Pregenerated sensors for IRS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047182Ensembl transcript IDs: ENSMUST00000057314.4, ENSMUST00000196511.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCAAGGGGGCAGCAGAGCAGCTCATGGTGGCCTCAGGGTTCCTaGGTCCTGTGTGCAGGAGCTGAGCTGAACAGTACTAAGGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QARGQQSSSWWPQGS*VLCAGAELNSTKVS Trigger: AGAGACCTTAGTACTGTTCAGCTCAGCTCCTGCACACAGGACCCAGGAACCCTGAGGCCACCATGAGCTGCTCTGCTGCCCCCTTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR GCA 90 bp | CCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTaGTTGAGGAGCACCGTCATGATCCCTGATGCTCCTCCCATTGTT | + |
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Preference number: 1 (lower is better) Translates to: PEKGQVRTGCLGSTG*LRSTVMIPDAPPIV Trigger: AACAATGGGAGGAGCATCAGGGATCATGACGGTGCTCCTCAAGCAGCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR CCA 90 bp | AACTCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTaGCTGCTTGGGGAGCACTGGCTGCTTGAGGAGCACCGTCATGAT | + |
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Preference number: 1 (lower is better) Translates to: NSFVSAGPRERSGED*LLGEHWLLEEHRHD Trigger: ATCATGACGGTGCTCCTCAAGCAGCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR TCA 90 bp | CATGGTGGCCTCAGGGTTCCTGGGTCCTGTGTGCAGGAGCTGAGCTaGACAGTACTAAGGTCTCTTCTTTTCCTCTCTTCCCTGACCAAT | + |
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Preference number: 1 (lower is better) Translates to: HGGLRVPGSCVQELS*TVLRSLLFLSSLTN Trigger: ATTGGTCAGGGAAGAGAGGAAAAGAAGAGACCTTAGTACTGTTCAGCTCAGCTCCTGCACACAGGACCCAGGAACCCTGAGGCCACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACAGCTAGCTGCTTGGATTGCGAGTaGGGGGAGGGCTGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ELSQTRMRVFIQAWATASCLDCE*GEGWQG Trigger: GCCCTGCCAGCCCTCCCCCCACTCGCAATCCAAGCA...GCTAGCTGTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACTGGCCTCAGGGTTCCTaGGTCCTGTGTGCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GDRAVPNQDESLHPGLGHWPQGS*VLCAGA Trigger: AGCTCCTGCACACAGGACCCAGGAACCCTGAGGCCA...GTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGGTTCCTCGAGCATGGCTTCCTGAGGGCTTCCTAGGTGGTACAGCTGGACAGCAGAGCAGCTCATaGTGGCCTCAGGGTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLVPRAWLPEGFLGGTAGQQSSS*WPQGSW Trigger: CCAGGAACCCTGAGGCCACCATGAGCTGCTCTGCTG...TCCAGCTGTACCACCTAGGAAGCCCTCAGGAAGCCATGCTCGAGGAACCAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR CAA 90 bp | GAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTGCTaGAGGAGCACCGTCATGATCCCTGATGCTCCTCCCATTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EKGQVRTGCLGSTGC*RSTVMIPDAPPIVS Trigger: AGAAACAATGGGAGGAGCATCAGGGATCATGACGGTGCTCCTCAAGCAGCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTGTTTTATTTGTTTGTTaGTTGGATTGCGAGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TCEGTELSQTRMRVFIQAVLFVC*LDCEWG Trigger: CCCCCACTCGCAATCCAAGCAACAAACAAATAAAAC...AGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTCACATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR GCA 72 bp | CTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTaGTTGGGGAGCACTGGCTGCTTGAGGAGCACCGTC | + |
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Preference number: 3 (lower is better) Translates to: LLGPEKGQVRTG*LGSTGCLRSTV Trigger: GACGGTGCTCCTCAAGCAGCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR GCA 72 bp | GGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTaGTTGAGGAGCACCGTCATGATCCCTGATGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GQVRTGCLGSTG*LRSTVMIPDAP Trigger: AGGAGCATCAGGGATCATGACGGTGCTCCTCAAGCAGCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR CCA 72 bp | GGGCAGCAGAGCAGCTCATGGTGGCCTCAGGGTTCCTaGGTCCTGTGTGCAGGAGCTGAGCTGAACAGTACT | + |
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Preference number: 3 (lower is better) Translates to: GQQSSSWWPQGS*VLCAGAELNST Trigger: AGTACTGTTCAGCTCAGCTCCTGCACACAGGACCCAGGAACCCTGAGGCCACCATGAGCTGCTCTGCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR TCA 72 bp | CAACATGTGAGGGGACAGAGCTGTCCCAAACCAGGATaGGAGTCTTCATCCAGGCTTGGGCCACAGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: QHVRGQSCPKPG*ESSSRLGPQLA Trigger: GGCTAGCTGTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTCACATGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR CCA 72 bp | CTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTaGGCCACAGCTAGCCTGAGACTGATTCTGTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LSQTRMRVFIQA*ATASLRLILWA Trigger: TGCCCACAGAATCAGTCTCAGGCTAGCTGTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR TCA 72 bp | TTCTCTGAAGAGTCTGGTTCCTCGAGCATGGCTTCCTaGGGGCTTCCTAGGTGGTACAGCTGGAAGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: FSEESGSSSMAS*GLPRWYSWKEQ Trigger: CTGTTCCTTCCAGCTGTACCACCTAGGAAGCCCTCAGGAAGCCATGCTCGAGGAACCAGACTCTTCAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| 3UTR TCA 72 bp | ACCTTTAATGGGTGGGTTGGGCTGCACTCTGGGAAGTaGGGAACTCGTTTGTGTCTGCTGGGCCCAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: TFNGWVGLHSGK*GTRLCLLGPEK Trigger: TTTCTCTGGGCCCAGCAGACACAAACGAGTTCCTCACTTCCCAGAGTGCAGCCCAACCCACCCATTAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| 3UTR TCA 72 bp | ACAGCTAGCCTGAGACTGATTCTGTGGGCATTCATCTaGGAAGGGTTTTATTTGTTTGTTGCTTGGATTGCG | + |
