Pregenerated sensors for IRGQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041037Ensembl transcript IDs: ENSMUST00000049020.9
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGAGTTCCTGCGCCCAGGCTCTTTCAGACCCGAGGTGCCTCATaGGAGCACCCTGCTGGCAGCAGGTGGCCTGTGACGAGGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: PRVPAPRLFQTRGAS*EHPAGSRWPVTRET Trigger: AGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGGCACCTCGGGTCTGAAAGAGCCTGGGCGCAGGAACTCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | CCCGAGGTGCCTCATGGGAGCACCCTGCTGGCAGCAGGTGGCCTGTaGCGAGGGAGACTGAACCTTTCCTATTTGGAGGCTTCCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: PEVPHGSTLLAAGGL*RGRLNLSYLEASRG Trigger: GCCCCTGGAAGCCTCCAAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGGCACCTCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | ATGGGAGCACCCTGCTGGCAGCAGGTGGCCTGTGACGAGGGAGACTaGACCTTTCCTATTTGGAGGCTTCCAGGGGCCTGGCTATCTGCT | + |
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Preference number: 1 (lower is better) Translates to: MGAPCWQQVACDEGD*TFPIWRLPGAWLSA Trigger: AGCAGATAGCCAGGCCCCTGGAAGCCTCCAAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR GCA 90 bp | GTGGCACCAAAGCAAGCCACAGTGAGAGCAGGGCATCATGCCACGTaGCTGACCCTGGCACTGGAGAGATGCAGGCAGGAGGATCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VAPKQATVRAGHHAT*LTLALERCRQEDQD Trigger: ATCCTGATCCTCCTGCCTGCATCTCTCCAGTGCCAGGGTCAGGCACGTGGCATGATGCCCTGCTCTCACTGTGGCTTGCTTTGGTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | AGGCAGGGCCAGGCCACACACTGTCCCGCTGTGTTGATGAGCCTTTaGCCTGCATCTCTGAACCCCGTGGTCCTACCTGCACAAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: RQGQATHCPAVLMSL*PASLNPVVLPAQSY Trigger: GTAGCTTTGTGCAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTGGCCTGGCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR GCA 90 bp | GTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCCAGAGTTCCTaGGCCCAGGCTCTTTCAGACCCGAGGTGCCTCATGGGAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: VAAIPAWRTDISQSS*AQALSDPRCLMGAP Trigger: GGGTGCTCCCATGAGGCACCTCGGGTCTGAAAGAGCCTGGGCGCAGGAACTCTGGGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | TTTCAGACCCGAGGTGCCTCATGGGAGCACCCTGCTGGCAGCAGGTaGCCTGTGACGAGGGAGACTGAACCTTTCCTATTTGGAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: FQTRGASWEHPAGSR*PVTRETEPFLFGGF Trigger: GAAGCCTCCAAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGGCACCTCGGGTCTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | ACCCCGTGGTCCTACCTGCACAAAGCTACAAAACTGACAGCGATGTaGTTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: TPWSYLHKATKLTAM*FLPMPPSRHFPTAS Trigger: TGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAACCACATCGCTGTCAGTTTTGTAGCTTTGTGCAGGTAGGACCACGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | GGACACACACAATGGCTACAATATGCTCCTTCGATGCATCTAGCATaGGCCTCCTGCCTCAAGAAGGGAGAGCAGCAAAGCACAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: GHTQWLQYAPSMHLA*ASCLKKGEQQSTGR Trigger: CCGTCCTGTGCTTTGCTGCTCTCCCTTCTTGAGGCAGGAGGCCCATGCTAGATGCATCGAAGGAGCATATTGTAGCCATTGTGTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | TGCATCTCTGAACCCCGTGGTCCTACCTGCACAAAGCTACAAAACTaGCAGCGATGTGGTTTCTGCCTATGCCTCCCTCCAGGCACTTTC | + |
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Preference number: 1 (lower is better) Translates to: CISEPRGPTCTKLQN*QRCGFCLCLPPGTF Trigger: GAAAGTGCCTGGAGGGAGGCATAGGCAGAAACCACATCGCTGTCAGTTTTGTAGCTTTGTGCAGGTAGGACCACGGGGTTCAGAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR GCA 90 bp | CCGAAGACTGCCTTAAATTTCAAATTCTCCTGTGTCAACCGGAGGTaGGGGGATTACAGGCATGAACGCCCGAATAAGGTGCCTCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: PKTALNFKFSCVNRR*GDYRHERPNKVPPR Trigger: ACGAGGAGGCACCTTATTCGGGCGTTCATGCCTGTAATCCCCGCACCTCCGGTTGACACAGGAGAATTTGAAATTTAAGGCAGTCTTCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | ACACACACACACACACACACACACACACAGCAGCAGCATCCTATGTaGACCAGCAGCAGGTGTCTTGGGAGAAATCAGAAGAGGTCATGC | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTQQQHPM*TSSRCLGRNQKRSC Trigger: GCATGACCTCTTCTGATTTCTCCCAAGACACCTGCTGCTGGTCCACATAGGATGCTGCTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR GCA 90 bp | GAAGCTCCCATTTCTACTGAGTCCCAGGCCCTCAACTCCCTTTACTaGATTGGTATCTGGATGACACACTTCTGGCGCATAGACCCTACT | + |
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Preference number: 1 (lower is better) Translates to: EAPISTESQALNSLY*IGIWMTHFWRIDPT Trigger: AGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGGGAGTTGAGGGCCTGGGACTCAGTAGAAATGGGAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | TCTACTGAGTCCCAGGCCCTCAACTCCCTTTACTGCATTGGTATCTaGATGACACACTTCTGGCGCATAGACCCTACTCCCATTCAGTAC | + |
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Preference number: 1 (lower is better) Translates to: STESQALNSLYCIGI*MTHFWRIDPTPIQY Trigger: GTACTGAATGGGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGGGAGTTGAGGGCCTGGGACTCAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | TTCACTACAGGGACTACCATGTGGCAGGATCAATGCAAGCTACTTTaGGTGACCATAGAGCCATTTCGGGGAGACCTGACAGATGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: FTTGTTMWQDQCKLL*VTIEPFRGDLTDED Trigger: GTCCTCATCTGTCAGGTCTCCCCGAAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCTGTAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | GTCTTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATaGAGGACTGACATTTCCCAGAGTTCCTGCGCCCAGGCTCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: VFQGQCQDCVAAIPA*RTDISQSSCAQALS Trigger: TGAAAGAGCCTGGGCGCAGGAACTCTGGGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | ACAGCAGGAGCCCATCACTTTGAGGCCCTGCAGTTAAGGTCCATATaGCAGAAGAAACCAGTAATAAAGAGAAACAGGAGCGTGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: TAGAHHFEALQLRSI*QKKPVIKRNRSVHA Trigger: GGCATGCACGCTCCTGTTTCTCTTTATTACTGGTTTCTTCTGTCATATGGACCTTAACTGCAGGGCCTCAAAGTGATGGGCTCCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR GCA 90 bp | TTGGTAGTAATGTTCACTACAGGGACTACCATGTGGCAGGATCAATaGAAGCTACTTTGGGTGACCATAGAGCCATTTCGGGGAGACCTG | + |
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Preference number: 1 (lower is better) Translates to: LVVMFTTGTTMWQDQ*KLLWVTIEPFRGDL Trigger: CAGGTCTCCCCGAAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCTGTAGTGAACATTACTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | TGTGGATCATTATCGTCCACACCAAAGCTTTGGAGAGCAAATGACTaGCAATCTTCTGCACTCCAAGAGACTAAAGGGTCTCCAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: CGSLSSTPKLWRAND*QSSALQETKGSPAG Trigger: GCCTGCTGGAGACCCTTTAGTCTCTTGGAGTGCAGAAGATTGTCAGTCATTTGCTCTCCAAAGCTTTGGTGTGGACGATAATGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | CCAAGAGAAAGACAAGCAAGGAGCAAGAGCCAACGAACAGGCAAGTaGGAGAATGAGAATACAGCCATTGGTAGTAATGTTCACTACAGG | + |
