Pregenerated sensors for IRX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031737Ensembl transcript IDs: ENSMUST00000034184.12, ENSMUST00000210246.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTTCCGTGGTAGCTCCGACAGGTTTCAGGCAGGCAAATCTTACTaGAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCTCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: KFRGSSDRFQAGKSY*RESKPLSLSSGLLP Trigger: TGGAAGGAGACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTGAAACCTGTCGGAGCTACCACGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR CCA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATaGTTCCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: YWLCPLPLEPPSQPP*FQNSRSVGYRGRKA Trigger: AGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR CAA 90 bp | GGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCTCCTTCCAGGTATaGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GSQSLSLSALVSFQV*ALSSSTGTSFSAAM Trigger: CATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGACCAGAGCTGAGAGAGAGAGGCTTTGACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCCTTCTCAGCCGCCATaGTTCCAGAATTCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QAGKSYCRESKPLSLSSGPSQPP*FQNSRS Trigger: TGACCTTGAATTCTGGAACCATGGCGGCTGAGAAGG...ACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR CCA 72 bp | GCCTCTCTCTCTCAGCTCTGGTCTCCTTCCAGGTATTaGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ASLSQLWSPSRY*LCPLPLEPPSQ Trigger: CTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGACCAGAGCTGAGAGAGAGAGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR GCA 72 bp | GGTAGCTCCGACAGGTTTCAGGCAGGCAAATCTTACTaGAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GSSDRFQAGKSY*RESKPLSLSSG Trigger: ACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTGAAACCTGTCGGAGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCTACTCAAAGAGAGGAGTGTaGGCTCTGCCCCAGTCACTT | + |
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Preference number: 3 (lower is better) Translates to: PEFKVSGVQREESSESIYSKRGV*ALPQSL Trigger: AAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGA...GTAGATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTACACTGCGCGGAGGGTaGGCGTGCGGGCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCTLRGG*ACGRWG Trigger: GCCCCAGCGCCCGCACGCTCACCCTCCGCGCAGTGT...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTCGCCAGACGAGCGGTTaGGGGCCCAGCCGGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCRQTSG*GPSRGG Trigger: TCCTCCCCGGCTGGGCCCGCAACCGCTCGTCTGGCG...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTTCCAGGTATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCCGCCCATGGGCCCTaGGCACGGTGGGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPSRYWLCPLPLEPPSQPPAHGP*ARWAWR Trigger: TCTCCATGCCCACCGTGCCCAGGGCCCATGGGCGGG...CGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTGCTTGGCCCTGGCCCTaGGTGGCCGTGAAGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCAWPWP*VAVKMS Trigger: GGACATCTTCACGGCCACCCAGGGCCAGGGCCAAGC...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTTCCAGGTATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGACCCGCTGTAGGGCTTaGCCCTGGCCCTGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPSRYWLCPLPLEPPSQPTRCRA*PWPWVA Trigger: GGCCACCCAGGGCCAGGGCCAAGCCCTACAGCGGGT...CGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCGGGCGAGGGAGCCGTaGAGGCAGTGGAGCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: QAGKSYCRESKPLSLSSGRAREP*RQWSQR Trigger: ACGCTGGCTCCACTGCCTTCACGGCTCCCTCGCCCG...ACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | GTTCCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCGGGCTGAGCGGCCCCTaGAGCCGTTCGCAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VPEFKVSGVQREESSESIGLSGP*SRSQPA