Pregenerated sensors for IRX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031734Ensembl transcript IDs: ENSMUST00000093312.6, ENSMUST00000175795.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGGGGGGAGGGCCAAGGTaGGGGGACTGGCTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPGGGPR*GDWLSF Trigger: GAAAGAAAGCCAGTCCCCCCACCTTGGCCCTCCCCC...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| 3UTR-3UTR GCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGATACACAGACATGCTTaGAACTCGTCACTATACAGA | + |
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Preference number: 2 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVIHRHA*NSSLYR Trigger: TCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTAT...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| 3UTR-3UTR CCA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTAAATGTGGGGTGACTTaGGGGAGGGCCAAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HTYVHFPVYTKRVRQACSKCGVT*GRAKVG Trigger: CCCCACCTTGGCCCTCCCCCAAGTCACCCCACATTT...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| 3UTR-3UTR TCA 90 bp | ACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCAATCTAAATGTGGGGTaGCTTGGGGGAGGGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TRMYIFPYIQKESDRLVLNLNVG*LGGGPR Trigger: CCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATT...GAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGGGTTGTCCGGGCTGGTaGCCGTCTCGGCCAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVGCPGW*PSRPVT Trigger: GGTCACTGGCCGAGACGGCCACCAGCCCGGACAACC...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGCCAGTGACCAGATCTTaGGCTTCTGGAGGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVPVTRS*ASGGRR Trigger: CCTCCGCCCTCCAGAAGCCCAAGATCTGGTCACTGG...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR TCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGGCGGCCGCAGCGGGATaGCCTGCGGCTCCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPAAAAG*PAAPGS Trigger: ACTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGC...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR TCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCGGCCGCAGCGGGATaGCCTGCGGCTCCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSAAAAG*PAAPGS Trigger: ACTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGC...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGTTTTGCAGTCCGAAATaGGTCCCAGGCCGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVFCSPK*VPGRSR Trigger: GCGACTTCGGCCTGGGACCCATTTCGGACTGCAAAA...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTCACGGGCGGTGGCGGTaGGGCCAGGCTCAGGACCGA | + |
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Preference number: 4 (lower is better) Translates to: GNHTQTCLQLVTIQSDFVHGRWR*GQAQDR Trigger: TCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTG...AACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGCACGGGCGGTGGCGGTaGGGCCAGGCTCAGGACCGA | + |
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Preference number: 4 (lower is better) Translates to: KVIIHRHACNSSLYRAILHGRWR*GQAQDR Trigger: TCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTG...CAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGGGGAGGCGAGCGGCGTaGGTTGTCCGGGCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPGRRAA*VVRAGG Trigger: GCCACCAGCCCGGACAACCCACGCCGCTCGCCTCCC...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGCTGGGAAAGGCCTGTTaGTCCAAGCGGGGAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVLGKAC*SKRGIC Trigger: GCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAG...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGTGCGCCTTGGCACCGGCTaGAAAGCTGTCTTGAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: NEGTSQSKCGVTWGRAKVRLGTG*KAVLSN Trigger: GTTACTCAAGACAGCTTTCCAGCCGGTGCCAAGGCG...CACCTTGGCCCTCCCCCAAGTCACCCCACATTTAGATTGTGAGGTTCCTTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTGGAACGCGGCGGCCGTaGCCGGATGCTGGACGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VIIHRHACNSSLYRAILFGTRRP*PDAGRQ Trigger: CTGGCGTCCAGCATCCGGCCACGGCCGCCGCGTTCC...AAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | TTTAAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTGGAACGCGGCGGCCGTaGCCGGATGCTGGACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKVIIHRHACNSSLYRAIGTRRP*PDAGRQ Trigger: CTGGCGTCCAGCATCCGGCCACGGCCGCCGCGTTCC...AATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTGGGAGGCGAGCGGCGTaGGTTGTCCGGGCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFGRRAA*VVRAGG Trigger: GCCACCAGCCCGGACAACCCACGCCGCTCGCCTCCC...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCAAGTCGCCGTTCCTGTaGGCCGCCCCAGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSKSPFL*AAPARV Trigger: GACCCTGGCTGGGGCGGCGCACAGGAACGGCGACTT...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTGAGTCTGTGTGCCGCTaGAGCCGCTGCAGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HVCTFSRIYKKSQTGLFSESVCR*SRCSGR Trigger: GCGGCCGCTGCAGCGGCTGCAGCGGCACACAGACTC...AGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTGAGTCTGTGTGCCGCTaGAGCCGCTGCAGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HTYVHFPVYTKRVRQACSESVCR*SRCSGR Trigger: GCGGCCGCTGCAGCGGCTGCAGCGGCACACAGACTC...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | GGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTGGAAGTCCCAGCAGGTaGTGTGGGGCCGAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GNHTQTCLQLVTIQSDFVGSPSR*CGAEPS Trigger: GCTGGGCTCGGCCCCACAGCACCTGCTGGGACTTCC...AACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | GGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTCGCAGCGGGATGACCTaGGGCTCCGGGAAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GNHTQTCLQLVTIQSDFVRSGMT*GSGKSQ Trigger: CTGGGACTTCCCGGAGCCGCAGGTCATCCCGCTGCG...AACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCGCAGCGGGATGACCTaGGGCTCCGGGAAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPRSGMT*GSGKSQ Trigger: CTGGGACTTCCCGGAGCCGCAGGTCATCCCGCTGCG...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGGCCGTGGCCGGATGCTaGACGCCAGGGCTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPAVAGC*TPGLSF Trigger: GAAGGACAGCCCTGGCGTCCAGCATCCGGCCACGGC...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | ATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTAAGTCGCCGTTCCTGTaGGCCGCCCCAGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IIHRHACNSSLYRAILFCKSPFL*AAPARV Trigger: GACCCTGGCTGGGGCGGCGCACAGGAACGGCGACTT...ACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTGGAAGTCCCAGCAGGTaGTGTGGGGCCGAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFGSPSR*CGAEPS Trigger: GCTGGGCTCGGCCCCACAGCACCTGCTGGGACTTCC...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTGGTTGTCCGGGCTGGTaGCCGTCTCGGCCAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFGCPGW*PSRPVT Trigger: GGTCACTGGCCGAGACGGCCACCAGCCCGGACAACC...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | TTTAAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTGTGGGTTGTCCGGGCTaGTGGCCGTCTCGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FKVIIHRHACNSSLYRAIVGCPG*WPSRPV Trigger: CACTGGCCGAGACGGCCACCAGCCCGGACAACCCAC...AATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | AAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTCCCAGCAGGTGCTGTaGGGCCGAGCCCAGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: KVIIHRHACNSSLYRAILSQQVL*GRAQHG Trigger: TCCATGCTGGGCTCGGCCCCACAGCACCTGCTGGGA...CAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | ATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTCGACACGAGTCTGTGTaGCGCTGCAGCCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IIHRHACNSSLYRAILFCRHESV*RCSRCS Trigger: GCTGCAGCGGCTGCAGCGGCACACAGACTCGTGTCG...ACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCTGAGCGCCCAGCTGTaGGAAGATGGGCAGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPLSAQL*EDGQLR Trigger: ACGGAGCTGCCCATCTTCCCACAGCTGGGCGCTCAG...