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Preference number: 1 (lower is better) Translates to: PRERQARSKSQRTGK*ENENTAIGSNVHYR Trigger: CCTGTAGTGAACATTACTACCAATGGCTGTATTCTCATTCTCTCACTTGCCTGTTCGTTGGCTCTTGCTCCTTGCTTGTCTTTCTCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CCA 90 bp | AGAATACAGCCATTGGTAGTAATGTTCACTACAGGGACTACCATGTaGCAGGATCAATGCAAGCTACTTTGGGTGACCATAGAGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: RIQPLVVMFTTGTTM*QDQCKLLWVTIEPF Trigger: AAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCTGTAGTGAACATTACTACCAATGGCTGTATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR TCA 90 bp | AAGGAATCACAAAACACAAAAGTGCCCTGTACAAGTTTATGGAGCTaGCCAGGACACACACAATGGCTACAATATGCTCCTTCGATGCAT | + |
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Preference number: 1 (lower is better) Translates to: KESQNTKVPCTSLWS*PGHTQWLQYAPSMH Trigger: ATGCATCGAAGGAGCATATTGTAGCCATTGTGTGTGTCCTGGTCAGCTCCATAAACTTGTACAGGGCACTTTTGTGTTTTGTGATTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CAA 90 bp | GAGGCAGGGCCAGGCCACACACTGTCCCGCTGTGTTGATGAGCCTTaGGCCTGCATCTCTGAACCCCGTGGTCCTACCTGCACAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: EAGPGHTLSRCVDEP*ACISEPRGPTCTKL Trigger: TAGCTTTGTGCAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTGGCCTGGCCCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CAA 90 bp | AAAATGGAGAAGAGGCAGGGCCAGGCCACACACTGTCCCGCTGTGTaGATGAGCCTTTGGCCTGCATCTCTGAACCCCGTGGTCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: KMEKRQGQATHCPAV*MSLWPASLNPVVLP Trigger: AGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTGGCCTGGCCCTGCCTCTTCTCCATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGAACCCTACCTGCAGCCCAGCACAGGGCTAGGTACATGGTTCCAGCAGAGTTCAGGGTTAGATaGGAGCAAAGCCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPRTLPAAQHRARYMVPAEFRVR*EQSPAV Trigger: CACAGCTGGGCTTTGCTCCCATCTAACCCTGAACTC...TGCTGGAACCATGTACCTAGCCCTGTGCTGGGCTGCAGGTAGGGTTCTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGAACCCTACCTGCAGCCCAGCACAGGGCTAGGTACATGGTTCCAGCACAGCAGCAGGTGTCTTaGGAGAAATCAGAAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LPRTLPAAQHRARYMVPAQQQVS*EKSEEV Trigger: GACCTCTTCTGATTTCTCCCAAGACACCTGCTGCTG...TGCTGGAACCATGTACCTAGCCCTGTGCTGGGCTGCAGGTAGGGTTCTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTAAGGAGCCCATCACTTTaGGGCCCTGCAGTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FLPMPPSRHFPTASKAYLRSPSL*GPAVKV Trigger: GACCTTAACTGCAGGGCCTCAAAGTGATGGGCTCCT...TAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAGAACCCTACCTGCAGCCCAGCACAGGGCTAGGTACATGGTTCCAGCAATGTGGCAGGATCAATaGAAGCTACTTTGGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LPRTLPAAQHRARYMVPAMWQDQ*KLLWVT Trigger: GGTCACCCAAAGTAGCTTGCATTGATCCTGCCACAT...TGCTGGAACCATGTACCTAGCCCTGTGCTGGGCTGCAGGTAGGGTTCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCATGGGAGCACCCTGCTaGCAGCAGGTGGCCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISMGAPC*QQVACD Trigger: GTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCAT...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CAA 90 bp | CATGGAGGGTTTAGAGAGCTCAGGACACTTAATAGGAGACCGAGTTaGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGGGCCCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HGGFRELRTLNRRPS*AVTVARPREVGPRQ Trigger: CTGCCTGGGCCCCACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCTAAACCCTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | ACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGGGACCCCCTACACACACACAGCTTTGGAGAGCAAATaGCTGACAATCTTCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: TASKAYLAILRGTPYTHTALESK*LTIFCT Trigger: AGTGCAGAAGATTGTCAGTCATTTGCTCTCCAAAGC...TGTGTGTGTGTAGGGGGTCCCCCTCAGGATAGCTAGGTAGGCCTTTGATGCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGATTTGGCCTGCATCTCTaGACCCCGTGGTCCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: RELRTLNRRPSLAVTVARFGLHL*TPWSYL Trigger: CAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAA...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAGAACCCTACCTGCAGCCCAGCACAGGGCTAGGTACATGGTTCCAGCATTTGTAACAAGATTATaGCAACCTGAATTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPRTLPAAQHRARYMVPAFVTRL*QPEFQA Trigger: GGCCTGGAATTCAGGTTGTCATAATCTTGTTACAAA...TGCTGGAACCATGTACCTAGCCCTGTGCTGGGCTGCAGGTAGGGTTCTGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACCTAGCATGGGCCTCCTaGCTCAAGAAGGGAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDLAWAS*LKKGEQ Trigger: CTGCTCTCCCTTCTTGAGGCAGGAGGCCCATGCTAG...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTAATACTTCTTTCCTTTTaGGAGCCAGCACTCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: FLPMPPSRHFPTASKAYLILLSF*EPALQG Trigger: GCCTTGGAGTGCTGGCTCCCAAAAGGAAAGAAGTAT...TAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACCCTGAGGTGGGACCTTaGCATCAGGCTTGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDPEVGP*HQACWR Trigger: TCTCCAGCAAGCCTGATGCCAAGGTCCCACCTCAGG...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCTTGCTGGAGATGGGCTaGAAATGGAGAAGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISLLEMG*KWRRGR Trigger: CCTGCCTCTTCTCCATTTTCAGCCCATCTCCAGCAA...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCAGCTGTGCAGGCTTCTaGTTAGCCCTCAGAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISSCAGF*LALRSS Trigger: AGAGCTTCTGAGGGCTAATCAGAAGCCTGCACAGCT...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCCTCCACAGGGCTTCCTaGCACCTAAGAAATGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISLHRAS*HLRNGN Trigger: GTTGCCATTTCTTAGGTGGCAGGAAGCCCTGTGGAG...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGATGAGCCTTTGGCCTaGATCTCTGAACCCCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVDEPLA*ISEPRG Trigger: ACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATC...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGCGCTCTCCCACCAGGTaGTTGCTTCTCTCCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVRSPTR*LLLSLF Trigger: AAAGAGGGAGAGAAGCAAGCACCTGGTGGGAGAGCG...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR GCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCACCATCACCAGCTACATaGCGAGGTGAAGGCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ITRQICPPHSNRQLLHEPPSPAT*RGEGKP Trigger: AGGCTTGCCTTCACCTCGGCATGTAGCTGGTGATGG...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR CAA 90 bp | CACACACACAGCAGCAGCATCCTATGTGGACCAGCAGCAGGTGTCTaGGGAGAAATCAGAAGAGGTCATGCAGAAAAACCACATAGACTG | + |
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Preference number: 2 (lower is better) Translates to: HTHSSSILCGPAAGV*GEIRRGHAEKPHRL Trigger: CAGTCTATGTGGTTTTTCTGCATGACCTCTTCTGATTTCTCCCAAGACACCTGCTGCTGGTCCACATAGGATGCTGCTGCTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR CCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGTGGATGACACACTTCTaGCGCATAGACCCTACTCCC | + |
