Pregenerated sensors for IRF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041515Ensembl transcript IDs: ENSMUST00000047737.10, ENSMUST00000160943.3, ENSMUST00000162001.8, ENSMUST00000162658.8
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTGAGCAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTaGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: CLSRSASLCGLPEAP*RTPAHPSQRAPHPF Trigger: GAAAGGATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTGCTCAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR TCA 90 bp | CTTAGGACTGGGTATGGAGCTGGACAAGGAAGGGTGAGATGCCAGTaGATGGGTCTTCTCCACAGTGCCTGGTCCTCCTTTGATGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LRTGYGAGQGRVRCQ*MGLLHSAWSSFDAP Trigger: TGGGGCATCAAAGGAGGACCAGGCACTGTGGAGAAGACCCATTCACTGGCATCTCACCCTTCCTTGTCCAGCTCCATACCCAGTCCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR TCA 90 bp | AGGATTCTGTTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTaGGCAGGCCCCACCCAGCACCTTCACACAGTAGCCGGGAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: RILFACITHSVDPVC*AGPTQHLHTVAGKV Trigger: GACCTTCCCGGCTACTGTGTGAAGGTGCTGGGTGGGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR TCA 90 bp | TTTCACTGGGTCTTAGGACTGGGTATGGAGCTGGACAAGGAAGGGTaGGATGCCAGTGAATGGGTCTTCTCCACAGTGCCTGGTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: FHWVLGLGMELDKEG*DASEWVFSTVPGPP Trigger: AGGAGGACCAGGCACTGTGGAGAAGACCCATTCACTGGCATCTCACCCTTCCTTGTCCAGCTCCATACCCAGTCCTAAGACCCAGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 90 bp | AAAGCAGATGATGACTCTCCCTGCCCCCACATCTGCTTGGCTTTCTaGCCCTGTTGTGTACTGACCCTCAAACTAACTCCTTTTCAGCGG | + |
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Preference number: 1 (lower is better) Translates to: KADDDSPCPHICLAF*PCCVLTLKLTPFQR Trigger: CCGCTGAAAAGGAGTTAGTTTGAGGGTCAGTACACAACAGGGGCAGAAAGCCAAGCAGATGTGGGGGCAGGGAGAGTCATCATCTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 90 bp | TCCTGCAGTTCCCCAGGGAATGCAGAGCACCTAGGCTTCTCTAGCTaGGTGGAGCATGTAACCCAGCTTGTTACAAAGTTGAACAAACGG | + |
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Preference number: 1 (lower is better) Translates to: SCSSPGNAEHLGFSS*VEHVTQLVTKLNKR Trigger: CCGTTTGTTCAACTTTGTAACAAGCTGGGTTACATGCTCCACGCAGCTAGAGAAGCCTAGGTGCTCTGCATTCCCTGGGGAACTGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 90 bp | CCCAGGATTCTGTTTGCATGTATCACACACTCCAAGGATTCTGTTTaGATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PRILFACITHSKDSV*MYHTLCRPCLLSRP Trigger: GGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCTTGGAGTGTGTGATACATGCAAACAGAATCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTTTAGTCACAGACTCTTaGAGCTTGAGCTCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSLVTDS*SLSSGE Trigger: CTCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAA...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACGTGGCCCCTGCAAGCTTCTaGCACCTGCCTGAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LSLVRGWALMSPEHSLDVAPASF*HLPEQE Trigger: CTCCTGCTCAGGCAGGTGTCAGAAGCTTGCAGGGGC...CACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACACTTCCGGAGGCCCCTTaGAGGACACCCGCCCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: GQPLVVKGETQERNALITLPEAP*RTPAHP Trigger: GGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAG...TGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGTTAGTCACAGACTCTTaGAGCTTGAGCTCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: KSPPSAAEGQRRVCCHQMLVTDS*SLSSGE Trigger: CTCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAA...CATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR-3UTR GCA 90 bp | CACACAGAAAGGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTGCGGCCACAGCCCCTaGAAGCTTCTGACACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: HTERPAISGEGGNAGKECCGHSP*KLLTPA Trigger: GGCAGGTGTCAGAAGCTTGCAGGGGCTGTGGCCGCA...GCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCCTTTCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR CAA 90 bp | AGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTaGCGGCCACAGCCCCTGCAAGCTTCTGACACCTGCCTGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGEGGNAGKECFNHR*RPQPLQASDTCLSR Trigger: CCTGCTCAGGCAGGTGTCAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR CAA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTaGGACGTGGCTTTTCACTGGGTCTTAGGACTGGGTATGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSLVRGWALMSPEHS*DVAFHWVLGLGMEL Trigger: CAGCTCCATACCCAGTCCTAAGACCCAGTGAAAAGCCACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACCACAGCCCTGTCAGCTaGCACAGAGTCTGTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: CLSLVRGWALMSPEHSLDHSPVS*HRVCVN Trigger: ATTCACACAGACTCTGTGTCAGCTGACAGGGCTGTG...GTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACAGGGTGAGATGCCAGTaGATGGGTCTTCTCCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLSLVRGWALMSPEHSLDRVRCQ*MGLLHS Trigger: ACTGTGGAGAAGACCCATTCACTGGCATCTCACCCT...GTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR GCA 90 bp | TACTTACAAACTAGGTTGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTAGGGGGACATTCCGCTCTGTaGCCACTGGGTAGGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: YLQTRLDSQIGGANGAVGGHSAL*PLGRVC Trigger: ACACACCCTACCCAGTGGGCACAGAGCGGAATGTCC...CCCTACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR CCA 90 bp | TACTTACAAACTAGGTTGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTAGGGGCCCAGAGCACAGTTTaGACGTGGCTTTTCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: YLQTRLDSQIGGANGAVGAQSTV*TWLFTG Trigger: CCCAGTGAAAAGCCACGTCCAAACTGTGCTCTGGGC...CCCTACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAATTAGTCACAGACTCTTaGAGCTTGAGCTCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: LLLQPSRESHKSPPSAAELVTDS*SLSSGE Trigger: CTCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAA...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR CAA 90 bp | GCCCAGGATTCTGTTTGCATGTATCACACACTCCAAGGATTCTGTTaGCATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AQDSVCMYHTLQGFC*HVSHTLSTLSVEQA Trigger: GGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCTTGGAGTGTGTGATACATGCAAACAGAATCCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR TCA 90 bp | GATTCTGTTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCCCAGCTTGTTACAAAGTTaGACAAACGGAGAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DSVCMYHTLCRPCLLSRPSLLQS*TNGEAL Trigger: GAGAGCTTCTCCGTTTGTTCAACTTTGTAACAAGCT...GGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR CCA 72 bp | AGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTaGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: RSASLCGLPEAP*RTPAHPSQRAP Trigger: TGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGGCTTCCGGAGGCCCCTaGGAGGACACCCGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: KSPPSAAEGQRRVCCHQMASGGP*EDTRPP Trigger: GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGC...CATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTTCCGGAGGCCCCTaGGAGGACACCCGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: AEKVINLRPRPQKGKGESASGGP*EDTRPP Trigger: GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGC...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR-3UTR CAA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCTTAGTCACAGACTCTaGAAGCTTGAGCTCAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: RIPLWASGGPLEDTRPPQLSHRL*KLELRR Trigger: TCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAAG...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR-3UTR CAA 90 bp | TACTTACAAACTAGGTTGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTAGGGGTGCCTGGTCCTCCTTaGATGCCCCACACAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: YLQTRLDSQIGGANGAVGVPGPP*MPHTAL Trigger: CAGGGCTGTGTGGGGCATCAAAGGAGGACCAGGCAC...CCCTACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | GGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTaGGGCCACAGCCCCTGCAAGCTTCTGACACCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GETQERNALITG*GHSPCKLLTPA Trigger: GGCAGGTGTCAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR TCA 72 bp | CCACATCCTTTCGGAATTCTCTTAGTCACAGACTCTTaGAGCTTGAGCTCAGGCGAGGTGGGGTGCCCGGAC | + |