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTCTGAGCGCCCAGCTGTaGGAAGATGGGCAGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: GNHTQTCLQLVTIQSDFVLSAQL*EDGQLR Trigger: ACGGAGCTGCCCATCTTCCCACAGCTGGGCGCTCAG...AACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCCGCAGGGATCCAGGCTaGAGGGTGGAGAAGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSRRDPG*RVEKVE Trigger: CTCCACCTTCTCCACCCTCCAGCCTGGATCCCTGCG...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCGCAGGGATCCAGGCTaGAGGGTGGAGAAGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPRRDPG*RVEKVE Trigger: CTCCACCTTCTCCACCCTCCAGCCTGGATCCCTGCG...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTCCCAGCAGGTGCTGTaGGGCCGAGCCCAGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: VIIHRHACNSSLYRAILFSQQVL*GRAQHG Trigger: TCCATGCTGGGCTCGGCCCCACAGCACCTGCTGGGA...AAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCCGCTCCCATAAGCATTaGCCTCCTCGTCCGTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSRSHKH*PPRPCD Trigger: GTCGCACGGACGAGGAGGGCAATGCTTATGGGAGCG...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTTGGAGAAGGTGGAGATaGAGGAGCCCTGGCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: HTYVHFPVYTKRVRQACSWRRWR*RSPGHG Trigger: CCCGTGGCCAGGGCTCCTGCATCTCCACCTTCTCCA...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR TCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCTCCTTCAGCTCATACTaGGCGCCCAGCTGTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSSFSSY*APSCGK Trigger: CTTCCCACAGCTGGGCGCTCAGTATGAGCTGAAGGA...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR GCA 90 bp | TCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTCGCTCCCATAAGCATTaGCCTCCTCGTCCGTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: SYTDMLATRHYTERFCFVRSHKH*PPRPCD Trigger: GTCGCACGGACGAGGAGGGCAATGCTTATGGGAGCG...AACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCATCCAGGCTGGAGGGTaGAGAAGGTGGAGATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSIQAGG*RRWRCR Trigger: CCTGCATCTCCACCTTCTCCACCCTCCAGCCTGGAT...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTCCAGTGACCAGATCTTaGGCTTCTGGAGGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFPVTRS*ASGGRR Trigger: CCTCCGCCCTCCAGAAGCCCAAGATCTGGTCACTGG...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTGTTCTGTGGCCGCCTTaGCACCGGCTGGAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HTYVHFPVYTKRVRQACSVLWPP*HRLESC Trigger: ACAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAAC...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | ACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCGTTCTGTGGCCGCCTTaGCACCGGCTGGAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TRMYIFPYIQKESDRLVLVLWPP*HRLESC Trigger: ACAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAAC...GAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR TCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTTCCTTCAGCTCATACTaGGCGCCCAGCTGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFSFSSY*APSCGK Trigger: CTTCCCACAGCTGGGCGCTCAGTATGAGCTGAAGGA...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTAGAGGGCGGATGTACTaGTATCCGAGCTGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVCTFSRIYKKSQTGLFSRGRMY*YPSWGK Trigger: CTTCCCCCAGCTCGGATACCAGTACATCCGCCCTCT...AGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTAGAGGGCGGATGTACTaGTATCCGAGCTGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTYVHFPVYTKRVRQACSRGRMY*YPSWGK Trigger: CTTCCCCCAGCTCGGATACCAGTACATCCGCCCTCT...