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Preference number: 3 (lower is better) Translates to: TASLRLILWAFI*EGFYLFVAWIA Trigger: CGCAATCCAAGCAACAAACAAATAAAACCCTTCTCAGATGAATGCCCACAGAATCAGTCTCAGGCTAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | AGCAGGCAAGGGGGCAGCAGAGCAGCTCATGGTGGCCTCAGGGTTCCTGGGTCCCTCTCCCCAGCCCCTTaGACCGCAGTGTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRQGGSRAAHGGLRVPGSLSPAP*TAVSQA Trigger: GGCCTGTGACACTGCGGTCCAAGGGGCTGGGGAGAG...GGACCCAGGAACCCTGAGGCCACCATGAGCTGCTCTGCTGCCCCCTTGCCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | CGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGTAGCAGCAGCGGCTaGGGCGGTGGCGCGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RLCLLGPEKGQVRTGCLGSSSSG*GGGAHL Trigger: GAGGTGCGCGCCACCGCCGCAGCCGCTGCTGCTACT...CCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCAGTAGCAGCAGCGGCTaGGGCGGTGGCGCGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LCLLGPEKGQVRTGCLGSSSSSG*GGGAHL Trigger: GAGGTGCGCGCCACCGCCGCAGCCGCTGCTGCTACT...GCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | TCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGCTGCTCTGCTTCGCTaGCCGCCGCCACGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SFVSAGPRERSGEDWLLGAALLR*PPPRPG Trigger: GCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGC...CCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTCTCCCCAGCCCCTTaGACCGCAGTGTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAGPRERSGEDWLLGEHWLSPAP*TAVSQA Trigger: GGCCTGTGACACTGCGGTCCAAGGGGCTGGGGAGAG...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | GTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACGGACAAGCGCAGGACTaGTGGTGGCGTTGCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: VSAGPRERSGEDWLLGEHGQAQD*WWRCPA Trigger: AGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCC...GTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCGCGGTGGCTCAGCTTTaGCAGCTGCATTGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLGPEKGQVRTGCLGSTGAVAQL*QLHCSP Trigger: TGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGC...GCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR TCA 90 bp | GTGAGGAACTCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGACGATCAGGTGGCGCTaGCGGGCATCCGCGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VRNSFVSAGPRERSGEDWTIRWR*RASARL Trigger: CAAGCGCGCGGATGCCCGTCAGCGCCACCTGATCGT...CCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGAGTTCCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGAGAAGGGCACCTTTAATGGGTGGGTTGGGCTGCACTCTGGGAAGTGAGACGATCAGGTGGCGCTaGCGGGCATCCGCGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SGRRAPLMGGLGCTLGSETIRWR*RASARL Trigger: CAAGCGCGCGGATGCCCGTCAGCGCCACCTGATCGT...CTCACTTCCCAGAGTGCAGCCCAACCCACCCATTAAAGGTGCCCTTCTCCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCCAGGGCGCTGTACCATaGTTGCTGCTCTGCTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LLGPEKGQVRTGCLGSTGQGAVP*LLLCFA Trigger: AGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTG...GCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | CGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGGCTGCTCAGGCCTTGTaGTCTCCCCAGCCCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RLCLLGPEKGQVRTGCLGAAQAL*SPQPLG Trigger: TCCAAGGGGCTGGGGAGAGCACAAGGCCTGAGCAGC...CCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | CGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGGGCGATAGCTGCCGCTaGTCAGGCCTTGTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLCLLGPEKGQVRTGCLGGDSCR*SGLVLS Trigger: GGAGAGCACAAGGCCTGAGCAGCGGCAGCTATCGCC...CCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGGCGGTGGCTCAGCTTTaGCAGCTGCATTGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SAGPRERSGEDWLLGEHWAVAQL*QLHCSP Trigger: TGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGC...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCAATGGGCACCCGGATaGCCAAGTTCAGACTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SAGPRERSGEDWLLGEHWQWAPG*PSSDSL Trigger: CAGGGAGTCTGAACTTGGGCATCCGGGTGCCCATTG...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGAAGGGCACCTTTAATGGGTGGGTTGGGCTGCACTCTGGGAAGTGAGGGACAAGCGCAGGACTaGTGGTGGCGTTGCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGRRAPLMGGLGCTLGSEGQAQD*WWRCPA Trigger: AGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCC...CTCACTTCCCAGAGTGCAGCCCAACCCACCCATTAAAGGTGCCCTTCTCCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196511.2 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGTGTCGCTGGTATAGATaGCGATCAGGTGGCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SAGPRERSGEDWLLGEHWCRWYR*RSGGAD Trigger: GTCAGCGCCACCTGATCGTCATCTATACCAGCGACA...