Trigger: TGCGGGCTGCGAACGGCTGCAGGGGCCGCTCAGCCC...GATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | TATCTCTCTGATGACCCCAGCATTCTGAGACTGGGACTCGAGGCTTGGGCTACATCTCCGGCTGATGGGTaGGGGCCGGGAGCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: YLSDDPSILRLGLEAWATSPADG*GPGAGT Trigger: TGTGCCGGCTCCCGGCCCGCACCCATCAGCCGGAGA...TGTAGCCCAAGCCTCGAGTCCCAGTCTCAGAATGCTGGGGTCATCAGAGAGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATGGTTCCAGTGGGCACGGTGGGCATaGAGAGCCCTCGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YWLCPLPLEPPSQPPWFQWARWA*RALAPS Trigger: GGAGGGAGCGAGGGCTCTCCATGCCCACCGTGCCCA...CTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | CCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCTACGGGCCCTGGGCACGGTaGGCATGGAGAGCCCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: PEFKVSGVQREESSESIYGPWAR*AWRALA Trigger: AGCGAGGGCTCTCCATGCCCACCGTGCCCAGGGCCC...GTAGATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTTCCAGGTATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGTGTAGGGCTTGGCCCTaGCCCTGGGTGGCCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPSRYWLCPLPLEPPSQPCRAWP*PWVAVK Trigger: CTTCACGGCCACCCAGGGCCAGGGCCAAGCCCTACA...CGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTCTCAGCCGCCATGGTTCCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGACGCTGGTGCTGTATaGGGGGCACGAGTAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLLSRHGSRIQGQWGTEGDAGAV*GARVER Trigger: GCGCTCTACTCGTGCCCCGCATACAGCACCAGCGTC...TCCCTCTGTACCCCACTGACCTTGAATTCTGGAACCATGGCGGCTGAGAAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCGGGTTTGCGGTCCCTaGTGGGAGGCCAGCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: QAGKSYCRESKPLSLSSGRVCGP*WEASLH Trigger: ATGGAGGCTGGCCTCCCAGCAGGGACCGCAAACCCG...ACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTGTCCTCGGGCTTCTGTaGCTCGTCCTCGTCGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCVLGLL*LVLVVL Trigger: AAGAACGACGAGGACGAGCCACAGAAGCCCGAGGAC...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | ACTGACTCCCTTAACCAGAAGTTCCGTGGTAGCTCCGACAGGTTTCAGGCAGGCACCACAGTTTGGGCTTaGCTAGCACGGCCGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TDSLNQKFRGSSDRFQAGTTVWA*LARPEA Trigger: CGCCTCCGGCCGTGCTAGCCAAGCCCAAACTGTGGT...GCCTGCCTGAAACCTGTCGGAGCTACCACGGAACTTCTGGTTAAGGGAGTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | GTTCCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCTGCGGGGCCCCGAAATaGCGCTGGTGCTGTATGCGG | + |
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Preference number: 4 (lower is better) Translates to: VPEFKVSGVQREESSESICGAPK*RWCCMR Trigger: CCGCATACAGCACCAGCGTCATTTCGGGGCCCCGCA...GATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | ACTGACTCCCTTAACCAGAAGTTCCGTGGTAGCTCCGACAGGTTTCAGGCAGGCCCAGAGACCACAGTTTaGGCTTGGCTAGCACGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TDSLNQKFRGSSDRFQAGPETTV*AWLARP Trigger: CGGCCGTGCTAGCCAAGCCCAAACTGTGGTCTCTGG...GCCTGCCTGAAACCTGTCGGAGCTACCACGGAACTTCTGGTTAAGGGAGTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGCCCTGGGTGGCCGTaGAGATGTCCGAAGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FQAGKSYCRESKPLSLSSGPGWP*RCPKEP Trigger: TGGCTCCTTCGGACATCTTCACGGCCACCCAGGGCC...AGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATGGTTCCAGCTCGCTGCGGTTCCGTaGCGTCCACGTCATCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: YWLCPLPLEPPSQPPWFQLAAVP*RPRHLV Trigger: AACAAGATGACGTGGACGCCACGGAACCGCAGCGAG...CTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTCATAGGGGGAGTCTTTaGACAGGTCTAGCTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCHRGSL*TGLAET Trigger: AGTCTCAGCTAGACCTGTGCAAAGACTCCCCCTATG...