Pregenerated sensors for IRF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026638Ensembl transcript IDs: ENSMUST00000076521.7
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTCAGAGCATATCACAGATGCCCGACTCCCTCCAGATGGTCTTTaGGAAGAAAATAAGGAAGAGGAGAGTGTCTGCCATGAGGCACAT | + |
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Preference number: 1 (lower is better) Translates to: LSEHITDARLPPDGL*EENKEEESVCHEAH Trigger: ATGTGCCTCATGGCAGACACTCTCCTCTTCCTTATTTTCTTCTCAAAGACCATCTGGAGGGAGTCGGGCATCTGTGATATGCTCTGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 90 bp | CATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATAGCCTGCTaGCTTGTCACAGAAGGGAAAGGAAATGTCCCCTATTCCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSLPDPVVWTFLIAC*LVTEGKGNVPYSTA Trigger: AGCTGTGGAATAGGGGACATTTCCTTTCCCTTCTGTGACAAGTCAGCAGGCTATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CCA 90 bp | GGTGACTTTCAGACCTTGGCACCATCTCTATTTAGATATCAAGACTaGTTGCTAGGCAACCAATCAGCTCCTCTCTTACTTCCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GDFQTLAPSLFRYQD*LLGNQSAPLLLPPA Trigger: TGCTGGAGGAAGTAAGAGAGGAGCTGATTGGTTGCCTAGCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CCA 90 bp | AACATTGGAGTTAATCTGGAGTGCACAGTAAGGAAAAGGAGGAACTaGGGGAAATCCTCCTCCCTTCTGAGTCTTCAAATGAAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: NIGVNLECTVRKRRN*GKSSSLLSLQMKAG Trigger: TCCTGCCTTCATTTGAAGACTCAGAAGGGAGGAGGATTTCCCCCAGTTCCTCCTTTTCCTTACTGTGCACTCCAGATTAACTCCAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 90 bp | AATCATAGTTGCTCATCAACTTCACATATAAGATGGTGTGAGTGGTaGCAAGGTATGTGGCTGGTGACAATTCTCCCATGGAGTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: NHSCSSTSHIRWCEW*QGMWLVTILPWSPS Trigger: GGAGGGACTCCATGGGAGAATTGTCACCAGCCACATACCTTGTCACCACTCACACCATCTTATATGTGAAGTTGATGAGCAACTATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 90 bp | TGTGCTCCCAGCATTCCGAAAAAGATGCAAGACAAGAAACTGGACTaGCTAGATAGGACCACACAAAATCATGCATTGTCCCAACATATT | + |
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Preference number: 1 (lower is better) Translates to: CAPSIPKKMQDKKLD*LDRTTQNHALSQHI Trigger: AATATGTTGGGACAATGCATGATTTTGTGTGGTCCTATCTAGGCAGTCCAGTTTCTTGTCTTGCATCTTTTTCGGAATGCTGGGAGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 90 bp | GAAAGCTTACTGAATATGACAAGAGAAGATCCTGCATGTAGTGTGTaGTCCCAGCATTCCGAAAAAGATGCAAGACAAGAAACTGGACTG | + |
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Preference number: 1 (lower is better) Translates to: ESLLNMTREDPACSV*SQHSEKDARQETGL Trigger: CAGTCCAGTTTCTTGTCTTGCATCTTTTTCGGAATGCTGGGAGCACACACTACATGCAGGATCTTCTCTTGTCATATTCAGTAAGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 90 bp | AAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATaGAAGCAAGAAGGGGAAACCATGTGGTCTAAACACAATGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: KQSSIQIRSVFKELG*KQEGETMWSKHNAE Trigger: TTCTGCATTGTGTTTAGACCACATGGTTTCCCCTTCTTGCTTTCATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 90 bp | GAACATACAACTGAGAACTGTGGAGAGGAGATGAGATTCAGCATCTaGCTTCAGGGTTTATCTGTAGTGGTTCTTTTAACATTGGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: EHTTENCGEEMRFSI*LQGLSVVVLLTLEL Trigger: TAACTCCAATGTTAAAAGAACCACTACAGATAAACCCTGAAGGCAGATGCTGAATCTCATCTCCTCTCCACAGTTCTCAGTTGTATGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 90 bp | TATCCCTGTGACATGAAACAGATAGACACCAGTATTCAAGAGGATTaGGGCTATAACCAGAGAGACCCATCTTACTTTTCATCTAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: YPCDMKQIDTSIQED*GYNQRDPSYFSSKS Trigger: AGACTTAGATGAAAAGTAAGATGGGTCTCTCTGGTTATAGCCTCAATCCTCTTGAATACTGGTGTCTATCTGTTTCATGTCACAGGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CCA 90 bp | AGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTaGCAGTCAGTCAAGCAGAACATAGATGCGGAGCAATTTACAAAC | + |
