Pregenerated sensors for IRGM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069874Ensembl transcript IDs: ENSMUST00000058704.9, ENSMUST00000108836.2, ENSMUST00000209079.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGGCACCTGTCTTAAATGCAAAGTCACACACACAGATTCAAATGTaGGTGCTTCATGGCAAAGGGAGAAGGGTCCTTGTGTGTCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: AAPVLNAKSHTQIQM*VLHGKGRRVLVCLD Trigger: ATCCAGACACACAAGGACCCTTCTCCCTTTGCCATGAAGCACTCACATTTGAATCTGTGTGTGTGACTTTGCATTTAAGACAGGTGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR GCA 90 bp | TTTCTGAGTACACACGAATGTCATAAGGACGACAGACAAAACCTCTaGGGTTTCTTTGCAGACCTCTCCTGTGACTTCCATGGCACCACA | + |
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Preference number: 1 (lower is better) Translates to: FLSTHECHKDDRQNL*GFFADLSCDFHGTT Trigger: TGTGGTGCCATGGAAGTCACAGGAGAGGTCTGCAAAGAAACCGCAGAGGTTTTGTCTGTCGTCCTTATGACATTCGTGTGTACTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR TCA 90 bp | GCGGAGCAGCATCTATGCCATAACCTTGACCTCAGGAATTATTTCTaGGTACACACGAATGTCATAAGGACGACAGACAAAACCTCTGCG | + |
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Preference number: 1 (lower is better) Translates to: AEQHLCHNLDLRNYF*VHTNVIRTTDKTSA Trigger: CGCAGAGGTTTTGTCTGTCGTCCTTATGACATTCGTGTGTACTCAGAAATAATTCCTGAGGTCAAGGTTATGGCATAGATGCTGCTCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR GCA 90 bp | GAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCTTAAATaGAAAGTCACACACACAGATTCAAATGTGAGTGCTTCATGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ERKEHDRTRSGTCLK*KVTHTDSNVSASWQ Trigger: TTGCCATGAAGCACTCACATTTGAATCTGTGTGTGTGACTTTGCATTTAAGACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGGAGGACAGAGGCCTGAGACCGCTAGGGAAGTTGGGCTGACAGTACTGCATCAGAGGAGGGGTTaGAGAACAGGCCTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RRGGQRPETAREVGLTVLHQRRG*RTGLCW Trigger: CCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATG...CAGTACTGTCAGCCCAACTTCCCTAGCGGTCTCAGGCCTCTGTCCTCCCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCCCTTGTGTGTCTGGATaGAGGTGCAGCCTGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SKAGLRERSMTEHGAAPVPCVSG*RCSLQN Trigger: ATTCTGCAGGCTGCACCTCCATCCAGACACACAAGG...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCGGGTGTTATCTCAACTaGGGGTACACATGGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: SKAGLRERSMTEHGAAPVGCYLN*GYTWGT Trigger: TGTACCCCATGTGTACCCCCAGTTGAGATAACACCC...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCGGTAGTGTAGGGTGCTaGGAATCATTCTCTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SKAGLRERSMTEHGAAPVGSVGC*ESFSSA Trigger: TGCTGAAGAGAATGATTCTCAGCACCCTACACTACC...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGGAGGACAGAGGCCTGAGACCGCTAGGGAAGTTGGGCTGACAGTACTGACACAGATTCAAATGTaGGTGCTTCATGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RRGGQRPETAREVGLTVLTQIQM*VLHGKG Trigger: CCCTTTGCCATGAAGCACTCACATTTGAATCTGTGT...CAGTACTGTCAGCCCAACTTCCCTAGCGGTCTCAGGCCTCTGTCCTCCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCACACAGATTCAAATGTaGGTGCTTCATGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SKAGLRERSMTEHGAAPVTQIQM*VLHGKG Trigger: CCCTTTGCCATGAAGCACTCACATTTGAATCTGTGT...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCGGGTGTTATCTCAACTaGGGGTACACATGGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: ELMPLSSLHIRGGVGEQAGCYLN*GYTWGT Trigger: TGTACCCCATGTGTACCCCCAGTTGAGATAACACCC...GGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTCATGGGGTACAGGGCTaGGGAGAAGACTCCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: SLCKETFGRVYEGVSGLGHGVQG*GEDSSC Trigger: ACAACTGGAGTCTTCTCCCCAGCCCTGTACCCCATG...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATCATCAGAGGAGGGGTTaGAGAACAGGCCTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: YAKRPLGVSMKESLDLVHHQRRG*RTGLCW Trigger: CCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATG...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATGGGTCCTTGTGTGTCTaGATGGAGGTGCAGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: YAKRPLGVSMKESLDLVHGSLCV*MEVQPA Trigger: TGCAGGCTGCACCTCCATCCAGACACACAAGGACCC...