RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055980

Ensembl transcript IDs: ENSMUST00000069799.3

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGTTGATCAGGGCAACTGGGCAACTGCAGTGCCTCCCAACCCTTaGTCCTTCCTTGCAGCCCCACCCAGGAGGCTCAACCCTTCCCAG +
Preference number: 1 (lower is better)
Translates to: PVDQGNWATAVPPNP*SFLAAPPRRLNPSQ
Trigger: CTGGGAAGGGTTGAGCCTCCTGGGTGGGGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCACTGCAGTTGCCCAGTTGCCCTGATCAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 90 bp TCTTTGAATAGAGCCAGGGGTCCCCAACCAGTTGATCAGGGCAACTaGGCAACTGCAGTGCCTCCCAACCCTTGCTCCTTCCTTGCAGCC +
Preference number: 1 (lower is better)
Translates to: SLNRARGPQPVDQGN*ATAVPPNPCSFLAA
Trigger: GGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCACTGCAGTTGCCCAGTTGCCCTGATCAACTGGTTGGGGACCCCTGGCTCTATTCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 90 bp ACTACTGACAAGGTTGTGCCTGCTCACACACCTGGAAGGACACCCTaGTTCTTTCAAGACTTTCAAGCAGCCAGAGCAGGTGAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: TTDKVVPAHTPGRTP*FFQDFQAARAGEES
Trigger: GCTCTCCTCACCTGCTCTGGCTGCTTGAAAGTCTTGAAAGAAGCAGGGTGTCCTTCCAGGTGTGTGAGCAGGCACAACCTTGTCAGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 90 bp TGCTGCAGGGCTGAGTTCACAGGGACTCAAAGGGAGCCTGATCATTaGATCTTCACTGTCATTTCAGGGAGTTTCAAGGCAAAGACAATT +
Preference number: 1 (lower is better)
Translates to: CCRAEFTGTQREPDH*IFTVISGSFKAKTI
Trigger: AATTGTCTTTGCCTTGAAACTCCCTGAAATGACAGTGAAGATTCAATGATCAGGCTCCCTTTGAGTCCCTGTGAACTCAGCCCTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 90 bp GAGGCGCATCATGGAACACGGTTTCAGAGTAGAGGAAACGTCGGTTaGAAATTTGATGAGAGTAAACCCATTCTCTTGGTGGTAGGAAGT +
Preference number: 1 (lower is better)
Translates to: EAHHGTRFQSRGNVG*KFDESKPILLVVGS
Trigger: ACTTCCTACCACCAAGAGAATGGGTTTACTCTCATCAAATTTGCAACCGACGTTTCCTCTACTCTGAAACCGTGTTCCATGATGCGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 90 bp TCCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTaGAGTTCAGTCAATGAACTCCTGAGGATTGTACAAGGTAAACAA +
Preference number: 1 (lower is better)
Translates to: SGVTVLSCCLAQCRT*SSVNELLRIVQGKQ
Trigger: TTGTTTACCTTGTACAATCCTCAGGAGTTCATTGACTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 90 bp CTAGAAGCCACTAGAAGCCCCATTAACATAAGCCCTTGGTTGGCCTaGAAATTCTTGGAAATAGATAAAGGCCAACCCCCTTTAATAGGA +
Preference number: 1 (lower is better)
Translates to: LEATRSPINISPWLA*KFLEIDKGQPPLIG
Trigger: TCCTATTAAAGGGGGTTGGCCTTTATCTATTTCCAAGAATTTGCAGGCCAACCAAGGGCTTATGTTAATGGGGCTTCTAGTGGCTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 90 bp AAGTTTATGCACACTAATTGTTCCGGTGTCACAGTGCTTTCTTGTTaGTTGGCACAATGTAGAACGTGCAGTTCAGTCAATGAACTCCTG +
Preference number: 1 (lower is better)
Translates to: KFMHTNCSGVTVLSC*LAQCRTCSSVNELL
Trigger: CAGGAGTTCATTGACTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGGAACAATTAGTGTGCATAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 90 bp CAAGAAATAGCCACACATGTAGCATCAGTACTGATTTGTCATTATTaGTCCAGACGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCT +
Preference number: 1 (lower is better)
Translates to: QEIATHVASVLICHY*SRRLIINGVPSFPA
Trigger: AGCTGGAAATGAAGGGACTCCATTAATGATCAACCGTCTGGATCAATAATGACAAATCAGTACTGATGCTACATGTGTGGCTATTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 90 bp TCTACGTTTGTAGTTGGTAAGTTAGTCAAGAGTGTCCCTGACCTTTaGAAGTTAGCAAGAAATAGCCACACATGTAGCATCAGTACTGAT +
Preference number: 1 (lower is better)
Translates to: STFVVGKLVKSVPDL*KLARNSHTCSISTD
Trigger: ATCAGTACTGATGCTACATGTGTGGCTATTTCTTGCTAACTTTCAAAGGTCAGGGACACTCTTGACTAACTTACCAACTACAAACGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp AGGGCAACTGGGCAACTGCAGTGCCTCCCAACCCTTGCTCCTTCCTaGCAGCCCCACCCAGGAGGCTCAACCCTTCCCAGAAGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: RATGQLQCLPTLAPS*QPHPGGSTLPRSRV
Trigger: CACTCTACTTCTGGGAAGGGTTGAGCCTCCTGGGTGGGGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCACTGCAGTTGCCCAGTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp TTGCAGCCCCACCCAGGAGGCTCAACCCTTCCCAGAAGTAGAGTGTaGCTCCTCCCTGCTGCAGGGCTGAGTTCACAGGGACTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LQPHPGGSTLPRSRV*LLPAAGLSSQGLKG
Trigger: CCCTTTGAGTCCCTGTGAACTCAGCCCTGCAGCAGGGAGGAGCAACACTCTACTTCTGGGAAGGGTTGAGCCTCCTGGGTGGGGCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAGTGCCTCCCAACCCTTaGTCCTTCCTTGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: TQILEGREQAACFLLTLAVPPNP*SFLAAP
Trigger: TGGGGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCAC...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAACTGGGCAACTGCAGTaGCTCCCAACCCTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: TQILEGREQAACFLLTLATGQLQ*LPTLAP
Trigger: AGGAGCAAGGGTTGGGAGGCACTGCAGTTGCCCAGT...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTAGTGTTGCTCCTCCCTaGTGCAGGGCTGAGTTCACA +
Preference number: 2 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLSVAPP*CRAEFT
Trigger: TGTGAACTCAGCCCTGCAGCAGGGAGGAGCAACACT...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCCCTTGCTCCTTCCTTaGAGCCCCACCCAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFPLLLP*SPTQEA
Trigger: AGCCTCCTGGGTGGGGCTGCAAGGAAGGAGCAAGGG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp AGAGGAAACGTCGGTTGCAAATTTGATGAGAGTAAACCCATTCTCTaGGTGGTAGGAAGTGCACCAGCTCTTCGTGACCAGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: RGNVGCKFDESKPIL*VVGSAPALRDQLSL
Trigger: TAAGGACAGCTGGTCACGAAGAGCTGGTGCACTTCCTACCACCAAGAGAATGGGTTTACTCTCATCAAATTTGCAACCGACGTTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp TTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTaGATGCTTTCATCAACCCCAGCTCGGGTAAAGTCTAGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: FQPGYQQLPVLSQPS*MLSSTPARVKSRRS
Trigger: GCTTCTTCTAGACTTTACCCGAGCTGGGGTTGATGAAAGCATCAAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTCATCGTACCATCTACTaGAGAGGAAGACGTGAGGTC +
Preference number: 2 (lower is better)
Translates to: QEISAWVPATSSSKSAKFHRTIY*RGRREV
Trigger: GACCTCACGTCTTCCTCTTCAGTAGATGGTACGATG...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCGTCTATTTATCTCTTTaGATAGAGCCAGGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIVYLSL*IEPGVP
Trigger: GGGGACCCCTGGCTCTATTCAAAGAGATAAATAGAC...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTTCCGAGGAGAGCTTTTaGCTTGAAGGGATTGCTCAT +
Preference number: 2 (lower is better)
Translates to: QEISAWVPATSSSKSAKFSEESF*LEGIAH
Trigger: ATGAGCAATCCCTTCAAGTCAAAAGCTCTCCTCGGA...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAACATTGTACATCTGGTTaGCTGAACACTAACCCGAAC +
Preference number: 2 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEHCTSG*LNTNPN
Trigger: GTTCGGGTTAGTGTTCAGTCAACCAGATGTACAATG...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAAGCTTTACAGGCAAATaGTTGGGGCTGACATTGTTC +
Preference number: 2 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQSFTGK*LGLTLF
Trigger: GAACAATGTCAGCCCCAACCATTTGCCTGTAAAGCT...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGAAAAGGAGGATTTGCTaGGGTCATTTAGGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQKRRIC*GHLGLH
Trigger: ATGAAGACCTAAATGACCTCAGCAAATCCTCCTTTT...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGAGTCTGGGTACCCATaGGTTAAAAGGAGGATTTGC +
Preference number: 2 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFESGYP*VKRRIC
Trigger: GCAAATCCTCCTTTTAACTCATGGGTACCCAGACTC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCCTAACTGACAACAAATaGTGTCATTTGGCGAGTTCC +
Preference number: 2 (lower is better)
Translates to: QRDNIPISWCGHPKCQAILTDNK*CHLASS
Trigger: GGAACTCGCCAAATGACATCATTTGTTGTCAGTTAG...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCAGTGTCCCTGACCTTTaGAAGTTAGCAAGAAATAGC +
Preference number: 2 (lower is better)
Translates to: QRDNIPISWCGHPKCQAISVPDL*KLARNS
Trigger: GCTATTTCTTGCTAACTTTCAAAGGTCAGGGACACT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCAGCCCTTGGTTGGCCTaGAAATTCTTGGAAATAGAT +
Preference number: 2 (lower is better)
Translates to: QRDNIPISWCGHPKCQAISPWLA*KFLEID
Trigger: ATCTATTTCCAAGAATTTGCAGGCCAACCAAGGGCT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp TTTATGCACACTAATTGTTCCGGTGTCACAGTGCTTTCTTGTTGCTaGGCACAATGTAGAACGTGCAGTTCAGTCAATGAACTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: FMHTNCSGVTVLSCC*AQCRTCSSVNELLR
Trigger: CCTCAGGAGTTCATTGACTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGGAACAATTAGTGTGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGTGCAGTTCAGTCAATaGACTCCTGAGGATTGTACA +
Preference number: 2 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFVQFSQ*TPEDCT
Trigger: TGTACAATCCTCAGGAGTTCATTGACTGAACTGCAC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAACAAAACTGTAACGGATaGATCGTACCATCTACTGAA +
Preference number: 2 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQQNCNG*IVPSTE
Trigger: TTCAGTAGATGGTACGATGCATCCGTTACAGTTTTG...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTACAGTGCTTTCTTGTTaGTTGGCACAATGTAGAACG +
Preference number: 2 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLTVLSC*LAQCRT
Trigger: CGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGT...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCGCTGACATTGTTCACTaGTCTCTTTTTAGTAACTCA +
Preference number: 2 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESADIVH*SLFSNS
Trigger: TGAGTTACTAAAAAGAGACCAGTGAACAATGTCAGC...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCCCAATGTCAGTTTCCTaGTATAGGACCTCTTTGTAT +
Preference number: 2 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIPMSVS*YRTSLY
Trigger: ATACAAAGAGGTCCTATACCAGGAAACTGACATTGG...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 90 bp CTACTGACTCAATACAAAGCAAGGGAGATAGAAACCAGGAGACGATaGTCCAGTCTGTTTGTTCCTGTTCTCACCTCAAGTGTCAATAAC +
Preference number: 2 (lower is better)
Translates to: LLTQYKAREIETRRR*SSLFVPVLTSSVNN
Trigger: GTTATTGACACTTGAGGTGAGAACAGGAACAAACAGACTGGACAATCGTCTCCTGGTTTCTATCTCCCTTGCTTTGTATTGAGTCAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAACTGATTTGTCATTATTaGTCCAGACGGTTGATCATT +
Preference number: 2 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQLICHY*SRRLII
Trigger: AATGATCAACCGTCTGGATCAATAATGACAAATCAG...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGCACAATGTAGAACGTaGAGTTCAGTCAATGAACTC +
Preference number: 2 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFAQCRT*SSVNEL
Trigger: GAGTTCATTGACTGAACTGCACGTTCTACATTGTGC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGGCAAATGGGCCAATTaGATTCATTTCAAACACACA +
Preference number: 2 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFGKWAN*IHFKHT
Trigger: TGTGTGTTTGAAATGAATGCAATTGGCCCATTTGCC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCAGGGAGCCTGATCATTaGATCTTCACTGTCATTTCA +
Preference number: 2 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFREPDH*IFTVIS
Trigger: TGAAATGACAGTGAAGATTCAATGATCAGGCTCCCT...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACCAGTCAATGAACTCCTaGGGATTGTACAAGGTAAAC +
Preference number: 2 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYQSMNS*GLYKVN
Trigger: GTTTACCTTGTACAATCCTCAGGAGTTCATTGACTG...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR TCA 90 bp TTTCGCCCAAAAGAAAGCTATCATCATAGCCAAGGGAGCATACCTGTTCTTTTCTTTAAAACAGAACATTaGACACCTCAGTTCCACATC +
Preference number: 2 (lower is better)
Translates to: FRPKESYHHSQGSIPVLFFKTEH*TPQFHI
Trigger: GATGTGGAACTGAGGTGTTCAATGTTCTGTTTTAAA...GAAAAGAACAGGTATGCTCCCTTGGCTATGATGATAGCTTTCTTTTGGGCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACTTCAGGTATAGTCATTaGCATTTCTGCTGGATAAAG +
Preference number: 2 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYFRYSH*HFCWIK
Trigger: CTTTATCCAGCAGAAATGGCAATGACTATACCTGAA...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCAGAGGAAACGTCGGTTaGAAATTTGATGAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFRGNVG*KFDESK
Trigger: TTTACTCTCATCAAATTTGCAACCGACGTTTCCTCT...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACTACAATGGAAGTCTGTaGTTTCCTCTCTTTGTTATA +