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTATCCAGGCTGGAGGGTaGAGAAGGTGGAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFIQAGG*RRWRCR Trigger: CCTGCATCTCCACCTTCTCCACCCTCCAGCCTGGAT...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCTGGGAAAGGCCTGTTaGTCCAAGCGGGGAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPLGKAC*SKRGIC Trigger: GCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAG...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | ACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTTTTGCAGTCCGAAATaGGTCCCAGGCCGAAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRMYIFPYIQKESDRLVLFCSPK*VPGRSR Trigger: GCGACTTCGGCCTGGGACCCATTTCGGACTGCAAAA...GAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CCA 90 bp | GTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTCGCCTTGGCACCGGCTaGAAAGCTGTCTTGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIIHRHACNSSLYRAILFRLGTG*KAVLSN Trigger: GTTACTCAAGACAGCTTTCCAGCCGGTGCCAAGGCG...AAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR TCA 90 bp | CGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGCTGGAAAGCTGTCTTaGGTAACTTTTTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RMYIFPYIQKESDRLVLSAGKLS*VTFSPL Trigger: AAGTGGAGAAAAAGTTACTCAAGACAGCTTTCCAGC...GGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 90 bp | TGCAGCGGCCGCGGGCGAGAGCTGCAGCGTCGGGGGCGCAACGGCTaGGCCGGGAGGCGAACCTCCGGCTCCGGGAGGCGAGCGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSGRGRELQRRGRNG*AGRRTSGSGRRAAW Trigger: CCACGCCGCTCGCCTCCCGGAGCCGGAGGTTCGCCTCCCGGCGCAGCCGTTGCGCCCCCGACGCTGCAGCTCTCGCCCGCGGCCGCTGCA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 90 bp | GCCCAGCATGGACAGCGGGTGCGGCCGCGGACCGGCCGGCGGCCCTaGGAAAGGCCTGTTGGTCCAAGCGGGGAATTTGCCAAGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQHGQRVRPRTGRRP*ERPVGPSGEFAKRR Trigger: GCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGGTCCGCGGCCGCACCCGCTGTCCATGCTGGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 90 bp | GTCACCTGTTCCACTCTCCGGCTCGGCAGGCCGAGCATAGGCGGCTaGGGCCGCAGCGGGATGACCTGCGGCTCCGGGAAGTCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTCSTLRLGRPSIGG*GRSGMTCGSGKSQQ Trigger: CTGCTGGGACTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGCAGCCGCCTATGCTCGGCCTGCCGAGCCGGAGAGTGGAACAGGTGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093312.6 |
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| CDS GCA 90 bp | GCGATCTGTTCCACTCTCCGGCTCGGCAGGCCGAGCATAGGCGGCTaGGGCCGCAGCGGGATGACCTGCGGCTCCGGGAAGTCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AICSTLRLGRPSIGG*GRSGMTCGSGKSQQ Trigger: CTGCTGGGACTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGCAGCCGCCTATGCTCGGCCTGCCGAGCCGGAGAGTGGAACAGATCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175795.4 |
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| CDS GCA 90 bp | GTTTTGCAGTCCGAAATGGGTCCCAGGCCGAAGTCGCCGTTCCTGTaGGCCGCCCCAGCCAGGGTCAGCTCCGACCCGGCTGCCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQSEMGPRPKSPFL*AAPARVSSDPAAAL Trigger: CAGCGCGGCAGCCGGGTCGGAGCTGACCCTGGCTGGGGCGGCGCACAGGAACGGCGACTTCGGCCTGGGACCCATTTCGGACTGCAAAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 90 bp | CGGCCGGCGGCCCTGGGAAAGGCCTGTTGGTCCAAGCGGGGAATTTaGCAAGCGGCGCCGACACGAGTCTGTGTGCCGCTGCAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPAALGKACWSKRGI*QAAPTRVCVPLQPL Trigger: CAGCGGCTGCAGCGGCACACAGACTCGTGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 90 bp | CCTGGCCACGGGCGGTGGCGGTGGGGCCAGGCTCAGGACCGACAGTaGTCGGTCCTCCAAGCCTTCGGAGCTGTCGTCCGAGTCGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGHGRWRWGQAQDRQ*SVLQAFGAVVRVAS Trigger: ACTAGCGACTCGGACGACAGCTCCGAAGGCTTGGAGGACCGACCACTGTCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTGGCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 