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGCATGGGGTACAGGGCTaGGGAGAAGACTCCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: QPAELGAAEEVEVQYKTEHGVQG*GEDSSC Trigger: ACAACTGGAGTCTTCTCCCCAGCCCTGTACCCCATG...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTCCTTGTGTGTCTGGATaGAGGTGCAGCCTGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SLCKETFGRVYEGVSGLGPCVSG*RCSLQN Trigger: ATTCTGCAGGCTGCACCTCCATCCAGACACACAAGG...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATGTTGGCAGAGGCAGGTaGATTTCTGAGTTTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: YAKRPLGVSMKESLDLVHVGRGR*ISEFEA Trigger: GGCCTCAAACTCAGAAATCCACCTGCCTCTGCCAAC...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGGGGTGTTATCTCAACTaGGGGTACACATGGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: QPAELGAAEEVEVQYKTEGCYLN*GYTWGT Trigger: TGTACCCCATGTGTACCCCCAGTTGAGATAACACCC...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR GCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATCTATTCATCTCTCTCTaGTCCCTGATAGCGGACACA | + |
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Preference number: 2 (lower is better) Translates to: YAKRPLGVSMKESLDLVHLFISL*SLIADT Trigger: TGTGTCCGCTATCAGGGAGCAGAGAGAGATGAATAG...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR CAA 90 bp | CTCAACAAATATAATTGGCATTTTCCTTCCATTTCAGAACAGATTTaGTTTCTTTCTAGGTATCAAAACCATAGCCTTCCATGTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LNKYNWHFPSISEQI*FLSRYQNHSLPCAR Trigger: CCTAGCACATGGAAGGCTATGGTTTTGATACCTAGAAAGAAACAAAATCTGTTCTGAAATGGAAGGAAAATGCCAATTATATTTGTTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR GCA 72 bp | CCAGCCCGGCCAACAGTGAGATCACAGTTTCCTCAGTaGTGGGGCCAGGTGAGATACCCTGTGACCAACACA | + |
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Preference number: 3 (lower is better) Translates to: PARPTVRSQFPQ*WGQVRYPVTNT Trigger: TGTGTTGGTCACAGGGTATCTCACCTGGCCCCAGCACTGAGGAAACTGTGATCTCACTGTTGGCCGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR CCA 72 bp | TGCTTCATGGCAAAGGGAGAAGGGTCCTTGTGTGTCTaGATGGAGGTGCAGCCTGCAGAATTAGGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: CFMAKGEGSLCV*MEVQPAELGAA Trigger: AGCAGCCCCTAATTCTGCAGGCTGCACCTCCATCCAGACACACAAGGACCCTTCTCCCTTTGCCATGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGACATCAGAGGAGGGGTaGGAGAACAGGCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QPAELGAAEEVEVQYKTETSEEG*ENRPLL Trigger: CAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGT...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR TCA 72 bp | GGCACCACATTAACCAAAGAACAAGCAGGTGGAAGGTaGGTCTTAGCAGAACTTGGCTCACCCCCAATCCCA | + |
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Preference number: 3 (lower is better) Translates to: GTTLTKEQAGGR*VLAELGSPPIP Trigger: TGGGATTGGGGGTGAGCCAAGTTCTGCTAAGACTCACCTTCCACCTGCTTGTTCTTTGGTTAATGTGGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR CCA 72 bp | ACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTaGCCACGTTTTTCAGACAATAGCCAAAGACAAGCT | + |
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Preference number: 3 (lower is better) Translates to: THQRRGWRTGLC*PRFSDNSQRQA Trigger: AGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR CCA 72 bp | CTTCCATGGCACCACATTAACCAAAGAACAAGCAGGTaGAAGGTGAGTCTTAGCAGAACTTGGCTCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: LPWHHINQRTSR*KVSLSRTWLTP Trigger: GGGGGTGAGCCAAGTTCTGCTAAGACTCACCTTCCACCTGCTTGTTCTTTGGTTAATGTGGTGCCATGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR TCA 72 bp | GCTGCTCTGTGCTCCCACTGTGATGACTTTCAGCTGTaGTGGACTGTACTAGCAAACTATGAGCCCAAACTA | + |