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Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVWMTHF*RIDPTP Trigger: GGGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCA...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACTTTTCCTAAGGCTCTCACAGCTCCCACAAAAATCTGTTCTTTCATCAGGAGCTCCCATTTCTACTaGGTCCCAGGCCCTCAACTC | + |
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Preference number: 2 (lower is better) Translates to: QTFPKALTAPTKICSFIRSSHFY*VPGPQL Trigger: GAGTTGAGGGCCTGGGACTCAGTAGAAATGGGAGCT...CCTGATGAAAGAACAGATTTTTGTGGGAGCTGTGAGAGCCTTAGGAAAAGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCACAAGTTTATGGAGCTaGCCAGGACACACACAATGG | + |
|
Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISTSLWS*PGHTQW Trigger: CCATTGTGTGTGTCCTGGTCAGCTCCATAAACTTGT...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCTTGGCATCAGGCTTaGTGGAGATGGGCTGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RELRTLNRRPSLAVTVARPWHQA*WRWAEN Trigger: ATTTTCAGCCCATCTCCAGCAAGCCTGATGCCAAGG...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATGCCAGTGTGTGCATaGTTAGCCACACATGTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDMPVCA*LATHVH Trigger: GTGCACATGTGTGGCTAAGCATGCACACACTGGCAT...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAACTACTAAGCCAGGAGGTGAGGCAGGCCTGTGATCCCAGTTACTTGGGACAATGCAAGCTACTTTaGGTGACCATAGAGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: GKLLSQEVRQACDPSYLGQCKLL*VTIEPF Trigger: AAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTG...TCCCAAGTAACTGGGATCACAGGCCTGCCTCACCTCCTGGCTTAGTAGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACCTGTCTGGAATAAAGTaGGTTCAAGGACAGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDLSGIK*VQGQPK Trigger: CTTGGGCTGTCCTTGAACTCACTTTATTCCAGACAG...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCCCTGGCTATCTGCTTTaGTTACATTCTGGAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GQCQDCVAAIPAWRTDISPGYLL*LHSGKA Trigger: GGCTTTTCCAGAATGTAAGCAAAGCAGATAGCCAGG...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACTATGATCCAAGTATGTaGATAAAGCCACCGAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDYDPSM*IKPPRG Trigger: CCCCCTCGGTGGCTTTATCCACATACTTGGATCATA...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 90 bp | GCAAGAGCCAACGAACAGGCAAGTGAGAGAATGAGAATACAGCCATaGGTAGTAATGTTCACTACAGGGACTACCATGTGGCAGGATCAA | + |
|
Preference number: 2 (lower is better) Translates to: ARANEQASERMRIQP*VVMFTTGTTMWQDQ Trigger: TTGATCCTGCCACATGGTAGTCCCTGTAGTGAACATTACTACCAATGGCTGTATTCTCATTCTCTCACTTGCCTGTTCGTTGGCTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGACAAAGCTACAAAACTaGCAGCGATGTGGTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVTKLQN*QRCGFC Trigger: GCAGAAACCACATCGCTGTCAGTTTTGTAGCTTTGT...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR GCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGAAAAACCACATAGACTaGTACAGCAGGAGCCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVKNHID*YSRSPS Trigger: TGATGGGCTCCTGCTGTAGCAGTCTATGTGGTTTTT...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGAATAGCGCTGTGGTCCTaGGGTGAAACAAAGATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RELRTLNRRPSLAVTVARIALWS*GETKIS Trigger: AGAAATCTTTGTTTCACCCCAGGACCACAGCGCTAT...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACTTTGCCTTTAATATGTaGGGCACTGATCAAAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDFAFNM*GTDQNP Trigger: GGGGTTTTGATCAGTGCCTCACATATTAAAGGCAAA...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGATTCTATTTGTACTTaGCCCACTGGAACATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLNRRPSLAVTVARPREVDSICT*PTGTSQ Trigger: CTGTGATGTTCCAGTGGGTCAAGTACAAATAGAATC...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTTTTCCTAAGGCTCTCACAGCTCCCACAAAAATCTGTTCTTTCATCAGGTACTGCATTGGTATCTaGATGACACACTTCTGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: QTFPKALTAPTKICSFIRYCIGI*MTHFWR Trigger: GCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTA...CCTGATGAAAGAACAGATTTTTGTGGGAGCTGTGAGAGCCTTAGGAAAAGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 90 bp | CACAAAAATCTGTTCTTTCATCAGGTAACTTATACTTCTTTCCTTTaGGGAGCCAGCACTCCAAGGCTTCTATCTCCCCGCAGTTTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: HKNLFFHQVTYTSFL*GASTPRLLSPRSFA Trigger: AGCGAAACTGCGGGGAGATAGAAGCCTTGGAGTGCTGGCTCCCAAAAGGAAAGAAGTATAAGTTACCTGATGAAAGAACAGATTTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCTCAGCTTCCCAAATGTGGTTGCAATGTCTCACTTTCATGCTGTTATGATGGATGGTGTCAGAGGTaGGAGTTCAGGGTTAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: ISQLPKCGCNVSLSCCYDGWCQR*EFRVRW Trigger: CCATCTAACCCTGAACTCTCACCTCTGACACCATCC...ATCATAACAGCATGAAAGTGAGACATTGCAACCACATTTGGGAAGCTGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACAGTTAAGGTCCATATaGCAGAAGAAACCAGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: RELRTLNRRPSLAVTVARQLRSI*QKKPVI Trigger: TATTACTGGTTTCTTCTGTCATATGGACCTTAACTG...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACGCTTTGCTTACATTCTaGAAAAGCCTGAAAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDALLTF*KSLKIL Trigger: TAGGATTTTCAGGCTTTTCCAGAATGTAAGCAAAGC...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCAGTAACAGAACAAAAATaGGCAAGGAATCACAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: ITRQICPPHSNRQLLHEPVTEQK*ARNHKT Trigger: TGTTTTGTGATTCCTTGCCCATTTTTGTTCTGTTAC...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | CAGAGTTCCTGCGCCCAGGCTCTTTCAGACCCGAGGTaGCTCATGGGAGCACCCTGCTGGCAGCAGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSSCAQALSDPR*LMGAPCWQQVA Trigger: GGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGGCACCTCGGGTCTGAAAGAGCCTGGGCGCAGGAACTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | CCCTGCTGGCAGCAGGTGGCCTGTGACGAGGGAGACTaGACCTTTCCTATTTGGAGGCTTCCAGGGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PCWQQVACDEGD*TFPIWRLPGAW Trigger: CCAGGCCCCTGGAAGCCTCCAAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | GGCACCAAAGCAAGCCACAGTGAGAGCAGGGCATCATaGCACGTGCCTGACCCTGGCACTGGAGAGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTKASHSESRAS*HVPDPGTGEMQ Trigger: CTGCATCTCTCCAGTGCCAGGGTCAGGCACGTGGCATGATGCCCTGCTCTCACTGTGGCTTGCTTTGGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | CCTCATGGGAGCACCCTGCTGGCAGCAGGTGGCCTGTaGCGAGGGAGACTGAACCTTTCCTATTTGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PHGSTLLAAGGL*RGRLNLSYLEA Trigger: AGCCTCCAAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | GGTCTCCAGCAGGCCCCTGGTCTCCACAGGGCTTCCTaGCACCTAAGAAATGGCAACCACAGCCTTCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLQQAPGLHRAS*HLRNGNHSLLR Trigger: CCTAAGAAGGCTGTGGTTGCCATTTCTTAGGTGGCAGGAAGCCCTGTGGAGACCAGGGGCCTGCTGGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | CAGGCCACACACTGTCCCGCTGTGTTGATGAGCCTTTaGCCTGCATCTCTGAACCCCGTGGTCCTACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QATHCPAVLMSL*PASLNPVVLPA Trigger: TGCAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | CGAGGTGCCTCATGGGAGCACCCTGCTGGCAGCAGGTaGCCTGTGACGAGGGAGACTGAACCTTTCCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: RGASWEHPAGSR*PVTRETEPFLF Trigger: AAATAGGAAAGGTTCAGTCTCCCTCGTCACAGGCCACCTGCTGCCAGCAGGGTGCTCCCATGAGGCACCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | CATCATGCCACGTGCCTGACCCTGGCACTGGAGAGATaGAGGCAGGAGGATCAGGATTTCAAGGCCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: HHATCLTLALER*RQEDQDFKAIT Trigger: GGTGATGGCCTTGAAATCCTGATCCTCCTGCCTGCATCTCTCCAGTGCCAGGGTCAGGCACGTGGCATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | CTCAAGAAGGGAGAGCAGCAAAGCACAGGACGGGGATaGCAGGTGGCACCAAAGCAAGCCACAGTGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKKGEQQSTGRG*QVAPKQATVRA Trigger: TGCTCTCACTGTGGCTTGCTTTGGTGCCACCTGGCATCCCCGTCCTGTGCTTTGCTGCTCTCCCTTCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTAGCTATCCTGAGGCCAGCAGCAGGTGTCTaGGGAGAAATCAGAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PPSRHFPTASKAYLAILRPAAGV*GEIRRG Trigger: ACCTCTTCTGATTTCTCCCAAGACACCTGCTGCTGG...CCTCAGGATAGCTAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | GGTGTCAGCGGGACGCCAAGAAGCTCCCATTTCTACTaGGTCCCAGGCCCTCAACTCCCTTTACTGCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: GVSGTPRSSHFY*VPGPQLPLLHW Trigger: CCAATGCAGTAAAGGGAGTTGAGGGCCTGGGACTCAGTAGAAATGGGAGCTTCTTGGCGTCCCGCTGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | CACACACTGTCCCGCTGTGTTGATGAGCCTTTGGCCTaGATCTCTGAACCCCGTGGTCCTACCTGCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTLSRCVDEPLA*ISEPRGPTCTK Trigger: CTTTGTGCAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | CAATATGCTCCTTCGATGCATCTAGCATGGGCCTCCTaGCTCAAGAAGGGAGAGCAGCAAAGCACAGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: QYAPSMHLAWAS*LKKGEQQSTGR Trigger: CCGTCCTGTGCTTTGCTGCTCTCCCTTCTTGAGGCAGGAGGCCCATGCTAGATGCATCGAAGGAGCATATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGGGACCCCCTACACACACACATACCCACACACTCCCTaGTCCCTTCCCTTCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TASKAYLAILRGTPYTHTYPHTP*SLPFNV Trigger: AACATTGAAGGGAAGGGACAAGGGAGTGTGTGGGTA...TGTGTGTGTGTAGGGGGTCCCCCTCAGGATAGCTAGGTAGGCCTTTGATGCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | TCCCAGGCCCTCAACTCCCTTTACTGCATTGGTATCTaGATGACACACTTCTGGCGCATAGACCCTACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SQALNSLYCIGI*MTHFWRIDPTP Trigger: GGGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGGGAGTTGAGGGCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | TTGAGTGTCAAGCTTCTCAGAGGGGGCTGCAGTACCTaGGAGCTGGGTATGTGTGTGAGCACATTCACATGC | + |
|
Preference number: 3 (lower is better) Translates to: LSVKLLRGGCST*ELGMCVSTFTC Trigger: GCATGTGAATGTGCTCACACACATACCCAGCTCCCAGGTACTGCAGCCCCCTCTGAGAAGCTTGACACTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATaGAGGACTGACATTTCCCAGAGTTCCTGCGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQCQDCVAAIPA*RTDISQSSCAQ Trigger: CTGGGCGCAGGAACTCTGGGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | ACAGGGAGGCAGAGTGTCCCACAGAAAACCAGAAAATaGATAAGTCCTGAGGTGGGACCTTGGCATCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGRQSVPQKTRK*ISPEVGPWHQA Trigger: AGCCTGATGCCAAGGTCCCACCTCAGGACTTATGCATTTTCTGGTTTTCTGTGGGACACTCTGCCTCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | GAGAGTTCAGGGTTAGATGGGAGCAAAGCCCAGCTGTaGAGGCTTCTGATTAGCCCTCAGAAGCTCTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ESSGLDGSKAQL*RLLISPQKLLW Trigger: CCATAAGAGCTTCTGAGGGCTAATCAGAAGCCTGCACAGCTGGGCTTTGCTCCCATCTAACCCTGAACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | TCCTACCTGCACAAAGCTACAAAACTGACAGCGATGTaGTTTCTGCCTATGCCTCCCTCCAGGCACTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYLHKATKLTAM*FLPMPPSRHFP Trigger: GGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAACCACATCGCTGTCAGTTTTGTAGCTTTGTGCAGGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | GGGACTACCATGTGGCAGGATCAATGCAAGCTACTTTaGGTGACCATAGAGCCATTTCGGGGAGACCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GTTMWQDQCKLL*VTIEPFRGDLT Trigger: TGTCAGGTCTCCCCGAAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | CAATGGCTACAATATGCTCCTTCGATGCATCTAGCATaGGCCTCCTGCCTCAAGAAGGGAGAGCAGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QWLQYAPSMHLA*ASCLKKGEQQS Trigger: GCTTTGCTGCTCTCCCTTCTTGAGGCAGGAGGCCCATGCTAGATGCATCGAAGGAGCATATTGTAGCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGCACTGTCCCGCTGTGTaGATGAGCCTTTGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLNRRPSLAVTVARPREVHCPAV*MSLWPA Trigger: TGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTG...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGATGTGTTGATGAGCCTTaGGCCTGCATCTCTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: RELRTLNRRPSLAVTVARCVDEP*ACISEP Trigger: GGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACA...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAACTACTAAGCCAGGAGGTGAGGCAGGCCTGTGATCCCAGTTACTTGGGATCAATGCAAGCTACTTaGGGTGACCATAGAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GKLLSQEVRQACDPSYLGSMQAT*GDHRAI Trigger: AATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGA...TCCCAAGTAACTGGGATCACAGGCCTGCCTCACCTCCTGGCTTAGTAGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | GCTGAGGGGTTAGGATCCCAAATTCCAAGGCCTGTCTaGAATAAAGTGAGTTCAAGGACAGCCCAAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: AEGLGSQIPRPV*NKVSSRTAQAT Trigger: AGTTGCTTGGGCTGTCCTTGAACTCACTTTATTCCAGACAGGCCTTGGAATTTGGGATCCTAACCCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | AGCCCAAGCAACTTAGTGAGACCTTGTCTTGAAATATaGTGTAGCTCAGTGGTGGAGCCCCTGCCTAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: SPSNLVRPCLEI*CSSVVEPLPRI Trigger: GATTCTAGGCAGGGGCTCCACCACTGAGCTACATCATATTTCAAGACAAGGTCTCACTAAGTTGCTTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | ATGTTGAGGAGGGCACCTCATCCATTCACCAACGTTTaGAACCTGCTCGTCTTTCAAGGGCAATGCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MLRRAPHPFTNV*NLLVFQGQCQD Trigger: ATCTTGGCATTGCCCTTGAAAGACGAGCAGGTTTCAAACGTTGGTGAATGGATGAGGTGCCCTCCTCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | ATTTCTACTGAGTCCCAGGCCCTCAACTCCCTTTACTaGATTGGTATCTGGATGACACACTTCTGGCGCATA | + |
|
Preference number: 3 (lower is better) Translates to: ISTESQALNSLY*IGIWMTHFWRI Trigger: TATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGGGAGTTGAGGGCCTGGGACTCAGTAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR GCA 72 bp | ATGTTCACTACAGGGACTACCATGTGGCAGGATCAATaGAAGCTACTTTGGGTGACCATAGAGCCATTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: MFTTGTTMWQDQ*KLLWVTIEPFR Trigger: CCGAAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCTGTAGTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | TCCCTTTACTGCATTGGTATCTGGATGACACACTTCTaGCGCATAGACCCTACTCCCATTCAGTACCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLYCIGIWMTHF*RIDPTPIQYLG Trigger: TCCTAGGTACTGAATGGGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | CAGCTGCCAGGATCCCACGGGAAGTATTTCCAAGTGTaGGTTTCTAATCTTCCATACCCTAAAGACCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QLPGSHGKYFQV*VSNLPYPKDPI Trigger: AATGGGGTCTTTAGGGTATGGAAGATTAGAAACCCACACTTGGAAATACTTCCCGTGGGATCCTGGCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGCTTCCCAAATGTGGTaGCAATGTCTCACTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: TLNRRPSLAVTVARPREVASQMW*QCLTFM Trigger: CATGAAAGTGAGACATTGCAACCACATTTGGGAAGC...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGAGGAAACCTACTGTTaGAAACACTATTCCATAGCG | + |
