Pregenerated sensors for IRGM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046879Ensembl transcript IDs: ENSMUST00000049519.4, ENSMUST00000097271.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGACATCTCAGAAGAGGGCATCAGATCTCACTACGGATGGTTGTaGGCCATCACGTGGTTGCTGGGATTTGAACTCATGACCTTCGGA | + |
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Preference number: 1 (lower is better) Translates to: SDISEEGIRSHYGWL*AITWLLGFELMTFG Trigger: TCCGAAGGTCATGAGTTCAAATCCCAGCAACCACGTGATGGCTCACAACCATCCGTAGTGAGATCTGATGCCCTCTTCTGAGATGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGTAACCTGGCTTCTGTaGAAGAAGAAGGGTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLVTWLL*KKKGTR Trigger: CCTGGTACCCTTCTTCTTCCACAGAAGCCAGGTTAC...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATTCGAGACAGGGGAGATaGGTGATTTTAACTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FIICKYTVAVFRHLRRGHSRQGR*VILTPL Trigger: GAGAGGAGTTAAAATCACTCATCTCCCCTGTCTCGA...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATGTGGTTGCTGGGATTTaGACTCATGACCTTCGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FIICKYTVAVFRHLRRGHVVAGI*THDLRK Trigger: TTTCCGAAGGTCATGAGTTCAAATCCCAGCAACCAC...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCCCCTCAGTGGAACAATaGATTAGAATCGAGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: VFLTAKPSLQPKNKISIFPSVEQ*IRIETG Trigger: CCCTGTCTCGATTCTAATGCATTGTTCCACTGAGGG...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATGTAACCTGGCTTCTGTaGAAGAAGAAGGGTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNVTWLL*KKKGTR Trigger: CCTGGTACCCTTCTTCTTCCACAGAAGCCAGGTTAC...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCATCACGTGGTTGCTGGGATTTaGACTCATGACCTTCGGAAAAGCAGTTGGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*THDLRKSSWCS Trigger: AGAACACCAACTGCTTTTCCGAAGGTCATGAGTTCAAATCCCAGCAACCACGTGATGGCTCACAACCATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| 3UTR CCA 72 bp | ACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTaGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: TLTGSIFVSLDF*WRNRDLGKRSK Trigger: CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | TTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGATAGGACACTGGTGCTaGGGTCCCTGTCCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FWWRNRDLGKRSKVTWLLIGHWC*GPCPAW Trigger: CCAAGCTGGACAGGGACCTCAGCACCAGTGTCCTAT...CAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | AATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGATAGGACACTGGTGCTaGGGTCCCTGTCCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NRDLGKRSKVTWLLWKKKIGHWC*GPCPAW Trigger: CCAAGCTGGACAGGGACCTCAGCACCAGTGTCCTAT...CTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGTCCTCACCACCCCAGTaGGAGCCGAGGCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKSSPPQ*EPRHLH Trigger: ATGAAGATGCCTCGGCTCCCACTGGGGTGGTGAGGA...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTCTCGGATATTCTCCTaGATATTCTGTAGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: FWWRNRDLGKRSKVTWLLSRIFS*IFCRSR Trigger: CCGGCTCCTACAGAATATCCAGGAGAATATCCGAGA...CAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | GATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGTACCTCTCTAGGATGTTCTTaGTGTCCTGGGCAACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: DLGKRSKVTWLLWKKKGTSLGCS*CPGQLR Trigger: TCTTAGTTGCCCAGGACACCAAGAACATCCTAGAGA...GGTACCCTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGACAAAGGGGAAGGCTaGGCTCAGGGGAGCATAATG | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLDKGEG*AQGSIM Trigger: CATTATGCTCCCCTGAGCTCAGCCTTCCCCTTTGTC...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | AATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGCTACCTGCTGAACTaGTTCGTCATCTACACCAAA | + |