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Preference number: 3 (lower is better) Translates to: AALCSHCDDFQL*WTVLANYEPKL Trigger: TAGTTTGGGCTCATAGTTTGCTAGTACAGTCCATCACAGCTGAAAGTCATCACAGTGGGAGCACAGAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR GCA 72 bp | TTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTaGTGGCCACGTTTTTCAGACAATAGCCAAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: FTHQRRGWRTGL*WPRFSDNSQRQ Trigger: TTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR GCA 72 bp | TATTGGTTGGCAGGTTGGCAGGATCTAGAATCACTATaGAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: YWLAGWQDLESL*KETFGRVYEGV Trigger: GACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGATTCTAGATCCTGCCAACCTGCCAACCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR TCA 72 bp | AGAATCACTATGCAAAGAGACCTTTGGGCGTGTCTATaGAGGAGTCTCTGGACTTGGTTCATGAAGGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: RITMQRDLWACL*RSLWTWFMKVG Trigger: TCCAACCTTCATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR CCA 72 bp | CTCGTCGTTGGCGCTAAGGTGAGCATGTGTCAAACATaGCATTCCAAACAATTAGAACAGGGAAACTTATCC | + |
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Preference number: 3 (lower is better) Translates to: LVVGAKVSMCQT*HSKQLEQGNLS Trigger: GGATAAGTTTCCCTGTTCTAATTGTTTGGAATGCCATGTTTGACACATGCTCACCTTAGCGCCAACGACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| 3UTR TCA 72 bp | ACGTGGATGATATCATTCTATAGGCTGGTCTTGGGCTaGATGAAAAGGAGAATGTGTGCCAAAGAGCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: TWMISFYRLVLG*MKRRMCAKEPY Trigger: ATAGGGCTCTTTGGCACACATTCTCCTTTTCATTCAGCCCAAGACCAGCCTATAGAATGATATCATCCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR TCA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACCACCCCAGTGGGAGCTaGATCTTTCTCTTCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSLHIRGGVGEQASAGHHPSGS*IFLFVS Trigger: GGACACGAAGAGAAAGATTCAGCTCCCACTGGGGTG...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCCCACACTCTGGGCTGTaGCCCCTAAGCCAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPPHSGL*PLSQAG Trigger: ACCTGCCTGGCTTAGGGGCCACAGCCCAGAGTGTGG...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGACCCAGTCATCTTGTTaGTACCTCTGGGTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPLYTSEEGLENRPLLATTQSSC*YLWVSW Trigger: CCAGGAGACCCAGAGGTACCAACAAGATGACTGGGT...CGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGAGGACAGAGGCCTGAGACCGCTAGGGAAGTTGGGCTGACAGTACTGTTCTCACCACCCCAGTaGGAGCTGAATCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RRGGQRPETAREVGLTVLFSPPQ*ELNLSL Trigger: AAGAGAAAGATTCAGCTCCCACTGGGGTGGTGAGAA...CAGTACTGTCAGCCCAACTTCCCTAGCGGTCTCAGGCCTCTGTCCTCCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCAGGTTGGTTTCTGGGTaGTTCTCACCACCCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGRLVSG*FSPPQW Trigger: CCACTGGGGTGGTGAGAACCACCCAGAAACCAACCT...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTCCACACTCTGGGCTGTaGCCCCTAAGCCAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLCKETFGRVYEGVSGLGPHSGL*PLSQAG Trigger: ACCTGCCTGGCTTAGGGGCCACAGCCCAGAGTGTGG...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGTCTTGTTGGTACCTCTaGGTCTCCTGGGACTCCATA | + |
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Preference number: 4 (lower is better) Translates to: SPLYTSEEGLENRPLLATSCWYL*VSWDSI Trigger: TATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGA...CGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR TCA 90 bp | ATGCCGGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACACCCCAGTGGGAGCTaGATCTTTCTCTTCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: MPELMPLSSLHIRGGVGEHPSGS*IFLFVS Trigger: GGACACGAAGAGAAAGATTCAGCTCCCACTGGGGTG...TTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCCGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGCCACACTCTGGGCTGTaGCCCCTAAGCCAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QPAELGAAEEVEVQYKTEPHSGL*PLSQAG Trigger: ACCTGCCTGGCTTAGGGGCCACAGCCCAGAGTGTGG...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACTCCCGGATATTCCTTTaGATACTCTGCAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSSLHIRGGVGEQASAGHSRIFL*ILCSSW Trigger: CCAGCTACTGCAGAGTATCCAAAGGAATATCCGGGA...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR TCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCTTCTTTAACCTCAGGTaGCTCAACTGCCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGLRERSMTEHGAAPVFFNLR*LNCLFH Trigger: ATGGAAGAGGCAGTTGAGTCACCTGAGGTTAAAGAA...