Preference number: 2 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYYNGSL*FPLFVI
Trigger: TATAACAAAGAGAGGAAACCACAGACTTCCATTGTA...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp GGCAACTGCAGTGCCTCCCAACCCTTGCTCCTTCCTTaGAGCCCCACCCAGGAGGCTCAACCCTTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: GNCSASQPLLLP*SPTQEAQPFPE
Trigger: TTCTGGGAAGGGTTGAGCCTCCTGGGTGGGGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCACTGCAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp CCCAACCAGTTGATCAGGGCAACTGGGCAACTGCAGTaGCTCCCAACCCTTGCTCCTTCCTTGCAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: PNQLIRATGQLQ*LPTLAPSLQPH
Trigger: GTGGGGCTGCAAGGAAGGAGCAAGGGTTGGGAGGCACTGCAGTTGCCCAGTTGCCCTGATCAACTGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp AAGGTTGTGCCTGCTCACACACCTGGAAGGACACCCTaGTTCTTTCAAGACTTTCAAGCAGCCAGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: KVVPAHTPGRTP*FFQDFQAARAG
Trigger: ACCTGCTCTGGCTGCTTGAAAGTCTTGAAAGAAGCAGGGTGTCCTTCCAGGTGTGTGAGCAGGCACAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGGGGTCCCCAACCAGTaGATCAGGGCAACTGGGCAA +
Preference number: 3 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFGVPNQ*IRATGQ
Trigger: TTGCCCAGTTGCCCTGATCAACTGGTTGGGGACCCC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp CTGCTTCTTTCAAGACTTTCAAGCAGCCAGAGCAGGTaGGGAGAGCATCACCTCCTGCTAACATCCACCTTG +
Preference number: 3 (lower is better)
Translates to: LLLSRLSSSQSR*GEHHLLLTSTL
Trigger: CAAGGTGGATGTTAGCAGGAGGTGATGCTCTCCTCACCTGCTCTGGCTGCTTGAAAGTCTTGAAAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp AACCCCAGCCCAGCATGGAAGTCTTTTTGTTACTACTaGCAAGGTTGTGCCTGCTCACACACCTGGAAGGAC +
Preference number: 3 (lower is better)
Translates to: NPSPAWKSFCYY*QGCACSHTWKD
Trigger: GTCCTTCCAGGTGTGTGAGCAGGCACAACCTTGTCAGTAGTAACAAAAAGACTTCCATGCTGGGCTGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 72 bp AAACCCTTCAAGAAGCCAGCGCAAGAGATTTCAGCCTaGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAG +
Preference number: 3 (lower is better)
Translates to: KPFKKPAQEISA*VPATSSSKSAK
Trigger: CTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTGCGCTGGCTTCTTGAAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 72 bp GCAGGTGGATGGCAAAGGGATAACATACCCATCTCTTaGTGTGGACATCCCAAATGCCAAGCCATCATGGAT +
Preference number: 3 (lower is better)
Translates to: AGGWQRDNIPIS*CGHPKCQAIMD
Trigger: ATCCATGATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCCACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp AGCATGGAAGTCTTTTTGTTACTACTGACAAGGTTGTaGCTGCTCACACACCTGGAAGGACACCCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SMEVFLLLLTRL*LLTHLEGHPAS
Trigger: AGAAGCAGGGTGTCCTTCCAGGTGTGTGAGCAGGCACAACCTTGTCAGTAGTAACAAAAAGACTTCCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 72 bp CAGCGTGGACAAAGAGAGGTTTACATAGCAGGTGGATaGCAAAGGGATAACATACCCATCTCTTGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: QRGQREVYIAGG*QRDNIPISWCG
Trigger: TCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCCACCTGCTATGTAAACCTCTCTTTGTCCACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTGAATGCACTTGTCTCTaGAGCCTTCTCGGAGGCAAT +
Preference number: 3 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLECTCL*SLLGGN
Trigger: ATTGCCTCCGAGAAGGCTCAAGAGACAAGTGCATTC...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTCAAAGCCTAGGCCCCTaGAAAAACTCCAGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFQSLGP*KNSSQL
Trigger: AAGCTGGCTGGAGTTTTTCAAGGGGCCTAGGCTTTG...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTCCCGAACCTCAGCAGTaGGGGGTCTATTTATCTCTT +
Preference number: 3 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFPEPQQ*GVYLSL
Trigger: AAGAGATAAATAGACCCCCAACTGCTGAGGTTCGGG...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCTGGTTGGGGCTGACATaGTTCACTGGTCTCTTTTTA +
Preference number: 3 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIWLGLT*FTGLFL
Trigger: TAAAAAGAGACCAGTGAACAATGTCAGCCCCAACCA...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp GCTGAGTTCACAGGGACTCAAAGGGAGCCTGATCATTaGATCTTCACTGTCATTTCAGGGAGTTTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: AEFTGTQREPDH*IFTVISGSFKA
Trigger: TGCCTTGAAACTCCCTGAAATGACAGTGAAGATTCAATGATCAGGCTCCCTTTGAGTCCCTGTGAACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGTGCTTTCTTGTTGCTaGGCACAATGTAGAACGTGC +
Preference number: 3 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFVLSCC*AQCRTC
Trigger: GCACGTTCTACATTGTGCCAAGCAACAAGAAAGCAC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp CACCCACATTCTTCATTCCGAGGAGAGCTTTTGACTTaGAGGGATTGCTCATGTCTCCTTCTCTCTACAGTA +
Preference number: 3 (lower is better)
Translates to: HPHSSFRGELLT*RDCSCLLLSTV
Trigger: TACTGTAGAGAGAAGGAGACATGAGCAATCCCTTCAAGTCAAAAGCTCTCCTCGGAATGAAGAATGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp ATTAAGATCTGCAACACTGAACATTGTACATCTGGTTaGCTGAACACTAACCCGAACCTCAGCAGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: IKICNTEHCTSG*LNTNPNLSSWG
Trigger: CCCCCAACTGCTGAGGTTCGGGTTAGTGTTCAGTCAACCAGATGTACAATGTTCAGTGTTGCAGATCTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp ACTAGAAGCCCCATTAACATAAGCCCTTGGTTGGCCTaGAAATTCTTGGAAATAGATAAAGGCCAACCCCCT +
Preference number: 3 (lower is better)
Translates to: TRSPINISPWLA*KFLEIDKGQPP
Trigger: AGGGGGTTGGCCTTTATCTATTTCCAAGAATTTGCAGGCCAACCAAGGGCTTATGTTAATGGGGCTTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATaGTTTCGCCCAAAAGAAAGCTATCATCATAGCCAA +
Preference number: 3 (lower is better)
Translates to: MESLHFQLVLGL*FRPKESYHHSQ
Trigger: TTGGCTATGATGATAGCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp GATAACATACCCATCTCTTGGTGTGGACATCCCAAATaGCAAGCCATCATGGATAAGCTAGGGAAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: DNIPISWCGHPK*QAIMDKLGKGN
Trigger: ATTTCCCTTCCCTAGCTTATCCATGATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCAGTAAACCCATTCTCTaGGTGGTAGGAAGTGCACCA +
Preference number: 3 (lower is better)
Translates to: RQRQFTVPEETPSGIVIASKPIL*VVGSAP
Trigger: TGGTGCACTTCCTACCACCAAGAGAATGGGTTTACT...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCAGCATCAGTACTGATTaGTCATTATTGATCCAGACG +
Preference number: 3 (lower is better)
Translates to: QRDNIPISWCGHPKCQAISISTD*SLLIQT
Trigger: CGTCTGGATCAATAATGACAAATCAGTACTGATGCT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp CATTCTCTTGGTGGTAGGAAGTGCACCAGCTCTTCGTaGCCAGCTGTCCTTAAAGTTCAAGATGAAGTTTAT +
Preference number: 3 (lower is better)
Translates to: HSLGGRKCTSSS*PAVLKVQDEVY
Trigger: ATAAACTTCATCTTGAACTTTAAGGACAGCTGGTCACGAAGAGCTGGTGCACTTCCTACCACCAAGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp CACACTAATTGTTCCGGTGTCACAGTGCTTTCTTGTTaGTTGGCACAATGTAGAACGTGCAGTTCAGTCAAT +
Preference number: 3 (lower is better)
Translates to: HTNCSGVTVLSC*LAQCRTCSSVN
Trigger: ATTGACTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGGAACAATTAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp ATAAACACCCACATTCTTCATTCCGAGGAGAGCTTTTaGCTTGAAGGGATTGCTCATGTCTCCTTCTCTCTA +
Preference number: 3 (lower is better)
Translates to: INTHILHSEESF*LEGIAHVSFSL
Trigger: TAGAGAGAAGGAGACATGAGCAATCCCTTCAAGTCAAAAGCTCTCCTCGGAATGAAGAATGTGGGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR GCA 72 bp ACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTaGAGTTCAGTCAATGAACTCCTGAGGATTGTACAA +
Preference number: 3 (lower is better)
Translates to: TVLSCCLAQCRT*SSVNELLRIVQ
Trigger: TTGTACAATCCTCAGGAGTTCATTGACTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCTTTGACTTGAAGGGATaGCTCATGTCTCCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFFDLKG*LMSPSL
Trigger: GAGAGAAGGAGACATGAGCAATCCCTTCAAGTCAAA...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp GCCACACATGTAGCATCAGTACTGATTTGTCATTATTaGTCCAGACGGTTGATCATTAATGGAGTCCCTTCA +
Preference number: 3 (lower is better)
Translates to: ATHVASVLICHY*SRRLIINGVPS
Trigger: TGAAGGGACTCCATTAATGATCAACCGTCTGGATCAATAATGACAAATCAGTACTGATGCTACATGTGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR TCA 72 bp GTAGTTGGTAAGTTAGTCAAGAGTGTCCCTGACCTTTaGAAGTTAGCAAGAAATAGCCACACATGTAGCATC +
Preference number: 3 (lower is better)
Translates to: VVGKLVKSVPDL*KLARNSHTCSI
Trigger: GATGCTACATGTGTGGCTATTTCTTGCTAACTTTCAAAGGTCAGGGACACTCTTGACTAACTTACCAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCACGTCGGTTGCAAATTaGATGAGAGTAAACCCATTC +
Preference number: 3 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFTSVAN*MRVNPF
Trigger: GAATGGGTTTACTCTCATCAAATTTGCAACCGACGT...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR-3UTR CAA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACGGGCAAATGGGCCAATaGCATTCATTTCAAACACAC +
Preference number: 3 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYGQMGQ*HSFQTH
Trigger: GTGTGTTTGAAATGAATGCAATTGGCCCATTTGCCC...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 72 bp TCTCCTTCTCTCTACAGTATTTACAATGGAAGTCTGTaGTTTCCTCTCTTTGTTATAGTTCGCTTCCATTCA +
Preference number: 3 (lower is better)
Translates to: SPSLYSIYNGSL*FPLFVIVRFHS
Trigger: TGAATGGAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTAGAGAGAAGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CCA 72 bp ATTGCTCATGTCTCCTTCTCTCTACAGTATTTACAATaGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCG +
Preference number: 3 (lower is better)
Translates to: IAHVSFSLQYLQ*KSVVSSLCYSS
Trigger: CGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTAGAGAGAAGGAGACATGAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp CACCCAGGAGGCTCAACCCTTCCCAGAAGTAGAGTGTaGCTCCTCCCTGCTGCAGGGCTGAGTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: HPGGSTLPRSRV*LLPAAGLSSQG
Trigger: TCCCTGTGAACTCAGCCCTGCAGCAGGGAGGAGCAACACTCTACTTCTGGGAAGGGTTGAGCCTCCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGCCTGCCAGACCTCCTTaGACGCGGGTCCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQPARPP*TRVLDP
Trigger: CGGGTCCAGGACCCGCGTTCAAGGAGGTCTGGCAGG...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAGCCGCTGCCCCCTACTaGAGCCCCTGCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLAAAAPY*SPCSKG
Trigger: CCCTTTGGAGCAGGGGCTGCAGTAGGGGGCAGCGGC...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGTGGGTGGAGGGTTGTTaGGATGGTGCCTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQWVEGC*DGACAG
Trigger: CCCTGCGCAGGCACCATCTCAACAACCCTCCACCCA...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCCAGAAGGGGCTGCGCTaGTGCTGCTACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESQKGLR*CCYCCW
Trigger: CCAGCAGCAGTAGCAGCATCAGCGCAGCCCCTTCTG...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCCTGGACGGGACATGGTaGCTTCGCCATCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESLDGTW*LRHRWR
Trigger: CCTCCAGCGATGGCGAAGGCACCATGTCCCGTCCAG...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGTTGGGCTCGGGAGGGTaGAGGGAAGACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQLGSGG*REDCCC
Trigger: GCAGCAGCAGTCTTCCCTGCACCCTCCCGAGCCCAA...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGTCCACTGCCACCTCCTaGTGGGTAGGCAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQSTATS*WVGSGH
Trigger: ATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGA...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCCAGCACCACAGCGGCTaGCTCGGAGTTCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESQHHSG*LGVQLH
Trigger: GTGAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTG...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTGCAGTCGGCCTCCACTaGCACCTCCTGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFAVGLH*HLLVGR
Trigger: CCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGC...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCATACTCCAGGCGCGCTaGGCCCCCGGCCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFILQAR*APGLAG
Trigger: GCCAGCGAGGCCGGGGGCCCAGCGCGCCTGGAGTAT...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCCGATGCCGATGGGCGTaGGTCCTGTTGGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIRCRWA*VLLVLG