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | GTGAGGAACTCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGACTCTTCCCTGGGGCTaGTCCAGGAACCTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VRNSFVSAGPRERSGEDWTLPWG*SRNLQG Trigger: CCCCTGGAGGTTCCTGGAGCAGCCCCAGGGAAGAGT...CCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGAGTTCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | GTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACAAAAAGCGGCGGCGCTaGGACTTCTGCTTCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSAGPRERSGEDWLLGEHKKRRR*DFCFLR Trigger: TCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTT...GTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | CGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGATTTCCCTGTGGCGGTaGCTCAGCTTTGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLCLLGPEKGQVRTGCLGISLWR*LSFASC Trigger: GCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAAT...CCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | CGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGTGGAGGATTTCCCTGTaGCGGTGGCTCAGCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RLCLLGPEKGQVRTGCLGWRISL*RWLSFA Trigger: GGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCA...CCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTGCAGGAACACTCTTTaGAGGATTTCCCTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPEKGQVRTGCLGSTGCRNTL*RISLWR Trigger: CCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCA...GCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCGGTGGGAGGAAGGCCTaGGGGCGCCATCCACATATA | + |
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Preference number: 4 (lower is better) Translates to: EGTELSQTRMRVFIQAWAGGRKA*GRHPHI Trigger: TATATGTGGATGGCGCCCCCAGGCCTTCCTCCCACC...GGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | TCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGACTGCATCAGGAGCCTaGAGCCAGAGCTCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SFVSAGPRERSGEDWLLGTASGA*SQSSPG Trigger: TCCTGGTGAGCTCTGGCTGCAGGCTCCTGATGCAGT...CCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | GGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACCTCAGCTTTGCCAGCTaGATTGCTCCCCAGCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: GDRAVPNQDESLHPGLGHLSFAS*IAPQPL Trigger: AAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAG...GTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | TCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGCTCAGCTTTGCCAGCTaGATTGCTCCCCAGCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFVSAGPRERSGEDWLLGLSFAS*IAPQPL Trigger: AAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAG...CCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | TCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGTTCTGCTTCCTCAGATaGCCACAGAGCCGCACGTCG | + |
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Preference number: 4 (lower is better) Translates to: SFVSAGPRERSGEDWLLGFCFLR*PQSRTS Trigger: CGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAA...CCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGTGCAGGAACACTCTTTaGAGGATTTCCCTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SAGPRERSGEDWLLGEHWCRNTL*RISLWR Trigger: CCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCA...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR TCA 90 bp | GAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCCTTGTAGGAGTGTGTTaGCCCCATCCTTTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: EGTELSQTRMRVFIQAWALVGVC*PHPFQG Trigger: CCCCTGGAAAGGATGGGGTCAACACACTCCTACAAG...GGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | ACATGTGAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTGGCGATAGCTGCCGCTaGTCAGGCCTTGTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TCEGTELSQTRMRVFIQAGDSCR*SGLVLS Trigger: GGAGAGCACAAGGCCTGAGCAGCGGCAGCTATCGCC...AGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTCACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | AGTCTGGTTCCTCGAGCATGGCTTCCTGAGGGCTTCCTAGGTGGTACAGCTGGAACTGCATCAGGAGCCTaGAGCCAGAGCTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVPRAWLPEGFLGGTAGTASGA*SQSSPG Trigger: TCCTGGTGAGCTCTGGCTGCAGGCTCCTGATGCAGT...TCCAGCTGTACCACCTAGGAAGCCCTCAGGAAGCCATGCTCGAGGAACCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACAGCTAGCTTCTGCTTCCTCAGATaGCCACAGAGCCGCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELSQTRMRVFIQAWATASFCFLR*PQSRTS Trigger: CGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAA...GCTAGCTGTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGGGTTCCTGGGTCCTGTGTGCAGGAGCTGAGCTGAACAGTACTAAGGTCATTTCCCTGTGGCGGTaGCTCAGCTTTGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGSWVLCAGAELNSTKVISLWR*LSFASC Trigger: GCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAAT...GACCTTAGTACTGTTCAGCTCAGCTCCTGCACACAGGACCCAGGAACCCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACAGCTAGCTGTCGCTGGTATAGATaGCGATCAGGTGGCGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSQTRMRVFIQAWATASCRWYR*RSGGAD