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Preference number: 4 (lower is better) Translates to: NRDLGKRSKVTWLLWKKKGYLLN*FVIYTK Trigger: TTTGGTGTAGATGACGAATCAGTTCAGCAGGTAGCC...CTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | CCCTCAGTGGAACAATGCATTAGAATCGAGACAGGGGAGATGAGTGATTTTAACAATCTGGGACAATGTTaGCACAGTCTCCTTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: PSVEQCIRIETGEMSDFNNLGQC*HSLLDS Trigger: GGAATCAAGGAGACTGTGGCAACATTGTCCCAGATT...GTTAAAATCACTCATCTCCCCTGTCTCGATTCTAATGCATTGTTCCACTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | GATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGTACCGAATGCATTCACAATTaGACATGTCATCAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DLGKRSKVTWLLWKKKGTECIHN*TCHQPQ Trigger: CTGAGGCTGATGACATGTGCAATTGTGAATGCATTC...GGTACCCTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCGAGGCATCTTCATCATaGCCGATGACTCGAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLQEAFLYLLISGGEIGIEASSS*PMTRSA Trigger: TGCACTTCGAGTCATCGGCCATGATGAAGATGCCTC...GATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGGAACAATGCATTAGAATCGAGACAGGGGAGATGAGTGATTTTAACACCACATTGGGAAAGTaGGATGAAGAGTACTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PSVEQCIRIETGEMSDFNTTLGK*DEEYSV Trigger: GACTGAGTACTCTTCATCCCACTTTCCCAATGTGGT...GTTAAAATCACTCATCTCCCCTGTCTCGATTCTAATGCATTGTTCCACTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGCTACGGTTTGGGCTGTaGCCCCCAATCCAGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKLRFGL*PPIQVS Trigger: ACTTACCTGGATTGGGGGCCACAGCCCAAACCGTAG...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGCTGTTTGGTATGACGTaGCAAAGGGGAAGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKLFGMT*QRGRLS Trigger: GCTCAGCCTTCCCCTTTGTCACGTCATACCAAACAG...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTACTGTTTGGTATGACGTaGCAAAGGGGAAGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLLFGMT*QRGRLS Trigger: GCTCAGCCTTCCCCTTTGTCACGTCATACCAAACAG...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | CCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTGTCCTTGTACTCCATaGCTACTGTCCCCATACTCT | + |
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Preference number: 4 (lower is better) Translates to: PLQEAFLYLLISGGEIGICPCTP*LLSPYS Trigger: AGAGTATGGGGACAGTAGTCATGGAGTACAAGGACA...GATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | GATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGTACCCAACTAAGAAAAGCATaGGTTTATGTCTCAAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: DLGKRSKVTWLLWKKKGTQLRKA*VYVSSV Trigger: GACGCTTGAGACATAAACGCATGCTTTTCTTAGTTG...GGTACCCTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATCTACGGTTTGGGCTGTaGCCCCCAATCCAGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNLRFGL*PPIQVS Trigger: ACTTACCTGGATTGGGGGCCACAGCCCAAACCGTAG...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGGAACAATGCATTAGAATCGAGACAGGGGAGATGAGTGATTTTAACCTCTTTCCCATGCTCTaGATAATTTTGGACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSVEQCIRIETGEMSDFNLFPML*IILDSF Trigger: GAAGCTGTCCAAAATTATCCAGAGCATGGGAAAGAG...GTTAAAATCACTCATCTCCCCTGTCTCGATTCTAATGCATTGTTCCACTGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTACCCACAGCACCACATTaGGAAAGTGGGATGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLPTAPH*ESGMKS Trigger: ACTCTTCATCCCACTTTCCCAATGTGGTGCTGTGGG...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGTCCCTGTCCAGCTTaGTCCAGACAATATAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLGPCPA*SRQYRT Trigger: GGTTCTATATTGTCTGGACCAAGCTGGACAGGGACC...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCGGCTACCTGCTGAACTaGTTCGTCATCTACACCAAA | + |