|
Preference number: 3 (lower is better) Translates to: TLNRRPSLAVTVARPREVEETYC*KHYSIA Trigger: CGCTATGGAATAGTGTTTCAAACAGTAGGTTTCCTC...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | CCATTGGTAGTAATGTTCACTACAGGGACTACCATGTaGCAGGATCAATGCAAGCTACTTTGGGTGACCATA | + |
|
Preference number: 3 (lower is better) Translates to: PLVVMFTTGTTM*QDQCKLLWVTI Trigger: TATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCTGTAGTGAACATTACTACCAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | TTATCGTCCACACCAAAGCTTTGGAGAGCAAATGACTaGCAATCTTCTGCACTCCAAGAGACTAAAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSTPKLWRAND*QSSALQETKGS Trigger: AGACCCTTTAGTCTCTTGGAGTGCAGAAGATTGTCAGTCATTTGCTCTCCAAAGCTTTGGTGTGGACGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR TCA 72 bp | CAAAACACAAAAGTGCCCTGTACAAGTTTATGGAGCTaGCCAGGACACACACAATGGCTACAATATGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QNTKVPCTSLWS*PGHTQWLQYAP Trigger: AGGAGCATATTGTAGCCATTGTGTGTGTCCTGGTCAGCTCCATAAACTTGTACAGGGCACTTTTGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CCA 72 bp | GAAATCCATCTCAGATTCTATTTGTACTTGACCCACTaGAACATCACAGGTTCAGGGAAAACTACTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EIHLRFYLYLTH*NITGSGKTTKP Trigger: TGGCTTAGTAGTTTTCCCTGAACCTGTGATGTTCCAGTGGGTCAAGTACAAATAGAATCTGAGATGGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | ACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGGGACCCCCTACACACACACAGGCTCCGAGCGGCAGTaGACCCCGAGTCCCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TASKAYLAILRGTPYTHTGSERQ*TPSPRC Trigger: GCATCGGGGACTCGGGGTGCACTGCCGCTCGGAGCC...TGTGTGTGTGTAGGGGGTCCCCCTCAGGATAGCTAGGTAGGCCTTTGATGCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTACCAGGGCCCGGGAGCTaGGGGTGGGCAACTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPMPPSRHFPTASKAYLPGPGS*GWATQL Trigger: GAGCTGAGTTGCCCACCCGCAGCTCCCGGGCCCTGG...TAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGAACCCTACCTGCAGCCCAGCACAGGGCTAGGTACATGGTTCCAGCATGCCTCTCCCAGAGCTaGGGTCAAGGGCTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLPAAQHRARYMVPACLSQS*GQGLLA Trigger: AGCGAGGAGCCCTTGACCCCAGCTCTGGGAGAGGCA...TGCTGGAACCATGTACCTAGCCCTGTGCTGGGCTGCAGGTAGGGTTCTGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTAAGCAGAGCTCCGGCCTaGGCTGTGGGCAGTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPMPPSRHFPTASKAYLSRAPA*AVGSAC Trigger: GCACGCACTGCCCACAGCTCAGGCCGGAGCTCTGCT...TAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAACTACTAAGCCAGGAGGTGAGGCAGGCCTGTGATCCCAGTTACTTGGGAGCTAGCCAACAGGGCTaGCCTCCACGCCCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKLLSQEVRQACDPSYLGASQQG*PPRPCP Trigger: CGGGCAGGGGCGTGGAGGCCAGCCCTGTTGGCTAGC...TCCCAAGTAACTGGGATCACAGGCCTGCCTCACCTCCTGGCTTAGTAGTTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | CCAGGCCACACACTGTCCCGCTGTGTTGATGAGCCTTaGGCCTGCATCTCTGAACCCCGTGGTCCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGHTLSRCVDEP*ACISEPRGPTC Trigger: GCAGGTAGGACCACGGGGTTCAGAGATGCAGGCCAAAGGCTCATCAACACAGCGGGACAGTGTGTGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCTGCAGCGCCTCCGCCTaGGTCCGCAGCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQCQDCVAAIPAWRTDISCSASA*VRSTTC Trigger: GCAGGTGGTGCTGCGGACCCAGGCGGAGGCGCTGCA...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGGGACCCCCTACACACACACATTCCAGAACCTCGGGTaGATCTTCGCCCTGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TASKAYLAILRGTPYTHTFQNLG*IFALAV Trigger: GACGGCCAGGGCGAAGATCCACCCGAGGTTCTGGAA...TGTGTGTGTGTAGGGGGTCCCCCTCAGGATAGCTAGGTAGGCCTTTGATGCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCCGCCAAGTCCAGTCGTaGGCTGCCCAGGCGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQCQDCVAAIPAWRTDISRQVQS*AAQALQ Trigger: CTGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCG...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACCTGCACCTCCCGCCGTaGCCTCACCTGCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDLHLPP*PHLPRT Trigger: GGTCCTGGGCAGGTGAGGGCACGGCGGGAGGTGCAG...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTCAGGACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGAGAGCGCGCTCAACGCTaGACCTCCCGCCGTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RELRTLNRRPSLAVTVARERAQR*TSRRAL Trigger: GAGGGCACGGCGGGAGGTGCAGCGTTGAGCGCGCTC...TCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCACCCAGGACCCCAGCCTaGCCTCTACCTCGGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITRQICPPHSNRQLLHEPPRTPA*PLPRLA Trigger: CGCGAGCCGAGGTAGAGGCCAGGCTGGGGTCCTGGG...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACAAGGGGTGGGCCCAGTaGGTGCTGAGGCAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDKGWAQ*VLRQAQ Trigger: CTGCGCCTGCCTCAGCACCCACTGGGCCCACCCCTT...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACGGTGGATCTTCGCCCTaGCCGTCCGTGCGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDGGSSP*PSVRTP Trigger: CGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACC...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCAGCGGTCACTGCTGCTaGAATCCGCCGGCGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GQCQDCVAAIPAWRTDISSGHCC*NPPAAQ Trigger: TTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCT...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCAGTCCGCAGCACCACCTaGAGGCGCTCTAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ITRQICPPHSNRQLLHEPVRSTT*RRSSSS Trigger: CGAGGAGCTAGAGCGCCTGCAGGTGGTGCTGCGGAC...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCAAGTCCAGTCGTGCGCTaGCCAGGCGCTCCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITRQICPPHSNRQLLHEPSPVVR*PGAPDQ Trigger: CTGGTCTGGAGCGCCTGGGCAGCGCACGACTGGACT...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCACCGCAGCTCTCAGGCTaGGGACTCCAGAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITRQICPPHSNRQLLHEPPQLSG*GLQSPA Trigger: GGCAGGACTCTGGAGTCCCCAGCCTGAGAGCTGCGG...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACCCAATACCAGCAAGTTaGCCTCCGCCGCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDPIPAS*PPPPRA Trigger: GGCCCTGGGCGGCGGAGGCCAACTTGCTGGTATTGG...