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Preference number: 3 (lower is better) Translates to: PHPFGILLVTDS*SLSSGEVGCPD Trigger: GTCCGGGCACCCCACCTCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAAGAGAATTCCGAAAGGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR TCA 72 bp | GGGTATGGAGCTGGACAAGGAAGGGTGAGATGCCAGTaGATGGGTCTTCTCCACAGTGCCTGGTCCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GYGAGQGRVRCQ*MGLLHSAWSSF Trigger: AAAGGAGGACCAGGCACTGTGGAGAAGACCCATTCACTGGCATCTCACCCTTCCTTGTCCAGCTCCATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR TCA 72 bp | TTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTaGGCAGGCCCCACCCAGCACCTTCACACAGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: FACITHSVDPVC*AGPTQHLHTVA Trigger: GGCTACTGTGTGAAGGTGCTGGGTGGGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTTCCCCAGGGAATGCAGAGCACCTAGGCTTCTCTAGCTGCGTGGAGCATCTTAGTCACAGACTCTaGAAGCTTGAGCTCAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: CSSPGNAEHLGFSSCVEHLSHRL*KLELRR Trigger: TCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAAG...ATGCTCCACGCAGCTAGAGAAGCCTAGGTGCTCTGCATTCCCTGGGGAACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCTTAGTCACAGACTCTaGAAGCTTGAGCTCAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: GGNAGKECFNHRLRPQPLLSHRL*KLELRR Trigger: TCGCCTGAGCTCAAGCTTCAAGAGTCTGTGACTAAG...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR-3UTR CAA 90 bp | TACTTACAAACTAGGTTGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTAGGGAGCCCAGAGCACAGTTaGGACGTGGCTTTTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: YLQTRLDSQIGGANGAVGSPEHS*DVAFHW Trigger: CCAGTGAAAAGCCACGTCCAAACTGTGCTCTGGGCT...CCCTACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR TCA 72 bp | GTCTTAGGACTGGGTATGGAGCTGGACAAGGAAGGGTaGGATGCCAGTGAATGGGTCTTCTCCACAGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: VLGLGMELDKEG*DASEWVFSTVP Trigger: AGGCACTGTGGAGAAGACCCATTCACTGGCATCTCACCCTTCCTTGTCCAGCTCCATACCCAGTCCTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | GCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATaGTTTAATCACAGGTTGCGGCCACAGCCCCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: AISGEGGNAGKE*FNHRLRPQPLQ Trigger: TTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR GCA 72 bp | GATGACTCTCCCTGCCCCCACATCTGCTTGGCTTTCTaGCCCTGTTGTGTACTGACCCTCAAACTAACTCCT | + |
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Preference number: 3 (lower is better) Translates to: DDSPCPHICLAF*PCCVLTLKLTP Trigger: AGGAGTTAGTTTGAGGGTCAGTACACAACAGGGGCAGAAAGCCAAGCAGATGTGGGGGCAGGGAGAGTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR CCA 72 bp | GTCACCGTGGTCCTTAGCTTTTCAGGTTGTAAGGTATaGCCTGTAGCTTGTAGCTGCTCTGGACCCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: VTVVLSFSGCKV*PVACSCSGPSG Trigger: GCCTGAGGGTCCAGAGCAGCTACAAGCTACAGGCCATACCTTACAACCTGAAAAGCTAAGGACCACGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR CCA 72 bp | ATGAGCCCAGAGCACAGTTTGGACGTGGCTTTTCACTaGGTCTTAGGACTGGGTATGGAGCTGGACAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: MSPEHSLDVAFH*VLGLGMELDKE Trigger: TTCCTTGTCCAGCTCCATACCCAGTCCTAAGACCCAGTGAAAAGCCACGTCCAAACTGTGCTCTGGGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | CTGTTTGCATGTATCACACACTCCAAGGATTCTGTTTaGATGTATCACACACTCTGTCGACCCTGTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: LFACITHSKDSV*MYHTLCRPCLL Trigger: CAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCTTGGAGTGTGTGATACATGCAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | AGGCTGCAAGCAGTATCTACACCCATATTTAAAATCTaGCCCACTTTACAGGGAAGGTCTCAAGTGATTGAC | + |
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Preference number: 3 (lower is better) Translates to: RLQAVSTPIFKI*PTLQGRSQVID Trigger: GTCAATCACTTGAGACCTTCCCTGTAAAGTGGGGCAGATTTTAAATATGGGTGTAGATACTGCTTGCAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | GAATCAATGAACCACAACCAAAATTCCTGCGAAGGCTaGAAGCAGTATCTACACCCATATTTAAAATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: ESMNHNQNSCEG*KQYLHPYLKSA Trigger: GGCAGATTTTAAATATGGGTGTAGATACTGCTTGCAGCCTTCGCAGGAATTTTGGTTGTGGTTCATTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR GCA 72 bp | AGTCTGTGTGAATCAATGAACCACAACCAAAATTCCTaGGAAGGCTGCAAGCAGTATCTACACCCATATTTA | + |
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Preference number: 3 (lower is better) Translates to: SLCESMNHNQNS*EGCKQYLHPYL Trigger: TAAATATGGGTGTAGATACTGCTTGCAGCCTTCGCAGGAATTTTGGTTGTGGTTCATTGATTCACACAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR TCA 72 bp | CCCACTTTACAGGGAAGGTCTCAAGTGATTGACAGCTaGGCCTGTGAGAATACAAATATTGTCTTAAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PTLQGRSQVIDS*ACENTNIVLKR Trigger: TCTTTTTAAGACAATATTTGTATTCTCACAGGCTCAGCTGTCAATCACTTGAGACCTTCCCTGTAAAGTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR GCA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCATGTTCGATCAGCCACTaGCGCAGCCGCCGCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPCSISH*RSRRPP Trigger: CGGCGGGCGGCGGCTGCGGCAGTGGCTGATCGAACA...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACCCACCGCGTTGCCGCTaGAGAACACGCGGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GFRRPLGGHPPTPVRGLHPPRCR*RTRGPG Trigger: GCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGG...GTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCAGGTGGTGGTGGCCTaGCCCACCAGCTTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQQVVVA*PTSLPP Trigger: CGGGGGCAAGCTGGTGGGCCAGGCCACCACCACCTG...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACCAGGTGGTGGTGGCCTaGCCCACCAGCTTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFRRPLGGHPPTPVRGLHQVVVA*PTSLPP Trigger: CGGGGGCAAGCTGGTGGGCCAGGCCACCACCACCTG...GTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGACCACCGCGTTGCCGCTaGAGAACACGCGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRPPRCR*RTRGPG Trigger: GCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGG...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATTGTTCGATCAGCCACTaGCGCAGCCGCCGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPEAPWRTPAHPSQRAPHCSISH*RSRRPP Trigger: CGGCGGGCGGCGGCTGCGGCAGTGGCTGATCGAACA...ATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGAGGCCTGCACTGGGCTaGTGGACCCACCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQRPALG*WTHQSG Trigger: CCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGGCCT...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCTGCACACCACCGCGTTaGCGCTGCAGAACACGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERIPLWASGGPLEDTRPPCTPPR*RCRTRG Trigger: GCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCA...GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCCTGCACTGGGCTGCTaGACCCACCAGTCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQPALGC*THQSGR Trigger: CCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGG...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCATTAGGCAGCCCCGGCTaGCTCAGGGAGAGACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPLGSPG*LRERRQ Trigger: CTGCCGTCTCTCCCTGAGCCAGCCGGGGCTGCCTAA...