Trigger: CCCTAGCACCAACAGGACCCACGCCCATCGGCATCG...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAATGGGAGCAGCCAAGGTaGAGGCTCCCTTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQWEQPR*RLPCHP
Trigger: TGGGTGGCAAGGGAGCCTCCACCTTGGCTGCTCCCA...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAACGGGATAGGAGTGGGTaGGCACGAAGGCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQRDRSG*ARRRNA
Trigger: GGCATTCCGCCTTCGTGCCCACCCACTCCTATCCCG...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAGCGGTTGCTGGGCACTaGAGCCACCCCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEAVAGH*SHPRRH
Trigger: ATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGC...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCAGGACTGCCATCCACTaGTGCTGGACGGGACATGGT +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESRTAIH*CWTGHG
Trigger: ACCATGTCCCGTCCAGCATCAGTGGATGGCAGTCCT...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGCCCAGCAAGGAAGAGTaGGTAGCTTGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQPSKEE*VACSAV
Trigger: CACCGCTGAGCAAGCTACTCACTCTTCCTTGCTGGG...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCGCTCAAGTCCTCCCCTaGCTCTCCAACGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIAQVLP*LSNARA
Trigger: AGCTCTGGCGTTGGAGAGGCAGGGGAGGACTTGAGC...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAACTGCCACCTCCTGGTaGGTAGGCAGCGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLATATSW*VGSGHH
Trigger: ATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGT...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCATTCCTTTGCGGTTGCTaGGCACTGGAGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLAFLCGC*ALEPPQ
Trigger: CTGGGGTGGCTCCAGTGCCCAGCAACCGCAAAGGAA...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAATTCTCCTGGGCTTTTaGGCTCGGGAGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLAILLGF*AREGAG
Trigger: CCCTGCACCCTCCCGAGCCCAAAAGCCCAGGAGAAT...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCACGGGAAGAGACAGTCTaGAGTGGAGCCATGGCCACT +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLAREETV*SGAMAT
Trigger: AGTGGCCATGGCTCCACTTCAGACTGTCTCTTCCCG...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGGTTATCCAGATCTGCTaGACCCGCGGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQVIQIC*TRGFIS
Trigger: GGAGATGAAGCCGCGGGTGCAGCAGATCTGGATAAC...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAGTTCACCCTGGTGAATaGACTCATGCCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEVHPGE*THAPRS
Trigger: GGACCTGGGGGCATGAGTGCATTCACCAGGGTGAAC...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCCCCTACTGCAGCCCCTaGTCCAAAGGGCACCGTATT +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIPYCSP*SKGHRI
Trigger: AATACGGTGCCCTTTGGAGCAGGGGCTGCAGTAGGG...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTTCGCCCAAAAGAAAGCTATCATCATAGCCAAGGGAGCATACCTGTTCTTTTCGGGGGATCGAGCGTTTaGGGGCGCTCGACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: FRPKESYHHSQGSIPVLFGGSSV*GRSTCA
Trigger: GGCACAAGTCGAGCGCCCCCAAACGCTCGATCCCCC...GAAAAGAACAGGTATGCTCCCTTGGCTATGATGATAGCTTTCTTTTGGGCGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCTGCTGCTACTGCTGCTaGACCCACCTCCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESCCYCC*THLQCQ
Trigger: CTGACATTGGAGGTGGGTCCAGCAGCAGTAGCAGCA...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCTGGGGCTGCAAGACATaGTGGTGGGGATGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIWGCKT*WWGCVR
Trigger: CCTCACACATCCCCACCACCATGTCTTGCAGCCCCA...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAACCTTTCGAGGCAGGTaGGGCTGCAAGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKETFRGR*GCKTWW
Trigger: CCACCATGTCTTGCAGCCCCACCTGCCTCGAAAGGT...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCATCTCTAGGAGCTGGGTaGAGCTGGGGTGGACATCGA +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLASLGAG*SWGGHR
Trigger: TCGATGTCCACCCCAGCTCCACCCAGCTCCTAGAGA...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAGATGTGCCTGCGGAGTaGGTTCTCTTTCGAAACCGG +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEDVPAE*VLFRNR
Trigger: CCGGTTTCGAAAGAGAACTCACTCCGCAGGCACATC...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCTGGCTGGTGGGGTGTaGCCCAGGGAATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFLAGGV*PRESGV
Trigger: CACCCCAGATTCCCTGGGGCACACCCCACCAGCCAG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAGCGGCTGTTGGTCTGTaGAGCTGTGTCTACCTTTCG +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEAAVGL*SCVYLS
Trigger: CGAAAGGTAGACACAGCTGCACAGACCAACAGCCGC...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCACTCCACCACTCTCCTaGCAGGTTGCCCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIATPPLS*QVALRP
Trigger: AGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGT...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCCCTTCTCTGCAGCAATaGCTGTCCGCATGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESPSLQQ*LSACQH
Trigger: ATGCTGACATGCGGACAGGCATTGCTGCAGAGAAGG...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGTGCCCCAGGGAATCTaGGGTGACACTGCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFVPQGI*GDTAEG
Trigger: TCCTTCCGCAGTGTCACCCCAGATTCCCTGGGGCAC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAACATCAGTGTGGAGGTTaGAGGTGTCTGGACGGTGGT +
Preference number: 4 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQHQCGG*RCLDGG
Trigger: ACCACCGTCCAGACACCTCCAACCTCCACACTGATG...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp CCCAGCATGGAAGTCTTTTTGTTACTACTGACAAGGTaGTGCCTGCTCACACACCTGGAAGGACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSMEVFLLLLTR*CLLTHLEGHPA
Trigger: AGCAGGGTGTCCTTCCAGGTGTGTGAGCAGGCACAACCTTGTCAGTAGTAACAAAAAGACTTCCATGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAATCAGCTTCACAAAGCTaGTGGTCTTGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKESASQS*WSCWSG
Trigger: GCCTGACCAGCAAGACCATCAGCTTTGTGAAGCTGA...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCAAGTGGCCACAGCGTCTaGTATTCATCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLASGHSV*YSSAAA
Trigger: TGCTGCAGCTGATGAATATCAGACGCTGTGGCCACT...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCTGTGAGGGGGTCTTCTaGTGGGAAATGGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESCEGVF*WEMVGD
Trigger: ATCTCCTACCATTTCCCATCAGAAGACCCCCTCACA...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCGGGGCGCTCGACTTGTaGCGCCACTTCTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAGALDL*RHFFSF
Trigger: GAACGAGAAGAAGTGGCGGCACAAGTCGAGCGCCCC...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTGTCATGGTGGGCCTTTaGCCGATTATGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLVMVGL*PIMQLQ
Trigger: CTGCAGCTGCATAATCGGGCAAAGGCCCACCATGAC...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTACGGAGTCATCCACTTaGATCCAGAACTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFTESST*IQNSPG
Trigger: GCCTGGCGAGTTCTGGATGCAAGTGGATGACTCCGT...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTCCAGGGCGCTGGGTGTaGTTAAAGGACCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFPGRWV*LKDLGN
Trigger: ATTGCCAAGGTCCTTTAAGCACACCCAGCGCCCTGG...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TTTCGCCCAAAAGAAAGCTATCATCATAGCCAAGGGAGCATACCTGTTCTTTTCAGACGAAGATGCTGGTaGCTGGCACCCTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FRPKESYHHSQGSIPVLFRRRCW*LAPSSG
Trigger: GCCAGAGGAGGGTGCCAGGCACCAGCATCTTCGTCT...GAAAAGAACAGGTATGCTCCCTTGGCTATGATGATAGCTTTCTTTTGGGCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCGAACCCGGGGTAAGGTaGTTGCCTTGGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAEPGVR*LPWDPP
Trigger: TGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTC...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTAGTTGCCCTCATTGCTaGCTAAGGGCTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFSCPHC*LRAGEG
Trigger: CCCCTCACCAGCCCTTAGGCAGCAATGAGGGCAACT...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTAGCGTCTTGGGGAGTTaGCCTCATTGCTGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFSVLGS*PHCCLR
Trigger: CCTTAGGCAGCAATGAGGGCAACTCCCCAAGACGCT...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTGTCTCATGCATGTTCTaGGCCACCACGGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFVSCMF*ATTESS
Trigger: GGATGACTCCGTGGTGGCCCAGAACATGCATGAGAC...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCATGCTGGACGGGACATaGTGCCTTCGCCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAMLDGT*CLRHRW
Trigger: CCAGCGATGGCGAAGGCACCATGTCCCGTCCAGCAT...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCGGGGTCCACTCTCTGTaGGTGGCGTCTGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAGVHSL*VASDGV
Trigger: AACCCCATCAGACGCCACCCACAGAGAGTGGACCCC...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCATTCTGAGGGGCTGCTaGTGTTGGAATCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIILRGC*CWNLPL
Trigger: CAGTGGGAGATTCCAACACCAGCAGCCCCTCAGAAT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGGCTCTCCAGGGCGCTaGGTGTGCTTAAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFGSPGR*VCLKDL
Trigger: AAGGTCCTTTAAGCACACCCAGCGCCCTGGAGAGCC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCATGCAAGACATGGTGGTaGGGATGTGTGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLACKTWW*GCVRLD
Trigger: GTCAAGCCTCACACATCCCCACCACCATGTCTTGCA...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCTGCTTAAATCCTCACTaGAGCGTCTTGGGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESCLNPH*SVLGSC
Trigger: GCAACTCCCCAAGACGCTCCAGTGAGGATTTAAGCA...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCACCTTGCGCACGTCTaGGAAGCCATCGGTATCCGG +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFHLAHV*EAIGIR
Trigger: CCGGATACCGATGGCTTCTCAGACGTGCGCAAGGTG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGCCCGATTATGCAGCTaGAGAAGAGCCTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFARLCS*RRAWYQ
Trigger: CTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAGGCAGAGGCGGTAGATaGCAATCAGGTTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEGRGGR*QSGSLS
Trigger: AGACAAAGAACCTGATTGGCATCTACCGCCTCTGCC...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAATCTAGAATGGTCTCATaGATGTTCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: MESLHFQLVLGLCFRPKESRMVS*MFWATT
Trigger: CGTGGTGGCCCAGAACATGCATGAGACCATTCTAGA...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCGGGTTGTTGAGATGGTaGCTGCGCAGGGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFGLLRW*LRRGTL
Trigger: CAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCC...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCGCTCCCAGAAGGGGCTaGGCTGATGCTGCTACTGCT +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFAPRRG*ADAATA
Trigger: AGCAGTAGCAGCATCAGCGCAGCCCCTTCTGGGAGC...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTAGGGAAGACTGCTGCTaGTGTTGCTGCTCTCGAACC +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFREDCC*CCCSRT
Trigger: GGTTCGAGAGCAGCAACAGCAGCAGCAGTCTTCCCT...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTGCACCCTTGAGTGTCTaGGCGAATCACTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLAPLSV*ANHFGT
Trigger: AGTGCCAAAGTGATTCGCGCAGACACTCAAGGGTGC...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTCAACTGGATGAAGACTaGCTTTTGCTGCGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFQLDED*LLLRGR
Trigger: TCGCCCTCGCAGCAAAAGCCAGTCTTCATCCAGTTG...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCATGGGGTTGGAGCAACTaGATGAAGACTGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLAWGWSN*MKTGFC
Trigger: GCAAAAGCCAGTCTTCATCCAGTTGCTCCAACCCCA...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGCGGCTGTGGTTGAGTaGGGGGTGCAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFAAVVE*GVQPGA
Trigger: AGCTCCAGGCTGCACCCCCCACTCAACCACAGCCGC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCGTTAATGATCTGCTGTaGGGCAGATACACTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESVNDLL*GRYTLG
