Pregenerated sensors for IRF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025498Ensembl transcript IDs: ENSMUST00000026571.11, ENSMUST00000097952.9, ENSMUST00000106023.8, ENSMUST00000123525.2, ENSMUST00000209899.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCTCCCAGTACACCTTGCACTTGCCCATACGCAGGGCCCACAGTaGCGGTCCTCGAAGCTCCAGCTGAAGGCCGGGAGACACATGCTG | + |
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Preference number: 1 (lower is better) Translates to: YLPVHLALAHTQGPQ*RSSKLQLKAGRHML Trigger: CAGCATGTGTCTCCCGGCCTTCAGCTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 90 bp | CCTTGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCCAGGTAGATaGTGTAGTGTGGTGACCCTTGCCGCCTCCGAGCCCGAAACTCCT | + |
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Preference number: 1 (lower is better) Translates to: PWASLLTSLAQNPGR*CSVVTLAASEPETP Trigger: AGGAGTTTCGGGCTCGGAGGCGGCAAGGGTCACCACACTACACCATCTACCTGGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 90 bp | CTCAGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTaGCATCGGGGTGTTCCCGATTCCTGTCTTAGAGTGTTTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LRGLGTHRPHLPKYT*HRGVPDSCLRVFVS Trigger: GGACACAAACACTCTAAGACAGGAATCGGGAACACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR GCA 90 bp | TCAGGACCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTTGTaGTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: SGPSLLSSSLPLAAL*SCQETGHSAVGLRG Trigger: ACCTCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR CAA 90 bp | GAGGGGCCGGTAGTGCCCATAGGGCTGCCTACCTCCCAGTACACCTaGCACTTGCCCATACGCAGGGCCCACAGTGACGGTCCTCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: EGPVVPIGLPTSQYT*HLPIRRAHSDGPRS Trigger: GCTTCGAGGACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGTAGGCAGCCCTATGGGCACTACCGGCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CAA 90 bp | CCGGTAGTGCCCATAGGGCTGCCTACCTCCCAGTACACCTTGCACTaGCCCATACGCAGGGCCCACAGTGACGGTCCTCGAAGCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PVVPIGLPTSQYTLH*PIRRAHSDGPRSSS Trigger: GCTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGTAGGCAGCCCTATGGGCACTACCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CAA 90 bp | TCCAGGGAGGACACACCCTCACGCTGCACGCCCTCCAGGTATGCCTaGCATACCCATGGCTCCAGCTTCACCAGGATCAGGGTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SREDTPSRCTPSRYA*HTHGSSFTRIRVFS Trigger: GGAGAAGACCCTGATCCTGGTGAAGCTGGAGCCATGGGTATGCAAGGCATACCTGGAGGGCGTGCAGCGTGAGGGTGTGTCCTCCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATCAGGGTCTTCTCCTTGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCCACGCAGGGCCCACAGTaGCGGTCCTCGAAGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RIRVFSLGLPADKSCPKPTQGPQ*RSSKLQ Trigger: CTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGT...GGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCCAGGTAGATGGTGTAGTGTGTGGGGGTGTGGCGGTTaGGCTCCAGCAGCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: WASLLTSLAQNPGRWCSVWGCGG*APAAGV Trigger: CACCCCAGCTGCTGGAGCGCAACCGCCACACCCCCA...CACACTACACCATCTACCTGGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR TCA 90 bp | GGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACACACAGGCCCCACCTTCCCAGCAAGGAGCAGACCTaGCCCAGGGCTCCACTGATT | + |
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Preference number: 2 (lower is better) Translates to: GHSAVGLRGLGTHRPHLPSKEQT*PRAPLI Trigger: AATCAGTGGAGCCCTGGGTCAGGTCTGCTCCTTGCT...GGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCTGAGACCCACAGCACTATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR-3UTR GCA 90 bp | AGATGGTGTAGTGTGGTGACCCTTGCCGCCTCCGAGCCCGAAACTCCTCCAGTTAGGCCGGGAGACACATaGTGGAGAAGCGTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RWCSVVTLAASEPETPPVRPGDT*WRSVSV Trigger: CACAGAGACGCTTCTCCAGCATGTGTCTCCCGGCCT...AACTGGAGGAGTTTCGGGCTCGGAGGCGGCAAGGGTCACCACACTACACCATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CAA 90 bp | CGCTCAGGACCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTaGTGCTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RSGPSLLSSSLPLAA*CSCQETGHSAVGLR Trigger: TCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGGTCCTGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGATGGGGGTGTGGCGGTTAGTACACCTTGCACTTaGCCATACGCAGGGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LLQFSEESAEVEDGGVAVSTPCT*PYAGPT Trigger: TGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACT...AACCGCCACACCCCCATCTTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACATATGAAAGTGAGTGCTaGAAAGGAGGCCTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSCQETGHSAVGLRGLGTYESEC*KGGLVC Trigger: ACACACCAGGCCTCCTTTGCAGCACTCACTTTCATA...TGTGCCTAAACCTCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGTCCAGGGAGGACACACCCTCACGCTGCACGCCCTCCAGGTATGCCTTGATGGGGGTGTGGCGGTaGCGCTCCAGCAGCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LLSREDTPSRCTPSRYALMGVWR*RSSSWG Trigger: ACCCCAGCTGCTGGAGCGCAACCGCCACACCCCCAT...CAAGGCATACCTGGAGGGCGTGCAGCGTGAGGGTGTGTCCTCCCTGGACAGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR TCA 72 bp | CGCAGGGCCCACAGTGACGGTCCTCGAAGCTCCAGCTaGAGGCCGGGAGACACATGCTGGAGAAGCGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: RRAHSDGPRSSS*RPGDTCWRSVS Trigger: AGAGACGCTTCTCCAGCATGTGTCTCCCGGCCTTCAGCTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR TCA 72 bp | GTACACCTTGCACTTGCCCATACGCAGGGCCCACAGTaGCGGTCCTCGAAGCTCCAGCTGAAGGCCGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VHLALAHTQGPQ*RSSKLQLKAGR Trigger: TCTCCCGGCCTTCAGCTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR GCA 72 bp | ACACACCCTCACGCTGCACGCCCTCCAGGTATGCCTTaGATACCCATGGCTCCAGCTTCACCAGGATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: THPHAARPPGMP*IPMAPASPGSG Trigger: CCCTGATCCTGGTGAAGCTGGAGCCATGGGTATGCAAGGCATACCTGGAGGGCGTGCAGCGTGAGGGTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR CAA 90 bp | AGATGGTGTAGTGTGGTGACCCTTGCCGCCTCCGAGCCCGAAACTCCTCCAGTTCAGTACACCTTGCACTaGCCCATACGCAGGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RWCSVVTLAASEPETPPVQYTLH*PIRRAH Trigger: GTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTG...AACTGGAGGAGTTTCGGGCTCGGAGGCGGCAAGGGTCACCACACTACACCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR TCA 72 bp | GTCTTGCCCAAAACCCAGGTAGATGGTGTAGTGTGGTaGCCCTTGCCGCCTCCGAGCCCGAAACTCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLPKTQVDGVVW*PLPPPSPKLLQ Trigger: CTGGAGGAGTTTCGGGCTCGGAGGCGGCAAGGGTCACCACACTACACCATCTACCTGGGTTTTGGGCAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 72 bp | TCCCTGCTGACAAGTCTTGCCCAAAACCCAGGTAGATaGTGTAGTGTGGTGACCCTTGCCGCCTCCGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLTSLAQNPGR*CSVVTLAASEP Trigger: GGGCTCGGAGGCGGCAAGGGTCACCACACTACACCATCTACCTGGGTTTTGGGCAAGACTTGTCAGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR TCA 72 bp | GAGCCCGAAACTCCTCCAGTTCTCGGAAGAAAGTGCTaGAGTCGAAGATGGGGGTGTGGCGGTTGCGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EPETPPVLGRKC*SRRWGCGGCAP Trigger: TGGAGCGCAACCGCCACACCCCCATCTTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAGTTTCGGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 72 bp | ACGCTGCACGCCCTCCAGGTATGCCTTGCATACCCATaGCTCCAGCTTCACCAGGATCAGGGTCTTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: TLHALQVCLAYP*LQLHQDQGLLL Trigger: AAGGAGAAGACCCTGATCCTGGTGAAGCTGGAGCCATGGGTATGCAAGGCATACCTGGAGGGCGTGCAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCCAGGTAGATGGTGTAGTGTGACCTCCCAGTACACCTaGCACTTGCCCATACGCAGG | + |
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Preference number: 3 (lower is better) Translates to: WASLLTSLAQNPGRWCSVTSQYT*HLPIRR Trigger: CCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGT...CACACTACACCATCTACCTGGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 72 bp | TTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTaGCATCGGGGTGTTCCCGATTCCTGTCTTAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: LGTHRPHLPKYT*HRGVPDSCLRV Trigger: CACTCTAAGACAGGAATCGGGAACACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR TCA 72 bp | CACCAGGATCAGGGTCTTCTCCTTGGGCCTCCCTGCTaGCAAGTCTTGCCCAAAACCCAGGTAGATGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: HQDQGLLLGPPC*QVLPKTQVDGV Trigger: TACACCATCTACCTGGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGATCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CCA 72 bp | AGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTaGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SECCKGGLVCRD*GSPSFKGLYKV Trigger: GACCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR GCA 72 bp | TCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTTGTaGTCCTGTCAGGAGACAGGACATAGTGCTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SLLSSSLPLAAL*SCQETGHSAVG Trigger: ACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTAGGGCTCCACTGATTTaGAACTATTTATTGGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: ESECCKGGLVCRDWGSPSRAPLI*NYLLGV Trigger: AACTCCCAATAAATAGTTCAAAATCAGTGGAGCCCT...AGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR CCA 72 bp | TTCTTGATTATGAAAGTGAGTGCTGCAAAGGAGGCCTaGTGTGTAGGGACTGGGGGTCACCTTCTTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: FLIMKVSAAKEA*CVGTGGHLLSR Trigger: CCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTCATAATCAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR TCA 72 bp | GGTCCACTAGAGACACTATACAGCAAGGAGCAGACCTaGCCCAGGGCTCCACTGATTTTGAACTATTTATTG | + |
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Preference number: 3 (lower is better) Translates to: GPLETLYSKEQT*PRAPLILNYLL Trigger: CAATAAATAGTTCAAAATCAGTGGAGCCCTGGGTCAGGTCTGCTCCTTGCTGTATAGTGTCTCTAGTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR TCA 90 bp | AGTGCTGAAGTCGAAGATGGGGGTGTGGCGGTTGCGCTCCAGCAGCTGGGGTGGGTGAGAGCTGGCTGTTaGGGCCTGGGACTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SAEVEDGGVAVALQQLGWVRAGC*GLGLGT Trigger: TGTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCAC...CCACCCCAGCTGCTGGAGCGCAACCGCCACACCCCCATCTTCGACTTCAGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTGGGTCTCAGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCCAGGAGCCTGTaGTGGGACGGGGTCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: CCGSQRFRHTQAPPSQVHLARSL*WDGVCP Trigger: GGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAG...GTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCTGAGACCCACAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTACGCAGGGCCCACAGTaGCGGTCCTCGAAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGTQGPQ*RSSKLQ Trigger: CTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGT...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTGTGAGAGCTGGCTGTTaGGGCCTGGGACTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGVRAGC*GLGLGT Trigger: TGTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCAC...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR CCA 90 bp | GGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACACACAGGCCCCACCTTCCCGCGCTCGGTGAGAGCTaGCTGTTGAGGCCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: GHSAVGLRGLGTHRPHLPALGES*LLRPGT Trigger: AGTCCCAGGCCTCAACAGCCAGCTCTCACCGAGCGC...GGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCTGAGACCCACAGCACTATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACATTGCGCTCCAGCAGCTaGGGTGGGGTGGAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CSCQETGHSAVGLRGLGTLRSSS*GGVEGP Trigger: CGGCCCCTCCACCCCACCCCAGCTGCTGGAGCGCAA...TGTGCCTAAACCTCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| 3UTR CAA 72 bp | GTAGTGCCCATAGGGCTGCCTACCTCCCAGTACACCTaGCACTTGCCCATACGCAGGGCCCACAGTGACGGT | + |
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Preference number: 4 (lower is better) Translates to: VVPIGLPTSQYT*HLPIRRAHSDG Trigger: ACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGTAGGCAGCCCTATGGGCACTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| 3UTR CAA 72 bp | GACACACCCTCACGCTGCACGCCCTCCAGGTATGCCTaGCATACCCATGGCTCCAGCTTCACCAGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: DTPSRCTPSRYA*HTHGSSFTRIR Trigger: CCTGATCCTGGTGAAGCTGGAGCCATGGGTATGCAAGGCATACCTGGAGGGCGTGCAGCGTGAGGGTGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACATGCAGCCCCTCGTACTaGCCGCTGCTGACCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: CSCQETGHSAVGLRGLGTCSPSY*PLLTSP Trigger: GGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCA...TGTGCCTAAACCTCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR CCA 90 bp | GAGTCAAGGCCACTGACCCAGGTCCATGAGGAAGTGTTCGATGTCTTCGTAGAGTGCAGCCCCTCGTACTaGCCGCTGCTGACCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: ESRPLTQVHEEVFDVFVECSPSY*PLLTSP Trigger: GGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCA...CTCTACGAAGACATCGAACACTTCCTCATGGACCTGGGTCAGTGGCCTTGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGACACGGTCTTGCTCCTaGCCAGGAGCCTGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EAWCVGTGGHLLSRDSTRTRSCS*PGACGG Trigger: CCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGT...CCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR TCA 90 bp | TGCTCCTGTCAGGAGACAGGACATAGTGCTGTGGGTCTCAGAGGTTTAGGCACACAAGGCTGCGCTCGGTaGGAGCTGGCTGTTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSCQETGHSAVGLRGLGTQGCAR*ELAVEA Trigger: GGCCTCAACAGCCAGCTCTCACCGAGCGCAGCCTTG...TGTGCCTAAACCTCTGAGACCCACAGCACTATGTCCTGTCTCCTGACAGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR GCA 90 bp | GGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTCCACTAGAGACACTATGGGGGTGTGGCGGTTaGGCTCCAGCAGCTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLGVTFFQGTLQGPLETLWGCGG*APAAGV Trigger: CACCCCAGCTGCTGGAGCGCAACCGCCACACCCCCA...TAGTGTCTCTAGTGGACCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR CCA 90 bp | ACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTGTTCCCGATTCCTGTCAGGGTCTTCTCCTTaGGCCTCCCTGCTGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: TQAPPSQVHLASGCSRFLSGSSP*ASLLTS Trigger: ACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGA...CAGGAATCGGGAACACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTTGCGGCCCTTGTACATaGTGGTCACATCCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGCGPCT*WSHPGT Trigger: GGTTCCTGGATGTGACCATCATGTACAAGGGCCGCA...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTCCTCCCAGTACACCTTaGACTTGCCCATACGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESECCKGGLVCRDWGSPSPPSTP*TCPYAG Trigger: CCCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGG...AGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | AGACACATGCTGGAGAAGCGTCTCTGTGTAGTGCAGCTGCTTCTGATCTGGGAGACACGGTCTTGCTCCTaGCCAGGAGCCTGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RHMLEKRLCVVQLLLIWETRSCS*PGACGG Trigger: CCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGT...CTCCCAGATCAGAAGCAGCTGCACTACACAGAGACGCTTCTCCAGCATGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAGGCCACTGACCCAGGTCCATGAGGAAGTGTTCGATGTCTTCGTAGAGGTTGAGGCCTGGGACTaGGGACAGCTTCCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPLTQVHEEVFDVFVEVEAWD*GQLPPA Trigger: GGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAAC...CTCTACGAAGACATCGAACACTTCCTCATGGACCTGGGTCAGTGGCCTTGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CCA 90 bp | AGACACATGCTGGAGAAGCGTCTCTGTGTAGTGCAGCTGCTTCTGATCTGGGAGGCGCTCGGTGAGAGCTaGCTGTTGAGGCCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RHMLEKRLCVVQLLLIWEALGES*LLRPGT Trigger: AGTCCCAGGCCTCAACAGCCAGCTCTCACCGAGCGC...CTCCCAGATCAGAAGCAGCTGCACTACACAGAGACGCTTCTCCAGCATGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTTACTGCTGGGGCCATaGGGCTGTACAGGAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: EAWCVGTGGHLLSRDSTRLLLGP*GCTGTR Trigger: GCGTGTTCCTGTACAGCCCCATGGCCCCAGCAGTAA...CCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGGGTCTTCTCCTTGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCCTTACTGCTGGGGCCATaGGGCTGTACAGGAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RIRVFSLGLPADKSCPKPLLLGP*GCTGTR Trigger: GCGTGTTCCTGTACAGCCCCATGGCCCCAGCAGTAA...GGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| 3UTR CAA 72 bp | CATGGCTCCAGCTTCACCAGGATCAGGGTCTTCTCCTaGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: HGSSFTRIRVFS*GLPADKSCPKP Trigger: GGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGATCCTGGTGAAGCTGGAGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR GCA 90 bp | CCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTTGTGCTCCTGTCAGGAGAGGCCGGGAGACACATaGTGGAGAAGCGTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSSLPLAALCSCQERPGDT*WRSVSV Trigger: CACAGAGACGCTTCTCCAGCATGTGTCTCCCGGCCT...CTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTAGTACACCTTGCACTTaGCCATACGCAGGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ESECCKGGLVCRDWGSPSSTPCT*PYAGPT Trigger: TGTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACT...AGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTTACAAGCCGAGACTGCTaGTGTCCAGGGAGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSAAKEAWCVGTGGHLLTSRDC*CPGRTH Trigger: GTGTGTCCTCCCTGGACAGCAGCAGTCTCGGCTTGT...AAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | CCGCCTCCGAGCCCGAAACTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGTGCACAGCGGAAGTTaGTCTTCCAGCCTCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPKLLQFSEESAEVEVHSGS*SSSLFA Trigger: AGCGAAGAGGCTGGAAGACCAACTTCCGCTGTGCAC...TTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAGTTTCGGGCTCGGAGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTCCACTAGAGACACTAGTTGAGGCCTGGGACTaGGGACAGCTTCCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVTFFQGTLQGPLETLVEAWD*GQLPPA Trigger: GGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAAC...TAGTGTCTCTAGTGGACCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTTGCCTTGCATACCCATaGCTCCAGCTTCACCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGCLAYP*LQLHQD Trigger: ATCCTGGTGAAGCTGGAGCCATGGGTATGCAAGGCA...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCAGCTGTCAGCAGTCGCTCAGGACCGTCCCTGCTTAGCAGTTCTCTTCCCACAGCCCAGGCCTTaGAGATCTGTGCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSQLSAVAQDRPCLAVLFPQPRP*RSVHLL Trigger: AAGAAGATGCACAGATCTTCAAGGCCTGGGCTGTGG...GAAGAGAACTGCTAAGCAGGGACGGTCCTGAGCGACTGCTGACAGCTGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGATGGGGGTGTGGCGGCCCTGTGCTGTGGAGTaGACAGCGGAAGTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSSRKKVLKSKMGVWRPCAVE*TAEVGL Trigger: AAGACCAACTTCCGCTGTGCACTCCACAGCACAGGG...CCGCCACACCCCCATCTTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTTTCCACCTGCCATGCTaGATAGGGTTCCTCGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGFHLPC*IGFLVN Trigger: GTTTACGAGGAACCCTATGCAGCATGGCAGGTGGAA...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTTGCCCATACGCAGGGCCCACAGTGACGGTCCTCGAAGCTCCAGCTGAATCGGATTCCAGTATGTaGCTGTACTGCAGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTCPYAGPTVTVLEAPAESDSSM*LYCRTS Trigger: ACTGGTTCTGCAGTACAGCCACATACTGGAATCCGA...TTCAGCTGGAGCTTCGAGGACCGTCACTGTGGGCCCTGCGTATGGGCAAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGCCCGAAACTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGATGTGCGGCCCTTGTACATaGTGGTCACATCCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LRARNSSSSRKKVLKSKMCGPCT*WSHPGT Trigger: GGTTCCTGGATGTGACCATCATGTACAAGGGCCGCA...CATCTTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAGTTTCGGGCTCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTTGCCCAAAACCCAGGTAGATGGTGTAGTGTGGTGACCCTTGCCGCCTCCTTCCACCTGCCATGCTaGATAGGGTTCCTCGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAQNPGRWCSVVTLAASFHLPC*IGFLVN Trigger: GTTTACGAGGAACCCTATGCAGCATGGCAGGTGGAA...GGAGGCGGCAAGGGTCACCACACTACACCATCTACCTGGGTTTTGGGCAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCCAGCTGTCAGCAGTCGCTCAGGACCGTCCCTGCTTAGCAGTTCTCTTCAGTATGTGGCTGTACTaGAGAACCTGTGTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQLSAVAQDRPCLAVLFSMWLY*RTCVGR Trigger: TCTGCCCACACAGGTTCTGCAGTACAGCCACATACT...GAAGAGAACTGCTAAGCAGGGACGGTCCTGAGCGACTGCTGACAGCTGGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTCTTGATTATGAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACGGAGCTCAGCAGGACTaGGAAAGATCACCGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLDYESECCKGGLVCRDGAQQD*ERSPAG Trigger: CCCAGCCGGTGATCTTTCCCAGTCCTGCTGAGCTCC...GTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTCATAATCAAGAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| 3UTR CAA 72 bp | CCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTaGTGCTCCTGTCAGGAGACAGGACATAGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSSLPLAA*CSCQETGHSAV Trigger: CACAGCACTATGTCCTGTCTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR TCA 90 bp | AGACACATGCTGGAGAAGCGTCTCTGTGTAGTGCAGCTGCTTCTGATCTGGGAGCCACAGCCCAGGCCTTaGAGATCTGTGCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHMLEKRLCVVQLLLIWEPQPRP*RSVHLL Trigger: AAGAAGATGCACAGATCTTCAAGGCCTGGGCTGTGG...CTCCCAGATCAGAAGCAGCTGCACTACACAGAGACGCTTCTCCAGCATGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTCCACTAGAGACACTAGTGCACAGCGGAAGTTaGTCTTCCAGCCTCTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGVTFFQGTLQGPLETLVHSGS*SSSLFA Trigger: AGCGAAGAGGCTGGAAGACCAACTTCCGCTGTGCAC...TAGTGTCTCTAGTGGACCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCAGCTGTCAGCAGTCGCTCAGGACCGTCCCTGCTTAGCAGTTCTCTTCCAAAACCCAGGTAGATaGTGTAGTGTGGTGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSQLSAVAQDRPCLAVLFQNPGR*CSVVTL Trigger: AAGGGTCACCACACTACACCATCTACCTGGGTTTTG...GAAGAGAACTGCTAAGCAGGGACGGTCCTGAGCGACTGCTGACAGCTGGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTTCTTGATTATGAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACCCCTGTGCTGTGGAGTaGACAGCGGAAGTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLDYESECCKGGLVCRDPCAVE*TAEVGL Trigger: AAGACCAACTTCCGCTGTGCACTCCACAGCACAGGG...GTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTCATAATCAAGAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS CCA 90 bp | CCAGCCTCTTCGCTCTCTTCGCTCAGCAGCCTCAGCCTCTGGGGGTaGCAGGTTAACTCCACTAGGTGGCCACCTCCCTCGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PASSLSSLSSLSLWG*QVNSTRWPPPSGHS Trigger: GCTGTGGCCCGAGGGAGGTGGCCACCTAGTGGAGTTAACCTGCCACCCCCAGAGGCTGAGGCTGCTGAGCGAAGAGAGCGAAGAGGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000123525.2 ENSMUST00000209899.2 |
||
| CDS TCA 90 bp | TGCGAGCCTCGTTCAGCCACTGCAGCCCCTCGTACTGGCCGCTGCTaGCCTCCCCCAATAGCCAGTCTCCAAACAGCACTCGCTGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: CEPRSATAAPRTGRC*PPPIASLQTALAGP Trigger: GGGTCCAGCGAGTGCTGTTTGGAGACTGGCTATTGGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCAGTGGCTGAACGAGGCTCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS CCA 90 bp | CTCAGCAGCCTCAGCCTCTGGGGGTGGCAGGTTAACTCCACTAGGTaGCCACCTCCCTCGGGCCACAGCCCAGGCCTTGAAGATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLSLWGWQVNSTR*PPPSGHSPGLEDLC Trigger: GCACAGATCTTCAAGGCCTGGGCTGTGGCCCGAGGGAGGTGGCCACCTAGTGGAGTTAACCTGCCACCCCCAGAGGCTGAGGCTGCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTTAGGCACACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTATGGGGGTGTGGCGGTaGCGCTCCAGCAGCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLGTHRPHLPKYTWHRGMGVWR*RSSSWG Trigger: ACCCCAGCTGCTGGAGCGCAACCGCCACACCCCCAT...ACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGTGTGCCTAAACCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS TCA 90 bp | TGGGGTGCCCCACCACTGCCTGTAGCACTGTGCGGCCCTTGTACATaGTGGTCACATCCAGGAACCCAAGGCTGCGCTCAGGAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGAPPLPVALCGPCT*WSHPGTQGCAQEPV Trigger: CACAGGCTCCTGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGGGGCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097952.9 |
||
| CDS CCA 90 bp | CGGAAGACTGTGCGAGCCTCGTTCAGCCACTGCAGCCCCTCGTACTaGCCGCTGCTGACCTCCCCCAATAGCCAGTCTCCAAACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RKTVRASFSHCSPSY*PLLTSPNSQSPNST Trigger: AGTGCTGTTTGGAGACTGGCTATTGGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCAGTGGCTGAACGAGGCTCGCACAGTCTTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS GCA 90 bp | TGGCTGTTGAGGCCTGGGACTGGGGACAGCTTCCACCTGCCATGCTaGATAGGGTTCCTCGTAAACACGGTCTTGCTCCTGGCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLLRPGTGDSFHLPC*IGFLVNTVLLLARS Trigger: GCTCCTGGCCAGGAGCAAGACCGTGTTTACGAGGAACCCTATGCAGCATGGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAACAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS GCA 90 bp | AGCTGGCTGTTGAGGCCTGGGACTGGGGACAGCTTCCACCTGCCATaGTGCATAGGGTTCCTCGTAAACACGGTCTTGCTCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLLRPGTGDSFHLP*CIGFLVNTVLLLAR Trigger: CCTGGCCAGGAGCAAGACCGTGTTTACGAGGAACCCTATGCAGCATGGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAACAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS GCA 90 bp | AACACGGTCTTGCTCCTGGCCAGGAGCCTGTGGTGGGACGGGGTCTaGCCCAGACTCGGATTCCAGTATGTGGCTGTACTGCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTVLLLARSLWWDGV*PRLGFQYVAVLQNQ Trigger: CTGGTTCTGCAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CAA 90 bp | CCGCCTCCGAGCCCGAAACTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGGTGAGAGCTGGCTGTaGAGGCCTGGGACTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPPSPKLLQFSEESAEVEGESWL*RPGTGD Trigger: GTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCACC...TTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAGTTTCGGGCTCGGAGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCCCCACCTTCCCAAGTACACCTGGCATCGGGGTGTTCCCGATTCCTGCAGTACACCTTGCACTaGCCCATACGCAGGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQAPPSQVHLASGCSRFLQYTLH*PIRRAH Trigger: GTGGGCCCTGCGTATGGGCAAGTGCAAGGTGTACTG...CAGGAATCGGGAACACCCCGATGCCAGGTGTACTTGGGAAGGTGGGGCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS CCA 90 bp | ATAGGGTTCCTCGTAAACACGGTCTTGCTCCTGGCCAGGAGCCTGTaGTGGGACGGGGTCTGCCCCAGACTCGGATTCCAGTATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGFLVNTVLLLARSL*WDGVCPRLGFQYVA Trigger: AGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGTTTACGAGGAACCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS GCA 90 bp | AGGTGGCCACCTCCCTCGGGCCACAGCCCAGGCCTTGAAGATCTGTaGATCTTCTTCATCCAGATCCCTACGACCGAAATGCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPPPSGHSPGLEDL*IFFIQIPTTEMLPG Trigger: CCCTGGAAGCATTTCGGTCGTAGGGATCTGGATGAAGAAGATGCACAGATCTTCAAGGCCTGGGCTGTGGCCCGAGGGAGGTGGCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTCTCGTAAACACGGTCTaGCTCCTGGCCAGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESECCKGGLVCRDWGSPSLVNTV*LLARSL Trigger: CAGGCTCCTGGCCAGGAGCAAGACCGTGTTTACGAG...AGAAGGTGACCCCCAGTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGCCCTCCAGGTATGCCTaGCATACCCATGGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAWCVGTGGHLLSRDSTRPSRYA*HTHGSS Trigger: GCTGGAGCCATGGGTATGCAAGGCATACCTGGAGGG...CCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTGGTGTGTAGGGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGACCTCCCAGTACACCTaGCACTTGCCCATACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAWCVGTGGHLLSRDSTRTSQYT*HLPIRR Trigger: CCTGCGTATGGGCAAGTGCAAGGTGTACTGGGAGGT...CCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCCCTACACACCAGGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS CCA 90 bp | TCTCTGTGTAGTGCAGCTGCTTCTGATCTGGGAGCTCAGCAGGACTaGGAAAGATCACCGGCTGGGGCTCTGAAGTTCTTACTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCSAAASDLGAQQD*ERSPAGALKFLLLG Trigger: CCCCAGCAGTAAGAACTTCAGAGCCCCAGCCGGTGATCTTTCCCAGTCCTGCTGAGCTCCCAGATCAGAAGCAGCTGCACTACACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000123525.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTTCTTGATTATGAAAGTGAGTGCTGCAAAGGAGGCCTGGTGTGTAGGGACGGTGAGAGCTGGCTGTaGAGGCCTGGGACTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVLDYESECCKGGLVCRDGESWL*RPGTGD Trigger: GTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCACC...GTCCCTACACACCAGGCCTCCTTTGCAGCACTCACTTTCATAATCAAGAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTTGTGCTCCTGTCAGGAGTGTGTGGGCAGAGCATaGCTGAGGCTCACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSSSLPLAALCSCQECVGRA*LRLTSS Trigger: GGAAGAAGTGAGCCTCAGCAATGCTCTGCCCACACA...CTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGATTCTGAGTCAAGGCCACTGACCCAGGTCCATGAGGAAGTGTTCGATCTCGTAAACACGGTCTaGCTCCTGGCCAGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWDSESRPLTQVHEEVFDLVNTV*LLARSL Trigger: CAGGCTCCTGGCCAGGAGCAAGACCGTGTTTACGAG...ATCGAACACTTCCTCATGGACCTGGGTCAGTGGCCTTGACTCAGAATCCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS-3UTR CAA 90 bp | CCGTCCCTGCTTAGCAGTTCTCTTCCTCTAGCTGCTTTGTGCTCCTGTCAGGAGAGCACTGTGCGGCCCTaGTACATGATGGTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: PSLLSSSLPLAALCSCQESTVRP*YMMVTS Trigger: GGATGTGACCATCATGTACAAGGGCCGCACAGTGCT...CTCCTGACAGGAGCACAAAGCAGCTAGAGGAAGAGAACTGCTAAGCAGGGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCCAGTTCTCGGAAGAAAGTGCTGAAGTCGAAGATGGGGGTGTGGCGGTTAGCACTGTGCGGCCCTaGTACATGATGGTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: LLQFSEESAEVEDGGVAVSTVRP*YMMVTS Trigger: GGATGTGACCATCATGTACAAGGGCCGCACAGTGCT...AACCGCCACACCCCCATCTTCGACTTCAGCACTTTCTTCCGAGAACTGGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS-3UTR CAA 90 bp | GGACTGGGGGTCACCTTCTTTCAAGGGACTCTACAAGGTCCACTAGAGACACTAATCAGGGTCTTCTCCTaGGGCCTCCCTGCTGACAAG | + |
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Preference number: 5 (lower is better) Translates to: GLGVTFFQGTLQGPLETLIRVFS*GLPADK Trigger: CTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGAT...TAGTGTCTCTAGTGGACCTTGTAGAGTCCCTTGAAAGAAGGTGACCCCCAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS GCA 72 bp | GGTACGCGGAAGACTGTGCGAGCCTCGTTCAGCCACTaGAGCCCCTCGTACTGGCCGCTGCTGACCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GTRKTVRASFSH*SPSYWPLLTSP Trigger: GGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCAGTGGCTGAACGAGGCTCGCACAGTCTTCCGCGTACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | GTGCGAGCCTCGTTCAGCCACTGCAGCCCCTCGTACTaGCCGCTGCTGACCTCCCCCAATAGCCAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRASFSHCSPSY*PLLTSPNSQSP Trigger: TGGAGACTGGCTATTGGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCAGTGGCTGAACGAGGCTCGCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | CTCAGCCTCTGGGGGTGGCAGGTTAACTCCACTAGGTaGCCACCTCCCTCGGGCCACAGCCCAGGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSLWGWQVNSTR*PPPSGHSPGLE Trigger: TTCAAGGCCTGGGCTGTGGCCCGAGGGAGGTGGCCACCTAGTGGAGTTAACCTGCCACCCCCAGAGGCTGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | CACATCCAGGAACCCAAGGCTGCGCTCAGGAGCCTGTaGTGGGACGGGGTCTGCCCCAGACTCGGATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HIQEPKAALRSL*WDGVCPRLGFQ Trigger: CTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGAGCGCAGCCTTGGGTTCCTGGATGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097952.9 |