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTGGGCTCCTCCAGGGCTaGCATCAGGGAGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSGLLQG*HQGAST Trigger: GGTGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCC...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGAGGCCTGCACTGGGCTaGTGGACCCACCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGFRRPLGGHPPTPVRGRPALG*WTHQSG Trigger: CCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGGCCT...CCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGTGCACACCACCGCGTTaGCGCTGCAGAACACGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGFRRPLGGHPPTPVRGCTPPR*RCRTRG Trigger: GCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCA...CCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCCAGCTTGTTGGGCCTaGCCTTGCACACCACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQPACWA*PCTPPR Trigger: ACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGG...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACCCAGCTTGTTGGGCCTaGCCTTGCACACCACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFRRPLGGHPPTPVRGLHPACWA*PCTPPR Trigger: ACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGG...GTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGTTAGGCAGCCCCGGCTaGCTCAGGGAGAGACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGFRRPLGGHPPTPVRGLGSPG*LRERRQ Trigger: CTGCCGTCTCTCCCTGAGCCAGCCGGGGCTGCCTAA...CCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCACCCGCTCCAGCTTGTTaGGCCTGCCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPPAPAC*ACPCTP Trigger: TGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGG...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR GCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGAGCACAGGACCACCCTaGTGTCAGGTAGGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQSTGPP*CQVGGS Trigger: AGAGCCGCCTACCTGACAGCAGGGTGGTCCTGTGCT...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCAGTCAGGGAGGATCTaGCTCCTGCAGGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAHPSVGFRRPLGGHPPTQSGRI*LLQASG Trigger: ACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTG...GGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCAGTCAGGGAGGATCTaGCTCCTGCAGGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQQSGRI*LLQASG Trigger: ACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTG...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCAGAACACGCGGCCCTaGCACAGCCGCTTCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVGFRRPLGGHPPTPVRGQNTRP*HSRFTN Trigger: GTTCGTGAAGCGGCTGTGCCAGGGCCGCGTGTTCTG...CCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGTTCGCTCATGCAGCCTaGAGGTGCCACGCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVGFRRPLGGHPPTPVRGFAHAA*RCHAQL Trigger: AAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAA...CCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCAGCCTTCAAGGCAGGTaGTGGTGGCCTGGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FRRPLGGHPPTPVRGLHISLQGR*WWPGPP Trigger: TGGTGGGCCAGGCCACCACCACCTGCCTTGAAGGCT...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCACCTCCACCAGCTGCCTaGCATACAGCTGCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPPPPAA*HTAALP Trigger: AGGTAGAGCAGCTGTATGCCAGGCAGCTGGTGGAGG...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCAGCACAGGACCACCCTaGTGTCAGGTAGGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRRPLGGHPPTPVRGLHISTGPP*CQVGGS Trigger: AGAGCCGCCTACCTGACAGCAGGGTGGTCCTGTGCT...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCAGCTTCCTCCACCAGCTaGCTGGCATACAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QERIPLWASGGPLEDTRPASSTS*LAYSCS Trigger: AGAGCAGCTGTATGCCAGGCAGCTGGTGGAGGAAGC...TGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTGCTTCCTCCACCAGCTaGCTGGCATACAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSASSTS*LAYSCS Trigger: AGAGCAGCTGTATGCCAGGCAGCTGGTGGAGGAAGC...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR TCA 90 bp | CAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACTACCTGCACCAGAATaGGTTTGGAGCGCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QERIPLWASGGPLEDTRPLPAPE*VWSARA Trigger: TGCCCTTGCGCTCCAAACTCATTCTGGTGCAGGTAG...TGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGATCACGAACACGCCCTTaGGGTTGCTGTGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRSRTRP*GCCAVA Trigger: TGCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGA...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCATCACGAACACGCCCTTaGGGTTGCTGTGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QERIPLWASGGPLEDTRPSRTRP*GCCAVA Trigger: TGCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGA...TGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACGTGCCACCGCGTTGCCGCTaGAGAACACGCGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLVRGWALMSPEHSLDVPPRCR*RTRGPG Trigger: GCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGG...CACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR GCA 90 bp | GAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCAGATATCCGGAAACATaGGGAAAGCCTGGTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERIPLWASGGPLEDTRPPRYPET*GKPGPA Trigger: AGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCT...GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACGTGCAGGTGGTGGTGGCCTaGCCCACCAGCTTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVRGWALMSPEHSLDVQVVVA*PTSLPP Trigger: CGGGGGCAAGCTGGTGGGCCAGGCCACCACCACCTG...CACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CCA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCCCTCCACCAGCTGCCTaGCATACAGCTGCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FRRPLGGHPPTPVRGLHIPPPAA*HTAALP Trigger: AGGTAGAGCAGCTGTATGCCAGGCAGCTGGTGGAGG...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR TCA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAAAACTGCCCAGGCCTTaGAGATGGAAGCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRKLPRP*RWKHPP Trigger: AGGTGGATGCTTCCATCTTCAAGGCCTGGGCAGTTT...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGATGCCTGGCATACAGCTaGTCTACCTGCACCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRCLAYS*STCTRM Trigger: CATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCA...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCTCAGAAATGTCCAGCTaGGACCGGTCAGTCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERIPLWASGGPLEDTRPPSEMSS*DRSVTS Trigger: AGAAGTGACTGACCGGTCCCAGCTGGACATTTCTGA...GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | AAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGCTTCAAGGCAGGTGGTaGTGGCCTGGCCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPPSAAEGQRRVCCHQMLQGRW*WPGPPA Trigger: AGCTGGTGGGCCAGGCCACCACCACCTGCCTTGAAG...CATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCGTGCCACGCCCAGCTTaGATTTTTGTTCTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FRRPLGGHPPTPVRGLHIVPRPA*IFVLPR Trigger: CCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCAC...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCACCTCGTCTTCCACGTaGCTGGTTCAGCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRRPLGGHPPTPVRGLHITSSST*LVQLCL Trigger: GAGACAAAGCTGAACCAGCCACGTGGAAGACGAGGT...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGGGGCTCCTCCAGGGCTaGCATCAGGGAGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLGLLQG*HQGAST Trigger: GGTGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCC...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTTGCACACCACCGCGTTaGCGCTGCAGAACACGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEKVINLRPRPQKGKGESCTPPR*RCRTRG Trigger: GCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCA...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | CGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGAGGGGATACGGAACATaGTCTTCTCATCATTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIPLWASGGPLEDTRPPQRGYGT*SSHHFP Trigger: GGGAAAATGATGAGAAGACCATGTTCCGTATCCCCT...CTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACAGCCTTCAAGGCAGGTaGTGGTGGCCTGGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSLVRGWALMSPEHSLDSLQGR*WWPGPP Trigger: TGGTGGGCCAGGCCACCACCACCTGCCTTGAAGGCT...GTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCAAAGCCTGGTCCGGCTaGGGCTCCTCCAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPKAWSG*GSSRAG Trigger: GCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTT...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACGTGTTCGCTCATGCAGCCTaGAGGTGCCACGCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVRGWALMSPEHSLDVFAHAA*RCHAQL Trigger: AAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAA...CACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR GCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAGCACCGCAGCTCTTaGCCGCTTCCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLQHRSS*PLPPPA Trigger: AGCTGGTGGAGGAAGCGGGCAAGAGCTGCGGTGCTG...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAAGGGGATACGGAACATaGTCTTCTCATCATTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRRGYGT*SSHHFP Trigger: GGGAAAATGATGAGAAGACCATGTTCCGTATCCCCT...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCTTCAAGGCAGGTGGTaGTGGCCTGGCCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLLQGRW*WPGPPA Trigger: AGCTGGTGGGCCAGGCCACCACCACCTGCCTTGAAG...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGAAAGCCTGGTCCGGCTaGGGCTCCTCCAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLKAWSG*GSSRAG Trigger: GCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTT...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACATGTTCGATCAGCCACTaGCGCAGCCGCCGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQPLVVKGETQERNALITCSISH*RSRRPP Trigger: CGGCGGGCGGCGGCTGCGGCAGTGGCTGATCGAACA...TGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGAGCACAGGACCACCCTaGTGTCAGGTAGGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLSTGPP*CQVGGS Trigger: AGAGCCGCCTACCTGACAGCAGGGTGGTCCTGTGCT...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCAGCACCGCAGCTCTTaGCCGCTTCCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPQHRSS*PLPPPA Trigger: AGCTGGTGGAGGAAGCGGGCAAGAGCTGCGGTGCTG...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCTCGGTAAACTTTATATaGCTCAGAAATGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERIPLWASGGPLEDTRPPSVNFI*LRNVQL Trigger: CAGCTGGACATTTCTGAGCCATATAAAGTTTACCGA...GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CACACAGAAAGGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCCCTGCACTGGGCTGCTaGACCCACCAGTCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTERPAISGEGGNAGKECPALGC*THQSGR Trigger: CCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGG...GCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCCTTTCTGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGCCTGCACTGGGCTGCTaGACCCACCAGTCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLPALGC*THQSGR Trigger: CCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGG...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGTTAGGCAGCCCCGGCTaGCTCAGGGAGAGACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLLGSPG*LRERRQ Trigger: CTGCCGTCTCTCCCTGAGCCAGCCGGGGCTGCCTAA...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCTCCTCCAGGGCTaGCATCAGGGAGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQPSRESHKSPPSAAEGLLQG*HQGAST Trigger: GGTGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCC...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGCCAGCTTGTTGGGCCTaGCCTTGCACACCACCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLPACWA*PCTPPR Trigger: ACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGG...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGGCTTCCTCCACCAGCTaGCTGGCATACAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLASSTS*LAYSCS Trigger: AGAGCAGCTGTATGCCAGGCAGCTGGTGGAGGAAGC...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CACACAGAAAGGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCCAGCACCGCAGCTCTTaGCCGCTTCCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTERPAISGEGGNAGKECQHRSS*PLPPPA Trigger: AGCTGGTGGAGGAAGCGGGCAAGAGCTGCGGTGCTG...GCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCCTTTCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCACTTCTTCAAAATCTaGGCTCTTGTTCAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPEAPWRTPAHPSQRAPHHFFKI*ALVQST Trigger: TGTGCTCTGAACAAGAGCCCAGATTTTGAAGAAGTG...ATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCATCGGTAAACTTTATATaGCTCAGAAATGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QERIPLWASGGPLEDTRPSVNFI*LRNVQL Trigger: CAGCTGGACATTTCTGAGCCATATAAAGTTTACCGA...TGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | AAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGGGGATGGGCTCCTCTTaGTCATACCCATGTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPPSAAEGQRRVCCHQMGMGSS*SYPCTH Trigger: ATGAGTACATGGGTATGACCAAGAGGAGCCCATCCC...CATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | TACTTACAAACTAGGTTGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTAGGGCTTCAAGGCAGGTGGTaGTGGCCTGGCCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLQTRLDSQIGGANGAVGLQGRW*WPGPPA Trigger: AGCTGGTGGGCCAGGCCACCACCACCTGCCTTGAAG...CCCTACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CCA 90 bp | CACACAGAAAGGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCCAGAACACGCGGCCCTaGCACAGCCGCTTCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTERPAISGEGGNAGKECQNTRP*HSRFTN Trigger: GTTCGTGAAGCGGCTGTGCCAGGGCCGCGTGTTCTG...GCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCCTTTCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGCCCGCTCCAGCTTGTTaGGCCTGCCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLPAPAC*ACPCTP Trigger: TGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGG...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGCAGGAACTTCGCTCATaGAGCCTGCAGGTGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLQELRS*SLQVPR Trigger: GCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTG...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTTCACGAACACGCCCTTaGGGTTGCTGTGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEKVINLRPRPQKGKGESSRTRP*GCCAVA Trigger: TGCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGA...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACTGCCTGGCATACAGCTaGTCTACCTGCACCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLVRGWALMSPEHSLDCLAYS*STCTRM Trigger: CATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCA...GTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAAGCCTTCAAGGCAGGTaGTGGTGGCCTGGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQPSRESHKSPPSAAESLQGR*WWPGPP Trigger: TGGTGGGCCAGGCCACCACCACCTGCCTTGAAGGCT...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR CAA 72 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTaGCGGCCACAGCCCCTGCAAGCTTCTGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHR*RPQPLQASDTC Trigger: GCAGGTGTCAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGATTGTAATCCTGCTTaGCGGCATGCTTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEKVINLRPRPQKGKGESDCNPA*RHASRG Trigger: TCCCCTGGAAGCATGCCGGCAAGCAGGATTACAATC...