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | GGGCCAGTCTGTGCGCTCAAAGAGAGGAGTGTTGGCTCTGCCCCAGTCACTTGTTCTGGTTTAATCCATTaGAATGAGAGCCAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: GPVCALKERSVGSAPVTCSGLIH*NESQDP Trigger: CGGGTCCTGGCTCTCATTTCAATGGATTAAACCAGA...ACAAGTGACTGGGGCAGAGCCAACACTCCTCTCTTTGAGCGCACAGACTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CCA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATGGTTCCAGCCTCACGGTCGCGGATaGCACAGTCACTTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: YWLCPLPLEPPSQPPWFQPHGRG*HSHFLQ Trigger: TTGAAGAAAGTGACTGTGCCATCCGCGACCGTGAGG...CTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| 3UTR CAA 72 bp | AGCCTCTCTCTCTCAGCTCTGGTCTCCTTCCAGGTATaGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SLSLSALVSFQV*ALSSSTGTSFS Trigger: TGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATACCTGGAAGGAGACCAGAGCTGAGAGAGAGAGGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAACACTGCGCGGAGGGTaGGCGTGCGGGCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLITLRGG*ACGRWG Trigger: GCCCCAGCGCCCGCACGCTCACCCTCCGCGCAGTGT...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | GTTCCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCTTGCACAGGTCTAGCTaGGACTGGCTCCGCAACATT | + |
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Preference number: 4 (lower is better) Translates to: VPEFKVSGVQREESSESILHRSS*DWLRNI Trigger: AATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAA...GATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGGGCTGAGCGGCCCCTaGAGCCGTTCGCAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIGLSGP*SRSQPA Trigger: TGCGGGCTGCGAACGGCTGCAGGGGCCGCTCAGCCC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACGCCAGACGAGCGGTTaGGGGCCCAGCCGGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIRQTSG*GPSRGG Trigger: TCCTCCCCGGCTGGGCCCGCAACCGCTCGTCTGGCG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACGGGCGAGGGAGCCGTaGAGGCAGTGGAGCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIRAREP*RQWSQR Trigger: ACGCTGGCTCCACTGCCTTCACGGCTCCCTCGCCCG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATGGTTCCAGTTTAATCCATTGAAATaGGAGCCAGGACCCGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: YWLCPLPLEPPSQPPWFQFNPLK*EPGPAV Trigger: TACAGCGGGTCCTGGCTCTCATTTCAATGGATTAAA...CTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATCTCCGGCTGATGGGTaGGGGCCGGGAGCCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLISPADG*GPGAGT Trigger: TGTGCCGGCTCCCGGCCCGCACCCATCAGCCGGAGA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGGGCCCTGGGCACGGTaGGCATGGAGAGCCCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIGPWAR*AWRALA Trigger: AGCGAGGGCTCTCCATGCCCACCGTGCCCAGGGCCC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCCGCCCATGGGCCCTaGGCACGGTGGGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPAHGP*ARWAWR Trigger: TCTCCATGCCCACCGTGCCCAGGGCCCATGGGCGGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAACCCGCTGTAGGGCTTaGCCCTGGCCCTGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLITRCRA*PWPWVA Trigger: GGCCACCCAGGGCCAGGGCCAAGCCCTACAGCGGGT...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR GCA 90 bp | TTTCAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTATAGGAGCCCAGAGGTaGTGCATAAGGGTGATATCC | + |