90 bp | GGAGGGTGGAGAAGGTGGAGATGCAGGAGCCCTGGCCACGGGCGGTaGCGGTGGGGCCAGGCTCAGGACCGACAGTGGTCGGTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGWRRWRCRSPGHGR*RWGQAQDRQWSVLQ Trigger: TTGGAGGACCGACCACTGTCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTGGCCAGGGCTCCTGCATCTCCACCTTCTCCACCCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 90 bp | CATAGGGGTAGAAGGCGGGGTGCGGGTGCGGGAACGCGGCGGCCGTaGCCGGATGCTGGACGCCAGGGCTGTCCTTCAGCTCATACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRGRRRGAGAGTRRP*PDAGRQGCPSAHTE Trigger: CTCAGTATGAGCTGAAGGACAGCCCTGGCGTCCAGCATCCGGCCACGGCCGCCGCGTTCCCGCACCCGCACCCCGCCTTCTACCCCTATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | AAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTCCCGGGTGGCGTTCTaGGGACGGGACGGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KVIIHRHACNSSLYRAILSRVAF*GRDGSP Trigger: CGGGGACCCGTCCCGTCCCAAGAACGCCACCCGGGA...CAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | ATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGTATCCCGGGTGGCGTTCTaGGGACGGGACGGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MYIFPYIQKESDRLVLSVSRVAF*GRDGSP Trigger: CGGGGACCCGTCCCGTCCCAAGAACGCCACCCGGGA...TACGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | CACACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTGGTTCTGTGGCCGCCTaGGCACCGGCTGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTYVHFPVYTKRVRQACSGSVAA*APAGKL Trigger: CAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAACC...AGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | ATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTGGTTCTGTGGCCGCCTaGGCACCGGCTGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IIHRHACNSSLYRAILFCGSVAA*APAGKL Trigger: CAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAACC...ACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTGCCAGTGACCAGATCTaGGGCTTCTGGAGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFASDQI*GFWRAE Trigger: CTCCGCCCTCCAGAAGCCCAAGATCTGGTCACTGGC...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | TCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTGCCAGTGACCAGATCTaGGGCTTCTGGAGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYTDMLATRHYTERFCFVASDQI*GFWRAE Trigger: CTCCGCCCTCCAGAAGCCCAAGATCTGGTCACTGGC...AACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | GTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGTCCGAGTCGCTAGTTTaGCAGTCCGAAATGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCTFSRIYKKSQTGLFSPSESLV*QSEMGP Trigger: GGGACCCATTTCGGACTGCAAAACTAGCGACTCGGA...CGGAGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | CATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTACTGATGAAAGCACATaGGATAGGGACCCAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HTQTCLQLVTIQSDFVLFTDEST*DRDPEA Trigger: CGCCTCTGGGTCCCTATCCAATGTGCTTTCATCAGT...AAACAAAACAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | CACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTACTGATGAAAGCACATaGGATAGGGACCCAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HVCTFSRIYKKSQTGLFSTDEST*DRDPEA Trigger: CGCCTCTGGGTCCCTATCCAATGTGCTTTCATCAGT...AGAGAACAAGCCTGTCTGACTCTTTTTGTATATACGGGAAAATGTACATACGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS-3UTR CAA 90 bp | AAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGACAGCGATATTTTTCTaGTCACCTGTTCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVIIHRHACNSSLYRAILTAIFF*SPVPLS Trigger: GGAGAGTGGAACAGGTGACAAGAAAAATATCGCTGT...CAAAATCGCTCTGTATAGTGACGAGTTGCAAGCATGTCTGTGTATGATTACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093312.6 |