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTAGGCCTGCACTGGGCTaGTGGACCCACCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVKGETQERNALITGRPALG*WTHQSG Trigger: CCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGGCCT...ACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGAGATATCCGGAAACATaGGGAAAGCCTGGTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLRYPET*GKPGPA Trigger: AGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCT...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCGTCTTCCACGTGGCTaGTTCAGCTTTGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPRLPRG*FSFVSL Trigger: GAGGGAGACAAAGCTGAACCAGCCACGTGGAAGACG...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGTCAGCCCCGGGTACATaGTGCTGTCGATCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLSAPGT*CCRSVR Trigger: TCGAACAGATCGACAGCAGCATGTACCCGGGGCTGA...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCGATTGTAATCCTGCTTaGCGGCATGCTTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPDCNPA*RHASRG Trigger: TCCCCTGGAAGCATGCCGGCAAGCAGGATTACAATC...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTCAGAACACGCGGCCCTaGCACAGCCGCTTCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVKGETQERNALITGQNTRP*HSRFTN Trigger: GTTCGTGAAGCGGCTGTGCCAGGGCCGCGTGTTCTG...ACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | AAGATTCTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCCCCGCTCCAGCTTGTTaGGCCTGCCCTTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: KILLLQPSRESHKSPPSAPAPAC*ACPCTP Trigger: TGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGG...GGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAGAATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAACTACCTGCACCAGAATaGGTTTGGAGCGCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQPSRESHKSPPSAAELPAPE*VWSARA Trigger: TGCCCTTGCGCTCCAAACTCATTCTGGTGCAGGTAG...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR GCA 90 bp | GATTCTGTTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCCCTCAGCCCCGGGTACATaGTGCTGTCGATCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DSVCMYHTLCRPCLLSRPSAPGT*CCRSVR Trigger: TCGAACAGATCGACAGCAGCATGTACCCGGGGCTGA...GGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGGATTGTAATCCTGCTTaGCGGCATGCTTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QERNALITGCGHSPCKLLDCNPA*RHASRG Trigger: TCCCCTGGAAGCATGCCGGCAAGCAGGATTACAATC...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR GCA 90 bp | AAGATTCTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCCAGGAACTTCGCTCATaGAGCCTGCAGGTGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KILLLQPSRESHKSPPSAQELRS*SLQVPR Trigger: GCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTG...GGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAGAATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAACGTCTTCCACGTGGCTaGTTCAGCTTTGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQPSRESHKSPPSAAERLPRG*FSFVSL Trigger: GAGGGAGACAAAGCTGAACCAGCCACGTGGAAGACG...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCGGGATGGGCTCCTCTTaGTCATACCCATGTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPGMGSS*SYPCTH Trigger: ATGAGTACATGGGTATGACCAAGAGGAGCCCATCCC...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTCAGTCAGGGAGGATCTaGCTCCTGCAGGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVKGETQERNALITGQSGRI*LLQASG Trigger: ACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTG...ACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACACCTCCACCAGCTGCCTaGCATACAGCTGCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GQPLVVKGETQERNALITPPPAA*HTAALP Trigger: AGGTAGAGCAGCTGTATGCCAGGCAGCTGGTGGAGG...TGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| 3UTR CAA 72 bp | AGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGATTaGAACTGTCGAAAGACCTCAGCACACAGAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRAKASLLPPDD*NCRKTSAHRKA Trigger: GGCCTTTCTGTGTGCTGAGGTCTTTCGACAGTTCAAATCATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR TCA 90 bp | GATTCTGTTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCCCAAACTGCCCAGGCCTTaGAGATGGAAGCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DSVCMYHTLCRPCLLSRPKLPRP*RWKHPP Trigger: AGGTGGATGCTTCCATCTTCAAGGCCTGGGCAGTTT...GGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTAGGGGATACGGAACATaGTCTTCTCATCATTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEKVINLRPRPQKGKGESRGYGT*SSHHFP Trigger: GGGAAAATGATGAGAAGACCATGTTCCGTATCCCCT...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGAAGCTGATGACCATCTaGGAGAAAGCTGAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGNAGKECFNHRLRPQPLKLMTI*EKAEWC Trigger: ACACCATTCAGCTTTCTCCCAGATGGTCATCAGCTT...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGGTGCCACGCCCAGCTTaGATTTTTGTTCTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAISGEGGNAGKECFNHRVPRPA*IFVLPR Trigger: CCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCAC...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACATGCCTGGCATACAGCTaGTCTACCTGCACCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GQPLVVKGETQERNALITCLAYS*STCTRM Trigger: CATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCA...TGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGACCTCGTCTTCCACGTaGCTGGTTCAGCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAISGEGGNAGKECFNHRTSSST*LVQLCL Trigger: GAGACAAAGCTGAACCAGCCACGTGGAAGACGAGGT...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTCACTTCTTCAAAATCTaGGCTCTTGTTCAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AEKVINLRPRPQKGKGESHFFKI*ALVQST Trigger: TGTGCTCTGAACAAGAGCCCAGATTTTGAAGAAGTG...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTCCAACCAAGCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAATCAGAAATGTCCAGCTaGGACCGGTCAGTCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQPSRESHKSPPSAAESEMSS*DRSVTS Trigger: AGAAGTGACTGACCGGTCCCAGCTGGACATTTCTGA...TTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGCTTGGTTGGAGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CCA 90 bp | GATTCTGTTTGCATGTATCACACACTCTGTCGACCCTGTCTGTTGAGCAGGCCCGGGATGGGCTCCTCTTaGTCATACCCATGTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSVCMYHTLCRPCLLSRPGMGSS*SYPCTH Trigger: ATGAGTACATGGGTATGACCAAGAGGAGCCCATCCC...GGGCCTGCTCAACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CCA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCAAGCTGATGACCATCTaGGAGAAAGCTGAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGGNAGKECFNHRLRPQPKLMTI*EKAEWC Trigger: ACACCATTCAGCTTTCTCCCAGATGGTCATCAGCTT...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| 3UTR CAA 72 bp | AGCTGCGTGGAGCATGTAACCCAGCTTGTTACAAAGTaGAACAAACGGAGAAGCTCTCCTTCTCTCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SCVEHVTQLVTK*NKRRSSPSLRQ Trigger: TTGTCTGAGAGAAGGAGAGCTTCTCCGTTTGTTCAACTTTGTAACAAGCTGGGTTACATGCTCCACGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR CAA 72 bp | GCTATAGTCACTGATTTAGATTACTTACAAACTAGGTaGGACAGCCAGATTGGGGGCGCAAATGGTGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIVTDLDYLQTR*DSQIGGANGAV Trigger: TACCGCACCATTTGCGCCCCCAATCTGGCTGTCCAACCTAGTTTGTAAGTAATCTAAATCAGTGACTATAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| 3UTR CAA 72 bp | TCTGTTTGCATGTATCACACACTCCAAGGATTCTGTTaGCATGTATCACACACTCTGTCGACCCTGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVCMYHTLQGFC*HVSHTLSTLSV Trigger: AACAGACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCTTGGAGTGTGTGATACATGCAAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CAA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCATCGTCCCGCTCCAGCTaGTTGGGCCTGCCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPSSRSS*LGLPLH Trigger: GTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGA...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTTTGCACACCACCGCGTaGCCGCTGCAGAACACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSLHTTA*PLQNTR Trigger: CCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAA...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTTTGTTGGGCCTGCCCTaGCACACCACCGCGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSLLGLP*HTTALP Trigger: CGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAA...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGATCGTCCCGCTCCAGCTaGTTGGGCCTGCCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSVGFRRPLGGHPPTPVRSSRSS*LGLPLH Trigger: GTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGA...TCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 90 bp | CGTCCCGCTCCAGCTTGTTGGGCCTGCCCTTGCACACCACCGCGTTaGCGCTGCAGAACACGCGGCCCTGGCACAGCCGCTTCACGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RPAPACWACPCTPPR*RCRTRGPGTAASRT Trigger: TGTTCGTGAAGCGGCTGTGCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 90 bp | ACGGGTTCCAGGCCATCCGGCCCATACAACTTAGGCAGCCCCGGCTaGCTCAGGGAGAGACGGCAGCCTTCAAGGCAGGTGGTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGSRPSGPYNLGSPG*LRERRQPSRQVVVA Trigger: GGCCACCACCACCTGCCTTGAAGGCTGCCGTCTCTCCCTGAGCCAGCCGGGGCTGCCTAAGTTGTATGGGCCGGATGGCCTGGAACCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCTTCACGAACACGCCCTaGCGGTTGCTGTGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERIPLWASGGPLEDTRPPFTNTP*RLLCSS Trigger: GCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGAA...GGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 90 bp | AGTAGCACGCCACGTTCCAGGTGCCCAAACAGCTTCCGGGTCACCTaGCTCTGCCGCTCACTGGGGATGGTGTCGGCCGTCGGAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTPRSRCPNSFRVT*LCRSLGMVSAVGKH Trigger: GTGCTTTCCGACGGCCGACACCATCCCCAGTGAGCGGCAGAGGCAGGTGACCCGGAAGCTGTTTGGGCACCTGGAACGTGGCGTGCTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 90 bp | GGTTGGTGTCAAAGACCTGCACCACCTCGTCCCGCTCCAGCTTGTTaGGCCTGCCCTTGCACACCACCGCGTTGCCGCTGCAGAACACGC | + |
|
Preference number: 5 (lower is better) Translates to: GWCQRPAPPRPAPAC*ACPCTPPRCRCRTR Trigger: GCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGAGGTGGTGCAGGTCTTTGACACCAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTGGTGCCACGCCCAGCTaGCATTTTTGTTCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSGATPS*HFCSSS Trigger: CGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACC...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | TTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATCTTCACGAACACGCCCTaGCGGTTGCTGTGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRRPLGGHPPTPVRGLHIFTNTP*RLLCSS Trigger: GCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGAA...GATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | AAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGCTGCCACCAGATGTCGTCCCGCTCCAGCTaGTTGGGCCTGCCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSPPSAAEGQRRVCCHQMSSRSS*LGLPLH Trigger: GTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGA...CATCTGGTGGCAGCAGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTTGCACCAGAATGAGTTaGGAGCGCAAGGGCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSCTRMS*ERKGTV Trigger: CACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCA...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 90 bp | CTGCACTGGGCTGCTGGACCCACCAGTCAGGGAGGATCTGGCTCCTaGAGGCCTCTGGTGGGGATGGGCTCCTCTTGGTCATACCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LHWAAGPTSQGGSGS*RPLVGMGSSWSYPC Trigger: ACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CCA 90 bp | TGTGAGGTACAGATATCCGGAAACATGCGGAAAGCCTGGTCCGGCTaGGGCTCCTCCAGGGCTGGCATCAGGGAGCCAGCACCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CEVQISGNMRKAWSG*GSSRAGIREPAPQL Trigger: GAGCTGCGGTGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCTGTACCTCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGCCCAGCTTGCATTTTaGTTCTTCCTCGGGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: AHPSVGFRRPLGGHPPTPAQLAF*FFLGDN Trigger: ATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGC...TGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTCAGAGGGCTCCACATGGTGCCACGCCCAGCTaGCATTTTTGTTCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPEAPWRTPAHPSQRAPHGATPS*HFCSSS Trigger: CGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACC...ATGTGGAGCCCTCTGACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS GCA 90 bp | ATGGTGTGTGTCATAGGCGGCATATCCGGTCACCAGTGGCAGGCCTaGACTGGGCTGCTGGACCCACCAGTCAGGGAGGATCTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MVCVIGGISGHQWQA*TGLLDPPVREDLAP Trigger: AGGAGCCAGATCCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGGCCTGCCACTGGTGACCGGATATGCCGCCTATGACACACACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CCA 90 bp | GGTCTCTGGTGTGAGGTACAGATATCCGGAAACATGCGGAAAGCCTaGTCCGGCTGGGGCTCCTCCAGGGCTGGCATCAGGGAGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLWCEVQISGNMRKA*SGWGSSRAGIREPA Trigger: TGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCTGTACCTCACACCAGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCACCCCAGTGCCCAGCTTGCATTTTaGTTCTTCCTCGGGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASLCGLPEAPWRTPAHPSAQLAF*FFLGDN Trigger: ATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGC...ACTGGGGTGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CTTTCCCTGGTACGTGGGTGGGCACTGATGAGCCCAGAGCACAGTTTGGACGTGTTGTTGGGCCTGCCCTaGCACACCACCGCGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVRGWALMSPEHSLDVLLGLP*HTTALP Trigger: CGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAA...CACGTCCAAACTGTGCTCTGGGCTCATCAGTGCCCACCCACGTACCAGGGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS-3UTR CAA 90 bp | CAGGAGCGCATCCCTCTGTGGGCTTCCGGAGGCCCCTTGGAGGACACCCGCCCATCCACAGAAGGTTCCTaGATCAGCTCCTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QERIPLWASGGPLEDTRPSTEGS*ISSSIS Trigger: AGAGATTGAGGAGCTGATCAAGGAACCTTCTGTGGA...TGGGCGGGTGTCCTCCAAGGGGCCTCCGGAAGCCCACAGAGGGATGCGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS TCA 90 bp | CAGGTAGGCGGCTCTGGGTGGCGTAGAATTGCTGCAGCTCTCGGATaGACTGGTTGGTGTCAAAGACCTGCACCACCTCGTCCCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVGGSGWRRIAAALG*TGWCQRPAPPRPAP Trigger: TGGAGCGGGACGAGGTGGTGCAGGTCTTTGACACCAACCAGTTCATCCGAGAGCTGCAGCAATTCTACGCCACCCAGAGCCGCCTACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCTTGCACACCACCGCGTaGCCGCTGCAGAACACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGGNAGKECFNHRLRPQPLHTTA*PLQNTR Trigger: CCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAA...GGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 90 bp | CCACCAGTCAGGGAGGATCTGGCTCCTGCAGGCCTCTGGTGGGGATaGGCTCCTCTTGGTCATACCCATGTACTCATCCACAGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPVREDLAPAGLWWG*APLGHTHVLIHRRF Trigger: GAACCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS CCA 90 bp | CCACCAGTCAGGGAGGATCTGGCTCCTGCAGGCCTCTGGTGGGGATaGGCTCCTCTTGGTCATACCCATGTACTCATCCACAGAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPVREDLAPAGLWWG*APLGHTHVLIHRRL Trigger: AAGCCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160943.3 ENSMUST00000162658.8 |
||
