Pregenerated sensors for IRX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021604Ensembl transcript IDs: ENSMUST00000022095.10, ENSMUST00000176684.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTaGACGCAACATCAGGTAAAACCTGGTGATAGAACGCGAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: ALRSSHLPGVKGWLR*TQHQVKPGDRTRGV Trigger: AACTCCTCGCGTTCTATCACCAGGTTTTACCTGATGTTGCGTCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGTCAGCGCCTGCAGCCTaGGCGCCAGTTCCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLAILAWKFPLLLETHLKSAPAA*APVPFS Trigger: GGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGA...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAGTCGAGTCAAGAGTGTaGAACAGTGTAAACTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: ISLPLKQAITGVNIHFRKVESRV*NSVNSV Trigger: CACCGAGTTTACACTGTTGCACACTCTTGACTCGAC...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGTTGGCAATCTTGGCTaGGAAATTCCCCCTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: GGLPSAVLSGLLIFLELRVGNLG*EIPPSF Trigger: AAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAAC...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR GCA 72 bp | TTGGAAACCCATTTAAAGCAGTTCAGAGTCAGCGCCTaGAGCCTGAGCGCCAGTTCCCTTCTCCACTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LETHLKQFRVSA*SLSASSLLHCA Trigger: TGCACAGTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAAATGGGTTTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR CCA 72 bp | GCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATaGCTCAGGTGGACGCAACATCAGGTAAAACCTGGT | + |
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Preference number: 3 (lower is better) Translates to: ALRSSHLPGVKG*LRWTQHQVKPG Trigger: ACCAGGTTTTACCTGATGTTGCGTCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR CCA 72 bp | AGTTCAAATCCTCTGTCTCAAGTGGGTTGGCAATCTTaGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATT | + |
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Preference number: 3 (lower is better) Translates to: SSNPLSQVGWQS*LGNSPFFWKPI Trigger: AATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCCACTTGAGACAGAGGATTTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR CCA 72 bp | AAATCCTCTGTCTCAAGTGGGTTGGCAATCTTGGCTTaGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: KSSVSSGLAILA*KFPLLLETHLK Trigger: CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCCACTTGAGACAGAGGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAATCTGTCTCAAGTGGGTaGGCAATCTTGGCTTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ISLPLKQAITGVNIHFRKSVSSG*AILAWK Trigger: TTTCCAAGCCAAGATTGCCAACCCACTTGAGACAGA...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAAAATTCCCCCTTCTTTaGGAAACCCATTTAAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ISLPLKQAITGVNIHFRKKFPLL*ETHLKQ Trigger: CTGCTTTAAATGGGTTTCCAAAAGAAGGGGGAATTT...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGCCCCAGAAGGGGCCGTaGCTGCAGGTGAGGACGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRPQKGP*LQVRTL Trigger: CAGCGTCCTCACCTGCAGTCACGGCCCCTTCTGGGG...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGGAGGCCCCTGCAGGTaGGACGTCTTGGGGCACCGT | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRGGPCR*DVLGHR Trigger: ACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCC...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGACCCGGGTGGCATTCTTaGGCCGCGTGCCGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGPGWHS*AACRCP Trigger: TGGACAGCGGCACGCGGCGCAAGAATGCCACCCGGG...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGACATTCTTGCGCCGCGTaGCGCTGTCCACGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGHSCAA*RCPRSR Trigger: ACGGGACCGTGGACAGCGGCACGCGGCGCAAGAATG...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGAGCGGTGGCTGTGTGTaGCAAGGACCAGATGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRSGGCV*QGPDAG Trigger: CCCCGCATCTGGTCCTTGGCACACACAGCCACCGCT...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACGAGAGGCTCCTCCCGTaGCTCCTCCTCTCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHERLLP*LLLSSL Trigger: GAGGCTGGAGAGGAGGAGTCACGGGAGGAGCCTCTC...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACAGGCTGCAGCTGCAGTaGGTGGTAGGCCGGCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHRLQLQ*VVGRRV Trigger: CACACGCCGGCCTACCACCCACTGCAGCTGCAGCCT...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGAGGCCTTCAGTGTGCTaGTGGTCTCCCGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRRPSVC*WSPGWH Trigger: ATGCCACCCGGGAGACCACCAGCACACTGAAGGCCT...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCCCCCAGAAGGGGCCGTaGCTGCAGGTGAGGACGCTG | + |