Trigger: GTCAGCGCCACCTGATCGTCATCTATACCAGCGACA...GCTAGCTGTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR TCA 90 bp | GTGAGGAACTCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTTGTAGGAGTGTGTTaGCCCCATCCTTTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRNSFVSAGPRERSGEDWLVGVC*PHPFQG Trigger: CCCCTGGAAAGGATGGGGTCAACACACTCCTACAAG...CCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGAGTTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCGGACTGTCTCATGAATaGTTTGGGCCACCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLGPEKGQVRTGCLGSGLSHE*FGPPLH Trigger: ATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCC...GCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGGTTCCTCGAGCATGGCTTCCTGAGGGCTTCCTAGGTGGTACAGCTGGAAAAAAGCGGCGGCGCTaGGACTTCTGCTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVPRAWLPEGFLGGTAGKKRRR*DFCFLR Trigger: TCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTT...TCCAGCTGTACCACCTAGGAAGCCCTCAGGAAGCCATGCTCGAGGAACCAGACT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | GCTGGCAGGGCAGAGAGAAGTTCTAGTGTTTTCTCTGAAGAGTCTGGTTCCTCGTGGAGGATTTCCCTGTaGCGGTGGCTCAGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRAERSSSVFSEESGSSWRISL*RWLSFA Trigger: GGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCA...CGAGGAACCAGACTCTTCAGAGAAAACACTAGAACTTCTCTCTGCCCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | GCAGGAGCTGAGCTGAACAGTACTAAGGTCTCTTCTTTTCCTCTCTTCCCTGACCAGGGCGCTGTACCATaGTTGCTGCTCTGCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGAELNSTKVSSFPLFPDQGAVP*LLLCFA Trigger: AGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTG...GTCAGGGAAGAGAGGAAAAGAAGAGACCTTAGTACTGTTCAGCTCAGCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | GCAGGAGCTGAGCTGAACAGTACTAAGGTCTCTTCTTTTCCTCTCTTCCCTGACATGTGGACTCTTCCCTaGGGCTGCTCCAGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGAELNSTKVSSFPLFPDMWTLP*GCSRNL Trigger: GAGGTTCCTGGAGCAGCCCCAGGGAAGAGTCCACAT...GTCAGGGAAGAGAGGAAAAGAAGAGACCTTAGTACTGTTCAGCTCAGCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR TCA 90 bp | GCTGGCAGGGCAGAGAGAAGTTCTAGTGTTTTCTCTGAAGAGTCTGGTTCCTCGTCCTTTCCAGGGGCTTaGAGTAGTCCTGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGRAERSSSVFSEESGSSSFPGA*SSPALL Trigger: GAGCAAAGCAGGACTACTTCAAGCCCCTGGAAAGGA...CGAGGAACCAGACTCTTCAGAGAAAACACTAGAACTTCTCTCTGCCCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR GCA 90 bp | ACATGTGAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTGGACTGTCTCATGAATaGTTTGGGCCACCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCEGTELSQTRMRVFIQAGLSHE*FGPPLH Trigger: ATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCC...AGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTCACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CCA 90 bp | GAGGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCGTAAAAATCTATTCATaGGCACATACTCTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGTELSQTRMRVFIQAWAVKIYS*AHTLCS Trigger: AGAGCACAGAGTATGTGCCCATGAATAGATTTTTAC...GGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 90 bp | GCTGCGGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATGCTTaGTGCTCTGCTTCGCTGGCCGCCGCCACGCCCAGGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AAAVARTSSRALYHA*CSASLAAATPRLLS Trigger: CGACAGCAGCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACCGCCGCAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | AGCGGCTGCGGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATaGTTGCTGCTCTGCTTCGCTGGCCGCCGCCACGCCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGCGGGAHLEQGAVP*LLLCFAGRRHAQAA Trigger: AGCAGCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACCGCCGCAGCCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 90 bp | ATGGCCACAGAGCCGCACGTCGGGCAGGCAGGGCCAAGGAAACGGTaGGCCGAGGGACACGTCGGTGCACTCGCCCCCGGAGGAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: MATEPHVGQAGPRKR*AEGHVGALAPGGDC Trigger: ACAGTCTCCTCCGGGGGCGAGTGCACCGACGTGTCCCTCGGCTCACCGTTTCCTTGGCCCTGCCTGCCCGACGTGCGGCTCTGTGGCCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | TCCAGGCGTGGTGGGTCAGCGCGCAGCACGAAAAAGCGGCGGCGCTaGGACTTCTGCTTCCTCAGATGGCCACAGAGCCGCACGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRGGSARSTKKRRR*DFCFLRWPQSRTSG Trigger: GCCCGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACCACGCCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | AGGGGCCTCTTGGGGACTGAAACCCATAGCAGTAGCAGCAGCGGCTaGGGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLLGTETHSSSSSG*GGGAHLEQGAVPCL Trigger: CAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACCGCCGCAGCCGCTGCTGCTACTGCTATGGGTTTCAGTCCCCAAGAGGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | CGCAGCACGAAAAAGCGGCGGCGCTGGGACTTCTGCTTCCTCAGATaGCCACAGAGCCGCACGTCGGGCAGGCAGGGCCAAGGAAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSTKKRRRWDFCFLR*PQSRTSGRQGQGNG Trigger: ACCGTTTCCTTGGCCCTGCCTGCCCGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGGCCGCTGCTCAGGCCTaGTGCTCTCCCCAGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAGPRERSGEDWLLGEHWAAAQA*CSPQPL Trigger: AAGGGGCTGGGGAGAGCACAAGGCCTGAGCAGCGGC...