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGTTCTTTAACCTCAGGTaGCTCAACTGCCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLYTSEEGLENRPLLATFFNLR*LNCLFH Trigger: ATGGAAGAGGCAGTTGAGTCACCTGAGGTTAAAGAA...CGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGAGGACAGAGGCCTGAGACCGCTAGGGAAGTTGGGCTGACAGTACTGTCCTCTGCATGGTTATaGCCAGCTTCACATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRGGQRPETAREVGLTVLSSAWL*PASHDL Trigger: TAAATCATGTGAAGCTGGCCATAACCATGCAGAGGA...CAGTACTGTCAGCCCAACTTCCCTAGCGGTCTCAGGCCTCTGTCCTCCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAGAAGGGTCCTTGTGTGTCTGGATGGAGGTGCAGCCTGCAGAATTAGGTCTTGTTGGTACCTCTaGGTCTCCTGGGACTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KGRRVLVCLDGGAACRIRSCWYL*VSWDSI Trigger: TATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGA...CCTAATTCTGCAGGCTGCACCTCCATCCAGACACACAAGGACCCTTCTCCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCTTCACTTTCTCCTTCTaGAGACTATCCCGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGLRERSMTEHGAAPVFTFSF*RLSRIF Trigger: GAATATCCGGGATAGTCTTCAGAAGGAGAAAGTGAA...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCCTTTGGGAAGTCATGTaGTTCAGGCTTAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGLRERSMTEHGAAPVLWEVM*FRLKDR Trigger: TCTGTCTTTAAGCCTGAATCACATGACTTCCCAAAG...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACCTTTGGGAAGTCATGTaGTTCAGGCTTAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSLHIRGGVGEQASAGHLWEVM*FRLKDR Trigger: TCTGTCTTTAAGCCTGAATCACATGACTTCCCAAAG...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCTTCTCACCACCCCAGTaGGAGCTGAATCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGFSPPQ*ELNLSL Trigger: AAGAGAAAGATTCAGCTCCCACTGGGGTGGTGAGAA...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCTCCCGGATATTCCTTTaGATACTCTGCAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGSRIFL*ILCSSW Trigger: CCAGCTACTGCAGAGTATCCAAAGGAATATCCGGGA...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCACCCAGTCATCTTGTTaGTACCTCTGGGTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPTQSSC*YLWVSW Trigger: CCAGGAGACCCAGAGGTACCAACAAGATGACTGGGT...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGAACTTCCTTGGCTTTaGCAGCAGTTTCATCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSLHIRGGVGEQASAGHELPWL*QQFHQV Trigger: TACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTTC...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCTTCTTTAACCTCAGGTaGCTCAACTGCCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGFFNLR*LNCLFH Trigger: ATGGAAGAGGCAGTTGAGTCACCTGAGGTTAAAGAA...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATAGGTTGGTTTCTGGGTaGTTCTCACCACCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YAKRPLGVSMKESLDLVHRLVSG*FSPPQW Trigger: CCACTGGGGTGGTGAGAACCACCCAGAAACCAACCT...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| 3UTR CAA 72 bp | AAATGTGAGTGCTTCATGGCAAAGGGAGAAGGGTCCTaGTGTGTCTGGATGGAGGTGCAGCCTGCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: KCECFMAKGEGS*CVWMEVQPAEL Trigger: TAATTCTGCAGGCTGCACCTCCATCCAGACACACAAGGACCCTTCTCCCTTTGCCATGAAGCACTCACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| 3UTR CAA 72 bp | GTCATAAGGACGACAGACAAAACCTCTGCGGTTTCTTaGCAGACCTCTCCTGTGACTTCCATGGCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VIRTTDKTSAVS*QTSPVTSMAPH Trigger: ATGTGGTGCCATGGAAGTCACAGGAGAGGTCTGCAAAGAAACCGCAGAGGTTTTGTCTGTCGTCCTTATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCTTCACTTTCTCCTTCTaGAGACTATCCCGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGFTFSF*RLSRIF Trigger: GAATATCCGGGATAGTCTTCAGAAGGAGAAAGTGAA...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCTCCCGGATATTCCTTTaGATACTCTGCAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPSRIFL*ILCSSW Trigger: CCAGCTACTGCAGAGTATCCAAAGGAATATCCGGGA...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGACCCAGTCATCTTGTTaGTACCTCTGGGTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPAELGAAEEVEVQYKTETQSSC*YLWVSW Trigger: CCAGGAGACCCAGAGGTACCAACAAGATGACTGGGT...