Trigger: CCCAAGAGTGTATCTGCCCCACAGCAGATCATTAAC...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTCCTGGCACCCTCCTCTaGCTCTCCAGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFPGTLL*LSRALG
Trigger: ACCCAGCGCCCTGGAGAGCCAGAGGAGGGTGCCAGG...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp GTCGGTTGCAAATTTGATGAGAGTAAACCCATTCTCTaGGTGGTAGGAAGTGCACCAGCTCTTCGTGACCAG +
Preference number: 4 (lower is better)
Translates to: VGCKFDESKPIL*VVGSAPALRDQ
Trigger: CTGGTCACGAAGAGCTGGTGCACTTCCTACCACCAAGAGAATGGGTTTACTCTCATCAAATTTGCAACCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp GGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTaGATGCTTTCATCAACCCCAGCTCGGGTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GYQQLPVLSQPS*MLSSTPARVKS
Trigger: AGACTTTACCCGAGCTGGGGTTGATGAAAGCATCAAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTGAAGAAGAAGTTCTCTaGGTGGCCACAGCGTCTGAT +
Preference number: 4 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLEEEVL*VATASD
Trigger: ATCAGACGCTGTGGCCACTCAGAGAACTTCTTCTTC...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCGCCATAGTAGCATTCTaGGGGGCTGCTGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAAIVAF*GAAGVG
Trigger: TCCAACACCAGCAGCCCCTCAGAATGCTACTATGGC...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACGCATGTCAGCATAGCTaGCTGGGGCCACTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYACQHS*LGPLVR
Trigger: CCTCACCAGTGGCCCCAGTCAGCTATGCTGACATGC...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTCTGGAGCTGCCTCGATaGCGATGGGCGTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFLELPR*RWAWVL
Trigger: CAGGACCCACGCCCATCGGCATCGAGGCAGCTCCAG...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTTCGCCCAAAAGAAAGCTATCATCATAGCCAAGGGAGCATACCTGTTCTTTTCACAGACTCACTGGGCTaGTGGCTGAAGGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: FRPKESYHHSQGSIPVLFTDSLG*WLKVSI
Trigger: GATGCTCACCTTCAGCCACCAGCCCAGTGAGTCTGT...GAAAAGAACAGGTATGCTCCCTTGGCTATGATGATAGCTTTCTTTTGGGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGAGGTTGGAGGTGTCTaGACGGTGGTGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFEVGGV*TVVAST
Trigger: CGTGGAGGCCACCACCGTCCAGACACCTCCAACCTC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCCCAAGGACAGCCTTGTaGGTCGAGCCAGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFPRTAL*VEPGGC
Trigger: ACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGG...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCATCACTTTGGCACTCTaGTTATGGTTGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIITLAL*LWLGLR
Trigger: CCTCAGTCCCAACCATAACCAGAGTGCCAAAGTGAT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTCTGCGCGAATCACTTTaGCACTCTGGTTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLLRESL*HSGYGW
Trigger: CCAACCATAACCAGAGTGCCAAAGTGATTCGCGCAG...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCCTATTGACGATCCTCTaGCTGCTTCTGGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QRDNIPISWCGHPKCQAILLTIL*LLLEAD
Trigger: ATCAGCTTCCAGAAGCAGCCAGAGGATCGTCAATAG...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCCTCCTCCGGCACCCTTaGGTGTCTGCGCGAATCACT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFLLRHP*VSARIT
Trigger: AGTGATTCGCGCAGACACTCAAGGGTGCCGGAGGAG...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTATGGGGTTAATGATCTaGTGTGGGGCAGATACACTC +
Preference number: 4 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLMGLMI*CGADTL
Trigger: GAGTGTATCTGCCCCACAGCAGATCATTAACCCCAT...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTTCATGTAGTCACCTGTaGAAGGCAAGAGCTTACCGC +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFSCSHL*KARAYR
Trigger: GCGGTAAGCTCTTGCCTTGCACAGGTGACTACATGA...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTTCGCCCAAAAGAAAGCTATCATCATAGCCAAGGGAGCATACCTGTTCTTTTCGCTTATGCATACTCTTaGGCTTGCGCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FRPKESYHHSQGSIPVLFAYAYS*ACAGSP
Trigger: TGGGCTACCTGCGCAAGCCCAAGAGTATGCATAAGC...GAAAAGAACAGGTATGCTCCCTTGGCTATGATGATAGCTTTCTTTTGGGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ACTCAAATCCTTGAGGGCAGAGAGCAAGCGGCTTGCTTTCTTCTTACCTTAGCATCATTGCCTCTAGAATaGTCTCATGCATGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQILEGREQAACFLLTLASLPLE*SHACSG
Trigger: CCCAGAACATGCATGAGACCATTCTAGAGGCAATGA...TGCTAAGGTAAGAAGAAAGCAAGCCGCTTGCTCTCTGCCCTCAAGGATTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTGAAACTCATCGCTCATaGCCCTCATTGCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: QEISAWVPATSSSKSAKFETHRS*PSLPLE
Trigger: TTCTAGAGGCAATGAGGGCCATGAGCGATGAGTTTC...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACTCCCACCTGGCTGGGTaGAGGGTTGTTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYSHLAG*RVVEMV
Trigger: CACCATCTCAACAACCCTCCACCCAGCCAGGTGGGA...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCAAATGTAGTGGCCATTaGGAGCAGCCAAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIAKCSGH*EQPRWR
Trigger: CCTCCACCTTGGCTGCTCCCAATGGCCACTACATTT...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTGGGAGCAACTACCACTaGGTGACATCATCATGTAGC +
Preference number: 4 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFGSNYH*VTSSCS
Trigger: GCTACATGATGATGTCACCCAGTGGTAGTTGCTCCC...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACAGGGGCTGCTGGTGTTaGAATCTCCCACTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYRGCWC*NLPLGT
Trigger: TGTCCCCAGTGGGAGATTCCAACACCAGCAGCCCCT...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACGAGCCAGGCGGCTGTTaGTCTGTGCAGCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYEPGGC*SVQLCL
Trigger: TAGACACAGCTGCACAGACCAACAGCCGCCTGGCTC...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGCAGGTAGCCCACCTTaGGCACGTCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFAGSPP*ARLRSH
Trigger: ATGGCTTCTCAGACGTGCGCAAGGTGGGCTACCTGC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGCATACTCTTGGGCTTaGGCAGGTAGCCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFAYSWA*AGSPPC
Trigger: GCAAGGTGGGCTACCTGCGCAAGCCCAAGAGTATGC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCTGGTACCAGCTGTCTTaGTCAGCCTCGCTATCCGCG +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFWYQLS*SASLSA
Trigger: CGCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCA...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCCAGGCTCGCCTTCTCTaGAGCAATGCCTGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFQARLL*SNACPH
Trigger: ATGCGGACAGGCATTGCTGCAGAGAAGGCGAGCCTG...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCAGAGACAGTCTGAAGTaGAGCCATGGCCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFRDSLK*SHGHWY
Trigger: GTACCAGTGGCCATGGCTCCACTTCAGACTGTCTCT...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCCACCCCAGGAGACATaGGCATATAGCCATCATCAG +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFPPQET*AYSHHQ
Trigger: CTGATGATGGCTATATGCCCATGTCTCCTGGGGTGG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACGGCTGCAAGACATGGTaGTGGGGATGTGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYGCKTW*WGCVRL
Trigger: AAGCCTCACACATCCCCACCACCATGTCTTGCAGCC...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTGGTTGCCCTCCGGCCTaGCCCCAAGTCCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFGCPPA*PQVHVH
Trigger: ATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACC...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCGACAACCTATCTGCATaGTCATGTAGTCACCACGGC +
Preference number: 4 (lower is better)
Translates to: RQRQFTVPEETPSGIVIADNLSA*SCSHHG
Trigger: GCCGTGGTGACTACATGACCATGCAGATAGGTTGTC...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCCTGAGAGCGCTCCTTaGCCAAATCCAGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFPESAP*PNPGLC
Trigger: ACATAGACCTGGATTTGGCCAAGGAGCGCTCTCAGG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp ACACCCACATTCTTCATTCCGAGGAGAGCTTTTGACTaGAAGGGATTGCTCATGTCTCCTTCTCTCTACAGT +
Preference number: 4 (lower is better)
Translates to: TPTFFIPRRAFD*KGLLMSPSLYS
Trigger: ACTGTAGAGAGAAGGAGACATGAGCAATCCCTTCAAGTCAAAAGCTCTCCTCGGAATGAAGAATGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACGTTGGAGCAACTGGATaGAGACTGGCTTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYVGATG*RLAFAA
Trigger: CGCAGCAAAAGCCAGTCTTCATCCAGTTGCTCCAAC...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGACTGGGGCCACTGGTaGGGTATCCACATAGCTTTG +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFDWGHW*GIHIAL
Trigger: CAAAGCTATGTGGATACCTCACCAGTGGCCCCAGTC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCGCTGCTTCTGGAAGCTaGTGCTGGCATAGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFAASGS*CWHSCL
Trigger: TAAGCAACTATGCCAGCATCAGCTTCCAGAAGCAGC...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCCATGCAGATATAATTaGTCAGCTCCTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFPCRYN*SAPPHP
Trigger: GGGGTGAGGAGGAGCTGAGCAATTATATCTGCATGG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACAGCTGCAGAAGAGCCTaGTACCAGCTGTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYSCRRA*YQLSCS
Trigger: TGAGCAAGACAGCTGGTACCAGGCTCTTCTGCAGCT...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCACTCTTGGGGCTCATaGGCATATAGTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFHSWGS*AYSPHF
Trigger: GAAATGGGGACTATATGCCCATGAGCCCCAAGAGTG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp GGTGCGTTAGTCATAAATATTCAAAGCCTAGGCCCCTaGAAAAACTCCAGCCAGCTTTACAGGCAAATGGTT +
Preference number: 4 (lower is better)
Translates to: GALVINIQSLGP*KNSSQLYRQMV
Trigger: AACCATTTGCCTGTAAAGCTGGCTGGAGTTTTTCAAGGGGCCTAGGCTTTGAATATTTATGACTAACGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp GAAGCCACTAGAAGCCCCATTAACATAAGCCCTTGGTaGGCCTGCAAATTCTTGGAAATAGATAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EATRSPINISPW*ACKFLEIDKGQ
Trigger: TTGGCCTTTATCTATTTCCAAGAATTTGCAGGCCAACCAAGGGCTTATGTTAATGGGGCTTCTAGTGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCATCAGGTTCTTTGTCTaGCCCAGGCCCTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFIRFFV*PRPLGF
Trigger: GAAACCCAAGGGCCTGGGTCAGACAAAGAACCTGAT...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCCTCCCTTGCCACCCATaGAGATATAATTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFLPCHP*RYNCSA
Trigger: AGCTGAGCAATTATATCTGCATGGGTGGCAAGGGAG...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCTCCACTCTCTGTGGGTaGCGTCTGATGGGGTTAATG +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFSTLCG*RLMGLM
Trigger: CATTAACCCCATCAGACGCCACCCACAGAGAGTGGA...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp GGTAAGCCATCTTCCCCTATCTTTAAGTCACCCATTTTAAAGGTATCCAAATACATTCACATATTCTCCTaGGCTTTTGGGCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKPSSPIFKSPILKVSKYIHIFS*AFGLGR
Trigger: CCTCCCGAGCCCAAAAGCCCAGGAGAATATGTGAAT...GTATTTGGATACCTTTAAAATGGGTGACTTAAAGATAGGGGAAGATGGCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCAGGTGGAGGCTCCCTTaGCACCCATGCAGATATAAT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFRWRLP*HPCRYN
Trigger: ATTATATCTGCATGGGTGGCAAGGGAGCCTCCACCT...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCTCATCATGTAGCCATTaGGGTCCACTCTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFSSCSH*GPLSVG
Trigger: ACCCACAGAGAGTGGACCCCAATGGCTACATGATGA...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTGGGCAGATACACTCTTaGGGCTCATGGGCATATAGT +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFGQIHS*GSWAYS
Trigger: ACTATATGCCCATGAGCCCCAAGAGTGTATCTGCCC...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CCA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGTTGGAATCTCCCACTaGGGACATGTTCATGTAGTC +
Preference number: 4 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFVGISH*GHVHVV
Trigger: GACTACATGAACATGTCCCCAGTGGGAGATTCCAAC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR TCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTGCAACTACCACTGGGTaGCATCATCATGTAGCCATT +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFATTTG*HHHVAI
Trigger: AATGGCTACATGATGATGTCACCCAGTGGTAGTTGC...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR GCA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTCACATTCTCAAAGGATaGAGAGCTGTGGCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFHILKG*RAVAFY