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Preference number: 4 (lower is better) Translates to: VFLTAKPSLQPKNKISIFGYLLN*FVIYTK Trigger: TTTGGTGTAGATGACGAATCAGTTCAGCAGGTAGCC...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTATGTCCTTGTACTCCATaGCTACTGTCCCCATACTCT | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLCPCTP*LLSPYS Trigger: AGAGTATGGGGACAGTAGTCATGGAGTACAAGGACA...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGAAGATGACATGCCATTaGCAGAGTCCCCAGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKKMTCH*QSPQSQ Trigger: TTGTGACTGGGGACTCTGGCAATGGCATGTCATCTT...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATAAGATGACATGCCATTaGCAGAGTCCCCAGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHKMTCH*QSPQSQ Trigger: TTGTGACTGGGGACTCTGGCAATGGCATGTCATCTT...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATGAGGCATCTTCATCATaGCCGATGACTCGAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNEASSS*PMTRSA Trigger: TGCACTTCGAGTCATCGGCCATGATGAAGATGCCTC...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATCCCACAGCACCACATTaGGAAAGTGGGATGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNPTAPH*ESGMKS Trigger: ACTCTTCATCCCACTTTCCCAATGTGGTGCTGTGGG...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATGGTCCCTGTCCAGCTTaGTCCAGACAATATAGAACC | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNGPCPA*SRQYRT Trigger: GGTTCTATATTGTCTGGACCAAGCTGGACAGGGACC...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCTCTCGGATATTCTCCTaGATATTCTGTAGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VFLTAKPSLQPKNKISIFSRIFS*IFCRSR Trigger: CCGGCTCCTACAGAATATCCAGGAGAATATCCGAGA...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATTGCATTGATGAAAGATaGCATGCCATTGCCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHCIDER*HAIARV Trigger: GACTCTGGCAATGGCATGTCATCTTTCATCAATGCA...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTACACAAAGATGCTCACTaGAATCTGGGACAATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLHKDAH*NLGQCC Trigger: GCAACATTGTCCCAGATTCCAGTGAGCATCTTTGTG...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAACCACATTGGGAAAGTaGGATGAAGAGTACTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLTTLGK*DEEYSV Trigger: GACTGAGTACTCTTCATCCCACTTTCCCAATGTGGT...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATTCTTCAAGGACTCGTTaGCTATTCTCTGCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHSSRTR*LFSASR Trigger: TCTGGAAGCAGAGAATAGCCAACGAGTCCTTGAAGA...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCTCTCTAGGATGTTCTTaGTGTCCTGGGCAACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: VFLTAKPSLQPKNKISIFSLGCS*CPGQLR Trigger: TCTTAGTTGCCCAGGACACCAAGAACATCCTAGAGA...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATTGCATTGATGAAAGATaGCATGCCATTGCCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNCIDER*HAIARV Trigger: GACTCTGGCAATGGCATGTCATCTTTCATCAATGCA...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAATCTGGGACAATGTTaGCACAGTCTCCTTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNNLGQC*HSLLDS Trigger: GGAATCAAGGAGACTGTGGCAACATTGTCCCAGATT...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR GCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTATCTCTGCTTCCAGACTaGTACTTTATCACCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLSLLPD*YFITND Trigger: ATCGTTGGTGATAAAGTAGCAGTCTGGAAGCAGAGA...