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Preference number: 4 (lower is better) Translates to: FQAGKSYCRESKPLSLSSIGAQR*CIRVIS Trigger: GGATATCACCCTTATGCAGCACCTCTGGGCTCCTAT...AGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCTCCTCGTCCTCGCTaGGGTTCCGTGGCGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPPRPR*GSVAST Trigger: CGTGGACGCCACGGAACCGCAGCGAGGACGAGGAGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAAGGCGGTGGCGGAGGTaGCGGTGGCGAGTGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIRRWRR*RWRVDD Trigger: GTCATCCACTCGCCACCGCCACCTCCGCCACCGCCT...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATGGGCACGGTGGGCATaGAGAGCCCTCGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIWARWA*RALAPS Trigger: GGAGGGAGCGAGGGCTCTCCATGCCCACCGTGCCCA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATGCGGGGCCCCGAAATaGCGCTGGTGCTGTATGCGG | + |
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Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLICGAPK*RWCCMR Trigger: CCGCATACAGCACCAGCGTCATTTCGGGGCCCCGCA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACTCCGCCCCCGTCCTTaGCCTTGTCCGAGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLILRPRP*PCPRMW Trigger: CCACATCCTCGGACAAGGTCAAGGACGGGGGCGGAG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGGCCCTGGGTGGCCGTaGAGATGTCCGAAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIGPGWP*RCPKEP Trigger: TGGCTCCTTCGGACATCTTCACGGCCACCCAGGGCC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGCTTGGCCCTGGCCCTaGGTGGCCGTGAAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIAWPWP*VAVKMS Trigger: GGACATCTTCACGGCCACCCAGGGCCAGGGCCAAGC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATGTAGGGCTTGGCCCTaGCCCTGGGTGGCCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLICRAWP*PWVAVK Trigger: CTTCACGGCCACCCAGGGCCAGGGCCAAGCCCTACA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGACGCTGGTGCTGTATaGGGGGCACGAGTAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIDAGAV*GARVER Trigger: GCGCTCTACTCGTGCCCCGCATACAGCACCAGCGTC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAACCACAGTTTGGGCTTaGCTAGCACGGCCGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLITTVWA*LARPEA Trigger: CGCCTCCGGCCGTGCTAGCCAAGCCCAAACTGTGGT...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCAGAGACCACAGTTTaGGCTTGGCTAGCACGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPETTV*AWLARP Trigger: CGGCCGTGCTAGCCAAGCCCAAACTGTGGTCTCTGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACTCGCTGCGGTTCCGTaGCGTCCACGTCATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLILAAVP*RPRHLV Trigger: AACAAGATGACGTGGACGCCACGGAACCGCAGCGAG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGTCCTCGGGCTTCTGTaGCTCGTCCTCGTCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIVLGLL*LVLVVL Trigger: AAGAACGACGAGGACGAGCCACAGAAGCCCGAGGAC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATTGCACAGGTCTAGCTaGGACTGGCTCCGCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLILHRSS*DWLRNI Trigger: AATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAATAGGAGCCCAGAGGTaGTGCATAAGGGTGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIIGAQR*CIRVIS Trigger: GGATATCACCCTTATGCAGCACCTCTGGGCTCCTAT...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACATAGGGGGAGTCTTTaGACAGGTCTAGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIHRGSL*TGLAET Trigger: AGTCTCAGCTAGACCTGTGCAAAGACTCCCCCTATG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATCTGGTTTAATCCATTaGAATGAGAGCCAGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLISGLIH*NESQDP Trigger: CGGGTCCTGGCTCTCATTTCAATGGATTAAACCAGA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATATTTAATCCATTGAAATaGGAGCCAGGACCCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSLGDGKITAKAMVLIFNPLK*EPGPAV Trigger: TACAGCGGGTCCTGGCTCTCATTTCAATGGATTAAA...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS GCA 90 bp | GCGCGGAGGGTGAGCGTGCGGGCGCTGGGGCAGGAGACGCGCGGCTaGCTCCAAGCGTTTGCCCGCCCATGGGCCCTGGGCACGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRVSVRALGQETRG*LQAFARPWALGTVG Trigger: GCCCACCGTGCCCAGGGCCCATGGGCGGGCAAACGCTTGGAGGCAGCCGCGCGTCTCCTGCCCCAGCGCCCGCACGCTCACCCTCCGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