Trigger: GTAAAACGCCACAGCTCTGCATCCTTTGAGAATGTG...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp ATCTGGAATTTTAATTTCCAGTTAGCAAGAATGCACTaGTCTCTTGAGCCTTCTCGGAGGCAATGTATGAAA +
Preference number: 4 (lower is better)
Translates to: IWNFNFQLARMH*SLEPSRRQCMK
Trigger: TTTCATACATTGCCTCCGAGAAGGCTCAAGAGACAAGTGCATTCTTGCTAACTGGAAATTAAAATTCCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
3UTR CAA 72 bp GTCACCCATTTTAAAGGTATCCAAATACATGGTATATaGCTTTCAGGATGTTCCACTGTATCAAATAGGGTT +
Preference number: 4 (lower is better)
Translates to: VTHFKGIQIHGI*LSGCSTVSNRV
Trigger: AACCCTATTTGATACAGTGGAACATCCTGAAAGCAATATACCATGTATTTGGATACCTTTAAAATGGGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp CTTGAACGCGGGTCCTGGACCCGTGTCATAGCTCAAGTCCTCCCCTaGCTCTCCAACGCCAGAGCTGCCGCTGCAGCTACCGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LERGSWTRVIAQVLP*LSNARAAAAATAAA
Trigger: GGCTGCGGCGGTAGCTGCAGCGGCAGCTCTGGCGTTGGAGAGGCAGGGGAGGACTTGAGCTATGACACGGGTCCAGGACCCGCGTTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp GGCGTGGGTCCTGTTGGTGCTAGGGCTCACAGGACTGCCATCCACTaGTGCTGGACGGGACATGGTGCCTTCGCCATCGCTGGAGGCACG +
Preference number: 5 (lower is better)
Translates to: GVGPVGARAHRTAIH*CWTGHGAFAIAGGT
Trigger: CGTGCCTCCAGCGATGGCGAAGGCACCATGTCCCGTCCAGCATCAGTGGATGGCAGTCCTGTGAGCCCTAGCACCAACAGGACCCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp GGGCTTTTGGGCTCGGGAGGGTGCAGGGAAGACTGCTGCTGCTGTTaGTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTTGGGATCCCCC +
Preference number: 5 (lower is better)
Translates to: GLLGSGGCREDCCCC*CSRTRGKVLALGSP
Trigger: GGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGCAGTCTTCCCTGCACCCTCCCGAGCCCAAAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CTTGTGCCGCCACTTCTTCTCGTTCTCATAATACTCCAGGCGCGCTaGGCCCCCGGCCTCGCTGGCCGCCCGCAGCACGAAAAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LVPPLLLVLIILQAR*APGLAGRPQHEKAL
Trigger: AAGCGCTTTTTCGTGCTGCGGGCGGCCAGCGAGGCCGGGGGCCCAGCGCGCCTGGAGTATTATGAGAACGAGAAGAAGTGGCGGCACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GCTGCTGCTGTTGCTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTTaGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: AAAVAALEPGVRCLP*DPPRTALWVEPGGC
Trigger: ACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TGGGCACGAAGGCGGAATGCCGGTAGCCGGGCAGTCGGCCTCCACTaGCACCTCCTGGTGGGTAGGCAGCGGGCATCATCTCTGTATATT +
Preference number: 5 (lower is better)
Translates to: WARRRNAGSRAVGLH*HLLVGRQRASSLYI
Trigger: AATATACAGAGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTACCGGCATTCCGCCTTCGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CATGGTGCCTTCGCCATCGCTGGAGGCACGCACCCGGAAGGAACCTaGTTTCCCACCCACCATACTGGCAGGGGAGGTGGCAGTGATGCT +
Preference number: 5 (lower is better)
Translates to: HGAFAIAGGTHPEGT*FPTHHTGRGGGSDA
Trigger: AGCATCACTGCCACCTCCCCTGCCAGTATGGTGGGTGGGAAACCAGGTTCCTTCCGGGTGCGTGCCTCCAGCGATGGCGAAGGCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GTTCCAAGTGGTGCATCTCTAGACCCTCTTCGGGATAGGAGTGGGTaGGCACGAAGGCGGAATGCCGGTAGCCGGGCAGTCGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VPSGASLDPLRDRSG*ARRRNAGSRAVGLH
Trigger: GTGGAGGCCGACTGCCCGGCTACCGGCATTCCGCCTTCGTGCCCACCCACTCCTATCCCGAAGAGGGTCTAGAGATGCACCACTTGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp TGGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGTTaGTCTGTGCAGCTGTGTCTACCTTTCGAGGCAGGTGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WDPPRTALWVEPGGC*SVQLCLPFEAGGAA
Trigger: TGCAGCCCCACCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CCCGGGGTAAGGTGCTTGCCTTGGGATCCCCCAAGGACAGCCTTGTaGGTCGAGCCAGGCGGCTGTTGGTCTGTGCAGCTGTGTCTACCT +
Preference number: 5 (lower is better)
Translates to: PGVRCLPWDPPRTAL*VEPGGCWSVQLCLP
Trigger: AGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp CCCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGTTGGTCTGTaGAGCTGTGTCTACCTTTCGAGGCAGGTGGGGCTGCAAGACATG +
Preference number: 5 (lower is better)
Translates to: PQGQPCGSSQAAVGL*SCVYLSRQVGLQDM
Trigger: CATGTCTTGCAGCCCCACCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TGGCACCGAACGGGTTGGCCTGCAAACCGTAGCAGACCCCGGAGGTaGAGGGCCTATTCTGCCCAACTCAACTCCACCACTCTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: WHRTGWPANRSRPRR*RAYSAQLNSTTLLP
Trigger: TGGCAGGAGAGTGGTGGAGTTGAGTTGGGCAGAATAGGCCCTGCACCTCCGGGGTCTGCTACGGTTTGCAGGCCAACCCGTTCGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp TGCCATCCACTGATGCTGGACGGGACATGGTGCCTTCGCCATCGCTaGAGGCACGCACCCGGAAGGAACCTGGTTTCCCACCCACCATAC +
Preference number: 5 (lower is better)
Translates to: CHPLMLDGTWCLRHR*RHAPGRNLVSHPPY
Trigger: GTATGGTGGGTGGGAAACCAGGTTCCTTCCGGGTGCGTGCCTCCAGCGATGGCGAAGGCACCATGTCCCGTCCAGCATCAGTGGATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp AGCCCCTGCTCCAAAGGGCACCGTATTGCCAGCCCGAGTAGGTGCTaGGAAGGTCTCAGAGCTATGCCTCCTCCGGCACCCTTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: SPCSKGHRIASPSRC*EGLRAMPPPAPLSV
Trigger: GACACTCAAGGGTGCCGGAGGAGGCATAGCTCTGAGACCTTCTCAGCACCTACTCGGGCTGGCAATACGGTGCCCTTTGGAGCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp CTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTTGTTGAGATGGTaGCTGCGCAGGGGAACGCTGATGGGGTTGGAGCAACTGGATGAA +
Preference number: 5 (lower is better)
Translates to: LRVSPTWLGGGLLRW*LRRGTLMGLEQLDE
Trigger: TTCATCCAGTTGCTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp GGAGGTGCAGGGCCTATTCTGCCCAACTCAACTCCACCACTCTCCTaGCAGGTTGCCCTCCGGCCTGGCCCCAAGTCCATGTTCATGTAC +
Preference number: 5 (lower is better)
Translates to: GGAGPILPNSTPPLS*QVALRPGPKSMFMY
Trigger: GTACATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGTTGAGTTGGGCAGAATAGGCCCTGCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GATCTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTTGTTGAGATaGTGCCTGCGCAGGGGAACGCTGATGGGGTTGGAGCAACTGGAT +
Preference number: 5 (lower is better)
Translates to: DLRVSPTWLGGGLLR*CLRRGTLMGLEQLD
Trigger: ATCCAGTTGCTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GATGCTCTCAGTTCGAGATCTCCGAGTCAGTCCCACCTGGCTGGGTaGAGGGTTGTTGAGATGGTGCCTGCGCAGGGGAACGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: DALSSRSPSQSHLAG*RVVEMVPAQGNADG
Trigger: CCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATCTCGAACTGAGAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GGCGGAATGCCGGTAGCCGGGCAGTCGGCCTCCACTGCCACCTCCTaGTGGGTAGGCAGCGGGCATCATCTCTGTATATTCCTCAATAGA +
Preference number: 5 (lower is better)
Translates to: GGMPVAGQSASTATS*WVGSGHHLCIFLNR
Trigger: TCTATTGAGGAATATACAGAGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTACCGGCATTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TGTGCCTGCGGAGTGAGTTCTCTTTCGAAACCGGTTATCCAGATCTaGTGCACCCGCGGCTTCATCTCCAGGCAGCGCTGGGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: CACGVSSLSKPVIQI*CTRGFISRQRWACP
Trigger: GGGACAAGCCCAGCGCTGCCTGGAGATGAAGCCGCGGGTGCAGCAGATCTGGATAACCGGTTTCGAAAGAGAACTCACTCCGCAGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CCGTCATGGTGGGCCTTTGCCCGATTATGCAGCTGCAGAAGAGCCTaGTACCAGCTGTCTTGCTCAGCCTCGCTATCCGCGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: PSWWAFARLCSCRRA*YQLSCSASLSAAMA
Trigger: TGCCATTGCCGCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCACCATGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CTTGGGTTTCAGGATAACCTGCCAGACCTCCTTGAACGCGGGTCCTaGACCCGTGTCATAGCTCAAGTCCTCCCCTGCCTCTCCAACGCC +
Preference number: 5 (lower is better)
Translates to: LGFQDNLPDLLERGS*TRVIAQVLPCLSNA
Trigger: GGCGTTGGAGAGGCAGGGGAGGACTTGAGCTATGACACGGGTCCAGGACCCGCGTTCAAGGAGGTCTGGCAGGTTATCCTGAAACCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GGAATGCCGGTAGCCGGGCAGTCGGCCTCCACTGCCACCTCCTGGTaGGTAGGCAGCGGGCATCATCTCTGTATATTCCTCAATAGAAGC +
Preference number: 5 (lower is better)
Translates to: GMPVAGQSASTATSW*VGSGHHLCIFLNRS
Trigger: GCTTCTATTGAGGAATATACAGAGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTACCGGCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GCCCAACTCAACTCCACCACTCTCCTGCCAGGTTGCCCTCCGGCCTaGCCCCAAGTCCATGTTCATGTACTCTTCCGAGCCAGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: AQLNSTTLLPGCPPA*PQVHVHVLFRASLF
Trigger: GAAGAGACTGGCTCGGAAGAGTACATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGTTGAGTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp GCTGCAGCACCACAGCGGCTGCCTCGGAGTTCAGCTTCACAAAGCTaGTGGTCTTGCTGGTCAGGCAGAGGCGGTAGATGCCAATCAGGT +
Preference number: 5 (lower is better)
Translates to: AAAPQRLPRSSASQS*WSCWSGRGGRCQSG
Trigger: ACCTGATTGGCATCTACCGCCTCTGCCTGACCAGCAAGACCATCAGCTTTGTGAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp GCTGCTGGACCCACCTCCAATGTCAGGGGAGCAACTACCACTGGGTaGCATCATCATGTAGCCATTGGGGTCCACTCTCTGTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: AAGPTSNVRGATTTG*HHHVAIGVHSLWVA
Trigger: CGCCACCCACAGAGAGTGGACCCCAATGGCTACATGATGATGTCACCCAGTGGTAGTTGCTCCCCTGACATTGGAGGTGGGTCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp CTCTGGCTCTCCAGGGCGCTGGGTGTGCTTAAAGGACCTTGGCAATaGGTAGTAAGAGAGGACCGGCTTGTGCTGGGGATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LWLSRALGVLKGPWQ*VVREDRLVLGIFWA
Trigger: GGCCCAGAAGATCCCCAGCACAAGCCGGTCCTCTCTTACTACTCATTGCCAAGGTCCTTTAAGCACACCCAGCGCCCTGGAGAGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp AGGGCCTATTCTGCCCAACTCAACTCCACCACTCTCCTGCCAGGTTaGCCTCCGGCCTGGCCCCAAGTCCATGTTCATGTACTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: RAYSAQLNSTTLLPG*PPAWPQVHVHVLFR
Trigger: TCGGAAGAGTACATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGTTGAGTTGGGCAGAATAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CTGCATGGTCATGTAGTCACCACGGCTATTTGGCACCGAACGGGTTaGCCTGCAAACCGTAGCAGACCCCGGAGGTGCAGGGCCTATTCT +
Preference number: 5 (lower is better)
Translates to: LHGHVVTTAIWHRTG*PANRSRPRRCRAYS
Trigger: AGAATAGGCCCTGCACCTCCGGGGTCTGCTACGGTTTGCAGGCCAACCCGTTCGGTGCCAAATAGCCGTGGTGACTACATGACCATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 90 bp GGCTCGCCTTCTCTGCAGCAATGCCTGTCCGCATGTCAGCATAGCTaGCTGGGGCCACTGGTGAGGTATCCACATAGCTTTGACGAGGAC +
Preference number: 5 (lower is better)
Translates to: GSPSLQQCLSACQHS*LGPLVRYPHSFDED
Trigger: GTCCTCGTCAAAGCTATGTGGATACCTCACCAGTGGCCCCAGTCAGCTATGCTGACATGCGGACAGGCATTGCTGCAGAGAAGGCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TACTCCATTTGTCCATGGCTTCCCATAGCTGCTCCCAGAAGGGGCTaGGCTGATGCTGCTACTGCTGCTGGACCCACCTCCAATGTCAGG +
Preference number: 5 (lower is better)
Translates to: YSICPWLPIAAPRRG*ADAATAAGPTSNVR
Trigger: CCTGACATTGGAGGTGGGTCCAGCAGCAGTAGCAGCATCAGCGCAGCCCCTTCTGGGAGCAGCTATGGGAAGCCATGGACAAATGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp ACGAGGACAACCTATCTGCATGGTCATGTAGTCACCACGGCTATTTaGCACCGAACGGGTTGGCCTGCAAACCGTAGCAGACCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: TRTTYLHGHVVTTAI*HRTGWPANRSRPRR
Trigger: CCTCCGGGGTCTGCTACGGTTTGCAGGCCAACCCGTTCGGTGCCAAATAGCCGTGGTGACTACATGACCATGCAGATAGGTTGTCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TTTGCCCGATTATGCAGCTGCAGAAGAGCCTGGTACCAGCTGTCTTaGTCAGCCTCGCTATCCGCGGCAATGGCAAAGTGTTCGTCTCGG +
Preference number: 5 (lower is better)
Translates to: FARLCSCRRAWYQLS*SASLSAAMAKCSSR
Trigger: CCGAGACGAACACTTTGCCATTGCCGCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp GTGGCCACAGCGTCTGATATTCATCAGCTGCAGCACCACAGCGGCTaGCTCGGAGTTCAGCTTCACAAAGCTGATGGTCTTGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: VATASDIHQLQHHSG*LGVQLHKADGLAGQ
Trigger: CTGACCAGCAAGACCATCAGCTTTGTGAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTGCAGCTGATGAATATCAGACGCTGTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GAAGCACTAGAGCGCCTCGGGAAGAGACAGTCTGAAGTGGAGCCATaGCCACTGGTACTACTAGATGACAGACTCACTGGGCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EALERLGKRQSEVEP*PLVLLDDRLTGLVA
Trigger: AGCCACCAGCCCAGTGAGTCTGTCATCTAGTAGTACCAGTGGCCATGGCTCCACTTCAGACTGTCTCTTCCCGAGGCGCTCTAGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CATTTCCTTTGCGGTTGCTGGGCACTGGAGCCACCCCAGGAGACATaGGCATATAGCCATCATCAGTGTGGAGGTTGGAGGTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: HFLCGCWALEPPQET*AYSHHQCGGWRCLD