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCGGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACTTTGGGAAGTCATGTaGTTCAGGCTTAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPELMPLSSLHIRGGVGELWEVM*FRLKDR Trigger: TCTGTCTTTAAGCCTGAATCACATGACTTCCCAAAG...TTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCCGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATTTCTCACCACCCCAGTaGGAGCTGAATCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YAKRPLGVSMKESLDLVHFSPPQ*ELNLSL Trigger: AAGAGAAAGATTCAGCTCCCACTGGGGTGGTGAGAA...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTGGAAAAGTAACAGGTTaGTTTCTGGGTGGTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCKETFGRVYEGVSGLGGKVTG*FLGGSH Trigger: GTGAGAACCACCCAGAAACCAACCTGTTACTTTTCC...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR TCA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTTCACTTTCTCCTTCTaGAGACTATCCCGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCKETFGRVYEGVSGLGFTFSF*RLSRIF Trigger: GAATATCCGGGATAGTCTTCAGAAGGAGAAAGTGAA...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGGGAAAAGTAACAGGTTaGTTTCTGGGTGGTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPAELGAAEEVEVQYKTEGKVTG*FLGGSH Trigger: GTGAGAACCACCCAGAAACCAACCTGTTACTTTTCC...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATGGAAAAGTAACAGGTTaGTTTCTGGGTGGTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YAKRPLGVSMKESLDLVHGKVTG*FLGGSH Trigger: GTGAGAACCACCCAGAAACCAACCTGTTACTTTTCC...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| 3UTR CAA 72 bp | CAGCTGACATTGCGGAGCAGCATCTATGCCATAACCTaGACCTCAGGAATTATTTCTGAGTACACACGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLTLRSSIYAIT*TSGIISEYTRM Trigger: CATTCGTGTGTACTCAGAAATAATTCCTGAGGTCAAGGTTATGGCATAGATGCTGCTCCGCAATGTCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGTCCTCTGCATGGTTATaGCCAGCTTCACATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPAELGAAEEVEVQYKTESSAWL*PASHDL Trigger: TAAATCATGTGAAGCTGGCCATAACCATGCAGAGGA...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATTCCTCTGCATGGTTATaGCCAGCTTCACATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YAKRPLGVSMKESLDLVHSSAWL*PASHDL Trigger: TAAATCATGTGAAGCTGGCCATAACCATGCAGAGGA...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGGAACTTCCTTGGCTTTaGCAGCAGTTTCATCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPAELGAAEEVEVQYKTEELPWL*QQFHQV Trigger: TACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTTC...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACCACCCAGTCATCTTGTaGGTACCTCTGGGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLHIRGGVGEQASAGHHPVIL*VPLGLL Trigger: CAGGAGACCCAGAGGTACCAACAAGATGACTGGGTG...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACACGAGGCCGTGGTACTaGATGACAGGGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLHIRGGVGEQASAGHTRPWY*MTGRSF Trigger: AAAAGACCTCCCTGTCATCAAGTACCACGGCCTCGT...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAGAAGGGTCCTTGTGTGTCTGGATGGAGGTGCAGCCTGCAGAATTAGGCAGCACCCAGTCATCTaGTTGGTACCTCTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGRRVLVCLDGGAACRIRQHPVI*LVPLGL Trigger: GAGACCCAGAGGTACCAACAAGATGACTGGGTGCTG...CCTAATTCTGCAGGCTGCACCTCCATCCAGACACACAAGGACCCTTCTCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCACGAGGCCGTGGTACTaGATGACAGGGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGTRPWY*MTGRSF Trigger: AAAAGACCTCCCTGTCATCAAGTACCACGGCCTCGT...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACATGAGCCTAAGGGCATaGATGAAAGATGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSLHIRGGVGEQASAGHMSLRA*MKDDMP Trigger: TGGCATGTCATCTTTCATCAATGCCCTTAGGCTCAT...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCAGTTTTCTCACAGACTaGGTAAAGGGTTTCGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKAGLRERSMTEHGAAPVSFLTD*VKGFDE Trigger: CTCGTCGAAACCCTTTACCAAGTCTGTGAGAAAACT...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCCAGCACCCAGTCATCTaGTTGGTACCTCTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPQHPVI*LVPLGL Trigger: GAGACCCAGAGGTACCAACAAGATGACTGGGTGCTG...