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| CDS GCA 72 bp | CGCGGGCGAGAGCTGCAGCGTCGGGGGCGCAACGGCTaGGCCGGGAGGCGAACCTCCGGCTCCGGGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGRELQRRGRNG*AGRRTSGSGRR Trigger: TCGCCTCCCGGAGCCGGAGGTTCGCCTCCCGGCGCAGCCGTTGCGCCCCCGACGCTGCAGCTCTCGCCCGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 72 bp | CGGCGCCGACACGAGTCTGTGTGCCGCTGCAGCCGCTaGAGCGGCCGCGGGCGAGAGCTGCAGCGTCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRHESVCRCSR*SGRGRELQRRG Trigger: CCCCCGACGCTGCAGCTCTCGCCCGCGGCCGCTGCAGCGGCTGCAGCGGCACACAGACTCGTGTCGGCGCCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 72 bp | GGCGAACCTCCGGCTCCGGGAGGCGAGCGGCGTGGGTaGTCCGGGCTGGTGGCCGTCTCGGCCAGTGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEPPAPGGERRG*SGLVAVSASDQ Trigger: CTGGTCACTGGCCGAGACGGCCACCAGCCCGGACAACCCACGCCGCTCGCCTCCCGGAGCCGGAGGTTCGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 72 bp | CCGAGCATAGGCGGCTGCGGCCGCAGCGGGATGACCTaGGGCTCCGGGAAGTCCCAGCAGGTGCTGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSIGGCGRSGMT*GSGKSQQVLWG Trigger: GCCCCACAGCACCTGCTGGGACTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGCAGCCGCCTATGCTCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 72 bp | TCCACTCTCCGGCTCGGCAGGCCGAGCATAGGCGGCTaGGGCCGCAGCGGGATGACCTGCGGCTCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STLRLGRPSIGG*GRSGMTCGSGK Trigger: CTTCCCGGAGCCGCAGGTCATCCCGCTGCGGCCGCAGCCGCCTATGCTCGGCCTGCCGAGCCGGAGAGTGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 72 bp | AGAAGGCGGGGTGCGGGTGCGGGAACGCGGCGGCCGTaGCCGGATGCTGGACGCCAGGGCTGTCCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRGAGAGTRRP*PDAGRQGCPSA Trigger: AGCTGAAGGACAGCCCTGGCGTCCAGCATCCGGCCACGGCCGCCGCGTTCCCGCACCCGCACCCCGCCTTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 72 bp | GGACAGCGGGTGCGGCCGCGGACCGGCCGGCGGCCCTaGGAAAGGCCTGTTGGTCCAAGCGGGGAATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GQRVRPRTGRRP*ERPVGPSGEFA Trigger: GGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGGTCCGCGGCCGCACCCGCTGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 72 bp | GGCCGCGGACCGGCCGGCGGCCCTGGGAAAGGCCTGTaGGTCCAAGCGGGGAATTTGCCAAGCGGCGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGPAGGPGKGL*VQAGNLPSGAD Trigger: GTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGGTCCGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 90 bp | AGCGGGTGCGGCCGCGGACCGGCCGGCGGCCCTGGGAAAGGCCTGTaGGTCCAAGCGGGGAATTTGCCAAGCGGCGCCGACACGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGCGRGPAGGPGKGL*VQAGNLPSGADTSL Trigger: CAGACTCGTGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGGTCCGCGGCCGCACCCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 72 bp | TGGAGATGCAGGAGCCCTGGCCACGGGCGGTGGCGGTaGGGCCAGGCTCAGGACCGACAGTGGTCGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WRCRSPGHGRWR*GQAQDRQWSVL Trigger: GAGGACCGACCACTGTCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTGGCCAGGGCTCCTGCATCTCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 72 bp | GCCGCGGACCGGCCGGCGGCCCTGGGAAAGGCCTGTTaGTCCAAGCGGGGAATTTGCCAAGCGGCGCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: AADRPAALGKAC*SKRGICQAAPT Trigger: TGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGGTCCGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS GCA 72 bp | TCCGAAATGGGTCCCAGGCCGAAGTCGCCGTTCCTGTaGGCCGCCCCAGCCAGGGTCAGCTCCGACCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SEMGPRPKSPFL*AAPARVSSDPA Trigger: AGCCGGGTCGGAGCTGACCCTGGCTGGGGCGGCGCACAGGAACGGCGACTTCGGCCTGGGACCCATTTCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
||
| CDS CCA 72 bp | GGGCGGTGGCGGTGGGGCCAGGCTCAGGACCGACAGTaGTCGGTCCTCCAAGCCTTCGGAGCTGTCGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GRWRWGQAQDRQ*SVLQAFGAVVR Trigger: TCGGACGACAGCTCCGAAGGCTTGGAGGACCGACCACTGTCGGTCCTGAGCCTGGCCCCACCGCCACCGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