Trigger: GTCCAGACACCTCCAACCTCCACACTGATGATGGCTATATGCCCATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGCAAAGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp ATAGCCAGGCTGGCCGCTCCCGAATTCAATATTCACATATTCTCCTaGGCTTTTGGGCTCGGGAGGGTGCAGGGAAGACTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IARLAAPEFNIHIFS*AFGLGRVQGRLLLL
Trigger: CAGCAGCAGCAGTCTTCCCTGCACCCTCCCGAGCCCAAAAGCCCAGGAGAATATGTGAATATTGAATTCGGGAGCGGCCAGCCTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp ATGTACTCTTCCGAGCCAGTCTCTTCTCTAGGAGCTGGGTGGAGCTaGGGTGGACATCGAACTGAAGGAGAGCTACGGGAAGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: MYSSEPVSSLGAGWS*GGHRTEGELREVAG
Trigger: CCCTGCAACTTCCCGTAGCTCTCCTTCAGTTCGATGTCCACCCCAGCTCCACCCAGCTCCTAGAGAAGAGACTGGCTCGGAAGAGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp GCTCATGGGCATATAGTCCCCATTTCCTTTGCGGTTGCTGGGCACTaGAGCCACCCCAGGAGACATGGGCATATAGCCATCATCAGTGTG +
Preference number: 5 (lower is better)
Translates to: AHGHIVPISFAVAGH*SHPRRHGHIAIISV
Trigger: CACACTGATGATGGCTATATGCCCATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGCAAAGGAAATGGGGACTATATGCCCATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp TACTGCTGCTGGACCCACCTCCAATGTCAGGGGAGCAACTACCACTaGGTGACATCATCATGTAGCCATTGGGGTCCACTCTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: YCCWTHLQCQGSNYH*VTSSCSHWGPLSVG
Trigger: ACCCACAGAGAGTGGACCCCAATGGCTACATGATGATGTCACCCAGTGGTAGTTGCTCCCCTGACATTGGAGGTGGGTCCAGCAGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCACCTGCCAGACCTCCTaGAACGCGGGTCCTGGACCC +
Preference number: 5 (lower is better)
Translates to: QRDNIPISWCGHPKCQAITCQTS*NAGPGP
Trigger: GGGTCCAGGACCCGCGTTCAAGGAGGTCTGGCAGGT...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCTGGCTGGGTGGAGGGTaGTTGAGATGGTGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESWLGGG*LRWCLR
Trigger: GCGCAGGCACCATCTCAACAACCCTCCACCCAGCCA...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAACCCGGGGTAAGGTGCTaGCCTTGGGATCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEPGVRC*PWDPPR
Trigger: CCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGG...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp ACCCAGACTGTCGCTGCTGGTAGAAGAGGAGGAATCTTCGGCAGTTaGGGTATAGCGAAGGCGTCCAGAGCTAGAAGAGAGACGAAGATG +
Preference number: 5 (lower is better)
Translates to: TQTVAAGRRGGIFGS*GIAKASRARRETKM
Trigger: CATCTTCGTCTCTCTTCTAGCTCTGGACGCCTTCGCTATACCGCAACTGCCGAAGATTCCTCCTCTTCTACCAGCAGCGACAGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAATTGGGGGCGCTCGACTaGTGCCGCCACTTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: MESLHFQLVLGLCFRPKELGALD*CRHFFS
Trigger: CGAGAAGAAGTGGCGGCACAAGTCGAGCGCCCCCAA...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTAGGGGGATCGAGCGTTaGGGGGCGCTCGACTTGTGC +
Preference number: 5 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLRGIER*GALDLC
Trigger: GCACAAGTCGAGCGCCCCCAAACGCTCGATCCCCCT...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCGAGGGGCTGCTGGTGTaGGAATCTCCCACTGGGGAC +
Preference number: 5 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIEGLLV*ESPTGD
Trigger: GTCCCCAGTGGGAGATTCCAACACCAGCAGCCCCTC...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGGGTAAGGTGCTTGCCTaGGGATCCCCCAAGGACAGC +
Preference number: 5 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQGKVLA*GSPKDS
Trigger: GCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACC...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp AAGAAGAAGTTCTCTGAGTGGCCACAGCGTCTGATATTCATCAGCTaGAGCACCACAGCGGCTGCCTCGGAGTTCAGCTTCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: KKKFSEWPQRLIFIS*STTAAASEFSFTKL
Trigger: CAGCTTTGTGAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTGCAGCTGATGAATATCAGACGCTGTGGCCACTCAGAGAACTTCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp CGAAACTCATCGCTCATGGCCCTCATTGCCTCTAGAATGGTCTCATaGATGTTCTGGGCCACCACGGAGTCATCCACTTGCATCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RNSSLMALIASRMVS*MFWATTESSTCIQN
Trigger: GTTCTGGATGCAAGTGGATGACTCCGTGGTGGCCCAGAACATGCATGAGACCATTCTAGAGGCAATGAGGGCCATGAGCGATGAGTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 90 bp TGGTGTTGGAATCTCCCACTGGGGACATGTTCATGTAGTCACCTGTaGAAGGCAAGAGCTTACCGCCACCACTCTCAACAGGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: WCWNLPLGTCSCSHL*KARAYRHHSQQEVW
Trigger: CCAAACCTCCTGTTGAGAGTGGTGGCGGTAAGCTCTTGCCTTGCACAGGTGACTACATGAACATGTCCCCAGTGGGAGATTCCAACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp TGGATGAAGACTGGCTTTTGCTGCGAGGGCGAAACTCATCGCTCATaGCCCTCATTGCCTCTAGAATGGTCTCATGCATGTTCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: WMKTGFCCEGETHRS*PSLPLEWSHACSGP
Trigger: TGGCCCAGAACATGCATGAGACCATTCTAGAGGCAATGAGGGCCATGAGCGATGAGTTTCGCCCTCGCAGCAAAAGCCAGTCTTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 90 bp CTGGTGAGGTATCCACATAGCTTTGACGAGGACAACCTATCTGCATaGTCATGTAGTCACCACGGCTATTTGGCACCGAACGGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LVRYPHSFDEDNLSA*SCSHHGYLAPNGLA
Trigger: GGCCAACCCGTTCGGTGCCAAATAGCCGTGGTGACTACATGACCATGCAGATAGGTTGTCCTCGTCAAAGCTATGTGGATACCTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CAAGAGATTTCAGCCTGGGTACCAGCAACTTCCAGTTCTAAGTCAGCCAAGTTTCGAGCCAGGCGGCTGTaGGTCTGTGCAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: QEISAWVPATSSSKSAKFRARRL*VCAAVS
Trigger: AGACACAGCTGCACAGACCAACAGCCGCCTGGCTCG...AAACTTGGCTGACTTAGAACTGGAAGTTGCTGGTACCCAGGCTGAAATCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp ATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAACCTCACTGGAGCGTCTaGGGGAGTTGCCCTCATTGC +
Preference number: 5 (lower is better)
Translates to: MESLHFQLVLGLCFRPKEPHWSV*GSCPHC
Trigger: GCAATGAGGGCAACTCCCCAAGACGCTCCAGTGAGG...TTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GGATGGCAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCCGCTTGTTGATGTaGAAACAGCTCTCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GWQRDNIPISWCGHPKCQARLLM*KQLSRG
Trigger: CCCCCTCGAGAGCTGTTTCAACATCAACAAGCGGGC...TTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTGCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTCGCCCAAAAGAAAGCACCAGGTGCTTGTTCTaGGAGTCAGCCCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ESLHFQLVLGLCFRPKESTRCLF*ESARLL
Trigger: CAACAAGCGGGCTGACTCCAAGAACAAGCACCTGGT...GCTTTCTTTTGGGCGAAAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTCTGGTACCAGCTGTCTaGCTCAGCCTCGCTATCCGC +
Preference number: 5 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLLVPAV*LSLAIR
Trigger: GCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCAG...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTTGGGCGTGGGTCCTGTaGGTGCTAGGGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFWAWVL*VLGLTG
Trigger: TCCTGTGAGCCCTAGCACCAACAGGACCCACGCCCA...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CGGTTGATCATTAATGGAGTCCCTTCATTTCCAGCTGGTTCTAGGGCTATGCTTTATTCTCCTGGGCTTTaGGGCTCGGGAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RLIINGVPSFPAGSRAMLYSPGL*GSGGCR
Trigger: CCTGCACCCTCCCGAGCCCAAAAGCCCAGGAGAATA...AAGCATAGCCCTAGAACCAGCTGGAAATGAAGGGACTCCATTAATGATCAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTAGAGCCACCAGGTGCTaGTTCTTGGAGTCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFRATRC*FLESAR
Trigger: GCGGGCTGACTCCAAGAACAAGCACCTGGTGGCTCT...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp TTAGCAGCTGATGTGCTTAAAGGAAACCCTTCAAGAAGCCAGCGCAAGAGATTTCACGGAGTCATCCACTaGCATCCAGAACTCGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAADVLKGNPSRSQRKRFHGVIH*HPELAR
Trigger: CCTGGCGAGTTCTGGATGCAAGTGGATGACTCCGTG...AAATCTCTTGCGCTGGCTTCTTGAAGGGTTTCCTTTAAGCACATCAGCTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CAAAGGGATAACATACCCATCTCTTGGTGTGGACATCCCAAATGCCAAGCCATCGATGAAGACTGGCTTTaGCTGCGAGGGCGAAACTCA +
Preference number: 5 (lower is better)
Translates to: QRDNIPISWCGHPKCQAIDEDWL*LRGRNS
Trigger: TGAGTTTCGCCCTCGCAGCAAAAGCCAGTCTTCATC...GATGGCTTGGCATTTGGGATGTCCACACCAAGAGATGGGTATGTTATCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp CCGGTGTCACAGTGCTTTCTTGTTGCTTGGCACAATGTAGAACGTGCAGTTCAGTCTGCGCGAATCACTTaGGCACTCTGGTTATGGTTG +
Preference number: 5 (lower is better)
Translates to: PVSQCFLVAWHNVERAVQSARIT*ALWLWL
Trigger: CAACCATAACCAGAGTGCCAAAGTGATTCGCGCAGA...CTGAACTGCACGTTCTACATTGTGCCAAGCAACAAGAAAGCACTGTGACACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp AGGCAAAGACAATTTACAGTTCCAGAGGAAACACCTTCAGGTATAGTCATTGCCACTGGAGCCGACTCCTaGGAGACTCCCCCTAGATCC +
Preference number: 5 (lower is better)
Translates to: RQRQFTVPEETPSGIVIATGADS*ETPPRS
Trigger: GGATCTAGGGGGAGTCTCCAAGGAGTCGGCTCCAGT...GGCAATGACTATACCTGAAGGTGTTTCCTCTGGAACTGTAAATTGTCTTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCACAAAGCTGATGGTCTaGCTGGTCAGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFTKLMV*LVRQRR
Trigger: CCGCCTCTGCCTGACCAGCAAGACCATCAGCTTTGT...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCTCATCAGTGTGGAGGTaGGAGGTGTCTGGACGGTGG +
Preference number: 5 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFSSVWR*EVSGRW
Trigger: CCACCGTCCAGACACCTCCAACCTCCACACTGATGA...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp GCACTACAGATGAGTATGCAAACAGACACATTTTCCTGGGTAGTGAATTTGTTCTGCCAATCAGGTTCTTaGTCTGACCCAGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: ALQMSMQTDTFSWVVNLFCQSGS*SDPGPW
Trigger: CCAAGGGCCTGGGTCAGACAAAGAACCTGATTGGCA...GAACAAATTCACTACCCAGGAAAATGTGTCTGTTTGCATACTCATCTGTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTCTGGGTGGAGGGTTGTaGAGATGGTGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFLGGGL*RWCLRR
Trigger: CCTGCGCAGGCACCATCTCAACAACCCTCCACCCAG...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCGAGTCAGCCCGCTTGTaGATGTTGAAACAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFESARL*MLKQLS
Trigger: CGAGAGCTGTTTCAACATCAACAAGCGGGCTGACTC...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp ATGTTTCAACAGCAGCTCACTAAGTTTTTATGTGCTCTCTGTAAACTGTGTTTTGCACTCTGGTTATGGTaGGGACTGAGGTTCACCCTG +
Preference number: 5 (lower is better)
Translates to: MFQQQLTKFLCALCKLCFALWLW*GLRFTL
Trigger: CAGGGTGAACCTCAGTCCCAACCATAACCAGAGTGC...AAAACACAGTTTACAGAGAGCACATAAAAACTTAGTGAGCTGCTGTTGAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS-3UTR CAA 90 bp TACAGTATTTACAATGGAAGTCTGTGGTTTCCTCTCTTTGTTATAGTTCGCTTCTTGGAGTCAGCCCGCTaGTTGATGTTGAAACAGCTC +
Preference number: 5 (lower is better)
Translates to: YSIYNGSLWFPLFVIVRFLESAR*LMLKQL
Trigger: GAGCTGTTTCAACATCAACAAGCGGGCTGACTCCAA...GAAGCGAACTATAACAAAGAGAGGAAACCACAGACTTCCATTGTAAATACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp AGGCGGAATGCCGGTAGCCGGGCAGTCGGCCTCCACTaGCACCTCCTGGTGGGTAGGCAGCGGGCATCATCT +
Preference number: 6 (lower is better)
Translates to: RRNAGSRAVGLH*HLLVGRQRASS
Trigger: AGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTACCGGCATTCCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CCACTTCTTCTCGTTCTCATAATACTCCAGGCGCGCTaGGCCCCCGGCCTCGCTGGCCGCCCGCAGCACGAA +
Preference number: 6 (lower is better)
Translates to: PLLLVLIILQAR*APGLAGRPQHE
Trigger: TTCGTGCTGCGGGCGGCCAGCGAGGCCGGGGGCCCAGCGCGCCTGGAGTATTATGAGAACGAGAAGAAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GGGTGCAGCCTGGAGCTGCCTCGATGCCGATGGGCGTaGGTCCTGTTGGTGCTAGGGCTCACAGGACTGCCA +
Preference number: 6 (lower is better)
Translates to: GCSLELPRCRWA*VLLVLGLTGLP
Trigger: TGGCAGTCCTGTGAGCCCTAGCACCAACAGGACCCACGCCCATCGGCATCGAGGCAGCTCCAGGCTGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp GGGTGCAGCCTGGAGCTGCCTCGATGCCGATGGGCGTGGGTCCTGTaGGTGCTAGGGCTCACAGGACTGCCATCCACTGATGCTGGACGG +
Preference number: 6 (lower is better)
Translates to: GCSLELPRCRWAWVL*VLGLTGLPSTDAGR
Trigger: CCGTCCAGCATCAGTGGATGGCAGTCCTGTGAGCCCTAGCACCAACAGGACCCACGCCCATCGGCATCGAGGCAGCTCCAGGCTGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GGGTCCTGGACCCGTGTCATAGCTCAAGTCCTCCCCTaGCTCTCCAACGCCAGAGCTGCCGCTGCAGCTACC +