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGAATGCATTCACAATTaGACATGTCATCAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLECIHN*TCHQPQ Trigger: CTGAGGCTGATGACATGTGCAATTGTGAATGCATTC...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATCACAAAGATGCTCACTaGAATCTGGGACAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNHKDAH*NLGQCC Trigger: GCAACATTGTCCCAGATTCCAGTGAGCATCTTTGTG...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGCTCTTTCCCATGCTCTaGATAATTTTGGACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKLFPML*IILDSF Trigger: GAAGCTGTCCAAAATTATCCAGAGCATGGGAAAGAG...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATTCTTCAAGGACTCGTTaGCTATTCTCTGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNSSRTR*LFSASR Trigger: TCTGGAAGCAGAGAATAGCCAACGAGTCCTTGAAGA...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATATGTTCTTGGTGTCCTaGGCAACTAAGAAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHMFLVS*ATKKSM Trigger: CATGCTTTTCTTAGTTGCCCAGGACACCAAGAACAT...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTATTCACTTTCTCCTTCTaGAGATTCTCTCGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLFTFSF*RFSRIF Trigger: GAATATCCGAGAGAATCTGCAGAAGGAGAAAGTGAA...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTACGATCTTCTCATAAGTaGCATAAAGGGTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGSIFVSLDFWWRNRDLRSSHK*HKGSLR Trigger: CCTTAAAGACCCTTTATGGCACTTATGAGAAGATCG...TAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATCGATCTTCTCATAAGTaGCATAAAGGGTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHRSSHK*HKGSLR Trigger: CCTTAAAGACCCTTTATGGCACTTATGAGAAGATCG...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATTCTCTGCTTCCAGACTaGTACTTTATCACCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNSLLPD*YFITND Trigger: ATCGTTGGTGATAAAGTAGCAGTCTGGAAGCAGAGA...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCGTTTCCAGTCCTCTCTaGGGAGAGTATAAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLTAKPSLQPKNKISIFVSSPL*GEYKSF Trigger: AAAACTTTTATACTCTCCGCAGAGAGGACTGGAAAC...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATGTTTCCAGTCCTCTCTaGGGAGAGTATAAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHLRRGHVSSPL*GEYKSF Trigger: AAAACTTTTATACTCTCCGCAGAGAGGACTGGAAAC...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR GCA 90 bp | GTGTTCTTAACTGCTAAGCCATCTCTCCAGCCCAAAAACAAAATTTCTATATTCCAACTAAGAAAAGCATaGGTTTATGTCTCAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLTAKPSLQPKNKISIFQLRKA*VYVSSV Trigger: GACGCTTGAGACATAAACGCATGCTTTTCTTAGTTG...GAATATAGAAATTTTGTTTTTGGGCTGGAGAGATGGCTTAGCAGTTAAGAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CCA 90 bp | CCACATTGGGAAAGTGGGATGAAGAGTACTCAGTCCGCGTCTTCGTaGTCCTCACCACCCCAGTGGGAGCCGAGGCATCTTCATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHWESGMKSTQSASS*SSPPQWEPRHLHHG Trigger: GCCATGATGAAGATGCCTCGGCTCCCACTGGGGTGGTGAGGACCACGAAGACGCGGACTGAGTACTCTTCATCCCACTTTCCCAATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS CCA 90 bp | AGGGGAAGGCTGAGCTCAGGGGAGCATAATGGGTCTCTGCCATGTTaGGGAGTAGTGGAGCAGCCTCGCAGGAACTGTGTGATGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGRLSSGEHNGSLPC*GVVEQPRRNCVMVS Trigger: TGAAACCATCACACAGTTCCTGCGAGGCTGCTCCACTACTCCCCAACATGGCAGAGACCCATTATGCTCCCCTGAGCTCAGCCTTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049519.4 |
||