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | GCCGCTGGCCAAGAACTTCTTCTCGCTCTCGTAGCACTCCAGGCGTaGTGGGTCAGCGCGCAGCACGAAAAAGCGGCGGCGCTGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: AAGQELLLALVALQA*WVSAQHEKAAALGL Trigger: AAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACCACGCCTGGAGTGCTACGAGAGCGAGAAGAAGTTCTTGGCCAGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | GCAAGGACAAGCGCAGGACTGGTGGTGGCGTTGCCCGGCTGTCTCTaGAACCTTTGCTTCCAGGCTTTCGCAGGAGGCTCAGGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARTSAGLVVALPGCL*NLCFQAFAGGSGPQ Trigger: CTGGGGCCCTGAGCCTCCTGCGAAAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | TGCGTGGCCACAGCGGCGCACACTGAGCAAGGACAAGCGCAGGACTaGTGGTGGCGTTGCCCGGCTGTCTCTGGAACCTTTGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVATAAHTEQGQAQD*WWRCPAVSGTFASR Trigger: CCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGCCGCTGTGGCCACGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | GCGGCGCACACTGAGCAAGGACAAGCGCAGGACTGGTGGTGGCGTTaGCCGGCTGTCTCTGGAACCTTTGCTTCCAGGCTTTCGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAHTEQGQAQDWWWR*PAVSGTFASRLSQE Trigger: CTCCTGCGAAAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | GCTGGCCAAGAACTTCTTCTCGCTCTCGTAGCACTCCAGGCGTGGTaGGTCAGCGCGCAGCACGAAAAAGCGGCGGCGCTGGGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGQELLLALVALQAW*VSAQHEKAAALGLL Trigger: CAGAAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACCACGCCTGGAGTGCTACGAGAGCGAGAAGAAGTTCTTGGCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | GTGGCCACAGCGGCGCACACTGAGCAAGGACAAGCGCAGGACTGGTaGTGGCGTTGCCCGGCTGTCTCTGGAACCTTTGCTTCCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VATAAHTEQGQAQDW*WRCPAVSGTFASRL Trigger: AAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGCCGCTGTGGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | CAGACGTCCTGGAATGGGGCGAAGATCCAAGACTCAGGGGCCTCTTaGGGACTGAAACCCATAGCAGTAGCAGCAGCGGCTGCGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSWNGAKIQDSGAS*GLKPIAVAAAAAAV Trigger: CACCGCCGCAGCCGCTGCTGCTACTGCTATGGGTTTCAGTCCCCAAGAGGCCCCTGAGTCTTGGATCTTCGCCCCATTCCAGGACGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCAGACTCAGGGGCCTCTaGGGGACTGAAACCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGPEKGQVRTGCLGSTGRLRGL*GTETHS Trigger: GCTATGGGTTTCAGTCCCCAAGAGGCCCCTGAGTCT...GCCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | AGTCTGGTTCCTCGAGCATGGCTTCCTGAGGGCTTCCTAGGTGGTACAGCTGGAGCTCTCCCCAGCCCCTaGGACCGCAGTGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLVPRAWLPEGFLGGTAGALPSP*DRSVTG Trigger: GCCTGTGACACTGCGGTCCAAGGGGCTGGGGAGAGC...TCCAGCTGTACCACCTAGGAAGCCCTCAGGAAGCCATGCTCGAGGAACCAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS-3UTR CAA 90 bp | TCAGGGAGAAGGGCACCTTTAATGGGTGGGTTGGGCTGCACTCTGGGAAGTGAGGCTCTCCCCAGCCCCTaGGACCGCAGTGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRRAPLMGGLGCTLGSEALPSP*DRSVTG Trigger: GCCTGTGACACTGCGGTCCAAGGGGCTGGGGAGAGC...CTCACTTCCCAGAGTGCAGCCCAACCCACCCATTAAAGGTGCCCTTCTCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGGCTTTGCCAGCTGCATaGCTCCCCAGCCGCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SAGPRERSGEDWLLGEHWALPAA*LPSRFM Trigger: CATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGC...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 90 bp | GCTGCATTGCTCCCCAGCCGCTTCATGGCAGCCAGGACTGTCTCATaGATGCTTTGGGCCACCACTGCATCAGGAGCCTGCAGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AALLPSRFMAARTVS*MLWATTASGACSQS Trigger: GCTCTGGCTGCAGGCTCCTGATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | TTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCGCTTTGCCAGCTGCATaGCTCCCCAGCCGCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLGPEKGQVRTGCLGSALPAA*LPSRFM Trigger: CATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGC...GCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | CATTGCTCCCCAGCCGCTTCATGGCAGCCAGGACTGTCTCATGAATaGTTTGGGCCACCACTGCATCAGGAGCCTGCAGCCAGAGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCSPAASWQPGLSHE*FGPPLHQEPAARAH Trigger: GTGAGCTCTGGCTGCAGGCTCCTGATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | CAGGAACACTCTTTGGAGGATTTCCCTGTGGCGGTGGCTCAGCTTTaGCAGCTGCATTGCTCCCCAGCCGCTTCATGGCAGCCAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QEHSLEDFPVAVAQL*QLHCSPAASWQPGL Trigger: CAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | GGTAGGAGCTGCAGGAACACTCTTTGGAGGATTTCCCTGTGGCGGTaGCTCAGCTTTGCCAGCTGCATTGCTCCCCAGCCGCTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSCRNTLWRISLWR*LSFASCIAPQPLHG Trigger: GCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 90 bp | TGTCGGGGTAGGAGCTGCAGGAACACTCTTTGGAGGATTTCCCTGTaGCGGTGGCTCAGCTTTGCCAGCTGCATTGCTCCCCAGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRGRSCRNTLWRISL*RWLSFASCIAPQPL Trigger: AAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCTACCCCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCTTGGGGAGCACTGGCTGCAGGAACACTCTTaGGAGGATTTCCCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAGPRERSGEDWLLGEHWLQEHS*EDFPVA Trigger: CGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAG...CCAGTGCTCCCCAAGCAGCCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | TTGGAGGATTTCCCTGTGGCGGTGGCTCAGCTTTGCCAGCTGCATTaGTCCCCAGCCGCTTCATGGCAGCCAGGACTGTCTCATGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LEDFPVAVAQLCQLH*SPAASWQPGLSHEC Trigger: GCATTCATGAGACAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | ACTCTTTGGAGGATTTCCCTGTGGCGGTGGCTCAGCTTTGCCAGCTaGATTGCTCCCCAGCCGCTTCATGGCAGCCAGGACTGTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLWRISLWRWLSFAS*IAPQPLHGSQDCLM Trigger: CATGAGACAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | GGGGACAGAGCTGTCCCAAACCAGGATGAGAGTCTTCATCCAGGCTTGGGCCACAGACTCAGGGGCCTCTaGGGGACTGAAACCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDRAVPNQDESLHPGLGHRLRGL*GTETHS Trigger: GCTATGGGTTTCAGTCCCCAAGAGGCCCCTGAGTCT...GTGGCCCAAGCCTGGATGAAGACTCTCATCCTGGTTTGGGACAGCTCTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 90 bp | CTAGAACTTGATGCTGGCATAGCTATGTGGACTCTTCCCTGGGGCTaGTCCAGGAACCTCCAGGGGAGGGACCAGGTCCAGGTCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: LELDAGIAMWTLPWG*SRNLQGRDQVQVHI Trigger: TATGTGGACCTGGACCTGGTCCCTCCCCTGGAGGTTCCTGGAGCAGCCCCAGGGAAGAGTCCACATAGCTATGCCAGCATCAAGTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 90 bp | TTGTGCTGCCGATGCAGGGATTTCATATGGTGTCGGGGTAGGAGCTaGAGGAACACTCTTTGGAGGATTTCCCTGTGGCGGTGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCCRCRDFIWCRGRS*RNTLWRISLWRWLS Trigger: GCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCTACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS-3UTR CAA 90 bp | GTGAGGAACTCGTTTGTGTCTGCTGGGCCCAGAGAAAGGTCAGGTGAGGACTGGCTGCAGGAACACTCTTaGGAGGATTTCCCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VRNSFVSAGPRERSGEDWLQEHS*EDFPVA Trigger: CGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAG...CCAGTCCTCACCTGACCTTTCTCTGGGCCCAGCAGACACAAACGAGTTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 90 bp | AATCTATTCATGGGCACATACTCTGTGCTCTCACAATCCTCGAGCTaGTTATTAGGATCTGCCCTGGCAGGGGTGGGAGGAAGGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: NLFMGTYSVLSQSSS*LLGSALAGVGGRPG Trigger: CCCAGGCCTTCCTCCCACCCCTGCCAGGGCAGATCCTAATAAGCAGCTCGAGGATTGTGAGAGCACAGAGTATGTGCCCATGAATAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS CCA 90 bp | CTCACTGGGGCTTCTTGCTTGTGCTGCCGATGCAGGGATTTCATATaGTGTCGGGGTAGGAGCTGCAGGAACACTCTTTGGAGGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LTGASCLCCRCRDFI*CRGRSCRNTLWRIS Trigger: GGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCTACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGCCCCAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 90 bp | GGCTACAATGGGCACCCGGATGCCCAAGTTCAGACTCCCTGGCCTTaGGCTCGTAGTAAAAAGGCCCAGGTAAAAATCTATTCATGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GYNGHPDAQVQTPWP*ARSKKAQVKIYSWA Trigger: TGCCCATGAATAGATTTTTACCTGGGCCTTTTTACTACGAGCTCAAGGCCAGGGAGTCTGAACTTGGGCATCCGGGTGCCCATTGTAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 72 bp | GGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATaGTTGCTGCTCTGCTTCGCTGGCCGCCGCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: GGGAHLEQGAVP*LLLCFAGRRHA Trigger: GGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CAA 90 bp | GGCTGCGGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATGCTaGCTGCTCTGCTTCGCTGGCCGCCGCCACGCCCAGGCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GCGGGAHLEQGAVPC*LLCFAGRRHAQAAV Trigger: GACAGCAGCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACCGCCGCAGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 72 bp | GAGCCGCACGTCGGGCAGGCAGGGCCAAGGAAACGGTaGGCCGAGGGACACGTCGGTGCACTCGCCCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: EPHVGQAGPRKR*AEGHVGALAPG Trigger: TCCGGGGGCGAGTGCACCGACGTGTCCCTCGGCTCACCGTTTCCTTGGCCCTGCCTGCCCGACGTGCGGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | GCGCGCACCTCGAGCAGGGCGCTGTACCATGCTTGCTaGTCTGCTTCGCTGGCCGCCGCCACGCCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ARTSSRALYHAC*SASLAAATPRL Trigger: CAGCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | GTGGCGCGCACCTCGAGCAGGGCGCTGTACCATGCTTaGTGCTCTGCTTCGCTGGCCGCCGCCACGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VARTSSRALYHA*CSASLAAATPR Trigger: CCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CAA 72 bp | GGTGGCGCGCACCTCGAGCAGGGCGCTGTACCATGCTaGCTGCTCTGCTTCGCTGGCCGCCGCCACGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GGAHLEQGAVPC*LLCFAGRRHAQ Trigger: CTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTGCGCGCCACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | CACCTCGAGCAGGGCGCTGTACCATGCTTGCTGCTCTaGTTCGCTGGCCGCCGCCACGCCCAGGCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HLEQGAVPCLLL*FAGRRHAQAAV Trigger: GACAGCAGCCTGGGCGTGGCGGCGGCCAGCGAAGCAGAGCAGCAAGCATGGTACAGCGCCCTGCTCGAGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | GCGCGCAGCACGAAAAAGCGGCGGCGCTGGGACTTCTaGTTCCTCAGATGGCCACAGAGCCGCACGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARSTKKRRRWDF*FLRWPQSRTSG Trigger: GCCCGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | TTGGGGACTGAAACCCATAGCAGTAGCAGCAGCGGCTaGGGCGGTGGCGCGCACCTCGAGCAGGGCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LGTETHSSSSSG*GGGAHLEQGAV Trigger: TACAGCGCCCTGCTCGAGGTGCGCGCCACCGCCGCAGCCGCTGCTGCTACTGCTATGGGTTTCAGTCCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | CAGGCACAGGCGATAGCTGCCGCTGCTCAGGCCTTGTaGTCTCCCCAGCCCCTTGGACCGCAGTGTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: QAQAIAAAAQAL*SPQPLGPQCHR Trigger: CCTGTGACACTGCGGTCCAAGGGGCTGGGGAGAGCACAAGGCCTGAGCAGCGGCAGCTATCGCCTGTGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GGTGGGTCAGCGCGCAGCACGAAAAAGCGGCGGCGCTaGGACTTCTGCTTCCTCAGATGGCCACAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGSARSTKKRRR*DFCFLRWPQSR Trigger: GCGGCTCTGTGGCCATCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GGCACCCTCCAGGCTAACGGTACGCCGGGGTCTAGGTaGGCGGCAGCCGCTGGCCAAGAACTTCTTCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTLQANGTPGSR*AAAAGQELLLA Trigger: AGCGAGAAGAAGTTCTTGGCCAGCGGCTGCCGCCCACCTAGACCCCGGCGTACCGTTAGCCTGGAGGGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | AAAAAGCGGCGGCGCTGGGACTTCTGCTTCCTCAGATaGCCACAGAGCCGCACGTCGGGCAGGCAGGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KKRRRWDFCFLR*PQSRTSGRQGQ Trigger: TTGGCCCTGCCTGCCCGACGTGCGGCTCTGTGGCCATCTGAGGAAGCAGAAGTCCCAGCGCCGCCGCTTTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CAA 90 bp | AAGCGCAGGACTGGTGGTGGCGTTGCCCGGCTGTCTCTGGAACCTTaGCTTCCAGGCTTTCGCAGGAGGCTCAGGGCCCCAGAACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRRTGGGVARLSLEP*LPGFRRRLRAPEPR Trigger: CCTGGGTTCTGGGGCCCTGAGCCTCCTGCGAAAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GAACTTCTTCTCGCTCTCGTAGCACTCCAGGCGTGGTaGGTCAGCGCGCAGCACGAAAAAGCGGCGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ELLLALVALQAW*VSAQHEKAAAL Trigger: CAGCGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACCACGCCTGGAGTGCTACGAGAGCGAGAAGAAGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GCGGCGCACACTGAGCAAGGACAAGCGCAGGACTGGTaGTGGCGTTGCCCGGCTGTCTCTGGAACCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAHTEQGQAQDW*WRCPAVSGTFA Trigger: AGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CAA 72 bp | ACTGGTGGTGGCGTTGCCCGGCTGTCTCTGGAACCTTaGCTTCCAGGCTTTCGCAGGAGGCTCAGGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TGGGVARLSLEP*LPGFRRRLRAP Trigger: TGGGGCCCTGAGCCTCCTGCGAAAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | TTCCCTGTGGCGGTGGCTCAGCTTTGCCAGCTGCATTaGTCCCCAGCCGCTTCATGGCAGCCAGGACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: FPVAVAQLCQLH*SPAASWQPGLS Trigger: AGACAGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | AGGATTTCCCTGTGGCGGTGGCTCAGCTTTGCCAGCTaGATTGCTCCCCAGCCGCTTCATGGCAGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RISLWRWLSFAS*IAPQPLHGSQD Trigger: GTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | GATGCTGGCATAGCTATGTGGACTCTTCCCTGGGGCTaGTCCAGGAACCTCCAGGGGAGGGACCAGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DAGIAMWTLPWG*SRNLQGRDQVQ Trigger: CTGGACCTGGTCCCTCCCCTGGAGGTTCCTGGAGCAGCCCCAGGGAAGAGTCCACATAGCTATGCCAGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS CCA 72 bp | CAAGAACTTCTTCTCGCTCTCGTAGCACTCCAGGCGTaGTGGGTCAGCGCGCAGCACGAAAAAGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: QELLLALVALQA*WVSAQHEKAAA Trigger: CGCCGCCGCTTTTTCGTGCTGCGCGCTGACCCACCACGCCTGGAGTGCTACGAGAGCGAGAAGAAGTTCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | AGCGCAGGACTGGTGGTGGCGTTGCCCGGCTGTCTCTaGAACCTTTGCTTCCAGGCTTTCGCAGGAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SAGLVVALPGCL*NLCFQAFAGGS Trigger: TGAGCCTCCTGCGAAAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GCGCACACTGAGCAAGGACAAGCGCAGGACTGGTGGTaGCGTTGCCCGGCTGTCTCTGGAACCTTTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHTEQGQAQDWW*RCPAVSGTFAS Trigger: GGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | ACAGCGGCGCACACTGAGCAAGGACAAGCGCAGGACTaGTGGTGGCGTTGCCCGGCTGTCTCTGGAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TAAHTEQGQAQD*WWRCPAVSGTF Trigger: AAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGTGTGCGCCGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | CCAGCCGCTTCATGGCAGCCAGGACTGTCTCATGAATaGTTTGGGCCACCACTGCATCAGGAGCCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAASWQPGLSHE*FGPPLHQEPAA Trigger: GGCTGCAGGCTCCTGATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCCTGGCTGCCATGAAGCGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CAA 90 bp | GCAGGAACACTCTTTGGAGGATTTCCCTGTGGCGGTGGCTCAGCTTaGCCAGCTGCATTGCTCCCCAGCCGCTTCATGGCAGCCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: AGTLFGGFPCGGGSA*PAALLPSRFMAART Trigger: AGTCCTGGCTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 72 bp | TCCCCAGAGAGCTCTGACCCTTGGGAAGAGCGGGGCTaGGCCACTGTGGGTCTCCATCTGTCTCTAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPESSDPWEERG*ATVGLHLSLRL Trigger: TAGCCTTAGAGACAGATGGAGACCCACAGTGGCTCAGCCCCGCTCTTCCCAAGGGTCAGAGCTCTCTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 72 bp | ACTGAGCAAGGACAAGCGCAGGACTGGTGGTGGCGTTaGCCGGCTGTCTCTGGAACCTTTGCTTCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TEQGQAQDWWWR*PAVSGTFASRL Trigger: AAGCCTGGAAGCAAAGGTTCCAGAGACAGCCGGGCAACGCCACCACCAGTCCTGCGCTTGTCCTTGCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | TCTTTGGAGGATTTCCCTGTGGCGGTGGCTCAGCTTTaGCAGCTGCATTGCTCCCCAGCCGCTTCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLEDFPVAVAQL*QLHCSPAASWQ Trigger: CTGCCATGAAGCGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | TGCAGGAACACTCTTTGGAGGATTTCCCTGTGGCGGTaGCTCAGCTTTGCCAGCTGCATTGCTCCCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CRNTLWRISLWR*LSFASCIAPQP Trigger: CGGCTGGGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GCCACTGTGGGTCTCCATCTGTCTCTAAGGCTACAATaGGCACCCGGATGCCCAAGTTCAGACTCCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATVGLHLSLRLQ*APGCPSSDSLA Trigger: GGCCAGGGAGTCTGAACTTGGGCATCCGGGTGCCCATTGTAGCCTTAGAGACAGATGGAGACCCACAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS CCA 72 bp | GAACTTGATGCTGGCATAGCTATGTGGACTCTTCCCTaGGGCTGCTCCAGGAACCTCCAGGGGAGGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELDAGIAMWTLP*GCSRNLQGRDQ Trigger: CTGGTCCCTCCCCTGGAGGTTCCTGGAGCAGCCCCAGGGAAGAGTCCACATAGCTATGCCAGCATCAAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS CAA 72 bp | CCGCTTCATGGCAGCCAGGACTGTCTCATGAATGCTTaGGGCCACCACTGCATCAGGAGCCTGCAGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLHGSQDCLMNA*GHHCIRSLQPE Trigger: CTCTGGCTGCAGGCTCCTGATGCAGTGGTGGCCCAAAGCATTCATGAGACAGTCCTGGCTGCCATGAAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | TGCTCGCTCACTGGGGCTTCTTGCTTGTGCTGCCGATaGAGGGATTTCATATGGTGTCGGGGTAGGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSLTGASCLCCR*RDFIWCRGRSC Trigger: GCAGCTCCTACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGCCCCAGTGAGCGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | AGGAGCTGCAGGAACACTCTTTGGAGGATTTCCCTGTaGCGGTGGCTCAGCTTTGCCAGCTGCATTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCRNTLWRISL*RWLSFASCIAP Trigger: GGGAGCAATGCAGCTGGCAAAGCTGAGCCACCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | CTGCTTTGCTCGCTCACTGGGGCTTCTTGCTTGTGCTaGCGATGCAGGGATTTCATATGGTGTCGGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLCSLTGASCLC*RCRDFIWCRGR Trigger: CCTACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGCCCCAGTGAGCGAGCAAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | GTCCTGCTTTGCTCGCTCACTGGGGCTTCTTGCTTGTaGTGCCGATGCAGGGATTTCATATGGTGTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLCSLTGASCL*CRCRDFIWCRG Trigger: ACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGCCCCAGTGAGCGAGCAAAGCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | CGATGCAGGGATTTCATATGGTGTCGGGGTAGGAGCTaGAGGAACACTCTTTGGAGGATTTCCCTGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RCRDFIWCRGRS*RNTLWRISLWR Trigger: CCGCCACAGGGAAATCCTCCAAAGAGTGTTCCTGCAGCTCCTACCCCGACACCATATGAAATCCCTGCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS GCA 72 bp | ATGGGCACATACTCTGTGCTCTCACAATCCTCGAGCTaGTTATTAGGATCTGCCCTGGCAGGGGTGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MGTYSVLSQSSS*LLGSALAGVGG Trigger: TCCTCCCACCCCTGCCAGGGCAGATCCTAATAAGCAGCTCGAGGATTGTGAGAGCACAGAGTATGTGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS CCA 72 bp | GCTTCTTGCTTGTGCTGCCGATGCAGGGATTTCATATaGTGTCGGGGTAGGAGCTGCAGGAACACTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASCLCCRCRDFI*CRGRSCRNTLW Trigger: CCAAAGAGTGTTCCTGCAGCTCCTACCCCGACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS TCA 72 bp | GGGCACCCGGATGCCCAAGTTCAGACTCCCTGGCCTTaGGCTCGTAGTAAAAAGGCCCAGGTAAAAATCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GHPDAQVQTPWP*ARSKKAQVKIY Trigger: ATAGATTTTTACCTGGGCCTTTTTACTACGAGCTCAAGGCCAGGGAGTCTGAACTTGGGCATCCGGGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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| CDS GCA 72 bp | GAAGTAGTCCTGCTTTGCTCGCTCACTGGGGCTTCTTaGTTGTGCTGCCGATGCAGGGATTTCATATGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVVLLCSLTGAS*LCCRCRDFIWC Trigger: ACACCATATGAAATCCCTGCATCGGCAGCACAAGCAAGAAGCCCCAGTGAGCGAGCAAAGCAGGACTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057314.4 ENSMUST00000196511.2 |
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| CDS CCA 72 bp | GCTCGTAGTAAAAAGGCCCAGGTAAAAATCTATTCATaGGCACATACTCTGTGCTCTCACAATCCTCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSKKAQVKIYS*AHTLCSHNPRA Trigger: AGCTCGAGGATTGTGAGAGCACAGAGTATGTGCCCATGAATAGATTTTTACCTGGGCCTTTTTACTACGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057314.4 |
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