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Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSPQKGP*LQVRTL Trigger: CAGCGTCCTCACCTGCAGTCACGGCCCCTTCTGGGG...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGCATTCTTGCGCCGCGTaGCGCTGTCCACGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: IGCALRSSHLPGVKGWLRHSCAA*RCPRSR Trigger: ACGGGACCGTGGACAGCGGCACGCGGCGCAAGAATG...CCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCCCCGGGTGGCATTCTTaGGCCGCGTGCCGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSPGWHS*AACRCP Trigger: TGGACAGCGGCACGCGGCGCAAGAATGCCACCCGGG...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGAGCCGGGATCCAGAAGTaGGCCCTTAGCGGTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGAGIQK*ALSGGP Trigger: TGGGCCACCGCTAAGGGCGCACTTCTGGATCCCGGC...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | ATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGGTTCGTGGCGTGCAGTaGCCAGCAGCCGGCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: IGCALRSSHLPGVKGWLRVRGVQ*PAAGSR Trigger: ACGAGAGCCGGCTGCTGGCCACTGCACGCCACGAAC...CCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | TTTGGAAACCCATTTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGGAGAGGCTCCTCCCGTaGCTCCTCCTCTCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FGNPFKAVQSQRLQPERQERLLP*LLLSSL Trigger: GAGGCTGGAGAGGAGGAGTCACGGGAGGAGCCTCTC...CTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAAATGGGTTTCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGAGCCGGGACCATCAGATaGAGCAGGAATCCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGAGTIR*SRNPLW Trigger: CCAGAGAGGATTCCTGCTTCATCTGATGGTCCCGGC...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACTACGGGTTCTTCCGGTaGTCCTGCAGCCAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHYGFFR*SCSQAF Trigger: GAAGGCCTGGCTGCAGGAGCACCGGAAGAACCCGTA...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGAGCTCAGAGCTGTGGCTaGAGCAGCGGTGGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGAQSCG*SSGGCV Trigger: CACACAGCCACCGCTGCTGCAGCCACAGCTCTGAGC...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCGTTCGTGGCGTGCAGTaGCCAGCAGCCGGCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSVRGVQ*PAAGSR Trigger: ACGAGAGCCGGCTGCTGGCCACTGCACGCCACGAAC...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGATCTGGCTCAGAGCTGTaGCTGCAGCAGCGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGSGSEL*LQQRWL Trigger: CAGCCACCGCTGCTGCAGCCACAGCTCTGAGCCAGA...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGAGTTACTGGGGAGTCCTaGTGCCTATCCAGAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGVTGES*CLSRAP Trigger: TGGGGCTCTGGATAGGCACCAGGACTCCCCAGTAAC...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACGCCGGGACCATCAGATaGAGCAGGAATCCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHAGTIR*SRNPLW Trigger: CCAGAGAGGATTCCTGCTTCATCTGATGGTCCCGGC...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | TTTGGAAACCCATTTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGGCTCAGAGCTGTGGCTaGAGCAGCGGTGGCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FGNPFKAVQSQRLQPERQAQSCG*SSGGCV Trigger: CACACAGCCACCGCTGCTGCAGCCACAGCTCTGAGC...CTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAAATGGGTTTCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACCCTTCAGTGTGCTGGTaGTCTCCCGGGTGGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHPSVCW*SPGWHS Trigger: AGAATGCCACCCGGGAGACCACCAGCACACTGAAGG...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGAAGGCCTTCAGTGTGCTaGTGGTCTCCCGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGRPSVC*WSPGWH Trigger: ATGCCACCCGGGAGACCACCAGCACACTGAAGGCCT...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGTCTTCTCTCCTTTGGTaGGGTACGGGTTCTTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRSSLLW*GTGSSG Trigger: ACCGGAAGAACCCGTACCCCACCAAAGGAGAGAAGA...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGACCACTATCCAGGGACTaGAAGGGCGTCTTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGPLSRD*KGVFSS Trigger: TGAGCTGAAGACGCCCTTCCAGTCCCTGGATAGTGG...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACGCGGTGGCCCAGGCCTaGTTCAAAGTGCTGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHAVAQA*FKVLCL Trigger: TAGACACAGCACTTTGAACCAGGCCTGGGCCACCGC...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGACTGGGGAGTCCTGGTaGCTATCCAGAGCCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: IGCALRSSHLPGVKGWLRTGESW*LSRAPE Trigger: TTCTGGGGCTCTGGATAGGCACCAGGACTCCCCAGT...CCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACGTACTGGCTCAGAGCTaGCTCATACGGGTAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHVLAQS*LIRVVG Trigger: GCCTACTACCCGTATGAGCCAGCTCTGAGCCAGTAC...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGCTGTCATATGGGTACTaGCTCAGAGCTGGCTCATAC | + |