| CDS TCA 90 bp | GGCATCTTCATCATGGCCGATGACTCGAAGTGCATTGATGAAAGATaGCATGCCATTGCCAGAGTCCCCAGTCACAAAGATGCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GIFIMADDSKCIDER*HAIARVPSHKDAHW Trigger: CCAGTGAGCATCTTTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCATCGGCCATGATGAAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CAA 90 bp | GATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGTACCAGACACTCGCCCATGTaGTCATCATCTCTGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: DLGKRSKVTWLLWKKKGTRHSPM*SSSLTP Trigger: CGGTGTCAGAGATGATGACAACATGGGCGAGTGTCT...GGTACCCTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACATCTCAGAAGAGGGCATTGGGTCTCTGCCATGTaGGGGAGTAGTGGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FIICKYTVAVFRHLRRGHWVSAM*GSSGAA Trigger: GGCTGCTCCACTACTCCCCAACATGGCAGAGACCCA...ATGCCCTCTTCTGAGATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049519.4 |
||
| CDS-3UTR CAA 90 bp | GATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGGTACCTTCTCTAGGATGTTCTaGGTGTCCTGGGCAACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLGKRSKVTWLLWKKKGTFSRMF*VSWATK Trigger: CTTAGTTGCCCAGGACACCAAGAACATCCTAGAGAA...GGTACCCTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | CCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCAGACACTCGCCCATGTaGTCATCATCTCTGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: PLQEAFLYLLISGGEIGIRHSPM*SSSLTP Trigger: CGGTGTCAGAGATGATGACAACATGGGCGAGTGTCT...GATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGATGACTCGAAGTGCATaGATGAAAGATGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FWWRNRDLGKRSKVTWLLMTRSA*MKDDMP Trigger: TGGCATGTCATCTTTCATCAATGCACTTCGAGTCAT...CAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | AATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGTGGAAGAAGAAGGACTTCATGTTGTCCTaGTACTCCATGACTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRDLGKRSKVTWLLWKKKDFMLS*YSMTTV Trigger: GACAGTAGTCATGGAGTACAAGGACAACATGAAGTC...CTTCTTCTTCCACAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS-3UTR CAA 90 bp | CCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCGACTTCATGTTGTCCTaGTACTCCATGACTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLQEAFLYLLISGGEIGIDFMLS*YSMTTV Trigger: GACAGTAGTCATGGAGTACAAGGACAACATGAAGTC...GATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGGTAACCTGGCTTCTGGAGAGTATAAAAGTTTaGGGACTTCATGTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWWRNRDLGKRSKVTWLLESIKV*GLHVVL Trigger: AAGGACAACATGAAGTCCCAAAACTTTTATACTCTC...CAGAAGCCAGGTTACCTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGTTCTCTAGGATGTTCTaGGTGTCCTGGGCAACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKFSRMF*VSWATK Trigger: CTTAGTTGCCCAGGACACCAAGAACATCCTAGAGAA...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGATGACTCGAAGTGCATaGATGAAAGATGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKMTRSA*MKDDMP Trigger: TGGCATGTCATCTTTCATCAATGCACTTCGAGTCAT...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | CCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCGAGAGTATAAAAGTTTaGGGACTTCATGTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLQEAFLYLLISGGEIGIESIKV*GLHVVL Trigger: AAGGACAACATGAAGTCCCAAAACTTTTATACTCTC...GATCCCTATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TTTGTATCTCTTGATTTCTGGTGGAGAAATAGGGATCTAGGAAAGAGATCTAAGAGAATGCATTCACAATaGCACATGTCATCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVSLDFWWRNRDLGKRSKRMHSQ*HMSSAS Trigger: TGAGGCTGATGACATGTGCAATTGTGAATGCATTCT...CTTAGATCTCTTTCCTAGATCCCTATTTCTCCACCAGAAATCAAGAGATACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS-3UTR CAA 90 bp | TCTAAAACCCTTACAGGAAGCATTTTTGTATCTCTTGATTTCTGGTGGAGAAATAGAATGCATTCACAATaGCACATGTCATCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKTLTGSIFVSLDFWWRNRMHSQ*HMSSAS Trigger: TGAGGCTGATGACATGTGCAATTGTGAATGCATTCT...ATTTCTCCACCAGAAATCAAGAGATACAAAAATGCTTCCTGTAAGGGTTTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CCA 72 bp | GAAAGTGGGATGAAGAGTACTCAGTCCGCGTCTTCGTaGTCCTCACCACCCCAGTGGGAGCCGAGGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESGMKSTQSASS*SSPPQWEPRHL Trigger: AAGATGCCTCGGCTCCCACTGGGGTGGTGAGGACCACGAAGACGCGGACTGAGTACTCTTCATCCCACTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CCA 72 bp | CTCCTACTGACCTCAGGTAACCTGCTGGAGCCTGTTTaGTATGACGTGACAAAGGGGAAGGCTGAGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLTSGNLLEPV*YDVTKGKAELR Trigger: CCTGAGCTCAGCCTTCCCCTTTGTCACGTCATACCAAACAGGCTCCAGCAGGTTACCTGAGGTCAGTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS TCA 72 bp | CCTCAGGTAACCTGCTGGAGCCTGTTTGGTATGACGTaGCAAAGGGGAAGGCTGAGCTCAGGGGAGCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: PQVTCWSLFGMT*QRGRLSSGEHN Trigger: ATTATGCTCCCCTGAGCTCAGCCTTCCCCTTTGTCACGTCATACCAAACAGGCTCCAGCAGGTTACCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CCA 72 bp | AATCCAGGTAAGTCCCACAGCACCACATTGGGAAAGTaGGATGAAGAGTACTCAGTCCGCGTCTTCGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NPGKSHSTTLGK*DEEYSVRVFVV Trigger: GACCACGAAGACGCGGACTGAGTACTCTTCATCCCACTTTCCCAATGTGGTGCTGTGGGACTTACCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CAA 90 bp | GTGGGAGCCGAGGCATCTTCATCATGGCCGATGACTCGAAGTGCATaGATGAAAGATGACATGCCATTGCCAGAGTCCCCAGTCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VGAEASSSWPMTRSA*MKDDMPLPESPVTK Trigger: CTTTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCATCGGCCATGATGAAGATGCCTCGGCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CAA 90 bp | TCATGGCCGATGACTCGAAGTGCATTGATGAAAGATGACATGCCATaGCCAGAGTCCCCAGTCACAAAGATGCTCACTGGAATCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SWPMTRSALMKDDMP*PESPVTKMLTGIWD Trigger: GTCCCAGATTCCAGTGAGCATCTTTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCATCGGCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS GCA 72 bp | ATGACATGCCATTGCCAGAGTCCCCAGTCACAAAGATaGTCACTGGAATCTGGGACAATGTTGCCACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTCHCQSPQSQR*SLESGTMLPQS Trigger: AGACTGTGGCAACATTGTCCCAGATTCCAGTGAGCATCTTTGTGACTGGGGACTCTGGCAATGGCATGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS CAA 72 bp | GAGGCATCTTCATCATGGCCGATGACTCGAAGTGCATaGATGAAAGATGACATGCCATTGCCAGAGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EASSSWPMTRSA*MKDDMPLPESP Trigger: TGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCATCGGCCATGATGAAGATGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | GTTTTCCTTCTCTTAAAGCTCTTTCGGTGCTCCTACTaGCCTCAGGTAACCTGCTGGAGCCTGTTTGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: VFLLLKLFRCSY*PQVTCWSLFGM Trigger: CATACCAAACAGGCTCCAGCAGGTTACCTGAGGTCAGTAGGAGCACCGAAAGAGCTTTAAGAGAAGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | GACTACTGTCCCCATACTCTGGGCTACCTGCTGAACTaGTTCGTCATCTACACCAAATATCAGTCGGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: DYCPHTLGYLLN*FVIYTKYQSVH Trigger: GTGTACCGACTGATATTTGGTGTAGATGACGAATCAGTTCAGCAGGTAGCCCAGAGTATGGGGACAGTAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | TCCATGACTACTGTCCCCATACTCTGGGCTACCTGCTaGACTGATTCGTCATCTACACCAAATATCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SMTTVPILWATC*TDSSSTPNISR Trigger: CCGACTGATATTTGGTGTAGATGACGAATCAGTTCAGCAGGTAGCCCAGAGTATGGGGACAGTAGTCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | TCACTGGAATCTGGGACAATGTTGCCACAGTCTCCTTaGTTCCGTAGACCAGTTCCAGTAGTTTTCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLESGTMLPQSP*FRRPVPVVFLL Trigger: GAGAAGGAAAACTACTGGAACTGGTCTACGGAATCAAGGAGACTGTGGCAACATTGTCCCAGATTCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | ATCATGGCCGATGACTCGAAGTGCATTGATGAAAGATaGCATGCCATTGCCAGAGTCCCCAGTCACAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: IMADDSKCIDER*HAIARVPSHKD Trigger: ATCTTTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCATCGGCCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS TCA 72 bp | ACACTTTCAGACACTCGCCCATGTTGTCATCATCTCTaGCACCGAGAGAATTCTTCAAGGACTCGTTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TLSDTRPCCHHL*HRENSSRTRWL Trigger: TAGCCAACGAGTCCTTGAAGAATTCTCTCGGTGTCAGAGATGATGACAACATGGGCGAGTGTCTGAAAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS CAA 72 bp | ATGACTCGAAGTGCATTGATGAAAGATGACATGCCATaGCCAGAGTCCCCAGTCACAAAGATGCTCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: MTRSALMKDDMP*PESPVTKMLTG Trigger: TCCAGTGAGCATCTTTGTGACTGGGGACTCTGGCAATGGCATGTCATCTTTCATCAATGCACTTCGAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS GCA 72 bp | CTTCAAGGACTCGTTGGCTATTCTCTGCTTCCAGACTaGTACTTTATCACCAACGATCTTCTCATAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQGLVGYSLLPD*YFITNDLLISA Trigger: GGCACTTATGAGAAGATCGTTGGTGATAAAGTAGCAGTCTGGAAGCAGAGAATAGCCAACGAGTCCTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
||
| CDS CAA 90 bp | ATGTTGTCATCATCTCTGACACCGAGAGAATTCTTCAAGGACTCGTaGGCTATTCTCTGCTTCCAGACTGCTACTTTATCACCAACGATC | + |
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Preference number: 6 (lower is better) Translates to: MLSSSLTPREFFKDS*AILCFQTATLSPTI Trigger: GATCGTTGGTGATAAAGTAGCAGTCTGGAAGCAGAGAATAGCCAACGAGTCCTTGAAGAATTCTCTCGGTGTCAGAGATGATGACAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CCA 72 bp | TCCCTCAGGATTTTCTCTAGGATGTTCTTGGTGTCCTaGGCAACTAAGAAAAGCATGCGTTTATGTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLRIFSRMFLVS*ATKKSMRLCLK Trigger: CTTGAGACATAAACGCATGCTTTTCTTAGTTGCCCAGGACACCAAGAACATCCTAGAGAAAATCCTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CAA 72 bp | TCATCTCTGACACCGAGAGAATTCTTCAAGGACTCGTaGGCTATTCTCTGCTTCCAGACTGCTACTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: SSLTPREFFKDS*AILCFQTATLS Trigger: TGATAAAGTAGCAGTCTGGAAGCAGAGAATAGCCAACGAGTCCTTGAAGAATTCTCTCGGTGTCAGAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS CAA 72 bp | AAGATGGAGTCCCTCAGGATTTTCTCTAGGATGTTCTaGGTGTCCTGGGCAACTAAGAAAAGCATGCGTTTA | + |
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Preference number: 6 (lower is better) Translates to: KMESLRIFSRMF*VSWATKKSMRL Trigger: TAAACGCATGCTTTTCTTAGTTGCCCAGGACACCAAGAACATCCTAGAGAAAATCCTGAGGGACTCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS GCA 72 bp | GAGAAATCTCAACAAACGGAAGAATGCATTCACAATTaGACATGTCATCAGCCTCAGTTTCCAGTCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EKSQQTEECIHN*TCHQPQFPVLS Trigger: AGAGAGGACTGGAAACTGAGGCTGATGACATGTGCAATTGTGAATGCATTCTTCCGTTTGTTGAGATTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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| CDS GCA 72 bp | GCATACGCATGGGAGAAATCTCAACAAACGGAAGAATaGATTCACAATTGCACATGTCATCAGCCTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AYAWEKSQQTEE*IHNCTCHQPQF Trigger: AAACTGAGGCTGATGACATGTGCAATTGTGAATGCATTCTTCCGTTTGTTGAGATTTCTCCCATGCGTATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049519.4 ENSMUST00000097271.4 |
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