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | GGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACATTTCCACCTCGAAGCCATCCTaGGCAGGAGGCAGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQCQDCVAAIPAWRTDISTSKPS*AGGRSL Trigger: GAGGCTCCTGCCTCCTGCCCAGGATGGCTTCGAGGT...GGAAATGTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGGCAGGCGCAGCACCTaGGTCTCCAGGATCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TLNRRPSLAVTVARPREVGRRST*VSRIQP Trigger: GGGTTGGATCCTGGAGACCCAGGTGCTGCGCCTGCC...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ATTACCAGACAGATTTGTCCCCCACATTCCAACAGACAGCTCCTTCATGAGCCACCGCAGCACCACCCGTaGGCCATAGGAAGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITRQICPPHSNRQLLHEPPQHHP*AIGRRA Trigger: CGCTCTCCTTCCTATGGCCCACGGGTGGTGCTGCGG...TGGCTCATGAAGGAGCTGTCTGTTGGAATGTGGGGGACAAATCTGTCTGGTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR GCA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGAGCTTCCAGCTCGGCTaGGCCCAACACCTCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLNRRPSLAVTVARPREVSFQLG*AQHLEA Trigger: GGCTTCGAGGTGTTGGGCGCAGCCGAGCTGGAAGCT...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGGCAATGCCAAGATTGTGTAGCTGCAATTCCAGCATGGAGGACTGACTCATTGGTTGGGCTCTaGGGGTCCCAGCACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQGQCQDCVAAIPAWRTDSLVGL*GSQHRL Trigger: GAGGCGGTGCTGGGACCCCCAGAGCCCAACCAATGA...GTCAGTCCTCCATGCTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTACTGCATTGGTATCTGGATGACACACTTCTGGCGCATAGACCCTACTCCTCCAGAGCACTACGTTaGGGCGCTCTGGAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLHWYLDDTLLAHRPYSSRALR*GALEQD Trigger: ATCCTGCTCCAGAGCGCCCCAACGTAGTGCTCTGGA...GGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAGATACCAATGCAGTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | AGGGACTACCATGTGGCAGGATCAATGCAAGCTACTTaGGGTGACCATAGAGCCATTTCGGGGAGACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDYHVAGSMQAT*GDHRAISGRPD Trigger: GTCAGGTCTCCCCGAAATGGCTCTATGGTCACCCAAAGTAGCTTGCATTGATCCTGCCACATGGTAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | TTTAGAGAGCTCAGGACACTTAATAGGAGACCGAGTTaGGCTGTTACTGTAGCCAGACCAAGGGAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRELRTLNRRPS*AVTVARPREVG Trigger: CCCCACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGTCCTGAGCTCTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCAGCTTCCCAAATGTGGTTGCAATGTCTCACTTTCATGCTGTTATGATGAGCAGGATAAGGGGTaGGCCCAGTGGGTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQLPKCGCNVSLSCCYDEQDKG*AQWVLR Trigger: CCTCAGCACCCACTGGGCCCACCCCTTATCCTGCTC...ATCATAACAGCATGAAAGTGAGACATTGCAACCACATTTGGGAAGCTGAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | CAGCACAGGGCTAGGTACATGGTTCCAGCAGAGTGTTaGCCTTTAATATGTGAGGCACTGATCAAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHRARYMVPAEC*PLICEALIKTP Trigger: TGGGGTTTTGATCAGTGCCTCACATATTAAAGGCAAACACTCTGCTGGAACCATGTACCTAGCCCTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | CTGTTCTTTCATCAGGTAACTTATACTTCTTTCCTTTaGGGAGCCAGCACTCCAAGGCTTCTATCTCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFHQVTYTSFL*GASTPRLLSPR Trigger: GCGGGGAGATAGAAGCCTTGGAGTGCTGGCTCCCAAAAGGAAAGAAGTATAAGTTACCTGATGAAAGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCAGCTTCCCAAATGTGGTTGCAATGTCTCACTTTCATGCTGTTATGATGCTTTAGCTGCATTCTaGGAATCTCCAGGGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISQLPKCGCNVSLSCCYDALAAF*ESPGRR Trigger: TCTGCGCCCTGGAGATTCCCAGAATGCAGCTAAAGC...ATCATAACAGCATGAAAGTGAGACATTGCAACCACATTTGGGAAGCTGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| 3UTR CAA 72 bp | AACGAACAGGCAAGTGAGAGAATGAGAATACAGCCATaGGTAGTAATGTTCACTACAGGGACTACCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEQASERMRIQP*VVMFTTGTTMW Trigger: CCACATGGTAGTCCCTGTAGTGAACATTACTACCAATGGCTGTATTCTCATTCTCTCACTTGCCTGTTCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS GCA 90 bp | GCCTGGCCTCTACCTCGGCTCGCGTCACCGGGCCCGGGAAGCGCGTaGGCGTTGCCAGTACTCCGGGAGCCAGGCCCAAGGCGCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AWPLPRLASPGPGSA*ALPVLREPGPRRAH Trigger: GTGAGCGCGCCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCCGAGGTAGAGGCCAGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS GCA 90 bp | CTCTACCTCGGCTCGCGTCACCGGGCCCGGGAAGCGCGTGCGCGTTaGCAGTACTCCGGGAGCCAGGCCCAAGGCGCGCTCACGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYLGSRHRAREARAR*QYSGSQAQGALTSC Trigger: GCACGACGTGAGCGCGCCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCCGAGGTAGAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS GCA 90 bp | GGCCTACATTGGTGGTGCCGGCCACCGCCAAGTCCAGTCGTGCGCTaGCCAGGCGCTCCAGACCAGCGCGCACCCACGACAGCGCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHWWCRPPPSPVVR*PGAPDQRAPTTAPP Trigger: AGGCGGCGCTGTCGTGGGTGCGCGCTGGTCTGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS GCA 90 bp | CACCAATACCAGCAAGTTGGCCTCCGCCGCCCAGGGCCCGGGAGCTaGGGGTGGGCAACTCAGCTCACCCAGGAAGAGGCCCGGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HQYQQVGLRRPGPGS*GWATQLTQEEARSR Trigger: GCGGCTCCGGGCCTCTTCCTGGGTGAGCTGAGTTGCCCACCCGCAGCTCCCGGGCCCTGGGCGGCGGAGGCCAACTTGCTGGTATTGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS GCA 90 bp | CACAAGGCCTACATTGGTGGTGCCGGCCACCGCCAAGTCCAGTCGTaGGCTGCCCAGGCGCTCCAGACCAGCGCGCACCCACGACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HKAYIGGAGHRQVQS*AAQALQTSAHPRQR Trigger: GCGCTGTCGTGGGTGCGCGCTGGTCTGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS CCA 90 bp | GACTTGCAGGTGGCAGCGCCAGCAGCAGAGCTCCGGCCTGAGCTGTaGGCAGTGCGTGCTGGAGCCAGGTTCCGAGGCCTGGGAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: DLQVAAPAAELRPEL*AVRAGARFRGLGDR Trigger: GCGGTCTCCCAGGCCTCGGAACCTGGCTCCAGCACGCACTGCCCACAGCTCAGGCCGGAGCTCTGCTGCTGGCGCTGCCACCTGCAAGTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
||
| CDS CCA 90 bp | GCGCAGCACGGTAACCCAGCCCACCTGTTGCCGCAGCACCACCCGTaGGCCATAGGAAGGAGAGCGCGCTCAACGCTGCACCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AQHGNPAHLLPQHHP*AIGRRARSTLHLPP Trigger: CGGCGGGAGGTGCAGCGTTGAGCGCGCTCTCCTTCCTATGGCCCACGGGTGGTGCTGCGGCAACAGGTGGGCTGGGTTACCGTGCTGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | CGGTCCAGAGCACTACGTTGGGGCGCTCTGGAGCAGGATAAGGGGTaGGCCCAGTGGGTGCTGAGGCAGGCGCAGCACCTGGGTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSRALRWGALEQDKG*AQWVLRQAQHLGLQ Trigger: CTGGAGACCCAGGTGCTGCGCCTGCCTCAGCACCCACTGGGCCCACCCCTTATCCTGCTCCAGAGCGCCCCAACGTAGTGCTCTGGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | GCACCACCTGCAGGCGCTCTAGCTCCTCGCAGCGGTCACTGCTGCTaGAATCCGCCGGCGGCACAAAGAGAGGCGCAGCTCCTAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: APPAGALAPRSGHCC*NPPAAQREAQLLTQ Trigger: CTGGGTTAGGAGCTGCGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGGTGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | GCAGCACCACCTGCAGGCGCTCTAGCTCCTCGCAGCGGTCACTGCTaGTGCAATCCGCCGGCGGCACAAAGAGAGGCGCAGCTCCTAACC | + |