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Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRLSYGY*LRAGSY Trigger: GTATGAGCCAGCTCTGAGCCAGTACCCATATGACAG...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATCTGAGGCTAGTTACTaGGGAGTCCTGGTGCCTATC | + |
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Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGSEASY*GVLVPI Trigger: GATAGGCACCAGGACTCCCCAGTAACTAGCCTCAGA...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGGTAGACGGGCGCCTGTaGCGAGGCTGCAGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKVDGRL*RGCRPG Trigger: TCCGGGCCTGCAGCCTCGGCACAGGCGCCCGTCTAC...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGACATAGGTCACGTAGTTaGCATAGCCCTGCGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGHRSRS*HSPASC Trigger: GCAGCTCGCAGGGCTATGGCAACTACGTGACCTATG...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGAGAGTAGAAAGCAGATaGCTCAGAGCCATAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRRVESR*LRAIGH Trigger: GTGACCTATGGCTCTGAGGCATCTGCTTTCTACTCT...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGGGGCGCTTCTCATCTaGACATTTATTTCTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLPSAVLSGLLIFLELRGALLI*TFISRW Trigger: CCACCTAGAAATAAATGTGCAGATGAGAAGCGCCCC...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAAACCCATTTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGGCAGAATTGAGTTCGTaGCGTGCAGTGGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGNPFKAVQSQRLQPERQAELSS*RAVASS Trigger: GCTGCTGGCCACTGCACGCCACGAACTCAATTCTGC...CTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAAATGGGTTTCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGGTACTGGCTCAGAGCTaGCTCATACGGGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGCALRSSHLPGVKGWLRVLAQS*LIRVVG Trigger: GCCTACTACCCGTATGAGCCAGCTCTGAGCCAGTAC...CCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGACTGTCATATGGGTACTaGCTCAGAGCTGGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GPPIGCALRSSHLPGVKGLSYGY*LRAGSY Trigger: GTATGAGCCAGCTCTGAGCCAGTACCCATATGACAG...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACTCTTCTCTCCTTTGGTaGGGTACGGGTTCTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHSSLLW*GTGSSG Trigger: ACCGGAAGAACCCGTACCCCACCAAAGGAGAGAAGA...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGACCACTATCCAGGGACTaGAAGGGCGTCTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVLSGLLIFLELRDGSGGPLSRD*KGVFSS Trigger: TGAGCTGAAGACGCCCTTCCAGTCCCTGGATAGTGG...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACAGCAGGAATCCTCTCTaGTCCACTATCCAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHSRNPL*STIQGL Trigger: CAGTCCCTGGATAGTGGACCAGAGAGGATTCCTGCT...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCGTTACTGGGGAGTCCTaGTGCCTATCCAGAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSVTGES*CLSRAP Trigger: TGGGGCTCTGGATAGGCACCAGGACTCCCCAGTAAC...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACTCTGAGGCTAGTTACTaGGGAGTCCTGGTGCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHSEASY*GVLVPI Trigger: GATAGGCACCAGGACTCCCCAGTAACTAGCCTCAGA...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGGGAGGCCCCTGCAGGTaGGACGTCTTGGGGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKGGPCR*DVLGHR Trigger: ACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCC...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAAACCCATTTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGACGTGCTCAGGGAGTTaGTGGTCATCAGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGNPFKAVQSQRLQPERQTCSGS*WSSGTE Trigger: CTCAGTTCCTGATGACCACCAACTCCCTGAGCACGT...CTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAAATGGGTTTCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCAGCAGGAATCCTCTCTaGTCCACTATCCAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSSRNPL*STIQGL Trigger: CAGTCCCTGGATAGTGGACCAGAGAGGATTCCTGCT...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGACAGCGACACAAAACAAGCCTCAGTACCCAAATGCCTTCTCCATGTAAACCGGAGGCAGTTCCTTaGCCTCTCCAGATCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRHKTSLSTQMPSPCKPEAVP*PLQIPI Trigger: GATGGGGATCTGGAGAGGGCAAGGAACTGCCTCCGG...TTTACATGGAGAAGGCATTTGGGTACTGAGGCTTGTTTTGTGTCGCTGTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGAGCGGTGGCTGTGTGTaGCAAGGACCAGATGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKSGGCV*QGPDAG Trigger: CCCCGCATCTGGTCCTTGGCACACACAGCCACCGCT...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGCGCTCTTGGCACTCTTaGGAGGCTCCTCCCGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKRSWHS*EAPPVT Trigger: AGTCACGGGAGGAGCCTCTCAAGAGTGCCAAGAGCG...