||
| CDS CCA 72 bp | AGAAGGTGGAGATGCAGGAGCCCTGGCCACGGGCGGTaGCGGTGGGGCCAGGCTCAGGACCGACAGTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RRWRCRSPGHGR*RWGQAQDRQWS Trigger: CGACCACTGTCGGTCCTGAGCCTGGCCCCACCGCCACCGCCCGTGGCCAGGGCTCCTGCATCTCCACCTTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 90 bp | CCGGCCGGCGGCCCTGGGAAAGGCCTGTTGGTCCAAGCGGGGAATTaGCCAAGCGGCGCCGACACGAGTCTGTGTGCCGCTGCAGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGGPGKGLLVQAGN*PSGADTSLCAAAAA Trigger: AGCGGCTGCAGCGGCACACAGACTCGTGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCCGCCGGCCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
||
| CDS GCA 72 bp | CTTCGTCCTCCTCCTCCCGCTCGCTCCCATAAGCATTaGCCTCCTCGTCCGTGCGACTACGGGGAGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LRPPPPARSHKH*PPRPCDYGEPT Trigger: CGTGGGCTCCCCGTAGTCGCACGGACGAGGAGGGCAATGCTTATGGGAGCGAGCGGGAGGAGGAGGACGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
||
| CDS GCA 72 bp | GCCCTGGGAAAGGCCTGTTGGTCCAAGCGGGGAATTTaGCAAGCGGCGCCGACACGAGTCTGTGTGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALGKACWSKRGI*QAAPTRVCVPL Trigger: CAGCGGCACACAGACTCGTGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 72 bp | GGCCCTGGGAAAGGCCTGTTGGTCCAAGCGGGGAATTaGCCAAGCGGCGCCGACACGAGTCTGTGTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GPGKGLLVQAGN*PSGADTSLCAA Trigger: AGCGGCACACAGACTCGTGTCGGCGCCGCTTGGCAAATTCCCCGCTTGGACCAACAGGCCTTTCCCAGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 90 bp | GGTCGGTCCTCCAAGCCTTCGGAGCTGTCGTCCGAGTCGCTAGTTTaGCAGTCCGAAATGGGTCCCAGGCCGAAGTCGCCGTTCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRSSKPSELSSESLV*QSEMGPRPKSPFLC Trigger: GCACAGGAACGGCGACTTCGGCCTGGGACCCATTTCGGACTGCAAAACTAGCGACTCGGACGACAGCTCCGAAGGCTTGGAGGACCGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 72 bp | TCCAAGCCTTCGGAGCTGTCGTCCGAGTCGCTAGTTTaGCAGTCCGAAATGGGTCCCAGGCCGAAGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: SKPSELSSESLV*QSEMGPRPKSP Trigger: CGGCGACTTCGGCCTGGGACCCATTTCGGACTGCAAAACTAGCGACTCGGACGACAGCTCCGAAGGCTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CCA 72 bp | GAGGAGAGAGCTGATAAGACCAGAGCAGCGTCCAGATaGTTCTGTGGCCGCCTTGGCACCGGCTGGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: EERADKTRAASR*FCGRLGTGWKA Trigger: AGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAACCATCTGGACGCTGCTCTGGTCTTATCAGCTCTCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 72 bp | TTCTGTGGCCGCCTTGGCACCGGCTGGAAAGCTGTCTaGAGTAACTTTTTCTCCACTTCCAAGGCACTACAG | + |
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Preference number: 6 (lower is better) Translates to: FCGRLGTGWKAV*SNFFSTSKALQ Trigger: CTGTAGTGCCTTGGAAGTGGAGAAAAAGTTACTCAAGACAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093312.6 ENSMUST00000175795.4 |
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| CDS CAA 90 bp | TCCAGATGGTTCTGTGGCCGCCTTGGCACCGGCTGGAAAGCTGTCTaGAGTAACTTTTTCTCCACTTCCAAGGCACTACAGCGATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SRWFCGRLGTGWKAV*SNFFSTSKALQRSV Trigger: AACAGATCGCTGTAGTGCCTTGGAAGTGGAGAAAAAGTTACTCAAGACAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAACCATCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175795.4 |
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| CDS CAA 90 bp | TCCAGATGGTTCTGTGGCCGCCTTGGCACCGGCTGGAAAGCTGTCTaGAGTAACTTTTTCTCCACTTCCAAGGCACTACAGCGATATTTT | + |
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Preference number: 6 (lower is better) Translates to: SRWFCGRLGTGWKAV*SNFFSTSKALQRYF Trigger: AAAATATCGCTGTAGTGCCTTGGAAGTGGAGAAAAAGTTACTCAAGACAGCTTTCCAGCCGGTGCCAAGGCGGCCACAGAACCATCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093312.6 |
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