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS CCA 90 bp | CCACATAGGGAAAGTGGGAGGAAAAGTAACAGGTTGGTTTCTGGGTaGTTCTCACCACCCCAGTGGGAGCTGAATCTTTCTCTTCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PHRESGRKSNRLVSG*FSPPQWELNLSLRV Trigger: GACACGAAGAGAAAGATTCAGCTCCCACTGGGGTGGTGAGAACCACCCAGAAACCAACCTGTTACTTTTCCTCCCACTTTCCCTATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTCACCCAGTCATCTTGTaGGTACCTCTGGGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCKETFGRVYEGVSGLGHPVIL*VPLGLL Trigger: CAGGAGACCCAGAGGTACCAACAAGATGACTGGGTG...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTCAGCACCCAGTCATCTaGTTGGTACCTCTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCKETFGRVYEGVSGLGQHPVI*LVPLGL Trigger: GAGACCCAGAGGTACCAACAAGATGACTGGGTGCTG...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGTTTAACAGAACTTCCTaGGCTTTGGCAGCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLYTSEEGLENRPLLATFNRTS*ALAAVS Trigger: TGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAA...CGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | TATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTTCATCACCCAGTCATCTTGTaGGTACCTCTGGGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YAKRPLGVSMKESLDLVHHPVIL*VPLGLL Trigger: CAGGAGACCCAGAGGTACCAACAAGATGACTGGGTG...ATGAACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACACAGCGATCTTTATTTaGTTTCTGGAAACGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLHIRGGVGEQASAGHTAIFI*FLETFC Trigger: ACAGAACGTTTCCAGAAACAAAATAAAGATCGCTGT...GTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCAGAATTAGGGGCTGCTGAAGAAGTTGAAGTCCAATATAAGACTGAGACGAGGCCGTGGTACTaGATGACAGGGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPAELGAAEEVEVQYKTETRPWY*MTGRSF Trigger: AAAAGACCTCCCTGTCATCAAGTACCACGGCCTCGT...CTCAGTCTTATATTGGACTTCAACTTCTTCAGCAGCCCCTAATTCTGCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCGAAAGCAGGGCTGAGAGAAAGGAGCATGACAGAACACGGAGCGGCACCTGTCAAGTATATCTTTCTGTaGTTTGCATCGACTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SKAGLRERSMTEHGAAPVKYIFL*FASTVM Trigger: CATCACAGTCGATGCAAACAACAGAAAGATATACTT...GACAGGTGCCGCTCCGTGTTCTGTCATGCTCCTTTCTCTCAGCCCTGCTTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCCTCTGCTGGCCACGAAGTATATCTTTCTGTaGTTTGCATCGACTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPLYTSEEGLENRPLLATKYIFL*FASTVM Trigger: CATCACAGTCGATGCAAACAACAGAAAGATATACTT...CGTGGCCAGCAGAGGCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAACAGGCTTTAACAGAACTTCCTaGGCTTTGGCAGCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVNAPLLFTHQRRGWRTGFNRTS*ALAAVS Trigger: TGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAA...GCCTGTTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 90 bp | AAGACAGATACCAGGAACATGGGGTGCTCCTTCACTTTCTCCTTCTaGAGACTATCCCGGATATTCCTTTGGATACTCTGCAGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTDTRNMGCSFTFSF*RLSRIFLWILCSSW Trigger: CCAGCTACTGCAGAGTATCCAAAGGAATATCCGGGATAGTCTTCAGAAGGAGAAAGTGAAGGAGCACCCCATGTTCCTGGTATCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 90 bp | GTGCGATACAACCGAGCCAGCACCCAGTCATCTTGTTGGTACCTCTaGGTCTCCTGGGACTCCATACTAGTGTTGAAATGTTTATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRYNRASTQSSCWYL*VSWDSILVLKCLFF Trigger: GAAAAATAAACATTTCAACACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCTGGCTCGGTTGTATCGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCATGAGCCTAAGGGCATaGATGAAAGATGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPMSLRA*MKDDMP Trigger: TGGCATGTCATCTTTCATCAATGCCCTTAGGCTCAT...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCAGTTTTCTCACAGACTaGGTAAAGGGTTTCGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPSFLTD*VKGFDE Trigger: CTCGTCGAAACCCTTTACCAAGTCTGTGAGAAAACT...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTATGAGCCTAAGGGCATaGATGAAAGATGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLCKETFGRVYEGVSGLGMSLRA*MKDDMP Trigger: TGGCATGTCATCTTTCATCAATGCCCTTAGGCTCAT...