| CDS GCA 90 bp | GCGGCCACACTCCATCTCAGGAACTTCGCTCATGCAGCCTGCAGGTaGCACGCCCAGCTTGCATTTTTGTTCTTCCTCGGGGACAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: AATLHLRNFAHAACR*HAQLAFLFFLGDNS Trigger: CGAATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGATGGAGTGTGGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTTTCACGAACACGCCCTaGCGGTTGCTGTGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AEKVINLRPRPQKGKGESFTNTP*RLLCSS Trigger: GCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGAA...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCACACCACCGCGTaGCCGCTGCAGAACACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PAISGEGGNAGKECFNHRLHTTA*PLQNTR Trigger: CCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAA...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGTTGGGCCTGCCCTaGCACACCACCGCGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PAISGEGGNAGKECFNHRLLGLP*HTTALP Trigger: CGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAA...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGTGCACCAGAATGAGTTaGGAGCGCAAGGGCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGNAGKECFNHRLRPQPLCTRMS*ERKGTV Trigger: CACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCA...CAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS TCA 90 bp | CAGCTTGCCCCCGTAGTAGAAGCTGATGACCATCTGGGAGAAAGCTaGATGGTGTGTGTCATAGGCGGCATATCCGGTCACCAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLAPVVEADDHLGES*MVCVIGGISGHQWQ Trigger: CTGCCACTGGTGACCGGATATGCCGCCTATGACACACACCATTCAGCTTTCTCCCAGATGGTCATCAGCTTCTACTACGGGGGCAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS GCA 90 bp | CCTCAATCTCTGAGCGGCCACACTCCATCTCAGGAACTTCGCTCATaGAGCCTGCAGGTGCCACGCCCAGCTTGCATTTTTGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQSLSGHTPSQELRS*SLQVPRPACIFVLP Trigger: AGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGATGGAGTGTGGCCGCTCAGAGATTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS TCA 90 bp | CATGTACTCATCCACAGAAGGTTCCTTGATCAGCTCCTCAATCTCTaGGCGGCCACACTCCATCTCAGGAACTTCGCTCATGCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HVLIHRRFLDQLLNL*AATLHLRNFAHAAC Trigger: GCAGGCTGCATGAGCGAAGTTCCTGAGATGGAGTGTGGCCGCTCAGAGATTGAGGAGCTGATCAAGGAACCTTCTGTGGATGAGTACATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTGTGGCTGGTTCAGCTTaGTCTCCCTCTTTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AEKVINLRPRPQKGKGESVAGSA*SPSLNF Trigger: GAAGTTTAAAGAGGGAGACAAAGCTGAACCAGCCAC...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGAAAGTCATAAATCTCCGCCCTCGGCCGCAGAAGGGCAAAGGCGAGTCTTCAAAATCTGGGCTCTaGTTCAGAGCACAGCGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AEKVINLRPRPQKGKGESSKSGL*FRAQRN Trigger: GTTACGCTGTGCTCTGAACAAGAGCCCAGATTTTGA...AGACTCGCCTTTGCCCTTCTGCGGCCGAGGGCGGAGATTTATGACTTTCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTGCACCAGAATGAGTTaGGAGCGCAAGGGCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAISGEGGNAGKECFNHRCTRMS*ERKGTV Trigger: CACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCA...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAAGGAATGCTTTAATCACAGGTTGCGGCCACAGCCCCTGCAAGCTTCTGTCATCCACAGAAGGCTaGAAGATGGAAGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QERNALITGCGHSPCKLLSSTEG*KMEAST Trigger: GGTGGATGCTTCCATCTTCAAGCCTTCTGTGGATGA...CAGAAGCTTGCAGGGGCTGTGGCCGCAACCTGTGATTAAAGCATTCCTTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160943.3 |
||
| CDS TCA 90 bp | ATGGGCTCCTCTTGGTCATACCCATGTACTCATCCACAGAAGGCTTaGAGATGGAAGCATCCACCTCCTGATTGTAATCCTGCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MGSSWSYPCTHPQKA*RWKHPPPDCNPACR Trigger: CCGGCAAGCAGGATTACAATCAGGAGGTGGATGCTTCCATCTTCAAGCCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160943.3 ENSMUST00000162658.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGAAAACTGCCCAGGCCTaGAAGATGGAAGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PAISGEGGNAGKECFNHRKTAQA*KMEAST Trigger: GGTGGATGCTTCCATCTTCAAGGCCTGGGCAGTTTT...CCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS GCA 90 bp | TCTCAGGAACTTCGCTCATGCAGCCTGCAGGTGCCACGCCCAGCTTaGATTTTTGTTCTTCCTCGGGGACAATTCGGTAAACTTTATATG | + |
|
Preference number: 5 (lower is better) Translates to: SQELRSCSLQVPRPA*IFVLPRGQFGKLYM Trigger: CATATAAAGTTTACCGAATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | CAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGGTAAAACTGCCCAGGCCTaGAAGATGGAAGCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QPLVVKGETQERNALITGKTAQA*KMEAST Trigger: GGTGGATGCTTCCATCTTCAAGGCCTGGGCAGTTTT...ACCTGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGCCATTAGTGGTGAAGGGGGAAACGCAGGAAAGGAATGCTTTAATCACAGTGGCTGGTTCAGCTTaGTCTCCCTCTTTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQPLVVKGETQERNALITVAGSA*SPSLNF Trigger: GAAGTTTAAAGAGGGAGACAAAGCTGAACCAGCCAC...TGTGATTAAAGCATTCCTTTCCTGCGTTTCCCCCTTCACCACTAATGGCTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGTTGAACAAACGGAGAAGCTCTCCTTCTCTCAGACAAAAGCAGATGATGTCCACAGAAGGTTCCTaGATCAGCTCCTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKLNKRRSSPSLRQKQMMSTEGS*ISSSIS Trigger: AGAGATTGAGGAGCTGATCAAGGAACCTTCTGTGGA...CATCATCTGCTTTTGTCTGAGAGAAGGAGAGCTTCTCCGTTTGTTCAACTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047737.10 |
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| CDS CAA 72 bp | TCCAGCTTGTTGGGCCTGCCCTTGCACACCACCGCGTaGCCGCTGCAGAACACGCGGCCCTGGCACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLGLPLHTTA*PLQNTRPWHSR Trigger: GCGGCTGTGCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CAA 90 bp | TCGTCCCGCTCCAGCTTGTTGGGCCTGCCCTTGCACACCACCGCGTaGCCGCTGCAGAACACGCGGCCCTGGCACAGCCGCTTCACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSSLLGLPLHTTA*PLQNTRPWHSRFTN Trigger: GTTCGTGAAGCGGCTGTGCCAGGGCCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 72 bp | GCTTCCGGGTCACCTGCCTCTGCCGCTCACTGGGGATaGTGTCGGCCGTCGGAAAGCACACGGGTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGSPASAAHWG*CRPSESTRVPG Trigger: GCCTGGAACCCGTGTGCTTTCCGACGGCCGACACCATCCCCAGTGAGCGGCAGAGGCAGGTGACCCGGAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CAA 72 bp | ACCACCTCGTCCCGCTCCAGCTTGTTGGGCCTGCCCTaGCACACCACCGCGTTGCCGCTGCAGAACACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TTSSRSSLLGLP*HTTALPLQNTR Trigger: CCGCGTGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGAGGTGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | CCACGTTCCAGGTGCCCAAACAGCTTCCGGGTCACCTaGCTCTGCCGCTCACTGGGGATGGTGTCGGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSRCPNSFRVT*LCRSLGMVSAV Trigger: GACGGCCGACACCATCCCCAGTGAGCGGCAGAGGCAGGTGACCCGGAAGCTGTTTGGGCACCTGGAACGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | CCTGCACCACCTCGTCCCGCTCCAGCTTGTTGGGCCTaGCCTTGCACACCACCGCGTTGCCGCTGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PAPPRPAPACWA*PCTPPRCRCRT Trigger: TGTTCTGCAGCGGCAACGCGGTGGTGTGCAAGGGCAGGCCCAACAAGCTGGAGCGGGACGAGGTGGTGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | CCAGGGCTGGCATCAGGGAGCCAGCACCGCAGCTCTTaGCCGCTTCCTCCACCAGCTGCCTGGCATACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLASGSQHRSS*PLPPPAAWHTA Trigger: AGCTGTATGCCAGGCAGCTGGTGGAGGAAGCGGGCAAGAGCTGCGGTGCTGGCTCCCTGATGCCAGCCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 72 bp | GGCTCAGGGAGAGACGGCAGCCTTCAAGGCAGGTGGTaGTGGCCTGGCCCACCAGCTTGCCCCCGTAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSGRDGSLQGRW*WPGPPACPRSR Trigger: TCTACTACGGGGGCAAGCTGGTGGGCCAGGCCACCACCACCTGCCTTGAAGGCTGCCGTCTCTCCCTGAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CAA 72 bp | TCCAGGGCTGGCATCAGGGAGCCAGCACCGCAGCTCTaGCCCGCTTCCTCCACCAGCTGCCTGGCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRAGIREPAPQL*PASSTSCLAYS Trigger: GCTGTATGCCAGGCAGCTGGTGGAGGAAGCGGGCAAGAGCTGCGGTGCTGGCTCCCTGATGCCAGCCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | GCATATCCGGTCACCAGTGGCAGGCCTGCACTGGGCTaGTGGACCCACCAGTCAGGGAGGATCTGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AYPVTSGRPALG*WTHQSGRIWLL Trigger: CAGGAGCCAGATCCTCCCTGACTGGTGGGTCCAGCAGCCCAGTGCAGGCCTGCCACTGGTGACCGGATATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CCA 72 bp | AGGCCATCCGGCCCATACAACTTAGGCAGCCCCGGCTaGCTCAGGGAGAGACGGCAGCCTTCAAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPSGPYNLGSPG*LRERRQPSRQV