSQLWPST Trigger: AGTGCTCGGCCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACCCTGGGTACCTGACCTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS GCA 90 bp | TGGCTCTGGGCCATAGGTCAGGTACCCAGGGTAACTCTGGGCAGCTaGATAGGGTGCTCCATAGATGCCCAAGGCAGCTCCCAGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLWAIGQVPRVTLGS*IGCSIDAQGSSQLW Trigger: CCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACCCTGGGTACCTGACCTATGGCCCAGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | AGCTGCATAGGGTGCTCCATAGATGCCCAAGGCAGCTCCCAGCTCTaGCCGAGCACTGCCCAGCAGCCGACTGTCATAGGGTGTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCIGCSIDAQGSSQL*PSTAQQPTVIGCTA Trigger: TGCTGTACACCCTATGACAGTCGGCTGCTGGGCAGTGCTCGGCCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | GACTTTGTGCCCTGGGCGGAGTTGAGGGAGCACTTTCGACAGCGCTaGCTGCCGCAGTGTGAGCTAAGGACCAAATGCGGGGTTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DFVPWAELREHFRQR*LPQCELRTKCGVCG Trigger: GCCACAAACCCCGCATTTGGTCCTTAGCTCACACTGCGGCAGCCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | AACTGGGCTGTCTGGGAATCATGTGGCACTCTGGACTTTGTGCCCTaGGCGGAGTTGAGGGAGCACTTTCGACAGCGCTGGCTGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NWAVWESCGTLDFVP*AELREHFRQRWLPQ Trigger: CTGCGGCAGCCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTCCAGAGTGCCACATGATTCCCAGACAGCCCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS-3UTR CAA 90 bp | ACCATGACTTCCCAGACTCCCTCCAGGCCTCTGCCTGTCTCATTGCCTAGGTGGCTCTCCTCCCCTCCCTaGTTCTTGGGCGCCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TMTSQTPSRPLPVSLPRWLSSPP*FLGAHV Trigger: GACATGGGCGCCCAAGAACAAGGGAGGGGAGGAGAG...CCACCTAGGCAATGAGACAGGCAGAGGCCTGGAGGGAGTCTGGGAAGTCATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | TCCTCCAGGTCTTCCAGGTCACTCAGCCTCAGCCCCCGGGCTTCCTaGCTGGCAGTAGCATCTTTGGTGTCACCATTCAGGCATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSSRSLSLSPRAS*LAVASLVSPFRHPR Trigger: TCTGGGATGCCTGAATGGTGACACCAAAGATGCTACTGCCAGCCAGGAAGCCCGGGGGCTGAGGCTGAGTGACCTGGAAGACCTGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | AGATGGGTACTGGAACCGCACTTCAGGCTCTCTCCGCCTCGGGTATaGTGCACAGTTCAGTGGCAGCCCCTGCAGGGTGAACGTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RWVLEPHFRLSPPRV*CTVQWQPLQGERGV Trigger: AACTCCACGTTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCATACCCGAGGCGGAGAGAGCCTGAAGTGCGGTTCCAGTACCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS-3UTR CAA 90 bp | CCAAGACCCCACTCCCAGAAGCCTTCATGGCAGTACGGAGTCCCACTCCAGCTGTCCCCTCCCTTGTTCTaGGGCGCCCATGTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRPHSQKPSWQYGVPLQLSPPLF*GAHVIL Trigger: CAAGATGACATGGGCGCCCAAGAACAAGGGAGGGGA...CAGCTGGAGTGGGACTCCGTACTGCCATGAAGGCTTCTGGGAGTGGGGTCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 90 bp | GGCTCTCTCCGCCTCGGGTATGGTGCACAGTTCAGTGGCAGCCCCTaGAGGGTGAACGTGGAGTTTCCAAAAGCTTTGGCTGCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLRLGYGAQFSGSP*RVNVEFPKALAAGE Trigger: TTCTCCTGCAGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCATACCCGAGGCGGAGAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 90 bp | CTGAGGCCACATCTGACACTGGCCGAGGGGCCGTTTCGCAGCAAGTaGCACTGGAACTTGCAGACACCAGAAACTGGGATGTGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRPHLTLAEGPFRSK*HWNLQTPETGMCCH Trigger: ATGGCAGCACATCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTTGCTGCGAAACGGCCCCTCGGCCAGTGTCAGATGTGGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 90 bp | CACTTTCGACAGCGCTGGCTGCCGCAGTGTGAGCTAAGGACCAAATaGGGGGTTTGTGGCCACTTGGGTAGTGTAAGATCATCGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFRQRWLPQCELRTK*GVCGHLGSVRSSWG Trigger: GCCCCACGATGATCTTACACTACCCAAGTGGCCACAAACCCCGCATTTGGTCCTTAGCTCACACTGCGGCAGCCAGCGCTGTCGAAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 90 bp | TGGCAGCCCCTGCAGGGTGAACGTGGAGTTTCCAAAAGCTTTGGCTaGAGGAGAATCCTCTTCGCCTTCGGAGTCTCTGGGTACCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WQPLQGERGVSKSFG*RRILFAFGVSGYQE Trigger: CTCCTGGTACCCAGAGACTCCGAAGGCGAAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGTCCCCTCCCTTGTTCTaGGGCGCCCATGTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGSPPLF*GAHVIL Trigger: CAAGATGACATGGGCGCCCAAGAACAAGGGAGGGGA...