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCCACGTTTTTCAGACAATAGCCAAAGACAAGCTCTTCCCCATTCCCTTTAACAGAACTTCCTaGGCTTTGGCAGCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGHVFQTIAKDKLFPIPFNRTS*ALAAVS Trigger: TGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAA...GGGAATGGGGAAGAGCTTGTCTTTGGCTATTGTCTGAAAAACGTGGCCAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 90 bp | ATCTTTCTCTTCGTGTCCGATGAGCCTAAGGGCATTGATGAAAGATaGCATGCCATTGCCAGAGTCCCCAGTCACAGCGATCTTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFLFVSDEPKGIDER*HAIARVPSHSDLYF Trigger: AAAATAAAGATCGCTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCCCTTAGGCTCATCGGACACGAAGAGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 90 bp | AACCGAGCCAGCACCCAGTCATCTTGTTGGTACCTCTGGGTCTCCTaGGACTCCATACTAGTGTTGAAATGTTTATTTTTCATTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRASTQSSCWYLWVS*DSILVLKCLFFISR Trigger: TCTGGAAATGAAAAATAAACATTTCAACACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCTGGCTCGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | ATGCCGGAGTTAATGCCCCTCTCCTCTTTACACATCAGAGGAGGGGTTGGAGAAAAGTATATCTTTCTGTaGTTTGCATCGACTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: MPELMPLSSLHIRGGVGEKYIFL*FASTVM Trigger: CATCACAGTCGATGCAAACAACAGAAAGATATACTT...TTCTCCAACCCCTCCTCTGATGTGTAAAGAGGAGAGGGGCATTAACTCCGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS-3UTR CAA 90 bp | TCACTATGCAAAGAGACCTTTGGGCGTGTCTATGAAGGAGTCTCTGGACTTGGTACAGCGATCTTTATTTaGTTTCTGGAAACGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLCKETFGRVYEGVSGLGTAIFI*FLETFC Trigger: ACAGAACGTTTCCAGAAACAAAATAAAGATCGCTGT...ACCAAGTCCAGAGACTCCTTCATAGACACGCCCAAAGGTCTCTTTGCATAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 72 bp | TGGTTTCTGGGTGGTTCTCACCACCCCAGTGGGAGCTaGATCTTTCTCTTCGTGTCCGATGAGCCTAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WFLGGSHHPSGS*IFLFVSDEPKG Trigger: GCCCTTAGGCTCATCGGACACGAAGAGAAAGATTCAGCTCCCACTGGGGTGGTGAGAACCACCCAGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | GTGCGATACAACCGAGCCAGCACCCAGTCATCTTGTTaGTACCTCTGGGTCTCCTGGGACTCCATACTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRYNRASTQSSC*YLWVSWDSILV Trigger: CACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCTGGCTCGGTTGTATCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | CTCCACATAGGGAAAGTGGGAGGAAAAGTAACAGGTTaGTTTCTGGGTGGTTCTCACCACCCCAGTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHIGKVGGKVTG*FLGGSHHPSGS Trigger: GCTCCCACTGGGGTGGTGAGAACCACCCAGAAACCAACCTGTTACTTTTCCTCCCACTTTCCCTATGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 72 bp | AGTGCGATACAACCGAGCCAGCACCCAGTCATCTTGTaGGTACCTCTGGGTCTCCTGGGACTCCATACTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAIQPSQHPVIL*VPLGLLGLHTS Trigger: ACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCTGGCTCGGTTGTATCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 90 bp | GGTCCCACAGCTCCACATAGGGAAAGTGGGAGGAAAAGTAACAGGTaGGTTTCTGGGTGGTTCTCACCACCCCAGTGGGAGCTGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: GPTAPHRESGRKSNR*VSGWFSPPQWELNL Trigger: AAGATTCAGCTCCCACTGGGGTGGTGAGAACCACCCAGAAACCAACCTGTTACTTTTCCTCCCACTTTCCCTATGTGGAGCTGTGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | CTATCCCGGATATTCCTTTGGATACTCTGCAGTAGCTaGGGTTCAGGGAAGGTACTTGTGCTGAGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRIFLWILCSS*GSGKVLVLRSL Trigger: CAGGGACCTCAGCACAAGTACCTTCCCTGAACCCCAGCTACTGCAGAGTATCCAAAGGAATATCCGGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 90 bp | GTGGGAGCTGAATCTTTCTCTTCGTGTCCGATGAGCCTAAGGGCATaGATGAAAGATGACATGCCATTGCCAGAGTCCCCAGTCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGAESFSSCPMSLRA*MKDDMPLPESPVTA Trigger: CGCTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCCCTTAGGCTCATCGGACACGAAGAGAAAGATTCAGCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 72 bp | TTCGTGTCCGATGAGCCTAAGGGCATTGATGAAAGATaGCATGCCATTGCCAGAGTCCCCAGTCACAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: FVSDEPKGIDER*HAIARVPSHSD Trigger: ATCGCTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCCCTTAGGCTCATCGGACACGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | AACCGAGCCAGCACCCAGTCATCTTGTTGGTACCTCTaGGTCTCCTGGGACTCCATACTAGTGTTGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: NRASTQSSCWYL*VSWDSILVLKC Trigger: ACATTTCAACACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCTGGCTCGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | GAAAGTGGGAGGAAAAGTAACAGGTTGGTTTCTGGGTaGTTCTCACCACCCCAGTGGGAGCTGAATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESGRKSNRLVSG*FSPPQWELNLS Trigger: AGAAAGATTCAGCTCCCACTGGGGTGGTGAGAACCACCCAGAAACCAACCTGTTACTTTTCCTCCCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 72 bp | ACCAGGAACATGGGGTGCTCCTTCACTTTCTCCTTCTaGAGACTATCCCGGATATTCCTTTGGATACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRNMGCSFTFSF*RLSRIFLWILC Trigger: GCAGAGTATCCAAAGGAATATCCGGGATAGTCTTCAGAAGGAGAAAGTGAAGGAGCACCCCATGTTCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 72 bp | AGCGTCGGAGAAGTATTCAAATTCTTTAACCTCAGGTaGCTCAACTGCCTCTTCCATGTTGTCGAGCAACGG | + |