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| CDS TCA 72 bp | AGGAACCCAAGGCTGCGCTCGGTGAGAGCTGGCTGTTaGGGCCTGGGACTGGGGACAGCTTCCACCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RNPRLRSVRAGC*GLGLGTASTCH Trigger: ATGGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCACCGAGCGCAGCCTTGGGTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | TCGCTCTCTTCGCTCAGCAGCCTCAGCCTCTGGGGGTaGCAGGTTAACTCCACTAGGTGGCCACCTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLSSLSSLSLWG*QVNSTRWPPPS Trigger: CGAGGGAGGTGGCCACCTAGTGGAGTTAACCTGCCACCCCCAGAGGCTGAGGCTGCTGAGCGAAGAGAGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000123525.2 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | CTCGTAAACACGGTCTTGCTCCTGGCCAGGAGCCTGTaGTGGGACGGGGTCTGCCCCAGACTCGGATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVNTVLLLARSL*WDGVCPRLGFQ Trigger: CTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGTTTACGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CAA 90 bp | GGTCACATCCAGGAACCCAAGGCTGCGCTCGGTGAGAGCTGGCTGTaGAGGCCTGGGACTGGGGACAGCTTCCACCTGCCATGCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: GHIQEPKAALGESWL*RPGTGDSFHLPCCI Trigger: TATGCAGCATGGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCTCAACAGCCAGCTCTCACCGAGCGCAGCCTTGGGTTCCTGGATGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CAA 90 bp | ACGCATCTGGGGTGCCCCACCACTGCCTGTAGCACTGTGCGGCCCTaGTACATGATGGTCACATCCAGGAACCCAAGGCTGCGCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: THLGCPTTACSTVRP*YMMVTSRNPRLRSV Trigger: CACCGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGGGGCACCCCAGATGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS TCA 72 bp | CGTTCAGCCACTGCAGCCCCTCGTACTGGCCGCTGCTaGCCTCCCCCAATAGCCAGTCTCCAAACAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: RSATAAPRTGRC*PPPIASLQTAL Trigger: GAGTGCTGTTTGGAGACTGGCTATTGGGGGAGGTCAGCAGCGGCCAGTACGAGGGGCTGCAGTGGCTGAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS GCA 72 bp | TTGCTCCTGGCCAGGAGCCTGTGGTGGGACGGGGTCTaGCCCAGACTCGGATTCCAGTATGTGGCTGTACTG | + |
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Preference number: 6 (lower is better) Translates to: LLLARSLWWDGV*PRLGFQYVAVL Trigger: CAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS GCA 72 bp | AAGGCTGCGCTCAGGAGCCTGTGGTGGGACGGGGTCTaGCCCAGACTCGGATTCCAGTATGTGGCTGTACTG | + |
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Preference number: 6 (lower is better) Translates to: KAALRSLWWDGV*PRLGFQYVAVL Trigger: CAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGAGCGCAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097952.9 |
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| CDS CCA 72 bp | ATCCAGGAACCCAAGGCTGCGCTCAGGAGCCTGTGGTaGGACGGGGTCTGCCCCAGACTCGGATTCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: IQEPKAALRSLW*DGVCPRLGFQY Trigger: ATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGAGCGCAGCCTTGGGTTCCTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097952.9 |
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| CDS CAA 72 bp | CTGCCATGCTGCATAGGGTTCCTCGTAAACACGGTCTaGCTCCTGGCCAGGAGCCTGTGGTGGGACGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPCCIGFLVNTV*LLARSLWWDGV Trigger: GACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGTTTACGAGGAACCCTATGCAGCATGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CAA 90 bp | ACGCATCTGGGGTGCCCCACCACTGCCTGTAGCACTGTGCGGCCCTaGTACATGATGGTCACATCCAGGAACCCAAGGCTGCGCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: THLGCPTTACSTVRP*YMMVTSRNPRLRSG Trigger: TCCTGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGGGGCACCCCAGATGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097952.9 |
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| CDS TCA 72 bp | CCACCACTGCCTGTAGCACTGTGCGGCCCTTGTACATaGTGGTCACATCCAGGAACCCAAGGCTGCGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PPLPVALCGPCT*WSHPGTQGCAR Trigger: CCGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | GTAAACACGGTCTTGCTCCTGGCCAGGAGCCTGTGGTaGGACGGGGTCTGCCCCAGACTCGGATTCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: VNTVLLLARSLW*DGVCPRLGFQY Trigger: ATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCCACCACAGGCTCCTGGCCAGGAGCAAGACCGTGTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | TCTGGGAGCTCAGCAGGACTGGGAAAGATCACCGGCTaGGGCTCTGAAGTTCTTACTGCTGGGGCCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGSSAGLGKITG*GSEVLTAGAMG Trigger: CCCCATGGCCCCAGCAGTAAGAACTTCAGAGCCCCAGCCGGTGATCTTTCCCAGTCCTGCTGAGCTCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000123525.2 |
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| CDS CAA 90 bp | ACGCATCTGGGGTGCCCCACCACTGCCTGTAGCACTGTGCGGCCCTaGTACATGATGGTCACATCCAGGAACCCAAGGCTGCGCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: THLGCPTTACSTVRP*YMMVTSRNPRLRSV Trigger: TACTGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGGGGCACCCCAGATGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123525.2 |
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| CDS TCA 72 bp | CCACCACTGCCTGTAGCACTGTGCGGCCCTTGTACATaGTGGTCACATCCAGGAACCCAAGGCTGCGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PPLPVALCGPCT*WSHPGTQGCAQ Trigger: CTGAGCGCAGCCTTGGGTTCCTGGATGTGACCATCATGTACAAGGGCCGCACAGTGCTACAGGCAGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097952.9 ENSMUST00000123525.2 |