Preference number: 6 (lower is better)
Translates to: GSWTRVIAQVLP*LSNARAAAAAT
Trigger: GGTAGCTGCAGCGGCAGCTCTGGCGTTGGAGAGGCAGGGGAGGACTTGAGCTATGACACGGGTCCAGGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp CAGGACTGCCATCCACTGATGCTGGACGGGACATGGTaGCTTCGCCATCGCTGGAGGCACGCACCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: QDCHPLMLDGTW*LRHRWRHAPGR
Trigger: CCTTCCGGGTGCGTGCCTCCAGCGATGGCGAAGGCACCATGTCCCGTCCAGCATCAGTGGATGGCAGTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CAGCTACCGCCGCAGCCTCCTCCAGCCCCGTCATGGTaGGCCTTTGCCCGATTATGCAGCTGCAGAAGAGCC +
Preference number: 6 (lower is better)
Translates to: QLPPQPPPAPSW*AFARLCSCRRA
Trigger: GGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCACCATGACGGGGCTGGAGGAGGCTGCGGCGGTAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TTCGCCATCGCTGGAGGCACGCACCCGGAAGGAACCTaGTTTCCCACCCACCATACTGGCAGGGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: FAIAGGTHPEGT*FPTHHTGRGGG
Trigger: GCCACCTCCCCTGCCAGTATGGTGGGTGGGAAACCAGGTTCCTTCCGGGTGCGTGCCTCCAGCGATGGCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CGCCGCAGCCTCCTCCAGCCCCGTCATGGTGGGCCTTaGCCCGATTATGCAGCTGCAGAAGAGCCTGGTACC +
Preference number: 6 (lower is better)
Translates to: RRSLLQPRHGGP*PDYAAAEEPGT
Trigger: GGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCACCATGACGGGGCTGGAGGAGGCTGCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTTGTaGAGATGGTGCCTGCGCAGGGGAACGCTGATGGGG +
Preference number: 6 (lower is better)
Translates to: LRVSPTWLGGGL*RWCLRRGTLMG
Trigger: CCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp TGCTGCTGCTGTTGCTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTaGGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCSRTRGKVLA*GSPKDSLVGRARRL
Trigger: CAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp CAGCCTTGTGGGTCGAGCCAGGCGGCTGTTGGTCTGTaGAGCTGTGTCTACCTTTCGAGGCAGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: QPCGSSQAAVGL*SCVYLSRQVGL
Trigger: CAGCCCCACCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GGCTCGGGAGGGTGCAGGGAAGACTGCTGCTGCTGTTaGTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GSGGCREDCCCC*CSRTRGKVLAL
Trigger: CAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGCAGTCTTCCCTGCACCCTCCCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GTCAGTCCCACCTGGCTGGGTGGAGGGTTGTTGAGATaGTGCCTGCGCAGGGGAACGCTGATGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VSPTWLGGGLLR*CLRRGTLMGLE
Trigger: CTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CTGATGCTGGACGGGACATGGTGCCTTCGCCATCGCTaGAGGCACGCACCCGGAAGGAACCTGGTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LMLDGTWCLRHR*RHAPGRNLVSH
Trigger: GTGGGAAACCAGGTTCCTTCCGGGTGCGTGCCTCCAGCGATGGCGAAGGCACCATGTCCCGTCCAGCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CCGGTAGCCGGGCAGTCGGCCTCCACTGCCACCTCCTaGTGGGTAGGCAGCGGGCATCATCTCTGTATATTC +
Preference number: 6 (lower is better)
Translates to: PVAGQSASTATS*WVGSGHHLCIF
Trigger: GAATATACAGAGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GGTGCATCTCTAGACCCTCTTCGGGATAGGAGTGGGTaGGCACGAAGGCGGAATGCCGGTAGCCGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: GASLDPLRDRSG*ARRRNAGSRAV
Trigger: GACTGCCCGGCTACCGGCATTCCGCCTTCGTGCCCACCCACTCCTATCCCGAAGAGGGTCTAGAGATGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp AGGTGCTTGCCTTGGGATCCCCCAAGGACAGCCTTGTaGGTCGAGCCAGGCGGCTGTTGGTCTGTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RCLPWDPPRTAL*VEPGGCWSVQL
Trigger: CAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp TTGGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGTaGGTCTGTGCAGCTGTGTCTACCTTTCGAGGCAGGTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LGSPKDSLVGRARRL*VCAAVSTFRGRWGC
Trigger: GCAGCCCCACCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp TGCAGCTACCGCCGCAGCCTCCTCCAGCCCCGTCATGGTGGGCCTTaGCCCGATTATGCAGCTGCAGAAGAGCCTGGTACCAGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: CSYRRSLLQPRHGGP*PDYAAAEEPGTSCL
Trigger: AAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCACCATGACGGGGCTGGAGGAGGCTGCGGCGGTAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp GAACCCGGGGTAAGGTGCTTGCCTTGGGATCCCCCAAGGACAGCCTaGTGGGTCGAGCCAGGCGGCTGTTGGTCTGTGCAGCTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: EPGVRCLPWDPPRTA*WVEPGGCWSVQLCL
Trigger: TAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp AAGACTGCTGCTGCTGTTGCTGCTCTCGAACCCGGGGTAAGGTGCTaGCCTTGGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: KTAAAVAALEPGVRC*PWDPPRTALWVEPG
Trigger: GCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGCAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp AGTCCCACCTGGCTGGGTGGAGGGTTGTTGAGATGGTaGCTGCGCAGGGGAACGCTGATGGGGTTGGAGCAA +
Preference number: 6 (lower is better)
Translates to: SPTWLGGGLLRW*LRRGTLMGLEQ
Trigger: TTGCTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GCTGCTGCTGTTGCTGCTCTCGAACCCGGGGTAAGGTaGTTGCCTTGGGATCCCCCAAGGACAGCCTTGTGG +
Preference number: 6 (lower is better)
Translates to: AAAVAALEPGVR*LPWDPPRTALW
Trigger: CCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp ATCTGCTGCACCCGCGGCTTCATCTCCAGGCAGCGCTaGGCTTGTCCCCAAGTTAGCACCTGGGATGTAGCG +
Preference number: 6 (lower is better)
Translates to: ICCTRGFISRQR*ACPQVSTWDVA
Trigger: CGCTACATCCCAGGTGCTAACTTGGGGACAAGCCCAGCGCTGCCTGGAGATGAAGCCGCGGGTGCAGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GTAGCCGGGCAGTCGGCCTCCACTGCCACCTCCTGGTaGGTAGGCAGCGGGCATCATCTCTGTATATTCCTC +
Preference number: 6 (lower is better)
Translates to: VAGQSASTATSW*VGSGHHLCIFL
Trigger: GAGGAATATACAGAGATGATGCCCGCTGCCTACCCACCAGGAGGTGGCAGTGGAGGCCGACTGCCCGGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GTTGCTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTTaGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCCA +
Preference number: 6 (lower is better)
Translates to: VAALEPGVRCLP*DPPRTALWVEP
Trigger: TGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp GATCTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTaGTTGAGATGGTGCCTGCGCAGGGGAACGCTGATG +
Preference number: 6 (lower is better)
Translates to: DLRVSPTWLGGG*LRWCLRRGTLM
Trigger: CATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CTGGAGCTGCCTCGATGCCGATGGGCGTGGGTCCTGTaGGTGCTAGGGCTCACAGGACTGCCATCCACTGAT +
Preference number: 6 (lower is better)
Translates to: LELPRCRWAWVL*VLGLTGLPSTD
Trigger: ATCAGTGGATGGCAGTCCTGTGAGCCCTAGCACCAACAGGACCCACGCCCATCGGCATCGAGGCAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CCCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGTaGGTCTGTGCAGCTGTGTCTACCTTTCGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PKDSLVGRARRL*VCAAVSTFRGR
Trigger: CCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp GTAAGGTGCTTGCCTTGGGATCCCCCAAGGACAGCCTaGTGGGTCGAGCCAGGCGGCTGTTGGTCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: VRCLPWDPPRTA*WVEPGGCWSVQ
Trigger: CTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp TGTTGCTGCTCTCGAACCCGGGGTAAGGTGCTTGCCTaGGGATCCCCCAAGGACAGCCTTGTGGGTCGAGCC +
Preference number: 6 (lower is better)
Translates to: CCCSRTRGKVLA*GSPKDSLVGRA
Trigger: GGCTCGACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp GCTGCTGTTGCTGCTCTCGAACCCGGGGTAAGGTGCTaGCCTTGGGATCCCCCAAGGACAGCCTTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: AAVAALEPGVRC*PWDPPRTALWV
Trigger: GACCCACAAGGCTGTCCTTGGGGGATCCCAAGGCAAGCACCTTACCCCGGGTTCGAGAGCAGCAACAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CCCCCTACTGCAGCCCCTGCTCCAAAGGGCACCGTATaGCCAGCCCGAGTAGGTGCTGAGAAGGTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PPTAAPAPKGTV*PARVGAEKVSE
Trigger: CTCTGAGACCTTCTCAGCACCTACTCGGGCTGGCAATACGGTGCCCTTTGGAGCAGGGGCTGCAGTAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp GTTCGAGATCTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTTGTaGAGATGGTGCCTGCGCAGGGGAACGCTGATGGGGTTGGAGCAA +
Preference number: 6 (lower is better)
Translates to: VRDLRVSPTWLGGGL*RWCLRRGTLMGLEQ
Trigger: TTGCTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATCTCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp TCAGTTCGAGATCTCCGAGTCAGTCCCACCTGGCTGGGTGGAGGGTaGTTGAGATGGTGCCTGCGCAGGGGAACGCTGATGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SVRDLRVSPTWLGGG*LRWCLRRGTLMGLE
Trigger: CTCCAACCCCATCAGCGTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATCTCGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 72 bp CCTGTTGGTGCTAGGGCTCACAGGACTGCCATCCACTaGTGCTGGACGGGACATGGTGCCTTCGCCATCGCT +
Preference number: 6 (lower is better)
Translates to: PVGARAHRTAIH*CWTGHGAFAIA
Trigger: AGCGATGGCGAAGGCACCATGTCCCGTCCAGCATCAGTGGATGGCAGTCCTGTGAGCCCTAGCACCAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp CCTCCAGCCCCGTCATGGTGGGCCTTTGCCCGATTATaGAGCTGCAGAAGAGCCTGGTACCAGCTGTCTTGC +
Preference number: 6 (lower is better)
Translates to: PPAPSWWAFARL*SCRRAWYQLSC
Trigger: GCAAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCACCATGACGGGGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CAGGATAACCTGCCAGACCTCCTTGAACGCGGGTCCTaGACCCGTGTCATAGCTCAAGTCCTCCCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: QDNLPDLLERGS*TRVIAQVLPCL
Trigger: GAGGCAGGGGAGGACTTGAGCTATGACACGGGTCCAGGACCCGCGTTCAAGGAGGTCTGGCAGGTTATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp AGTTCGAGATCTCCGAGTCAGTCCCACCTGGCTGGGTaGAGGGTTGTTGAGATGGTGCCTGCGCAGGGGAAC +
Preference number: 6 (lower is better)
Translates to: SSRSPSQSHLAG*RVVEMVPAQGN
Trigger: GTTCCCCTGCGCAGGCACCATCTCAACAACCCTCCACCCAGCCAGGTGGGACTGACTCGGAGATCTCGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp ACCTTTCGAGGCAGGTGGGGCTGCAAGACATGGTGGTaGGGATGTGTGAGGCTTGACTCTGGCCTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: TFRGRWGCKTWW*GCVRLDSGLAP
Trigger: TGGGGCTAGGCCAGAGTCAAGCCTCACACATCCCCACCACCATGTCTTGCAGCCCCACCTGCCTCGAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CCAAGGACAGCCTTGTGGGTCGAGCCAGGCGGCTGTTaGTCTGTGCAGCTGTGTCTACCTTTCGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: PRTALWVEPGGC*SVQLCLPFEAG
Trigger: ACCTGCCTCGAAAGGTAGACACAGCTGCACAGACCAACAGCCGCCTGGCTCGACCCACAAGGCTGTCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp AACTCCACCACTCTCCTGCCAGGTTGCCCTCCGGCCTaGCCCCAAGTCCATGTTCATGTACTCTTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: NSTTLLPGCPPA*PQVHVHVLFRA
Trigger: GGCTCGGAAGAGTACATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CATGTAGTCACCACGGCTATTTGGCACCGAACGGGTTaGCCTGCAAACCGTAGCAGACCCCGGAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: HVVTTAIWHRTG*PANRSRPRRCR
Trigger: CCTGCACCTCCGGGGTCTGCTACGGTTTGCAGGCCAACCCGTTCGGTGCCAAATAGCCGTGGTGACTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp GCCCCCAGGTCCCTGAGGGCCTCCCAGCAAGGAAGAGTGAGTAGCTaGCTCAGCGGTGGCTCCTTGAGGTGTAACAGAAGAAGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: APRSLRASQQGRVSS*LSGGSLRCNRRRGC
Trigger: ACAGCCTCTTCTTCTGTTACACCTCAAGGAGCCACCGCTGAGCAAGCTACTCACTCTTCCTTGCTGGGAGGCCCTCAGGGACCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 72 bp ATGGCTTCCCATAGCTGCTCCCAGAAGGGGCTGCGCTaGTGCTGCTACTGCTGCTGGACCCACCTCCAATGT +
Preference number: 6 (lower is better)
Translates to: MASHSCSQKGLR*CCYCCWTHLQC
Trigger: ACATTGGAGGTGGGTCCAGCAGCAGTAGCAGCATCAGCGCAGCCCCTTCTGGGAGCAGCTATGGGAAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TATGCATACTCTTGGGCTTGCGCAGGTAGCCCACCTTaGGCACGTCTGAGAAGCCATCGGTATCCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: YAYSWACAGSPP*ARLRSHRYPEG
Trigger: GCCCTCCGGATACCGATGGCTTCTCAGACGTGCGCAAGGTGGGCTACCTGCGCAAGCCCAAGAGTATGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp AGGTGGAGGCTCCCTTGCCACCCATGCAGATATAATTaGTCAGCTCCTCCTCACCCCTGGCTGGTGGGGTGT +
Preference number: 6 (lower is better)
Translates to: RWRLPCHPCRYN*SAPPHPWLVGC
Trigger: ACACCCCACCAGCCAGGGGTGAGGAGGAGCTGAGCAATTATATCTGCATGGGTGGCAAGGGAGCCTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GGCTCATGGGCATATAGTCCCCATTTCCTTTGCGGTTaGTGGGCACTGGAGCCACCCCAGGAGACATGGGCA +
Preference number: 6 (lower is better)