|
Preference number: 6 (lower is better) Translates to: SVGEVFKFFNLR*LNCLFHVVEQR Trigger: CCGTTGCTCGACAACATGGAAGAGGCAGTTGAGTCACCTGAGGTTAAAGAATTTGAATACTTCTCCGACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209079.2 |
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| CDS CAA 72 bp | GGACTCTACTCTCTCATTAACAGTTTTCTCACAGACTaGGTAAAGGGTTTCGACGAGGCCGTGGTACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLYSLINSFLTD*VKGFDEAVVLD Trigger: ATCAAGTACCACGGCCTCGTCGAAACCCTTTACCAAGTCTGTGAGAAAACTGTTAATGAGAGAGTAGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 90 bp | CTTTTTAATGGACTCTACTCTCTCATTAACAGTTTTCTCACAGACTaGGTAAAGGGTTTCGACGAGGCCGTGGTACTTGATGACAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFNGLYSLINSFLTD*VKGFDEAVVLDDRE Trigger: CTCCCTGTCATCAAGTACCACGGCCTCGTCGAAACCCTTTACCAAGTCTGTGAGAAAACTGTTAATGAGAGAGTAGAGTCCATTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS TCA 72 bp | TTTCTCATCCTCTGCATGGTTATGGCCAGCTTCACATaGTTTAAGCTGAACTGCTCAGAAGCTACGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: FLILCMVMASFT*FKLNCSEATMM Trigger: CATCATCGTAGCTTCTGAGCAGTTCAGCTTAAATCATGTGAAGCTGGCCATAACCATGCAGAGGATGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | AGCACCCAGTCATCTTGTTGGTACCTCTGGGTCTCCTaGGACTCCATACTAGTGTTGAAATGTTTATTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: STQSSCWYLWVS*DSILVLKCLFF Trigger: GAAAAATAAACATTTCAACACTAGTATGGAGTCCCAGGAGACCCAGAGGTACCAACAAGATGACTGGGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 72 bp | CCATTGCCAGAGTCCCCAGTCACAGCGATCTTTATTTaGTTTCTGGAAACGTTCTGTATGATCTCTTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PLPESPVTAIFI*FLETFCMISLT Trigger: AGTTAAAGAGATCATACAGAACGTTTCCAGAAACAAAATAAAGATCGCTGTGACTGGGGACTCTGGCAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 90 bp | GATGACATGCCATTGCCAGAGTCCCCAGTCACAGCGATCTTTATTTaGTTTCTGGAAACGTTCTGTATGATCTCTTTAACTATAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: DDMPLPESPVTAIFI*FLETFCMISLTIET Trigger: GGTTTCTATAGTTAAAGAGATCATACAGAACGTTTCCAGAAACAAAATAAAGATCGCTGTGACTGGGGACTCTGGCAATGGCATGTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 90 bp | AACTTCCTTGGCTTTGGCAGCAGTTTCATCAAGTATATCTTTCTGTaGTTTGCATCGACTGTGATGAGAGGTAAAGCAGCACTTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: NFLGFGSSFIKYIFL*FASTVMRGKAALHV Trigger: TACATGAAGTGCTGCTTTACCTCTCATCACAGTCGATGCAAACAACAGAAAGATATACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CAA 72 bp | GGAATGGAGAGTCTCAGGATTTTTAACAGAACTTCCTaGGCTTTGGCAGCAGTTTCATCAAGTATATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GMESLRIFNRTS*ALAAVSSSISF Trigger: GAAAGATATACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAAAATCCTGAGACTCTCCATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | GAATGGAGAGTCTCAGGATTTTTAACAGAACTTCCTTaGCTTTGGCAGCAGTTTCATCAAGTATATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EWRVSGFLTELP*LWQQFHQVYLS Trigger: AGAAAGATATACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAAAATCCTGAGACTCTCCATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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| CDS CCA 72 bp | AGAGTCTCAGGATTTTTAACAGAACTTCCTTGGCTTTaGCAGCAGTTTCATCAAGTATATCTTTCTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVSGFLTELPWL*QQFHQVYLSVV Trigger: AACAACAGAAAGATATACTTGATGAAACTGCTGCCAAAGCCAAGGAAGTTCTGTTAAAAATCCTGAGACTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058704.9 ENSMUST00000108836.2 ENSMUST00000209079.2 |
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