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | AAGATACAGCTAGGATGGTTCTGTGTGTTTGTCACAGGCAAAGTGAGAGCTCCCCTCTCCTCCCCTCCCTaGTTCTTGGGCGCCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KIQLGWFCVFVTGKVRAPLSSPP*FLGAHV Trigger: GACATGGGCGCCCAAGAACAAGGGAGGGGAGGAGAG...GGGAGCTCTCACTTTGCCTGTGACAAACACACAGAACCATCCTAGCTGTATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGACCTCTCACCCTACTCCCGTTCAGACAGAATCACAAAGGGACAAGGGGGAAGTGGCACTGGAACTaGCAGACACCAGAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FRPLTLLPFRQNHKGTRGKWHWN*QTPETG Trigger: CCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTT...CCCCCTTGTCCCTTTGTGATTCTGTCTGAACGGGAGTAGGGTGAGAGGTCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAAGTTACCGCTGGTGCTCTCCCTaGTGGCATTCTTCCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEEGDTDSPWRPFQQESYRWCSP*WHSSCG Trigger: GCCGCAGGAAGAATGCCACAAGGGAGAGCACCAGCG...GTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAGATACTGCCCCAGAGTaGTTTCATAGGGGTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGEEEGDTDSPWRPFQQEDTAPE*FHRGSR Trigger: CCTACTACCCCTATGAAACAACTCTGGGGCAGTATC...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGAGACTTGGTCAAAGTATCCTGTGAGCACACACAGGGCTTTCCCCCAGATACTGCCCCAGAGTaGTTTCATAGGGGTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRDLVKVSCEHTQGFPPDTAPE*FHRGSR Trigger: CCTACTACCCCTATGAAACAACTCTGGGGCAGTATC...TGGGGGAAAGCCCTGTGTGTGCTCACAGGATACTTTGACCAAGTCTCTCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCGGGAGCAGGCAGGGGTaGCGTGCTCTTCTGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTGSRQG*RALLKI Trigger: GATTTTCAGAAGAGCACGCAACCCCTGCCTGCTCCC...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | GCCGGGGAAGAGGAAGGAGACACAGACAGTCCTTGGAGACCATTTCAGCAAGAAGAGTTTCCAAAAGCTTaGGCTGCAGGAGAATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGEEEGDTDSPWRPFQQEEFPKA*AAGESS Trigger: AGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTC...TTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCTTCCTCTTCCCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | AGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCATGACTTCCAAGTGGCACTGGAACTaGCAGACACCAGAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVTFSNSYQLSLLTTMTSKWHWN*QTPETG Trigger: CCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTT...GGAAGTCATGGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTCAGAGTGACTTTCTCCAATTCATACCAACTCTCCCTGTTAACCACCGAGTTTCCAAAAGCTTaGGCTGCAGGAGAATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAFRVTFSNSYQLSLLTTEFPKA*AAGESS Trigger: AGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTC...GGTGGTTAACAGGGAGAGTTGGTATGAATTGGAGAAAGTCACTCTGAAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS GCA 72 bp | CCTGGGCGGCGGCGCAGGGAGCAGGCAGGGGTTGCGTaGTCTTCTGAAAATCCGCCAGCCTGCGTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGRRRREQAGVA*SSENPPACVLL Trigger: CAGCAGCACGCAGGCTGGCGGATTTTCAGAAGAGCACGCAACCCCTGCCTGCTCCCTGCGCCGCCGCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
||
| CDS TCA 72 bp | GCGGCGCAGGGAGCAGGCAGGGGTTGCGTGCTCTTCTaGAAATCCGCCAGCCTGCGTGCTGCTGAGACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAQGAGRGCVLF*KSASLRAAETA Trigger: AGCGGTCTCAGCAGCACGCAGGCTGGCGGATTTTCAGAAGAGCACGCAACCCCTGCCTGCTCCCTGCGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | GGGTGCTCCATAGATGCCCAAGGCAGCTCCCAGCTCTaGCCGAGCACTGCCCAGCAGCCGACTGTCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: GCSIDAQGSSQL*PSTAQQPTVIG Trigger: CCCTATGACAGTCGGCTGCTGGGCAGTGCTCGGCCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS TCA 72 bp | CATGTGGCACTCTGGACTTTGTGCCCTGGGCGGAGTTaGGGGAGCACTTTCGACAGCGCTGGCTGCCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HVALWTLCPGRS*GSTFDSAGCRS Trigger: ACTGCGGCAGCCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTCCAGAGTGCCACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | GGTAACTCTGGGCAGCTGCATAGGGTGCTCCATAGATaGCCAAGGCAGCTCCCAGCTCTGGCCGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GNSGQLHRVLHR*PRQLPALAEHC Trigger: GCAGTGCTCGGCCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | GAACCGCACTTCAGGCTCTCTCCGCCTCGGGTATGGTaGACAGTTCAGTGGCAGCCCCTGCAGGGTGAACGT | + |