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Preference number: 5 (lower is better) Translates to: AAPPAGALAPRSGHC*CNPPAAQREAQLLT Trigger: GGTTAGGAGCTGCGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGGTGGTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | TCCGCAGCACCACCTGCAGGCGCTCTAGCTCCTCGCAGCGGTCACTaGTGCTGCAATCCGCCGGCGGCACAAAGAGAGGCGCAGCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SAAPPAGALAPRSGH*CCNPPAAQREAQLL Trigger: TAGGAGCTGCGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGGTGGTGCTGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | CAGGCCACCGGTCTCGAAGGCCTCACGAACAGCTTCCAGCTCGGCTaGGCCCAACACCTCGAAGCCATCCTGGGCAGGAGGCAGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: QATGLEGLTNSFQLG*AQHLEAILGRRQEP Trigger: AGGCTCCTGCCTCCTGCCCAGGATGGCTTCGAGGTGTTGGGCGCAGCCGAGCTGGAAGCTGTTCGTGAGGCCTTCGAGACCGGTGGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | CCTCCAGCACCTCCCATAGCTCATCCTCCGGGCTCCGAGCGGCAGTaGACCCCGAGTCCCCGATGCCAGCTTTCTTTCCTTCGCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: PPAPPIAHPPGSERQ*TPSPRCQLSFLRCV Trigger: CACGCAGCGAAGGAAAGAAAGCTGGCATCGGGGACTCGGGGTGCACTGCCGCTCGGAGCCCGGAGGATGAGCTATGGGAGGTGCTGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | GATCCAACCCCAGCAGCATATCTAGCACAAGGCCTACATTGGTGGTaGCGGCCACCGCCAAGTCCAGTCGTGCGCTGCCCAGGCGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DPTPAAYLAQGLHWW*RPPPSPVVRCPGAP Trigger: TGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTGCTAGATATGCTGCTGGGGTTGGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | AACTCAGCTCACCCAGGAAGAGGCCCGGAGCCGCAGCTCTCAGGCTaGGGACTCCAGAGTCCTGCCGTCCATCGGGAATCTCTACCGTGT | + |
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Preference number: 5 (lower is better) Translates to: NSAHPGRGPEPQLSG*GLQSPAVHRESLPC Trigger: ACACGGTAGAGATTCCCGATGGACGGCAGGACTCTGGAGTCCCCAGCCTGAGAGCTGCGGCTCCGGGCCTCTTCCTGGGTGAGCTGAGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | CTCCAGGATCCAACCCCAGCAGCATATCTAGCACAAGGCCTACATTaGTGGTGCCGGCCACCGCCAAGTCCAGTCGTGCGCTGCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LQDPTPAAYLAQGLH*WCRPPPSPVVRCPG Trigger: GCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTGCTAGATATGCTGCTGGGGTTGGATCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | TTCTGGGCCTTTTCTTCTTCCAGAACCTCGGGTGGATCTTCGCCCTaGCCGTCCGTGCGCACACCGACGAGTGGAGCATCTGGGGACACC | + |
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Preference number: 5 (lower is better) Translates to: FWAFSSSRTSGGSSP*PSVRTPTSGASGDT Trigger: GGTGTCCCCAGATGCTCCACTCGTCGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACCCGAGGTTCTGGAAGAAGAAAAGGCCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS-3UTR CAA 90 bp | ACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGGGACCCCCTACACACACACAAACCCAGCCCACCTGTaGCCGCAGCACCACCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: TASKAYLAILRGTPYTHTNPAHL*PQHHPW Trigger: CCACGGGTGGTGCTGCGGCAACAGGTGGGCTGGGTT...TGTGTGTGTGTAGGGGGTCCCCCTCAGGATAGCTAGGTAGGCCTTTGATGCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | TTTCTTCTTCCAGAACCTCGGGTGGATCTTCGCCCTGGCCGTCCGTaGGCACACCGACGAGTGGAGCATCTGGGGACACCAATGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: FLLPEPRVDLRPGRP*AHRRVEHLGTPMSG Trigger: TCCGCTCATTGGTGTCCCCAGATGCTCCACTCGTCGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACCCGAGGTTCTGGAAGAAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | CCCATCACTTGCATTCTGGGCCTTTTCTTCTTCCAGAACCTCGGGTaGATCTTCGCCCTGGCCGTCCGTGCGCACACCGACGAGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PITCILGLFFFQNLG*IFALAVRAHTDEWS Trigger: GCTCCACTCGTCGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACCCGAGGTTCTGGAAGAAGAAAAGGCCCAGAATGCAAGTGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTAGCTATCCTGAGGGTCCAGAGCACTACGTaGGGGCGCTCTGGAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PPSRHFPTASKAYLAILRVQSTT*GRSGAG Trigger: TCCTGCTCCAGAGCGCCCCAACGTAGTGCTCTGGAC...CCTCAGGATAGCTAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 90 bp | CCCAGCACTGTTCAACAAGGCTGCAGTCTCATCCCGGGCTTTAGCTaGATTCTGGGAATCTCCAGGGCGCAGATTCCGGACAGCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PSTVQQGCSLIPGFS*ILGISRAQIPDSQQ Trigger: CTGCTGGCTGTCCGGAATCTGCGCCCTGGAGATTCCCAGAATGCAGCTAAAGCCCGGGATGAGACTGCAGCCTTGTTGAACAGTGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 90 bp | CTGTTCAACAAGGCTGCAGTCTCATCCCGGGCTTTAGCTGCATTCTaGGAATCTCCAGGGCGCAGATTCCGGACAGCCAGCAGCGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LFNKAAVSSRALAAF*ESPGRRFRTASSGV Trigger: AACCCCGCTGCTGGCTGTCCGGAATCTGCGCCCTGGAGATTCCCAGAATGCAGCTAAAGCCCGGGATGAGACTGCAGCCTTGTTGAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS-3UTR CAA 90 bp | ACACTTAATAGGAGACCGAGTTTGGCTGTTACTGTAGCCAGACCAAGGGAAGTGACCAATACCAGCAAGTaGGCCTCCGCCGCCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: TLNRRPSLAVTVARPREVTNTSK*ASAAQG Trigger: GCCCTGGGCGGCGGAGGCCAACTTGCTGGTATTGGT...CACTTCCCTTGGTCTGGCTACAGTAACAGCCAAACTCGGTCTCCTATTAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGCCTATGCCTCCCTCCAGGCACTTTCCCACGGCATCAAAGGCCTACCTACTGAGTTCCCATCACTaGCATTCTGGGCCTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLPMPPSRHFPTASKAYLLSSHH*HSGPFL Trigger: AAGAAAAGGCCCAGAATGCAAGTGATGGGAACTCAG...TAGGTAGGCCTTTGATGCCGTGGGAAAGTGCCTGGAGGGAGGCATAGGCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 90 bp | CCCCTGCCCGTAGCGCAGCCGCCTTCCTCCGCGCCGCCCGGGGACTaGCAGGTGGCAGCGCCAGCAGCAGAGCTCCGGCCTGAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPVAQPPSSAPPGD*QVAAPAAELRPELW Trigger: CCACAGCTCAGGCCGGAGCTCTGCTGCTGGCGCTGCCACCTGCAAGTCCCCGGGCGGCGCGGAGGAAGGCGGCTGCGCTACGGGCAGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | GGCTCGCGTCACCGGGCCCGGGAAGCGCGTGCGCGTTaGCAGTACTCCGGGAGCCAGGCCCAAGGCGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: GSRHRAREARAR*QYSGSQAQGAL Trigger: GAGCGCGCCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 72 bp | CGGCTCGCGTCACCGGGCCCGGGAAGCGCGTGCGCGTaGCCAGTACTCCGGGAGCCAGGCCCAAGGCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RLASPGPGSACA*PVLREPGPRRA Trigger: AGCGCGCCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CTACCTCGGCTCGCGTCACCGGGCCCGGGAAGCGCGTaGGCGTTGCCAGTACTCCGGGAGCCAGGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPRLASPGPGSA*ALPVLREPGPR Trigger: CCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCCGAGGTAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 90 bp | CCTCTACCTCGGCTCGCGTCACCGGGCCCGGGAAGCGCGTGCGCGTaGCCAGTACTCCGGGAGCCAGGCCCAAGGCGCGCTCACGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: PLPRLASPGPGSACA*PVLREPGPRRAHVV Trigger: CACGACGTGAGCGCGCCTTGGGCCTGGCTCCCGGAGTACTGGCAACGCGCACGCGCTTCCCGGGCCCGGTGACGCGAGCCGAGGTAGAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CAGCAAGTTGGCCTCCGCCGCCCAGGGCCCGGGAGCTaGGGGTGGGCAACTCAGCTCACCCAGGAAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QQVGLRRPGPGS*GWATQLTQEEA Trigger: GGCCTCTTCCTGGGTGAGCTGAGTTGCCCACCCGCAGCTCCCGGGCCCTGGGCGGCGGAGGCCAACTTGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | TGGTGGTGCCGGCCACCGCCAAGTCCAGTCGTGCGCTaGCCAGGCGCTCCAGACCAGCGCGCACCCACGACA | + |