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| CDS CCA 90 bp | AGGAGACGCGCGGCTGCCTCCAAGCGTTTGCCCGCCCATGGGCCCTaGGCACGGTGGGCATGGAGAGCCCTCGCTCCCTCCGCCCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRAAASKRLPAHGP*ARWAWRALAPSAPV Trigger: GACGGGGGCGGAGGGAGCGAGGGCTCTCCATGCCCACCGTGCCCAGGGCCCATGGGCGGGCAAACGCTTGGAGGCAGCCGCGCGTCTCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CCA 90 bp | CTGGGGCAGGAGACGCGCGGCTGCCTCCAAGCGTTTGCCCGCCCATaGGCCCTGGGCACGGTGGGCATGGAGAGCCCTCGCTCCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGQETRGCLQAFARP*ALGTVGMESPRSLR Trigger: GCGGAGGGAGCGAGGGCTCTCCATGCCCACCGTGCCCAGGGCCCATGGGCGGGCAAACGCTTGGAGGCAGCCGCGCGTCTCCTGCCCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS TCA 90 bp | CGGCGCCGTACTGGAGGTGCGAGTTGTAGCCGGGCGAGGGAGCCGTaGAGGCAGTGGAGCCAGCGTAGGGCGAGAACGCGGAGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRTGGASCSRAREP*RQWSQRRARTRSPK Trigger: CTTCGGGCTCCGCGTTCTCGCCCTACGCTGGCTCCACTGCCTTCACGGCTCCCTCGCCCGGCTACAACTCGCACCTCCAGTACGGCGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS-3UTR CAA 90 bp | ACTGACTCCCTTAACCAGAAGTTCCGTGGTAGCTCCGACAGGTTTCAGGCAGGCCTGCCTTCGGTCTCCTaGCCGGCGGGGCTGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSLNQKFRGSSDRFQAGLPSVS*PAGLSG Trigger: GCCGCTCAGCCCCGCCGGCAAGGAGACCGAAGGCAG...GCCTGCCTGAAACCTGTCGGAGCTACCACGGAACTTCTGGTTAAGGGAGTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS CCA 90 bp | ATTGAAATGAGAGCCAGGACCCGCTGTAGGGCTTGGCCCTGGCCCTaGGTGGCCGTGAAGATGTCCGAAGGAGCCATAGTTCGTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IEMRARTRCRAWPWP*VAVKMSEGAIVRVA Trigger: GGCTACACGAACTATGGCTCCTTCGGACATCTTCACGGCCACCCAGGGCCAGGGCCAAGCCCTACAGCGGGTCCTGGCTCTCATTTCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CCA 90 bp | CCAGCCTCCATCCACAAGGCCGCAGGCCACCCTCACGGTCGCGGATaGCACAGTCACTTTCTTCAACTCATAGGGGGAGTCTTTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PASIHKAAGHPHGRG*HSHFLQLIGGVFAQ Trigger: CTGTGCAAAGACTCCCCCTATGAGTTGAAGAAAGTGACTGTGCCATCCGCGACCGTGAGGGTGGCCTGCGGCCTTGTGGATGGAGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
||
| CDS GCA 90 bp | CTTCCGGTACGCGGGGTCCCCATAAGGATAGGAGCCCAGAGGTGCTaGATAAGGGTGATATCCCAAGGAACCTGCCATACCGGGAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPVRGVPIRIGAQRC*IRVISQGTCHTGSV Trigger: CACACTCCCGGTATGGCAGGTTCCTTGGGATATCACCCTTATGCAGCACCTCTGGGCTCCTATCCTTATGGGGACCCCGCGTACCGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
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| CDS-3UTR CAA 90 bp | CCAGAATTCAAGGTCAGTGGGGTACAGAGGGAGGAAAGCTCTGAGAGCATCTACCCCTCGAGGTCGCCCTaGTCCTCGGGCTTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PEFKVSGVQREESSESIYPSRSP*SSGFCG Trigger: GCCACAGAAGCCCGAGGACAAGGGCGACCTCGAGGG...GTAGATGCTCTCAGAGCTTTCCTCCCTCTGTACCCCACTGACCTTGAATTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CAA 90 bp | TATTGGCTCTGTCCTCTTCCACTGGAACCTCCTTCTCAGCCGCCATGGTTCCAGGCCAGAGACCACAGTTaGGGCTTGGCTAGCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YWLCPLPLEPPSQPPWFQARDHS*GLASTA Trigger: GGCCGTGCTAGCCAAGCCCAAACTGTGGTCTCTGGC...CTGGAACCATGGCGGCTGAGAAGGAGGTTCCAGTGGAAGAGGACAGAGCCAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGCAAATCTTACTGCAGGGAGTCAAAGCCTCTCTCTCTCAGCTCTGGTCCTCCGCCCCCGTCCTaGACCTTGTCCGAGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QAGKSYCRESKPLSLSSGPPPPS*TLSEDV Trigger: CACATCCTCGGACAAGGTCAAGGACGGGGGCGGAGG...ACCAGAGCTGAGAGAGAGAGGCTTTGACTCCCTGCAGTAAGATTTGCCTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CAA 