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Preference number: 6 (lower is better) Translates to: EPHFRLSPPRVW*TVQWQPLQGER Trigger: ACGTTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCATACCCGAGGCGGAGAGAGCCTGAAGTGCGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 72 bp | TCATGTGGCACTCTGGACTTTGTGCCCTGGGCGGAGTaGAGGGAGCACTTTCGACAGCGCTGGCTGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SCGTLDFVPWAE*REHFRQRWLPQ Trigger: CTGCGGCAGCCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTCCAGAGTGCCACATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | CAGGTACCCAGGGTAACTCTGGGCAGCTGCATAGGGTaGTCCATAGATGCCCAAGGCAGCTCCCAGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QVPRVTLGSCIG*SIDAQGSSQLW Trigger: CCAGAGCTGGGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACCCTGGGTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | CTGAGGATTCAGTGCGCCACACAGTGTGGGTGGCTCTaGGCCATAGGTCAGGTACCCAGGGTAACTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LRIQCATQCGWL*AIGQVPRVTLG Trigger: GCCCAGAGTTACCCTGGGTACCTGACCTATGGCCCAGAGCCACCCACACTGTGTGGCGCACTGAATCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 90 bp | GTCTGGGAATCATGTGGCACTCTGGACTTTGTGCCCTGGGCGGAGTaGAGGGAGCACTTTCGACAGCGCTGGCTGCCGCAGTGTGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: VWESCGTLDFVPWAE*REHFRQRWLPQCEL Trigger: TAGCTCACACTGCGGCAGCCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTCCAGAGTGCCACATGATTCCCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | GCCATAGGTCAGGTACCCAGGGTAACTCTGGGCAGCTaGATAGGGTGCTCCATAGATGCCCAAGGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AIGQVPRVTLGS*IGCSIDAQGSS Trigger: GGAGCTGCCTTGGGCATCTATGGAGCACCCTATGCAGCTGCCCAGAGTTACCCTGGGTACCTGACCTATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | TCTTCCAGGTCACTCAGCCTCAGCCCCCGGGCTTCCTaGCTGGCAGTAGCATCTTTGGTGTCACCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRSLSLSPRAS*LAVASLVSPFR Trigger: CCTGAATGGTGACACCAAAGATGCTACTGCCAGCCAGGAAGCCCGGGGGCTGAGGCTGAGTGACCTGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | GTCTGGGAATCATGTGGCACTCTGGACTTTGTGCCCTaGGCGGAGTTGAGGGAGCACTTTCGACAGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VWESCGTLDFVP*AELREHFRQRW Trigger: CCAGCGCTGTCGAAAGTGCTCCCTCAACTCCGCCCAGGGCACAAAGTCCAGAGTGCCACATGATTCCCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 72 bp | GCCGAGGGGCCGTTTCGCAGCAAGTGGCACTGGAACTaGCAGACACCAGAAACTGGGATGTGCTGCCATACG | + |
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Preference number: 6 (lower is better) Translates to: AEGPFRSKWHWN*QTPETGMCCHT Trigger: CGTATGGCAGCACATCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTTGCTGCGAAACGGCCCCTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 90 bp | TCACTCAGCCTCAGCCCCCGGGCTTCCTGGCTGGCAGTAGCATCTTaGGTGTCACCATTCAGGCATCCCAGAGAGTCTTCTCCACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSLSPRASWLAVAS*VSPFRHPRESSPLS Trigger: AGACAGTGGAGAAGACTCTCTGGGATGCCTGAATGGTGACACCAAAGATGCTACTGCCAGCCAGGAAGCCCGGGGGCTGAGGCTGAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | CGCCTCGGGTATGGTGCACAGTTCAGTGGCAGCCCCTaGAGGGTGAACGTGGAGTTTCCAAAAGCTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLGYGAQFSGSP*RVNVEFPKALA Trigger: AGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGCCACTGAACTGTGCACCATACCCGAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | CATCTGACACTGGCCGAGGGGCCGTTTCGCAGCAAGTaGCACTGGAACTTGCAGACACCAGAAACTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: HLTLAEGPFRSK*HWNLQTPETGM Trigger: CATCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTTGCTGCGAAACGGCCCCTCGGCCAGTGTCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 90 bp | TTCAGTGGCAGCCCCTGCAGGGTGAACGTGGAGTTTCCAAAAGCTTaGGCTGCAGGAGAATCCTCTTCGCCTTCGGAGTCTCTGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: FSGSPCRVNVEFPKA*AAGESSSPSESLGT Trigger: GGTACCCAGAGACTCCGAAGGCGAAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAGGGGCTGCCACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS TCA 72 bp | GGGTCAGGCTGGGGGCAAAGCTTCCTGCAGCATCCTTaGACTCATACTGAGGATTCAGTGCGCCACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSGWGQSFLQHP*THTEDSVRHTV Trigger: CACTGTGTGGCGCACTGAATCCTCAGTATGAGTTCAAGGATGCTGCAGGAAGCTTTGCCCCCAGCCTGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | CAGCGCTGGCTGCCGCAGTGTGAGCTAAGGACCAAATaGGGGGTTTGTGGCCACTTGGGTAGTGTAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: QRWLPQCELRTK*GVCGHLGSVRS Trigger: TGATCTTACACTACCCAAGTGGCCACAAACCCCGCATTTGGTCCTTAGCTCACACTGCGGCAGCCAGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | CTCATACTGAGGATTCAGTGCGCCACACAGTGTGGGTaGCTCTGGGCCATAGGTCAGGTACCCAGGGTAACT | + |
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Preference number: 6 (lower is better) Translates to: LILRIQCATQCG*LWAIGQVPRVT Trigger: AGTTACCCTGGGTACCTGACCTATGGCCCAGAGCCACCCACACTGTGTGGCGCACTGAATCCTCAGTATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 72 bp | TGTGAGCTAAGGACCAAATGCGGGGTTTGTGGCCACTaGGGTAGTGTAAGATCATCGTGGGGCCGCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CELRTKCGVCGH*GSVRSSWGRLA Trigger: AGCCAGGCGGCCCCACGATGATCTTACACTACCCAAGTGGCCACAAACCCCGCATTTGGTCCTTAGCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS TCA 72 bp | GGGGCAAAGCTTCCTGCAGCATCCTTGAACTCATACTaGGGATTCAGTGCGCCACACAGTGTGGGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAKLPAASLNSY*GFSAPHSVGGS Trigger: AGAGCCACCCACACTGTGTGGCGCACTGAATCCTCAGTATGAGTTCAAGGATGCTGCAGGAAGCTTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | CTGCAGGGTGAACGTGGAGTTTCCAAAAGCTTTGGCTaGAGGAGAATCCTCTTCGCCTTCGGAGTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQGERGVSKSFG*RRILFAFGVSG Trigger: CCCAGAGACTCCGAAGGCGAAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 72 bp | AGCCCCTGCAGGGTGAACGTGGAGTTTCCAAAAGCTTaGGCTGCAGGAGAATCCTCTTCGCCTTCGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SPCRVNVEFPKA*AAGESSSPSES Trigger: AGACTCCGAAGGCGAAGAGGATTCTCCTGCAGCCAAAGCTTTTGGAAACTCCACGTTCACCCTGCAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | TGCTCTCCCTTGTGGCATTCTTCCTGCGGCCAGCACTaGTCAATTCCACTCCGCCATACCTGTCGTATTGAT | + |
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Preference number: 6 (lower is better) Translates to: CSPLWHSSCGQH*SIPLRHTCRID Trigger: ATCAATACGACAGGTATGGCGGAGTGGAATTGAGCAGTGCTGGCCGCAGGAAGAATGCCACAAGGGAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS GCA 72 bp | TGGCACTGGAACTTGCAGACACCAGAAACTGGGATGTaGTGCCATACGGGTGTCCAAAAGGTGAAAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WHWNLQTPETGM*CHTGVQKVKRP Trigger: TGGCCTTTTCACCTTTTGGACACCCGTATGGCAGCACATCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CCA 72 bp | CAGCAAGTGGCACTGGAACTTGCAGACACCAGAAACTaGGATGTGCTGCCATACGGGTGTCCAAAAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QQVALELADTRN*DVLPYGCPKGE Trigger: TTCACCTTTTGGACACCCGTATGGCAGCACATCCCAGTTTCTGGTGTCTGCAAGTTCCAGTGCCACTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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| CDS CAA 72 bp | AGCACTGCTCAATTCCACTCCGCCATACCTGTCGTATaGATACTGCCCCAGAGTTGTTTCATAGGGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: STAQFHSAIPVV*ILPQSCFIGVV Trigger: TACTACCCCTATGAAACAACTCTGGGGCAGTATCAATACGACAGGTATGGCGGAGTGGAATTGAGCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034185.13 ENSMUST00000167261.3 |
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