Trigger: CACCTGCCTTGAAGGCTGCCGTCTCTCCCTGAGCCAGCCGGGGCTGCCTAAGTTGTATGGGCCGGATGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 72 bp | CAGATATCCGGAAACATGCGGAAAGCCTGGTCCGGCTaGGGCTCCTCCAGGGCTGGCATCAGGGAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QISGNMRKAWSG*GSSRAGIREPA Trigger: TGCTGGCTCCCTGATGCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | CACAGCCGCTTCACGAACACGCCCTTGCGGTTGCTGTaGAGTAGCACGCCACGTTCCAGGTGCCCAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSRFTNTPLRLL*SSTPRSRCPNS Trigger: GCTGTTTGGGCACCTGGAACGTGGCGTGCTACTGCACAGCAACCGCAAGGGCGTGTTCGTGAAGCGGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | AGGGTCTCTGGTGTGAGGTACAGATATCCGGAAACATaGGGAAAGCCTGGTCCGGCTGGGGCTCCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVSGVRYRYPET*GKPGPAGAPPG Trigger: CCCTGGAGGAGCCCCAGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCTGTACCTCACACCAGAGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 72 bp | CCAGTCAGGGAGGATCTGGCTCCTGCAGGCCTCTGGTaGGGATGGGCTCCTCTTGGTCATACCCATGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: PVREDLAPAGLW*GWAPLGHTHVL Trigger: GAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCCTGACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CCA 72 bp | TGTGAGGTACAGATATCCGGAAACATGCGGAAAGCCTaGTCCGGCTGGGGCTCCTCCAGGGCTGGCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CEVQISGNMRKA*SGWGSSRAGIR Trigger: CCTGATGCCAGCCCTGGAGGAGCCCCAGCCGGACCAGGCTTTCCGCATGTTTCCGGATATCTGTACCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | TGCAGCTCTCGGATGAACTGGTTGGTGTCAAAGACCTaGACCACCTCGTCCCGCTCCAGCTTGTTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSRMNWLVSKT*TTSSRSSLLGL Trigger: CAGGCCCAACAAGCTGGAGCGGGACGAGGTGGTGCAGGTCTTTGACACCAACCAGTTCATCCGAGAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CCA 72 bp | AGGGAGGATCTGGCTCCTGCAGGCCTCTGGTGGGGATaGGCTCCTCTTGGTCATACCCATGTACTCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: REDLAPAGLWWG*APLGHTHVLIH Trigger: GTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CAA 90 bp | ACCAGCTGCCTGGCATACAGCTGCTCTACCTGCACCAGAATGAGTTaGGAGCGCAAGGGCACAGTGTCCGGAAACTCCTCCCCGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSCLAYSCSTCTRMS*ERKGTVSGNSSPKH Trigger: GTGCTTCGGGGAGGAGTTTCCGGACACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCAGCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CAA 90 bp | GGGAGGATCTGGCTCCTGCAGGCCTCTGGTGGGGATGGGCTCCTCTaGGTCATACCCATGTACTCATCCACAGAAGGTTCCTTGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRIWLLQASGGDGLL*VIPMYSSTEGSLIS Trigger: GCTGATCAAGGAACCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | CTGAGCGGCCACACTCCATCTCAGGAACTTCGCTCATaGAGCCTGCAGGTGCCACGCCCAGCTTGCATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSGHTPSQELRS*SLQVPRPACIF Trigger: AAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGATGGAGTGTGGCCGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | TTGCCCGCTTCCTCCACCAGCTGCCTGGCATACAGCTaGTCTACCTGCACCAGAATGAGTTTGGAGCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPASSTSCLAYS*STCTRMSLERK Trigger: CTTGCGCTCCAAACTCATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCAGCTGGTGGAGGAAGCGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS CAA 72 bp | TGGCTCCTGCAGGCCTCTGGTGGGGATGGGCTCCTCTaGGTCATACCCATGTACTCATCCACAGAAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLLQASGGDGLL*VIPMYSSTEGS Trigger: GGAACCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS CAA 72 bp | TGGCTCCTGCAGGCCTCTGGTGGGGATGGGCTCCTCTaGGTCATACCCATGTACTCATCCACAGAAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WLLQASGGDGLL*VIPMYSSTEGL Trigger: CAAGCCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160943.3 ENSMUST00000162658.8 |
||
| CDS CAA 90 bp | GGGAGGATCTGGCTCCTGCAGGCCTCTGGTGGGGATGGGCTCCTCTaGGTCATACCCATGTACTCATCCACAGAAGGCTTGAAGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRIWLLQASGGDGLL*VIPMYSSTEGLKME Trigger: TTCCATCTTCAAGCCTTCTGTGGATGAGTACATGGGTATGACCAAGAGGAGCCCATCCCCACCAGAGGCCTGCAGGAGCCAGATCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160943.3 ENSMUST00000162658.8 |
||
| CDS TCA 72 bp | GCTGCCTGGCATACAGCTGCTCTACCTGCACCAGAATaGGTTTGGAGCGCAAGGGCACAGTGTCCGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: AAWHTAALPAPE*VWSARAQCPET Trigger: AGTTTCCGGACACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCAGGTAGAGCAGCTGTATGCCAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
||
| CDS GCA 72 bp | CTCCATCTCAGGAACTTCGCTCATGCAGCCTGCAGGTaGCACGCCCAGCTTGCATTTTTGTTCTTCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LHLRNFAHAACR*HAQLAFLFFLG Trigger: CCCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
||
| CDS CAA 72 bp | CTGGCATACAGCTGCTCTACCTGCACCAGAATGAGTTaGGAGCGCAAGGGCACAGTGTCCGGAAACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAYSCSTCTRMS*ERKGTVSGNSS Trigger: GGAGGAGTTTCCGGACACTGTGCCCTTGCGCTCCAAACTCATTCTGGTGCAGGTAGAGCAGCTGTATGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 |
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| CDS GCA 72 bp | GCCACACTCCATCTCAGGAACTTCGCTCATGCAGCCTaGAGGTGCCACGCCCAGCTTGCATTTTTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ATLHLRNFAHAA*RCHAQLAFLFF Trigger: GAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTTCCTGAGATGGAGTGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS TCA 72 bp | CCCGTAGTAGAAGCTGATGACCATCTGGGAGAAAGCTaGATGGTGTGTGTCATAGGCGGCATATCCGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PVVEADDHLGES*MVCVIGGISGH Trigger: GTGACCGGATATGCCGCCTATGACACACACCATTCAGCTTTCTCCCAGATGGTCATCAGCTTCTACTACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047737.10 ENSMUST00000160943.3 ENSMUST00000162001.8 ENSMUST00000162658.8 |
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| CDS CAA 72 bp | TGGGACCGGTCAGTCACTTCTTCAAAATCTGGGCTCTaGTTCAGAGCACAGCGTAACCTCGTCTTCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: WDRSVTSSKSGL*FRAQRNLVFHV Trigger: CACGTGGAAGACGAGGTTACGCTGTGCTCTGAACAAGAGCCCAGATTTTGAAGAAGTGACTGACCGGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS CAA 72 bp | TTGGTCATACCCATGTACTCATCCACAGAAGGTTCCTaGATCAGCTCCTCAATCTCTGAGCGGCCACACTCC | + |
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Preference number: 6 (lower is better) Translates to: LVIPMYSSTEGS*ISSSISERPHS Trigger: GGAGTGTGGCCGCTCAGAGATTGAGGAGCTGATCAAGGAACCTTCTGTGGATGAGTACATGGGTATGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS CAA 90 bp | AACTTCGCTCATGCAGCCTGCAGGTGCCACGCCCAGCTTGCATTTTaGTTCTTCCTCGGGGACAATTCGGTAAACTTTATATGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: NFAHAACRCHAQLAF*FFLGDNSVNFIWLR Trigger: TCTGAGCCATATAAAGTTTACCGAATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATGAGCGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS CAA 72 bp | CATGCAGCCTGCAGGTGCCACGCCCAGCTTGCATTTTaGTTCTTCCTCGGGGACAATTCGGTAAACTTTATA | + |
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Preference number: 6 (lower is better) Translates to: HAACRCHAQLAF*FFLGDNSVNFI Trigger: TATAAAGTTTACCGAATTGTCCCCGAGGAAGAACAAAAATGCAAGCTGGGCGTGGCACCTGCAGGCTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047737.10 ENSMUST00000162001.8 |
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| CDS TCA 72 bp | TCTTGGTCATACCCATGTACTCATCCACAGAAGGCTTaGAGATGGAAGCATCCACCTCCTGATTGTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: SWSYPCTHPQKA*RWKHPPPDCNP Trigger: AGGATTACAATCAGGAGGTGGATGCTTCCATCTTCAAGCCTTCTGTGGATGAGTACATGGGTATGACCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160943.3 ENSMUST00000162658.8 |
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