90 bp | TATCTCTCTGATGACCCCAGCATTCTGAGACTGGGACTCGAGGCTTGGGCTACACCCCCGTCCTTGACCTaGTCCGAGGATGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: YLSDDPSILRLGLEAWATPPSLT*SEDVAI Trigger: GATCGCCACATCCTCGGACAAGGTCAAGGACGGGGG...TGTAGCCCAAGCCTCGAGTCCCAGTCTCAGAATGCTGGGGTCATCAGAGAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS GCA 90 bp | ATTCTTCCGGTACGCGGGGTCCCCATAAGGATAGGAGCCCAGAGGTaGTGCATAAGGGTGATATCCCAAGGAACCTGCCATACCGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILPVRGVPIRIGAQR*CIRVISQGTCHTGS Trigger: ACTCCCGGTATGGCAGGTTCCTTGGGATATCACCCTTATGCAGCACCTCTGGGCTCCTATCCTTATGGGGACCCCGCGTACCGGAAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
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| CDS GCA 90 bp | TCGCGGATGGCACAGTCACTTTCTTCAACTCATAGGGGGAGTCTTTaGACAGGTCTAGCTGAGACTGGCTCCGCAACATTTTCGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRMAQSLSSTHRGSL*TGLAETGSATFSGL Trigger: AAGACCCGAAAATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAAAGACTCCCCCTATGAGTTGAAGAAAGTGACTGTGCCATCCGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACTGCCTTCGGTCTCCTaGCCGGCGGGGCTGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLILPSVS*PAGLSG Trigger: GCCGCTCAGCCCCGCCGGCAAGGAGACCGAAGGCAG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCCTCGAGGTCGCCCTaGTCCTCGGGCTTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPSRSP*SSGFCG Trigger: GCCACAGAAGCCCGAGGACAAGGGCGACCTCGAGGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGACCACAGTTTGGGCTaGGCTAGCACGGCCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLIDHSLG*ASTAGG Trigger: GCCTCCGGCCGTGCTAGCCAAGCCCAAACTGTGGTC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCTCCGCCCCCGTCCTaGACCTTGTCCGAGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPPPPS*TLSEDV Trigger: CACATCCTCGGACAAGGTCAAGGACGGGGGCGGAGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATAGCCAGAGACCACAGTTaGGGCTTGGCTAGCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLIARDHS*GLASTA Trigger: GGCCGTGCTAGCCAAGCCCAAACTGTGGTCTCTGGC...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTCTCTCTTGGTGATGGAAAAATAACTGCCAAGGCCATGGTTTTAATACCCCCGTCCTTGACCTaGTCCGAGGATGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSLGDGKITAKAMVLIPPSLT*SEDVAI Trigger: GATCGCCACATCCTCGGACAAGGTCAAGGACGGGGG...TATTAAAACCATGGCCTTGGCAGTTATTTTTCCATCACCAAGAGAGAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
||
| CDS CCA 72 bp | GCCCAGCCGGGGAGGACTCGCCCGCGCGCGGGGGCCTaGGCAGCTCATCGTGGCGGCCTTCGGAGGACGACT | + |
|
Preference number: 6 (lower is better) Translates to: AQPGRTRPRAGA*AAHRGGLRRTT Trigger: AGTCGTCCTCCGAAGGCCGCCACGATGAGCTGCCCAGGCCCCCGCGCGCGGGCGAGTCCTCCCCGGCTGGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
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| CDS GCA 72 bp | GTAGTGAGGACCCGCGTCTTCCGCCAGACGAGCGGTTaGGGGCCCAGCCGGGGAGGACTCGCCCGCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVRTRVFRQTSG*GPSRGGLARAR Trigger: CCGCGCGCGGGCGAGTCCTCCCCGGCTGGGCCCGCAACCGCTCGTCTGGCGGAAGACGCGGGTCCTCACTAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS GCA 72 bp | GTGAGCGTGCGGGCGCTGGGGCAGGAGACGCGCGGCTaGCTCCAAGCGTTTGCCCGCCCATGGGCCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSVRALGQETRG*LQAFARPWALG Trigger: GCCCAGGGCCCATGGGCGGGCAAACGCTTGGAGGCAGCCGCGCGTCTCCTGCCCCAGCGCCCGCACGCTCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS GCA 72 bp | GGCCGGGACAGCACCGTCCCGCCCGGAAAGGGACACTaGGCGGAGGGTGAGCGTGCGGGCGCTGGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRDSTVPPGKGH*AEGERAGAGAG Trigger: TCCTGCCCCAGCGCCCGCACGCTCACCCTCCGCGCAGTGTCCCTTTCCGGGCGGGACGGTGCTGTCCCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS GCA 72 bp | CCTTCGGTCTCCTTGCCGGCGGGGCTGAGCGGCCCCTaGAGCCGTTCGCAGCCCGCAGTCGCCTTCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSVSLPAGLSGP*SRSQPAVAFCS Trigger: AGAGCAGAAGGCGACTGCGGGCTGCGAACGGCTGCAGGGGCCGCTCAGCCCCGCCGGCAAGGAGACCGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS GCA 72 bp | GGCCCCTGCAGCCGTTCGCAGCCCGCAGTCGCCTTCTaGTCTGCTCCTCCTGATTCGGGGCCCTCGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPCSRSQPAVAF*SAPPDSGPSRS Trigger: CGACCTCGAGGGCCCCGAATCAGGAGGAGCAGAGCAGAAGGCGACTGCGGGCTGCGAACGGCTGCAGGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CCA 72 bp | GACTCGCCCGCGCGCGGGGGCCTGGGCAGCTCATCGTaGCGGCCTTCGGAGGACGACTCCTTAAAATCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DSPARGGLGSSS*RPSEDDSLKSE Trigger: CTCGGATTTTAAGGAGTCGTCCTCCGAAGGCCGCCACGATGAGCTGCCCAGGCCCCCGCGCGCGGGCGAGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS TCA 72 bp | ACTGGAGGTGCGAGTTGTAGCCGGGCGAGGGAGCCGTaGAGGCAGTGGAGCCAGCGTAGGGCGAGAACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TGGASCSRAREP*RQWSQRRARTR Trigger: CCGCGTTCTCGCCCTACGCTGGCTCCACTGCCTTCACGGCTCCCTCGCCCGGCTACAACTCGCACCTCCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CAA 72 bp | TCTGCTCCTCCTGATTCGGGGCCCTCGAGGTCGCCCTaGTCCTCGGGCTTCTGTGGCTCGTCCTCGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAPPDSGPSRSP*SSGFCGSSSSF Trigger: GAACGACGAGGACGAGCCACAGAAGCCCGAGGACAAGGGCGACCTCGAGGGCCCCGAATCAGGAGGAGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CAA 90 bp | GCCTTCTGCTCTGCTCCTCCTGATTCGGGGCCCTCGAGGTCGCCCTaGTCCTCGGGCTTCTGTGGCTCGTCCTCGTCGTTCTTCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AFCSAPPDSGPSRSP*SSGFCGSSSSFFSR Trigger: TCTGGAGAAGAACGACGAGGACGAGCCACAGAAGCCCGAGGACAAGGGCGACCTCGAGGGCCCCGAATCAGGAGGAGCAGAGCAGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CCA 72 bp | GGGGCCCTCGAGGTCGCCCTTGTCCTCGGGCTTCTGTaGCTCGTCCTCGTCGTTCTTCTCCAGATCGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: GALEVALVLGLL*LVLVVLLQIDV Trigger: AACATCGATCTGGAGAAGAACGACGAGGACGAGCCACAGAAGCCCGAGGACAAGGGCGACCTCGAGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
||
| CDS CCA 72 bp | ATCCACAAGGCCGCAGGCCACCCTCACGGTCGCGGATaGCACAGTCACTTTCTTCAACTCATAGGGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IHKAAGHPHGRG*HSHFLQLIGGV Trigger: GACTCCCCCTATGAGTTGAAGAAAGTGACTGTGCCATCCGCGACCGTGAGGGTGGCCTGCGGCCTTGTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
||
| CDS TCA 72 bp | GCACGATTCAACACCGTCTGGTTTAATCCATTGAAATaGGAGCCAGGACCCGCTGTAGGGCTTGGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ARFNTVWFNPLK*EPGPAVGLGPG Trigger: GCCAGGGCCAAGCCCTACAGCGGGTCCTGGCTCTCATTTCAATGGATTAAACCAGACGGTGTTGAATCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034184.12 ENSMUST00000210246.2 |
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| CDS GCA 72 bp | CGGACATACCTTTCTTCAACTCATAGGGGGAGTCTTTaGACAGGTCTAGCTGAGACTGGCTCCGCAACATTT | + |
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Preference number: 6 (lower is better) Translates to: RTYLSSTHRGSL*TGLAETGSATF Trigger: AAATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAAAGACTCCCCCTATGAGTTGAAGAAAGGTATGTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034184.12 |
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| CDS GCA 72 bp | GCACAGTCACTTTCTTCAACTCATAGGGGGAGTCTTTaGACAGGTCTAGCTGAGACTGGCTCCGCAACATTT | + |
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Preference number: 6 (lower is better) Translates to: AQSLSSTHRGSL*TGLAETGSATF Trigger: AAATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAAAGACTCCCCCTATGAGTTGAAGAAAGTGACTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210246.2 |
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