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| CDS GCA 72 bp | TACGACCGAAATGCTTCCAGGGTACGCGGAAGACTGTaGGAGCCTCGTTCAGCCACTGCAGCCCCTCGTACT | + |
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Preference number: 6 (lower is better) Translates to: YDRNASRVRGRL*EPRSATAAPRT Trigger: AGTACGAGGGGCTGCAGTGGCTGAACGAGGCTCGCACAGTCTTCCGCGTACCCTGGAAGCATTTCGGTCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS GCA 72 bp | AGGCCTGGGACTGGGGACAGCTTCCACCTGCCATGCTaGATAGGGTTCCTCGTAAACACGGTCTTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RPGTGDSFHLPC*IGFLVNTVLLL Trigger: CAGGAGCAAGACCGTGTTTACGAGGAACCCTATGCAGCATGGCAGGTGGAAGCTGTCCCCAGTCCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026571.11 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CCA 72 bp | GGGACGGGGTCTGCCCCAGACTCGGATTCCAGTATGTaGCTGTACTGCAGAACCTGTGTGGGCAGAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: GTGSAPDSDSSM*LYCRTCVGRAL Trigger: CAATGCTCTGCCCACACAGGTTCTGCAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS CCA 72 bp | GGGACGGGGTCTGCCCCAGACTCGGATTCCAGTATGTaGCTGTACTGCAGAACCAGTAGATCCAAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GTGSAPDSDSSM*LYCRTSRSKLP Trigger: CGGGAGCTTGGATCTACTGGTTCTGCAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGACCCCGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS CAA 72 bp | CTAGGTGGCCACCTCCCTCGGGCCACAGCCCAGGCCTaGAAGATCTGTGCATCTTCTTCATCCAGATCCCTA | + |
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Preference number: 6 (lower is better) Translates to: LGGHLPRATAQA*KICASSSSRSL Trigger: TAGGGATCTGGATGAAGAAGATGCACAGATCTTCAAGGCCTGGGCTGTGGCCCGAGGGAGGTGGCCACCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS CAA 72 bp | CCAGGCTCTACCTTCACCAGGATCAGGGTCTTCTCCTaGGGCCTCCCTGCTGACAAGTCTTGCCCAAAACCC | + |
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Preference number: 6 (lower is better) Translates to: PGSTFTRIRVFS*GLPADKSCPKP Trigger: GGGTTTTGGGCAAGACTTGTCAGCAGGGAGGCCCAAGGAGAAGACCCTGATCCTGGTGAAGGTAGAGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123525.2 |
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| CDS CAA 90 bp | CTTGCCAGAAATGATCCTGGGGACACACCCTGTGTGGGCAGAGCATaGCTGAGGCTCACTTCTTCCCTATTTTCCGTGGCTGGGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: LARNDPGDTPCVGRA*LRLTSSLFSVAGPT Trigger: TGTGGGCCCAGCCACGGAAAATAGGGAAGAAGTGAGCCTCAGCAATGCTCTGCCCACACAGGGTGTGTCCCCAGGATCATTTCTGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 |
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| CDS TCA 72 bp | GGCTGTACTGCAGAACCTGTGTGGGCAGAGCATTGCTaGGGCTCACTTCTTCCCTATTTTCCGTGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GCTAEPVWAEHC*GSLLPYFPWLG Trigger: GCCCAGCCACGGAAAATAGGGAAGAAGTGAGCCTCAGCAATGCTCTGCCCACACAGGTTCTGCAGTACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS GCA 72 bp | TCTGCCCCAGACTCGGATTCCAGTATGTGGCTGTACTaGAGAACCTGTGTGGGCAGAGCATTGCTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAPDSDSSMWLY*RTCVGRALLRL Trigger: GAGCCTCAGCAATGCTCTGCCCACACAGGTTCTGCAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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| CDS CAA 90 bp | TTAACTCCACTAGGTGGCCACCTCCCTCGGGCCACAGCCCAGGCCTaGAAGATCTGTGCATCTTCTTCATCCAGATCCCTACGACCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LTPLGGHLPRATAQA*KICASSSSRSLRPK Trigger: TTTCGGTCGTAGGGATCTGGATGAAGAAGATGCACAGATCTTCAAGGCCTGGGCTGTGGCCCGAGGGAGGTGGCCACCTAGTGGAGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000209899.2 |
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| CDS GCA 72 bp | TCTGCCCCAGACTCGGATTCCAGTATGTGGCTGTACTaGAGAACCAGTAGATCCAAGCTCCCGGCTAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SAPDSDSSMWLY*RTSRSKLPAKF Trigger: GAACTTAGCCGGGAGCTTGGATCTACTGGTTCTGCAGTACAGCCACATACTGGAATCCGAGTCTGGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209899.2 |
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| CDS CCA 72 bp | CAAGAGGTCCCCGGCATCACTAGAAAGCAGAGGGCTTaGGGTTTGGAGCCCAGCATTTTCTCTTGCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QEVPGITRKQRA*GLEPSIFSCQK Trigger: TTTCTGGCAAGAGAAAATGCTGGGCTCCAAACCCCAAGCCCTCTGCTTTCTAGTGATGCCGGGGACCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 |
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| CDS CCA 72 bp | GAATTGTCTTGGCGCAAGATAAAACGCCCTGTGCTGTaGAGTGCACAGCGGAAGTTGGTCTTCCAGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ELSWRKIKRPVL*SAQRKLVFQPL Trigger: AAGAGGCTGGAAGACCAACTTCCGCTGTGCACTCCACAGCACAGGGCGTTTTATCTTGCGCCAAGACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026571.11 ENSMUST00000097952.9 ENSMUST00000106023.8 ENSMUST00000123525.2 ENSMUST00000209899.2 |
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| CDS CAA 72 bp | ATGTGGCTGTACTGCAGAACCTGTGTGGGCAGAGCATaGCTGAGGCTCACTTCTTCCCTATTTTCCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: MWLYCRTCVGRA*LRLTSSLFSVA Trigger: AGCCACGGAAAATAGGGAAGAAGTGAGCCTCAGCAATGCTCTGCCCACACAGGTTCTGCAGTACAGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106023.8 |
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