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Preference number: 6 (lower is better) Translates to: WWCRPPPSPVVR*PGAPDQRAPTT Trigger: TGTCGTGGGTGCGCGCTGGTCTGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CTCTGCAGCGCCTCCGCCTGGGTCCGCAGCACCACCTaGAGGCGCTCTAGCTCCTCGCAGCGGTCACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCSASAWVRSTT*RRSSSSQRSLL Trigger: CAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGGTGGTGCTGCGGACCCAGGCGGAGGCGCTGCAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | TCCAGCTCGGCTGCGCCCAACACCTCGAAGCCATCCTaGGCAGGAGGCAGGAGCCTCTGCAGCGCCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSAAPNTSKPS*AGGRSLCSASA Trigger: GGCGGAGGCGCTGCAGAGGCTCCTGCCTCCTGCCCAGGATGGCTTCGAGGTGTTGGGCGCAGCCGAGCTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | TACATTGGTGGTGCCGGCCACCGCCAAGTCCAGTCGTaGGCTGCCCAGGCGCTCCAGACCAGCGCGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: YIGGAGHRQVQS*AAQALQTSAHP Trigger: TGGGTGCGCGCTGGTCTGGAGCGCCTGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | GCAGGCGCTCTAGCTCCTCGCAGCGGTCACTGCTGCTaGAATCCGCCGGCGGCACAAAGAGAGGCGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGALAPRSGHCC*NPPAAQREAQL Trigger: GAGCTGCGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CCTGCAGGCGCTCTAGCTCCTCGCAGCGGTCACTGCTaGTGCAATCCGCCGGCGGCACAAAGAGAGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAGALAPRSGHC*CNPPAAQREAQ Trigger: CTGCGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CCACCTGCAGGCGCTCTAGCTCCTCGCAGCGGTCACTaGTGCTGCAATCCGCCGGCGGCACAAAGAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPAGALAPRSGH*CCNPPAAQREA Trigger: CGCCTCTCTTTGTGCCGCCGGCGGATTGCAGCAGCAGTGACCGCTGCGAGGAGCTAGAGCGCCTGCAGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CCAGAACCTCGGGTGGATCTTCGCCCTGGCCGTCCGTaGGCACACCGACGAGTGGAGCATCTGGGGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: PEPRVDLRPGRP*AHRRVEHLGTP Trigger: TGGTGTCCCCAGATGCTCCACTCGTCGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACCCGAGGTTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | CACCCAGGAAGAGGCCCGGAGCCGCAGCTCTCAGGCTaGGGACTCCAGAGTCCTGCCGTCCATCGGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: HPGRGPEPQLSG*GLQSPAVHRES Trigger: AGATTCCCGATGGACGGCAGGACTCTGGAGTCCCCAGCCTGAGAGCTGCGGCTCCGGGCCTCTTCCTGGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | GGTAACCCAGCCCACCTGTTGCCGCAGCACCACCCGTaGGCCATAGGAAGGAGAGCGCGCTCAACGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GNPAHLLPQHHP*AIGRRARSTLH Trigger: GTGCAGCGTTGAGCGCGCTCTCCTTCCTATGGCCCACGGGTGGTGCTGCGGCAACAGGTGGGCTGGGTTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS TCA 72 bp | CCTGGGCCCAGTTCTCCTCTGTGGGAGCCCCGGGGGTaGCAAGGATCAGGGCATCGTAGTGGGTTGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGPSSPLWEPRG*QGSGHRSGLGE Trigger: CTCACCCAACCCACTACGATGCCCTGATCCTTGTCACCCCCGGGGCTCCCACAGAGGAGAACTGGGCCCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS TCA 72 bp | GCGCACACCGACGAGTGGAGCATCTGGGGACACCAATaGGCGGACCTGGGCCCAGTTCTCCTCTGTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AHTDEWSIWGHQ*ADLGPVLLCGS Trigger: GCTCCCACAGAGGAGAACTGGGCCCAGGTCCGCTCATTGGTGTCCCCAGATGCTCCACTCGTCGGTGTGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | GGTCTCGAAGGCCTCACGAACAGCTTCCAGCTCGGCTaGGCCCAACACCTCGAAGCCATCCTGGGCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLEGLTNSFQLG*AQHLEAILGRR Trigger: CCTCCTGCCCAGGATGGCTTCGAGGTGTTGGGCGCAGCCGAGCTGGAAGCTGTTCGTGAGGCCTTCGAGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 90 bp | CTTGTAGAAGTACACCGTGCGCAGCACGGTAACCCAGCCCACCTGTaGCCGCAGCACCACCCGTGGGCCATAGGAAGGAGAGCGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVEVHRAQHGNPAHL*PQHHPWAIGRRARS Trigger: TGAGCGCGCTCTCCTTCCTATGGCCCACGGGTGGTGCTGCGGCAACAGGTGGGCTGGGTTACCGTGCTGCGCACGGTGTACTTCTACAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | CCAGCAGCATATCTAGCACAAGGCCTACATTGGTGGTaGCGGCCACCGCCAAGTCCAGTCGTGCGCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAAYLAQGLHWW*RPPPSPVVRCP Trigger: TGGGCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTGCTAGATATGCTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | ACCCCAGCAGCATATCTAGCACAAGGCCTACATTGGTaGTGCCGGCCACCGCCAAGTCCAGTCGTGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPAAYLAQGLHW*CRPPPSPVVRC Trigger: GCAGCGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTGCTAGATATGCTGCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | TGCATTCTGGGCCTTTTCTTCTTCCAGAACCTCGGGTaGATCTTCGCCCTGGCCGTCCGTGCGCACACCGAC | + |
|
Preference number: 6 (lower is better) Translates to: CILGLFFFQNLG*IFALAVRAHTD Trigger: GTCGGTGTGCGCACGGACGGCCAGGGCGAAGATCCACCCGAGGTTCTGGAAGAAGAAAAGGCCCAGAATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 72 bp | TCCAACCCCAGCAGCATATCTAGCACAAGGCCTACATaGGTGGTGCCGGCCACCGCCAAGTCCAGTCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SNPSSISSTRPT*VVPATAKSSRA Trigger: CGCACGACTGGACTTGGCGGTGGCCGGCACCACCAATGTAGGCCTTGTGCTAGATATGCTGCTGGGGTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CCA 72 bp | AAGGCTGCAGTCTCATCCCGGGCTTTAGCTGCATTCTaGGAATCTCCAGGGCGCAGATTCCGGACAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAAVSSRALAAF*ESPGRRFRTAS Trigger: GCTGGCTGTCCGGAATCTGCGCCCTGGAGATTCCCAGAATGCAGCTAAAGCCCGGGATGAGACTGCAGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS GCA 72 bp | GTTCAACAAGGCTGCAGTCTCATCCCGGGCTTTAGCTaGATTCTGGGAATCTCCAGGGCGCAGATTCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VQQGCSLIPGFS*ILGISRAQIPD Trigger: GTCCGGAATCTGCGCCCTGGAGATTCCCAGAATGCAGCTAAAGCCCGGGATGAGACTGCAGCCTTGTTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 72 bp | TTCCTTCGCTGCGTGCATCCCCTGAGTTCCCATCACTaGCATTCTGGGCCTTTTCTTCTTCCAGAACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRCVHPLSSHH*HSGPFLLPEPR Trigger: CCGAGGTTCTGGAAGAAGAAAAGGCCCAGAATGCAAGTGATGGGAACTCAGGGGATGCACGCAGCGAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS TCA 72 bp | GATGCCAGCTTTCTTTCCTTCGCTGCGTGCATCCCCTaGGTTCCCATCACTTGCATTCTGGGCCTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DASFLSFAACIP*VPITCILGLFF Trigger: GAAGAAAAGGCCCAGAATGCAAGTGATGGGAACTCAGGGGATGCACGCAGCGAAGGAAAGAAAGCTGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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| CDS CAA 90 bp | CAGCTTTCTTTCCTTCGCTGCGTGCATCCCCTGAGTTCCCATCACTaGCATTCTGGGCCTTTTCTTCTTCCAGAACCTCGGGTGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLSFLRCVHPLSSHH*HSGPFLLPEPRVDL Trigger: AAGATCCACCCGAGGTTCTGGAAGAAGAAAAGGCCCAGAATGCAAGTGATGGGAACTCAGGGGATGCACGCAGCGAAGGAAAGAAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049020.9 |
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