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCAGTCTTCCAAGTCACTaGGTTCTAGCTCCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSSLPSH*VLAPCR Trigger: ACGACAAGGAGCTAGAACTCAGTGACTTGGAAGACT...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGATTGAGTTCGTGGCGTaGAGTGGCCAGCAGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKIEFVA*SGQQPA Trigger: AGCCGGCTGCTGGCCACTGCACGCCACGAACTCAAT...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCGGGGCGCTTCTCATCTaGACATTTATTTCTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFGRKLYASGGLPSAVLSGALLI*TFISRW Trigger: CCACCTAGAAATAAATGTGCAGATGAGAAGCGCCCC...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAGTAGACGGGCGCCTGTaGCGAGGCTGCAGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKVDGRL*RGCRPG Trigger: TCCGGGCCTGCAGCCTCGGCACAGGCGCCCGTCTAC...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACACATTTATTTCTAGGTaGCCAGGTCATCTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKQFRVSACSLSASSLLHTFISR*PGHLVL Trigger: GAGAACAAGATGACCTGGCCACCTAGAAATAAATGT...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGGCGGTGGCCCAGGCCTaGTTCAAAGTGCTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKAVAQA*FKVLCL Trigger: TAGACACAGCACTTTGAACCAGGCCTGGGCCACCGC...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAGCCGGGATCCAGAAGTaGGCCCTTAGCGGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKAGIQK*ALSGGP Trigger: TGGGCCACCGCTAAGGGCGCACTTCTGGATCCCGGC...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAAGGCTGCAGCTGCAGTaGGTGGTAGGCCGGCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKRLQLQ*VVGRRV Trigger: CACACGCCGGCCTACCACCCACTGCAGCTGCAGCCT...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGGCAATCTTGGCTTGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAAGCGCAGATACACCCGTTaGACCTTGGCGTTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLAILAWKFPLLLETHLKRRYTR*TLAFQH Trigger: ATGCTGAAACGCCAAGGTCCAACGGGTGTATCTGCG...CTTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | AGGAGACAGCGACACAAAACAAGCCTCAGTACCCAAATGCCTTCTCCATGTAAAAGAGTAGAAAGCAGATaGCTCAGAGCCATAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRHKTSLSTQMPSPCKRVESR*LRAIGH Trigger: GTGACCTATGGCTCTGAGGCATCTGCTTTCTACTCT...TTTACATGGAGAAGGCATTTGGGTACTGAGGCTTGTTTTGTGTCGCTGTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAATTGAGTTCGTGGCGTaGAGTGGCCAGCAGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKIEFVA*SGQQPA Trigger: AGCCGGCTGCTGGCCACTGCACGCCACGAACTCAAT...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR GCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAACCGGAGGCAGTTCCTTaGCCTCTCCAGATCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKPEAVP*PLQIPI Trigger: GATGGGGATCTGGAGAGGGCAAGGAACTGCCTCCGG...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| 3UTR CAA 72 bp | CAAATCCTCTGTCTCAAGTGGGTTGGCAATCTTGGCTaGGAAATTCCCCCTTCTTTTGGAAACCCATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QILCLKWVGNLG*EIPPSFGNPFK Trigger: TTTAAATGGGTTTCCAAAAGAAGGGGGAATTTCCAAGCCAAGATTGCCAACCCACTTGAGACAGAGGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAACGTGCTCAGGGAGTTaGTGGTCATCAGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKTCSGS*WSSGTE Trigger: CTCAGTTCCTGATGACCACCAACTCCCTGAGCACGT...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAAGTCTTCCAAGTCACTaGGTTCTAGCTCCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLKQAITGVNIHFRKSLPSH*VLAPCR Trigger: ACGACAAGGAGCTAGAACTCAGTGACTTGGAAGACT...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 90 bp | ACCGGCCTTGGGCGTAGCCAGCAGCTCCCGGGAGGCCCCTGCAGGTaGGACGTCTTGGGGCACCGTGGGCGGGAAGGAGCAAGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGLGRSQQLPGGPCR*DVLGHRGREGASKG Trigger: CCCCTTGCTTGCTCCTTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCCCGGGAGCTGCTGGCTACGCCCAAGGCCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | CCGGCTCTCGTAGACAGGGCAGTAGACGGGCGCCTGTGCCGAGGCTaGAGGCCCGGAATCAGCCAGTGTGCGGCCGCCCGACTCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PALVDRAVDGRLCRG*RPGISQCAAARLAA Trigger: TGCTGCGAGTCGGGCGGCCGCACACTGGCTGATTCCGGGCCTGCAGCCTCGGCACAGGCGCCCGTCTACTGCCCTGTCTACGAGAGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | TTTGCCACCGGCCTTGGGCGTAGCCAGCAGCTCCCGGGAGGCCCCTaGAGGTGGGACGTCTTGGGGCACCGTGGGCGGGAAGGAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FATGLGRSQQLPGGP*RWDVLGHRGREGAS Trigger: GCTTGCTCCTTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCCCGGGAGCTGCTGGCTACGCCCAAGGCCGGTGGCAAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | AGACGGGCGCCTGTGCCGAGGCTGCAGGCCCGGAATCAGCCAGTGTaGGGCCGCCCGACTCGCAGCACGTGCTCAGGGAGTTGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRAPVPRLQARNQPV*GRPTRSTCSGSWWS