Translates to: GSWAYSPHFLCG*WALEPPQETWA
Trigger: TGCCCATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGCAAAGGAAATGGGGACTATATGCCCATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TCTGCCCAACTCAACTCCACCACTCTCCTGCCAGGTTaGCCTCCGGCCTGGCCCCAAGTCCATGTTCATGTA +
Preference number: 6 (lower is better)
Translates to: SAQLNSTTLLPG*PPAWPQVHVHV
Trigger: TACATGAACATGGACTTGGGGCCAGGCCGGAGGGCAACCTGGCAGGAGAGTGGTGGAGTTGAGTTGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TGGGCCTTTGCCCGATTATGCAGCTGCAGAAGAGCCTaGTACCAGCTGTCTTGCTCAGCCTCGCTATCCGCG +
Preference number: 6 (lower is better)
Translates to: WAFARLCSCRRA*YQLSCSASLSA
Trigger: CGCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAATCGGGCAAAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TGCGGTTGCTGGGCACTGGAGCCACCCCAGGAGACATaGGCATATAGCCATCATCAGTGTGGAGGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: CGCWALEPPQET*AYSHHQCGGWR
Trigger: CCTCCAACCTCCACACTGATGATGGCTATATGCCCATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp GCCTCCCAGCAAGGAAGAGTGAGTAGCTTGCTCAGCGGTGGCTCCTaGAGGTGTAACAGAAGAAGAGGCTGTGGAGGATGGAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: ASQQGRVSSLLSGGS*RCNRRRGCGGWRRS
Trigger: GCTCCTCCTCCATCCTCCACAGCCTCTTCTTCTGTTACACCTCAAGGAGCCACCGCTGAGCAAGCTACTCACTCTTCCTTGCTGGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GGAGTGAGTTCTCTTTCGAAACCGGTTATCCAGATCTaGTGCACCCGCGGCTTCATCTCCAGGCAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: GVSSLSKPVIQI*CTRGFISRQRW
Trigger: CCAGCGCTGCCTGGAGATGAAGCCGCGGGTGCAGCAGATCTGGATAACCGGTTTCGAAAGAGAACTCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp ACCAGCTGTCTTGCTCAGCCTCGCTATCCGCGGCAATaGCAAAGTGTTCGTCTCGGGTGTAGAGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: TSCLAQPRYPRQ*QSVRLGCREPP
Trigger: TGGTGGCTCTCTACACCCGAGACGAACACTTTGCCATTGCCGCGGATAGCGAGGCTGAGCAAGACAGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CCATCATCAGTGTGGAGGTTGGAGGTGTCTGGACGGTaGTGGCCTCCACGACGTTCCAAGTGGTGCATCTCT +
Preference number: 6 (lower is better)
Translates to: PSSVWRLEVSGR*WPPRRSKWCIS
Trigger: AGAGATGCACCACTTGGAACGTCGTGGAGGCCACCACCGTCCAGACACCTCCAACCTCCACACTGATGATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp TTGATGTTGAAACAGCTCTCGAGGGGGATCGAGCGTTaGGGGGCGCTCGACTTGTGCCGCCACTTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: LMLKQLSRGIER*GALDLCRHFFS
Trigger: CGAGAAGAAGTGGCGGCACAAGTCGAGCGCCCCCAAACGCTCGATCCCCCTCGAGAGCTGTTTCAACATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp AGGGGAACGCTGATGGGGTTGGAGCAACTGGATGAAGACTGGCTTTaGCTGCGAGGGCGAAACTCATCGCTCATGGCCCTCATTGCCTCT +
Preference number: 6 (lower is better)
Translates to: RGTLMGLEQLDEDWL*LRGRNSSLMALIAS
Trigger: AGAGGCAATGAGGGCCATGAGCGATGAGTTTCGCCCTCGCAGCAAAAGCCAGTCTTCATCCAGTTGCTCCAACCCCATCAGCGTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 72 bp TCCAGGGCGCTGGGTGTGCTTAAAGGACCTTGGCAATaGGTAGTAAGAGAGGACCGGCTTGTGCTGGGGATC +
Preference number: 6 (lower is better)
Translates to: SRALGVLKGPWQ*VVREDRLVLGI
Trigger: GATCCCCAGCACAAGCCGGTCCTCTCTTACTACTCATTGCCAAGGTCCTTTAAGCACACCCAGCGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TTCTCTGAGTGGCCACAGCGTCTGATATTCATCAGCTaGAGCACCACAGCGGCTGCCTCGGAGTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FSEWPQRLIFIS*STTAAASEFSF
Trigger: GAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTGCAGCTGATGAATATCAGACGCTGTGGCCACTCAGAGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TTCACATATTCTCCTGGGCTTTTGGGCTCGGGAGGGTaGAGGGAAGACTGCTGCTGCTGTTGCTGCTCTCGA +
Preference number: 6 (lower is better)
Translates to: FTYSPGLLGSGG*REDCCCCCCSR
Trigger: TCGAGAGCAGCAACAGCAGCAGCAGTCTTCCCTGCACCCTCCCGAGCCCAAAAGCCCAGGAGAATATGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp CTCAGAGCTATGCCTCCTCCGGCACCCTTGAGTGTCTaGGCGAATCACTTTGGCACTCTGGTTATGGTTGGG +
Preference number: 6 (lower is better)
Translates to: LRAMPPPAPLSV*ANHFGTLVMVG
Trigger: CCCAACCATAACCAGAGTGCCAAAGTGATTCGCGCAGACACTCAAGGGTGCCGGAGGAGGCATAGCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp AGTTGCTTAAATCCTCACTGGAGCGTCTTGGGGAGTTaGCCTCATTGCTGCCTAAGGGCTGGTGAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: SCLNPHWSVLGS*PHCCLRAGEGE
Trigger: CTCCCCCTCACCAGCCCTTAGGCAGCAATGAGGGCAACTCCCCAAGACGCTCCAGTGAGGATTTAAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GAGCGCCTCGGGAAGAGACAGTCTGAAGTGGAGCCATaGCCACTGGTACTACTAGATGACAGACTCACTGGG +
Preference number: 6 (lower is better)
Translates to: ERLGKRQSEVEP*PLVLLDDRLTG
Trigger: CCCAGTGAGTCTGTCATCTAGTAGTACCAGTGGCCATGGCTCCACTTCAGACTGTCTCTTCCCGAGGCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TCATCAGTGTGGAGGTTGGAGGTGTCTGGACGGTGGTaGCCTCCACGACGTTCCAAGTGGTGCATCTCTAGA +
Preference number: 6 (lower is better)
Translates to: SSVWRLEVSGRW*PPRRSKWCISR
Trigger: TCTAGAGATGCACCACTTGGAACGTCGTGGAGGCCACCACCGTCCAGACACCTCCAACCTCCACACTGATGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp GCCACCAGGTGCTTGTTCTTGGAGTCAGCCCGCTTGTaGATGTTGAAACAGCTCTCGAGGGGGATCGAGCGT +
Preference number: 6 (lower is better)
Translates to: ATRCLFLESARL*MLKQLSRGIER
Trigger: ACGCTCGATCCCCCTCGAGAGCTGTTTCAACATCAACAAGCGGGCTGACTCCAAGAACAAGCACCTGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CTGATGGGGTTGGAGCAACTGGATGAAGACTGGCTTTaGCTGCGAGGGCGAAACTCATCGCTCATGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LMGLEQLDEDWL*LRGRNSSLMAL
Trigger: GAGGGCCATGAGCGATGAGTTTCGCCCTCGCAGCAAAAGCCAGTCTTCATCCAGTTGCTCCAACCCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp TCCCTGAGGGCCTCCCAGCAAGGAAGAGTGAGTAGCTaGCTCAGCGGTGGCTCCTTGAGGTGTAACAGAAGA +
Preference number: 6 (lower is better)
Translates to: SLRASQQGRVSS*LSGGSLRCNRR
Trigger: TCTTCTGTTACACCTCAAGGAGCCACCGCTGAGCAAGCTACTCACTCTTCCTTGCTGGGAGGCCCTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 90 bp ACTGGCTTTTGCTGCGAGGGCGAAACTCATCGCTCATGGCCCTCATaGCCTCTAGAATGGTCTCATGCATGTTCTGGGCCACCACGGAGT +
Preference number: 6 (lower is better)
Translates to: TGFCCEGETHRSWPS*PLEWSHACSGPPRS
Trigger: ACTCCGTGGTGGCCCAGAACATGCATGAGACCATTCTAGAGGCAATGAGGGCCATGAGCGATGAGTTTCGCCCTCGCAGCAAAAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 72 bp CCCACCTCCAATGTCAGGGGAGCAACTACCACTGGGTaGCATCATCATGTAGCCATTGGGGTCCACTCTCTG +
Preference number: 6 (lower is better)
Translates to: PTSNVRGATTTG*HHHVAIGVHSL
Trigger: CAGAGAGTGGACCCCAATGGCTACATGATGATGTCACCCAGTGGTAGTTGCTCCCCTGACATTGGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TTATGCAGCTGCAGAAGAGCCTGGTACCAGCTGTCTTaGTCAGCCTCGCTATCCGCGGCAATGGCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: LCSCRRAWYQLS*SASLSAAMAKC
Trigger: ACACTTTGCCATTGCCGCGGATAGCGAGGCTGAGCAAGACAGCTGGTACCAGGCTCTTCTGCAGCTGCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp TCGCTCATGGCCCTCATTGCCTCTAGAATGGTCTCATaGATGTTCTGGGCCACCACGGAGTCATCCACTTGC +
Preference number: 6 (lower is better)
Translates to: SLMALIASRMVS*MFWATTESSTC
Trigger: GCAAGTGGATGACTCCGTGGTGGCCCAGAACATGCATGAGACCATTCTAGAGGCAATGAGGGCCATGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GTCGCTGCTGGTAGAAGAGGAGGAATCTTCGGCAGTTaGGGTATAGCGAAGGCGTCCAGAGCTAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: VAAGRRGGIFGS*GIAKASRARRE
Trigger: CTCTCTTCTAGCTCTGGACGCCTTCGCTATACCGCAACTGCCGAAGATTCCTCCTCTTCTACCAGCAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GGAACGCTGATGGGGTTGGAGCAACTGGATGAAGACTaGCTTTTGCTGCGAGGGCGAAACTCATCGCTCATG +
Preference number: 6 (lower is better)
Translates to: GTLMGLEQLDED*LLLRGRNSSLM
Trigger: CATGAGCGATGAGTTTCGCCCTCGCAGCAAAAGCCAGTCTTCATCCAGTTGCTCCAACCCCATCAGCGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TCATGGGCATATAGTCCCCATTTCCTTTGCGGTTGCTaGGCACTGGAGCCACCCCAGGAGACATGGGCATAT +
Preference number: 6 (lower is better)
Translates to: SWAYSPHFLCGC*ALEPPQETWAY
Trigger: ATATGCCCATGTCTCCTGGGGTGGCTCCAGTGCCCAGCAACCGCAAAGGAAATGGGGACTATATGCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TGGACCCACCTCCAATGTCAGGGGAGCAACTACCACTaGGTGACATCATCATGTAGCCATTGGGGTCCACTC +
Preference number: 6 (lower is better)
Translates to: WTHLQCQGSNYH*VTSSCSHWGPL
Trigger: GAGTGGACCCCAATGGCTACATGATGATGTCACCCAGTGGTAGTTGCTCCCCTGACATTGGAGGTGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp CTGGCCGCTCCCGAATTCAATATTCACATATTCTCCTaGGCTTTTGGGCTCGGGAGGGTGCAGGGAAGACTG +
Preference number: 6 (lower is better)
Translates to: LAAPEFNIHIFS*AFGLGRVQGRL
Trigger: CAGTCTTCCCTGCACCCTCCCGAGCCCAAAAGCCCAGGAGAATATGTGAATATTGAATTCGGGAGCGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GGTCTCAGCCACACATTCTCAAAGGATGCAGAGCTGTaGCGTTTTACATCCTCACTGCCGCCACCACCACCA +
Preference number: 6 (lower is better)
Translates to: GLSHTFSKDAEL*RFTSSLPPPPP
Trigger: TGGTGGTGGTGGCGGCAGTGAGGATGTAAAACGCCACAGCTCTGCATCCTTTGAGAATGTGTGGCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp AGAGCCACCAGGTGCTTGTTCTTGGAGTCAGCCCGCTaGTTGATGTTGAAACAGCTCTCGAGGGGGATCGAG +
Preference number: 6 (lower is better)
Translates to: RATRCLFLESAR*LMLKQLSRGIE
Trigger: CTCGATCCCCCTCGAGAGCTGTTTCAACATCAACAAGCGGGCTGACTCCAAGAACAAGCACCTGGTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp TGCTGCGAGGGCGAAACTCATCGCTCATGGCCCTCATaGCCTCTAGAATGGTCTCATGCATGTTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: CCEGETHRSWPS*PLEWSHACSGP
Trigger: TGGCCCAGAACATGCATGAGACCATTCTAGAGGCAATGAGGGCCATGAGCGATGAGTTTCGCCCTCGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp GCGTCTGATATTCATCAGCTGCAGCACCACAGCGGCTaGCTCGGAGTTCAGCTTCACAAAGCTGATGGTCTT +
Preference number: 6 (lower is better)
Translates to: ASDIHQLQHHSG*LGVQLHKADGL
Trigger: AAGACCATCAGCTTTGTGAAGCTGAACTCCGAGGCAGCCGCTGTGGTGCTGCAGCTGATGAATATCAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp ACCTATCTGCATGGTCATGTAGTCACCACGGCTATTTaGCACCGAACGGGTTGGCCTGCAAACCGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: TYLHGHVVTTAI*HRTGWPANRSR
Trigger: TCTGCTACGGTTTGCAGGCCAACCCGTTCGGTGCCAAATAGCCGTGGTGACTACATGACCATGCAGATAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp CAAGGAAGAGTGAGTAGCTTGCTCAGCGGTGGCTCCTaGAGGTGTAACAGAAGAAGAGGCTGTGGAGGATGG +
Preference number: 6 (lower is better)
Translates to: QGRVSSLLSGGS*RCNRRRGCGGW
Trigger: CCATCCTCCACAGCCTCTTCTTCTGTTACACCTCAAGGAGCCACCGCTGAGCAAGCTACTCACTCTTCCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp TGCTGGCATAGTTGCTTAAATCCTCACTGGAGCGTCTaGGGGAGTTGCCCTCATTGCTGCCTAAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: CWHSCLNPHWSV*GSCPHCCLRAG
Trigger: ACCAGCCCTTAGGCAGCAATGAGGGCAACTCCCCAAGACGCTCCAGTGAGGATTTAAGCAACTATGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS TCA 72 bp TGTCCGCATGTCAGCATAGCTGACTGGGGCCACTGGTaGGGTATCCACATAGCTTTGACGAGGACAACCTAT +
Preference number: 6 (lower is better)
Translates to: CPHVSIADWGHW*GIHIALTRTTY
Trigger: ATAGGTTGTCCTCGTCAAAGCTATGTGGATACCTCACCAGTGGCCCCAGTCAGCTATGCTGACATGCGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS GCA 72 bp AATCTCCCACTGGGGACATGTTCATGTAGTCACCTGTaGAAGGCAAGAGCTTACCGCCACCACTCTCAACAG +
Preference number: 6 (lower is better)
Translates to: NLPLGTCSCSHL*KARAYRHHSQQ
Trigger: CTGTTGAGAGTGGTGGCGGTAAGCTCTTGCCTTGCACAGGTGACTACATGAACATGTCCCCAGTGGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp GATCTTCTGGGCCATAGTAGCATTCTGAGGGGCTGCTaGTGTTGGAATCTCCCACTGGGGACATGTTCATGT +
Preference number: 6 (lower is better)
Translates to: DLLGHSSILRGC*CWNLPLGTCSC
Trigger: ACATGAACATGTCCCCAGTGGGAGATTCCAACACCAGCAGCCCCTCAGAATGCTACTATGGCCCAGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CAA 72 bp GTGTCTGCGCGAATCACTTTGGCACTCTGGTTATGGTaGGGACTGAGGTTCACCCTGGTGAATGCACTCATG +
Preference number: 6 (lower is better)
Translates to: VSARITLALWLW*GLRFTLVNALM
Trigger: CATGAGTGCATTCACCAGGGTGAACCTCAGTCCCAACCATAACCAGAGTGCCAAAGTGATTCGCGCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3
CDS CCA 72 bp TATCCACATAGCTTTGACGAGGACAACCTATCTGCATaGTCATGTAGTCACCACGGCTATTTGGCACCGAAC +
Preference number: 6 (lower is better)
Translates to: YPHSFDEDNLSA*SCSHHGYLAPN
Trigger: GTTCGGTGCCAAATAGCCGTGGTGACTACATGACCATGCAGATAGGTTGTCCTCGTCAAAGCTATGTGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069799.3