Trigger: TGACCACCAACTCCCTGAGCACGTGCTGCGAGTCGGGCGGCCGCACACTGGCTGATTCCGGGCCTGCAGCCTCGGCACAGGCGCCCGTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 90 bp | GACCAGATGCGGGGCTTGGTCTCCAGGTTCGGCGGCGCTCCCGCCTaGGCAAAGGTCAGTTTGGCTTCGCAAGCAGGTGGGCCGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DQMRGLVSRFGGAPA*AKVSLASQAGGPPS Trigger: CGAGGGCGGCCCACCTGCTTGCGAAGCCAAACTGACCTTTGCTCAGGCGGGAGCGCCGCCGAACCTGGAGACCAAGCCCCGCATCTGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS GCA 90 bp | GCTCCCGTAGACGCCGAGCGCGGCGGCAGAATTGAGTTCGTGGCGTaGAGTGGCCAGCAGCCGGCTCTCGTAGACAGGGCAGTAGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: APVDAERGGRIEFVA*SGQQPALVDRAVDG Trigger: CCCGTCTACTGCCCTGTCTACGAGAGCCGGCTGCTGGCCACTGCACGCCACGAACTCAATTCTGCCGCCGCGCTCGGCGTCTACGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS GCA 90 bp | GAGCTGTGGCTGCAGCAGCGGTGGCTGTGTGTGCCAAGGACCAGATaGGGGGCTTGGTCTCCAGGTTCGGCGGCGCTCCCGCCTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ELWLQQRWLCVPRTR*GAWSPGSAALPPEQ Trigger: TTGCTCAGGCGGGAGCGCCGCCGAACCTGGAGACCAAGCCCCGCATCTGGTCCTTGGCACACACAGCCACCGCTGCTGCAGCCACAGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS TCA 90 bp | AGCTGCCATAGGGGCTCCCGTAGACGCCGAGCGCGGCGGCAGAATTaGGTTCGTGGCGTGCAGTGGCCAGCAGCCGGCTCTCGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCHRGSRRRRARRQN*VRGVQWPAAGSRRQ Trigger: CTGTCTACGAGAGCCGGCTGCTGGCCACTGCACGCCACGAACTCAATTCTGCCGCCGCGCTCGGCGTCTACGGGAGCCCCTATGGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS CCA 90 bp | TGGTCTCCAGGTTCGGCGGCGCTCCCGCCTGAGCAAAGGTCAGTTTaGCTTCGCAAGCAGGTGGGCCGCCCTCGGCGCCAGAGTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WSPGSAALPPEQRSV*LRKQVGRPRRQSQE Trigger: TTCCTGACTCTGGCGCCGAGGGCGGCCCACCTGCTTGCGAAGCCAAACTGACCTTTGCTCAGGCGGGAGCGCCGCCGAACCTGGAGACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS CCA 90 bp | CTGCAGCAGCGGTGGCTGTGTGTGCCAAGGACCAGATGCGGGGCTTaGTCTCCAGGTTCGGCGGCGCTCCCGCCTGAGCAAAGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQQRWLCVPRTRCGA*SPGSAALPPEQRSV Trigger: AACTGACCTTTGCTCAGGCGGGAGCGCCGCCGAACCTGGAGACCAAGCCCCGCATCTGGTCCTTGGCACACACAGCCACCGCTGCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS GCA 90 bp | CAGGCCCGGAATCAGCCAGTGTGCGGCCGCCCGACTCGCAGCACGTaGTCAGGGAGTTGGTGGTCATCAGGAACTGAGGAGCAGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QARNQPVCGRPTRST*SGSWWSSGTEEQRN Trigger: ATTCCTCTGCTCCTCAGTTCCTGATGACCACCAACTCCCTGAGCACGTGCTGCGAGTCGGGCGGCCGCACACTGGCTGATTCCGGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS CCA 90 bp | AGGAGGGAAACTCAGTCTGGCTCAGAGCTGTGGCTGCAGCAGCGGTaGCTGTGTGTGCCAAGGACCAGATGCGGGGCTTGGTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRETQSGSELWLQQR*LCVPRTRCGAWSPG Trigger: ACCTGGAGACCAAGCCCCGCATCTGGTCCTTGGCACACACAGCCACCGCTGCTGCAGCCACAGCTCTGAGCCAGACTGAGTTTCCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS-3UTR CAA 90 bp | ATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTCCCGGGTGGCATTCTaGCGCCGCGTGCCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGCALRSSHLPGVKGWLRSRVAF*RRVPLS Trigger: GGACAGCGGCACGCGGCGCAAGAATGCCACCCGGGA...CCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGATCCCGGGTGGCATTCTaGCGCCGCGTGCCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVLSGLLIFLELRDGSGGSRVAF*RRVPLS Trigger: GGACAGCGGCACGCGGCGCAAGAATGCCACCCGGGA...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | GGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGAGTGGTGGAGGCCTCCTaGCCTGTGCCGGGACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPIGCALRSSHLPGVKGVVEAS*PVPGPS Trigger: TGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCAC...TCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | TTAAAGCAGTTCAGAGTCAGCGCCTGCAGCCTGAGCGCCAGTTCCCTTCTCCACTGCAGGTGGGACGTCTaGGGGCACCGTGGGCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKQFRVSACSLSASSLLHCRWDV*GHRGRE Trigger: TTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCA...GTGGAGAAGGGAACTGGCGCTCAGGCTGCAGGCGCTGACTCTGAACTGCTTTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 90 bp | CCGGAGTGTGGTGGAGGCCTCCTTGCCTGTGCCGGGACCATCAGATaGAGCAGGAATCCTCTCTGGTCCACTATCCAGGGACTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PECGGGLLACAGTIR*SRNPLWSTIQGLEG Trigger: CCCTTCCAGTCCCTGGATAGTGGACCAGAGAGGATTCCTGCTTCATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | GGGGGCCTCCCATCGGCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGTCCGGAGGCAGTTCCTaGCCCTCTCCAGATCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGLPSAVLSGLLIFLELRSGGSS*PSPDPH Trigger: ATGGGGATCTGGAGAGGGCAAGGAACTGCCTCCGGA...CCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGCTCTCCGGTCTTCTCATCTTCCTGGAGTTAAGGGATGGCTCAGGTGGAGTACCCGCCCCCAGATaGCGTCCTAGAGGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLSGLLIFLELRDGSGGVPAPR*RPRGPG Trigger: TCCCGGCCCTCTAGGACGCAATCTGGGGGCGGGTAC...TCCACCTGAGCCATCCCTTAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 90 bp | ACTGGCTCAGAGCTGGCTCATACGGGTAGTAGGCTGCAGCTGCAGTaGGTGGTAGGCCGGCGTGTGAAGATCCTGTGCCATCCTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TGSELAHTGSRLQLQ*VVGRRVKILCHPWT Trigger: AGTCCAAGGATGGCACAGGATCTTCACACGCCGGCCTACCACCCACTGCAGCTGCAGCCTACTACCCGTATGAGCCAGCTCTGAGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 90 bp | GCAGGTGAGGACGCTGGCGTCGTCGCAGATACACCCGTTGGACCTTaGCGTTTCAGCATGCAGGAGGGAAACTCAGTCTGGCTCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGEDAGVVADTPVGP*RFSMQEGNSVWLRA Trigger: AGCTCTGAGCCAGACTGAGTTTCCCTCCTGCATGCTGAAACGCCAAGGTCCAACGGGTGTATCTGCGACGACGCCAGCGTCCTCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCTGCAGGTGGGACGTCTaGGGGCACCGTGGGCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NFGRKLYASGGLPSAVLSCRWDV*GHRGRE Trigger: TTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCA...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | AACTTTGGACGTAAACTTTATGCTTCAGGGGGCCTCCCATCGGCTGTGCTCTCCGTGGTGGAGGCCTCCTaGCCTGTGCCGGGACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NFGRKLYASGGLPSAVLSVVEAS*PVPGPS Trigger: TGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCAC...GGAGAGCACAGCCGATGGGAGGCCCCCTGAAGCATAAAGTTTACGTCCAAAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | TCAGAGAGTAGAAAGCAGATGCCTCAGAGCCATAGGTCACGTAGTTaGCATAGCCCTGCGAGCTGCCATAGGGGCTCCCGTAGACGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SESRKQMPQSHRSRS*HSPASCHRGSRRRR Trigger: TCGGCGTCTACGGGAGCCCCTATGGCAGCTCGCAGGGCTATGGCAACTACGTGACCTATGGCTCTGAGGCATCTGCTTTCTACTCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | AGGCTGCAGCTGCAGTGGGTGGTAGGCCGGCGTGTGAAGATCCTGTaGCATCCTTGGACTCGAAGCTGTTCAGAGAGTAGAAAGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLQLQWVVGRRVKIL*HPWTRSCSESRKQM Trigger: CATCTGCTTTCTACTCTCTGAACAGCTTCGAGTCCAAGGATGGCACAGGATCTTCACACGCCGGCCTACCACCCACTGCAGCTGCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 90 bp | CTGCAGTGGGTGGTAGGCCGGCGTGTGAAGATCCTGTGCCATCCTTaGACTCGAAGCTGTTCAGAGAGTAGAAAGCAGATGCCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQWVVGRRVKILCHP*TRSCSESRKQMPQS Trigger: GCTCTGAGGCATCTGCTTTCTACTCTCTGAACAGCTTCGAGTCCAAGGATGGCACAGGATCTTCACACGCCGGCCTACCACCCACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 90 bp | TCTTCCAAGTCACTGAGTTCTAGCTCCTTGTCGTCTTTGCCAGCATaGCCTTCGCTCTTGGCACTCTTGAGAGGCTCCTCCCGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKSLSSSSLSSLPA*PSLLALLRGSSRDS Trigger: GGAGTCACGGGAGGAGCCTCTCAAGAGTGCCAAGAGCGAAGGTCATGCTGGCAAAGACGACAAGGAGCTAGAACTCAGTGACTTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 90 bp | GTGGCCCAGGCCTGGTTCAAAGTGCTGTGTCTAAGGATGGGATCGTaGAATACCCCATCCACCCAGTTTCTGAGGCTAGTTACTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAQAWFKVLCLRMGS*NTPSTQFLRLVTGE Trigger: CTCCCCAGTAACTAGCCTCAGAAACTGGGTGGATGGGGTATTTCACGATCCCATCCTTAGACACAGCACTTTGAACCAGGCCTGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 90 bp | TGTGCCATCCTTGGACTCGAAGCTGTTCAGAGAGTAGAAAGCAGATaGCTCAGAGCCATAGGTCACGTAGTTGCCATAGCCCTGCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CAILGLEAVQRVESR*LRAIGHVVAIALRA Trigger: AGCTCGCAGGGCTATGGCAACTACGTGACCTATGGCTCTGAGGCATCTGCTTTCTACTCTCTGAACAGCTTCGAGTCCAAGGATGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 90 bp | CCATCAGATGAAGCAGGAATCCTCTCTGGTCCACTATCCAGGGACTaGAAGGGCGTCTTCAGCTCACATTCTGAGGTCTCTGCATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSDEAGILSGPLSRD*KGVFSSHSEVSASR Trigger: TCTAGATGCAGAGACCTCAGAATGTGAGCTGAAGACGCCCTTCCAGTCCCTGGATAGTGGACCAGAGAGGATTCCTGCTTCATCTGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 90 bp | ATTCTGAGGTCTCTGCATCTAGAGGGTCGAAGTCTTCCAAGTCACTaGGTTCTAGCTCCTTGTCGTCTTTGCCAGCATGACCTTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILRSLHLEGRSLPSH*VLAPCRLCQHDLRS Trigger: AGAGCGAAGGTCATGCTGGCAAAGACGACAAGGAGCTAGAACTCAGTGACTTGGAAGACTTCGACCCTCTAGATGCAGAGACCTCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS-3UTR CAA 90 bp | ATTAGCCTCCCTCTGAAACAGGCAATTACTGGTGTGAATATACATTTTAGAAAAGTACCCGCCCCCAGATaGCGTCCTAGAGGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISLPLKQAITGVNIHFRKVPAPR*RPRGPG Trigger: TCCCGGCCCTCTAGGACGCAATCTGGGGGCGGGTAC...TTTTCTAAAATGTATATTCACACCAGTAATTGCCTGTTTCAGAGGGAGGCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | GGCCTTGGGCGTAGCCAGCAGCTCCCGGGAGGCCCCTaGAGGTGGGACGTCTTGGGGCACCGTGGGCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GLGRSQQLPGGP*RWDVLGHRGRE Trigger: TTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCCCGGGAGCTGCTGGCTACGCCCAAGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GGGCGTAGCCAGCAGCTCCCGGGAGGCCCCTGCAGGTaGGACGTCTTGGGGCACCGTGGGCGGGAAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRSQQLPGGPCR*DVLGHRGREGA Trigger: TGCTCCTTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCCCGGGAGCTGCTGGCTACGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CAA 72 bp | CAGCAGCTCCCGGGAGGCCCCTGCAGGTGGGACGTCTaGGGGCACCGTGGGCGGGAAGGAGCAAGCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQLPGGPCRWDV*GHRGREGASKG Trigger: CCCCTTGCTTGCTCCTTCCCGCCCACGGTGCCCCAAGACGTCCCACCTGCAGGGGCCTCCCGGGAGCTGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GGTTCGGCGGCGCTCCCGCCTGAGCAAAGGTCAGTTTaGCTTCGCAAGCAGGTGGGCCGCCCTCGGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSAALPPEQRSV*LRKQVGRPRRQ Trigger: CTGGCGCCGAGGGCGGCCCACCTGCTTGCGAAGCCAAACTGACCTTTGCTCAGGCGGGAGCGCCGCCGAACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | CAGCTCCACCAGCGGTGCCCAGGGGCATCCGGAGTGTaGTGGAGGCCTCCTTGCCTGTGCCGGGACCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLHQRCPGASGV*WRPPCLCRDHQ Trigger: CTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGGATGCCCCTGGGCACCGCTGGTGGAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | GACGCCGAGCGCGGCGGCAGAATTGAGTTCGTGGCGTaGAGTGGCCAGCAGCCGGCTCTCGTAGACAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DAERGGRIEFVA*SGQQPALVDRA Trigger: TGCCCTGTCTACGAGAGCCGGCTGCTGGCCACTGCACGCCACGAACTCAATTCTGCCGCCGCGCTCGGCGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | GGCCGCCCTCGGCGCCAGAGTCAGGAACGACCACTGTaGTCCGGAGGCAGTTCCTTGCCCTCTCCAGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRPRRQSQERPL*SGGSSLPSPDP Trigger: GGGATCTGGAGAGGGCAAGGAACTGCCTCCGGAGCACAGTGGTCGTTCCTGACTCTGGCGCCGAGGGCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | CTCCACCAGCGGTGCCCAGGGGCATCCGGAGTGTGGTaGAGGCCTCCTTGCCTGTGCCGGGACCATCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LHQRCPGASGVW*RPPCLCRDHQM Trigger: CATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGGATGCCCCTGGGCACCGCTGGTGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | CGGTGGCTGTGTGTGCCAAGGACCAGATGCGGGGCTTaGTCTCCAGGTTCGGCGGCGCTCCCGCCTGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RWLCVPRTRCGA*SPGSAALPPEQ Trigger: TTGCTCAGGCGGGAGCGCCGCCGAACCTGGAGACCAAGCCCCGCATCTGGTCCTTGGCACACACAGCCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | AGCCATAGGTCACGTAGTTGCCATAGCCCTGCGAGCTaGCATAGGGGCTCCCGTAGACGCCGAGCGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SHRSRSCHSPAS*HRGSRRRRARR Trigger: CCGCCGCGCTCGGCGTCTACGGGAGCCCCTATGGCAGCTCGCAGGGCTATGGCAACTACGTGACCTATGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CAA 72 bp | AGGGGCGTCGTCAGTACGTTAGTACCCGCCCCCAGATaGCGTCCTAGAGGGCCGGGATCCAGAAGTGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGVVSTLVPAPR*RPRGPGSRSAP Trigger: GGGCGCACTTCTGGATCCCGGCCCTCTAGGACGCAATCTGGGGGCGGGTACTAACGTACTGACGACGCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | TGCCCAGGGGCATCCGGAGTGTGGTGGAGGCCTCCTTaGCTGTGCCGGGACCATCAGATGAAGCAGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: CPGASGVWWRPP*LCRDHQMKQES Trigger: GGATTCCTGCTTCATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGGATGCCCCTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CAA 72 bp | GTGCCCAGGGGCATCCGGAGTGTGGTGGAGGCCTCCTaGCCTGTGCCGGGACCATCAGATGAAGCAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: VPRGIRSVVEAS*PVPGPSDEAGI Trigger: GATTCCTGCTTCATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGGATGCCCCTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CAA 90 bp | GAGCAAGCAAGGGGCGTCGTCAGTACGTTAGTACCCGCCCCCAGATaGCGTCCTAGAGGGCCGGGATCCAGAAGTGCGCCCTTAGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EQARGVVSTLVPAPR*RPRGPGSRSAPLAV Trigger: CACCGCTAAGGGCGCACTTCTGGATCCCGGCCCTCTAGGACGCAATCTGGGGGCGGGTACTAACGTACTGACGACGCCCCTTGCTTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | AATCAGCCAGTGTGCGGCCGCCCGACTCGCAGCACGTaGTCAGGGAGTTGGTGGTCATCAGGAACTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NQPVCGRPTRST*SGSWWSSGTEE Trigger: CTCCTCAGTTCCTGATGACCACCAACTCCCTGAGCACGTGCTGCGAGTCGGGCGGCCGCACACTGGCTGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | GGGGCATCCGGAGTGTGGTGGAGGCCTCCTTGCCTGTaGCGGGACCATCAGATGAAGCAGGAATCCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GASGVWWRPPCL*RDHQMKQESSL Trigger: CAGAGAGGATTCCTGCTTCATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACCACACTCCGGATGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GGCCGCCCGACTCGCAGCACGTGCTCAGGGAGTTGGTaGTCATCAGGAACTGAGGAGCAGAGGAATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRPTRSTCSGSW*SSGTEEQRNRG Trigger: ACCCCTATTCCTCTGCTCCTCAGTTCCTGATGACCACCAACTCCCTGAGCACGTGCTGCGAGTCGGGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | TGCGGCCGCCCGACTCGCAGCACGTGCTCAGGGAGTTaGTGGTCATCAGGAACTGAGGAGCAGAGGAATAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGRPTRSTCSGS*WSSGTEEQRNR Trigger: CCTATTCCTCTGCTCCTCAGTTCCTGATGACCACCAACTCCCTGAGCACGTGCTGCGAGTCGGGCGGCCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 72 bp | CGTCTTTGCCAGCATGACCTTCGCTCTTGGCACTCTTaGGAGGCTCCTCCCGTGACTCCTCCTCTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLCQHDLRSWHS*EAPPVTPPLQP Trigger: AGGCTGGAGAGGAGGAGTCACGGGAGGAGCCTCTCAAGAGTGCCAAGAGCGAAGGTCATGCTGGCAAAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 72 bp | GGTGGAGGCCTCCTTGCCTGTGCCGGGACCATCAGATaGAGCAGGAATCCTCTCTGGTCCACTATCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGGLLACAGTIR*SRNPLWSTIQG Trigger: TCCCTGGATAGTGGACCAGAGAGGATTCCTGCTTCATCTGATGGTCCCGGCACAGGCAAGGAGGCCTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS GCA 72 bp | GTCAGGAACGACCACTGTGCTCCGGAGGCAGTTCCTTaGCCTCTCCAGATCCCCATCCATAACAGCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VRNDHCAPEAVP*PLQIPIHNSST Trigger: GGTGGAGCTGTTATGGATGGGGATCTGGAGAGGGCAAGGAACTGCCTCCGGAGCACAGTGGTCGTTCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS CCA 72 bp | GGTCCCGTACCTGTCATATGGGTACTGGCTCAGAGCTaGCTCATACGGGTAGTAGGCTGCAGCTGCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPVPVIWVLAQS*LIRVVGCSCSG Trigger: CCCACTGCAGCTGCAGCCTACTACCCGTATGAGCCAGCTCTGAGCCAGTACCCATATGACAGGTACGGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GACGCTGGCGTCGTCGCAGATACACCCGTTGGACCTTaGCGTTTCAGCATGCAGGAGGGAAACTCAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DAGVVADTPVGP*RFSMQEGNSVW Trigger: CCAGACTGAGTTTCCCTCCTGCATGCTGAAACGCCAAGGTCCAACGGGTGTATCTGCGACGACGCCAGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CAA 72 bp | GGACGCTGGCGTCGTCGCAGATACACCCGTTGGACCTaGGCGTTTCAGCATGCAGGAGGGAAACTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRWRRRRYTRWT*AFQHAGGKLSL Trigger: CAGACTGAGTTTCCCTCCTGCATGCTGAAACGCCAAGGTCCAACGGGTGTATCTGCGACGACGCCAGCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS CAA 72 bp | CAGGTGAGGACGCTGGCGTCGTCGCAGATACACCCGTaGGACCTTGGCGTTTCAGCATGCAGGAGGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: QVRTLASSQIHP*DLGVSACRRET Trigger: AGTTTCCCTCCTGCATGCTGAAACGCCAAGGTCCAACGGGTGTATCTGCGACGACGCCAGCGTCCTCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | AAATACCCCATCCACCCAGTTTCTGAGGCTAGTTACTaGGGAGTCCTGGTGCCTATCCAGAGCCCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KYPIHPVSEASY*GVLVPIQSPRR Trigger: CCTTCTGGGGCTCTGGATAGGCACCAGGACTCCCCAGTAACTAGCCTCAGAAACTGGGTGGATGGGGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
||
| CDS TCA 72 bp | TCACTGAGTTCTAGCTCCTTGTCGTCTTTGCCAGCATaGCCTTCGCTCTTGGCACTCTTGAGAGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSSSSLSSLPA*PSLLALLRGSS Trigger: GGAGGAGCCTCTCAAGAGTGCCAAGAGCGAAGGTCATGCTGGCAAAGACGACAAGGAGCTAGAACTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GTGGTAGGCCGGCGTGTGAAGATCCTGTGCCATCCTTaGACTCGAAGCTGTTCAGAGAGTAGAAAGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: VVGRRVKILCHP*TRSCSESRKQM Trigger: CATCTGCTTTCTACTCTCTGAACAGCTTCGAGTCCAAGGATGGCACAGGATCTTCACACGCCGGCCTACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS CCA 72 bp | GAAGCAGGAATCCTCTCTGGTCCACTATCCAGGGACTaGAAGGGCGTCTTCAGCTCACATTCTGAGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EAGILSGPLSRD*KGVFSSHSEVS Trigger: AGAGACCTCAGAATGTGAGCTGAAGACGCCCTTCCAGTCCCTGGATAGTGGACCAGAGAGGATTCCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS GCA 72 bp | CTTGGACTCGAAGCTGTTCAGAGAGTAGAAAGCAGATaGCTCAGAGCCATAGGTCACGTAGTTGCCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGLEAVQRVESR*LRAIGHVVAIA Trigger: GGCTATGGCAACTACGTGACCTATGGCTCTGAGGCATCTGCTTTCTACTCTCTGAACAGCTTCGAGTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 72 bp | TCTCTGCATCTAGAGGGTCGAAGTCTTCCAAGTCACTaGGTTCTAGCTCCTTGTCGTCTTTGCCAGCATGAC | + |
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Preference number: 6 (lower is better) Translates to: SLHLEGRSLPSH*VLAPCRLCQHD Trigger: GTCATGCTGGCAAAGACGACAAGGAGCTAGAACTCAGTGACTTGGAAGACTTCGACCCTCTAGATGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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| CDS TCA 72 bp | GCCTGGTTCAAAGTGCTGTGTCTAAGGATGGGATCGTaGAATACCCCATCCACCCAGTTTCTGAGGCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: AWFKVLCLRMGS*NTPSTQFLRLV Trigger: AACTAGCCTCAGAAACTGGGTGGATGGGGTATTTCACGATCCCATCCTTAGACACAGCACTTTGAACCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022095.10 ENSMUST00000176684.8 |
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