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Preference number: 1 (lower is better) Translates to: RPGNKSKTNSFDFPS*QSVKQNIDAEQFTN Trigger: GTTTGTAAATTGCTCCGCATCTATGTTCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 90 bp | ACTCTGACATGTTCATACTATGGCCATGTGTATAAAATTATACTTTaGTCTTATTCACAGAGACACCTGCCTTTCCTAACTCACCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: TLTCSYYGHVYKIIL*SYSQRHLPFLTHPD Trigger: ATCTGGGTGAGTTAGGAAAGGCAGGTGTCTCTGTGAATAAGAGCAAAGTATAATTTTATACACATGGCCATAGTATGAACATGTCAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTAATCTGGAGTGCACAGTAAGGAAAAGGAGGAACTGGGGGAAATCCTCCTTCCTCATAGCCTGCTaGCTTGTCACAGAAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GVNLECTVRKRRNWGKSSFLIAC*LVTEGK Trigger: TTTCCCTTCTGTGACAAGTCAGCAGGCTATGAGGAA...GGAGGATTTCCCCCAGTTCCTCCTTTTCCTTACTGTGCACTCCAGATTAACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | GACTTTCAGACCTTGGCACCATCTCTATTTAGATATCAAGACTGGTaGCTAGGCAACCAATCAGCTCCTCTCTTACTTCCTCCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DFQTLAPSLFRYQDW*LGNQSAPLLLPPAG Trigger: CCCTGCTGGAGGAAGTAAGAGAGGAGCTGATTGGTTGCCTAGCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTAATCTGGAGTGCACAGTAAGGAAAAGGAGGAACTGGGGGAAATCCTCCTCTATGAGACATAACTaGACTGTTCTTCACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GVNLECTVRKRRNWGKSSSMRHN*TVLHCL Trigger: GAGACAGTGAAGAACAGTGCAGTTATGTCTCATAGA...GGAGGATTTCCCCCAGTTCCTCCTTTTCCTTACTGTGCACTCCAGATTAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | AATGTCAGACTCTTGAAAGTCTCTGAACAAGAACGGTCAATTTTGTaGTCAGAGCATATCACAGATGCCCGACTCCCTCCAGATGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: NVRLLKVSEQERSIL*SEHITDARLPPDGL Trigger: AAGACCATCTGGAGGGAGTCGGGCATCTGTGATATGCTCTGACAACAAAATTGACCGTTCTTGTTCAGAGACTTTCAAGAGTCTGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGACAGCTGGAGAGTaGATGGGAGCATTGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVKTAGE*MGALGN Trigger: GTTTCCCAATGCTCCCATTCACTCTCCAGCTGTCTT...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCACTCCACACACAGGTTaGGTGACTTTCAGACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVTPHTG*VTFRPW Trigger: CCAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGT...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | TTTATGAGCTTTTACTCCACACACAGGTTGGGTGACTTTCAGACCTaGGCACCATCTCTATTTAGATATCAAGACTGGTTGCTAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: FMSFYSTHRLGDFQT*APSLFRYQDWLLGN Trigger: GTTGCCTAGCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGTAAAAGCTCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | TGGAGAGTGAATGGGAGCATTGGGAAACTTAGAGCTCCTGGGGACTaGGTATCTACTAAAACCAGAGAAAGCTTACTGAATATGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: WRVNGSIGKLRAPGD*VSTKTRESLLNMTR Trigger: TCTTGTCATATTCAGTAAGCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAATGCTCCCATTCACTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCAGTATTCAAGAGGATTaGGGCTATAACCAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: IGKLRAPGDLVSTKTRESSIQED*GYNQRD Trigger: GTCTCTCTGGTTATAGCCTCAATCCTCTTGAATACT...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCTTCAAGGAACTTGGATaGAAGCAAGAAGGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVFKELG*KQEGET Trigger: GGTTTCCCCTTCTTGCTTTCATCCAAGTTCCTTGAA...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTACTGTGGAGAGGAGATaGGATTCAGCATCTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSDTAKDLAINLRQTVLTTVERR*DSASAF Trigger: GAAGGCAGATGCTGAATCTCATCTCCTCTCCACAGT...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR GCA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCGCATTCCGAAAAAGATaGAAGACAAGAAACTGGACT | + |
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Preference number: 2 (lower is better) Translates to: IGKLRAPGDLVSTKTRESAFRKR*KTRNWT Trigger: AGTCCAGTTTCTTGTCTTGCATCTTTTTCGGAATGC...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | CACACAGGTTGGGTGACTTTCAGACCTTGGCACCATCTCTATTTAGATATCAAGGGCCAAATGCAATTTTaGGCATCATTCCAAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: HTGWVTFRPWHHLYLDIKGQMQF*ASFQTF Trigger: AAAGGTTTGGAATGATGCCCAAAATTGCATTTGGCC...CTTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCACCCAACCTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGAAGGAAAAGGAGGAACTaGGGGAAATCCTCCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: INLRQTVLTFQVGSQSSRRKRRN*GKSSSL Trigger: AAGGGAGGAGGATTTCCCCCAGTTCCTCCTTTTCCT...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGGTGACAATTCTCCCATaGAGTCCCTCCACTGACAAC | + |
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Preference number: 2 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKVTILP*SPSTDN Trigger: GTTGTCAGTGGAGGGACTCCATGGGAGAATTGTCAC...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGGAACCCCTCAGGGGATaGTACCTTGATAAGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKEPLRG*YLDKLE Trigger: CTCTAACTTATCAAGGTATCATCCCCTGAGGGGTTC...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTATCTGTAGTGGTTCTTTTAACATTGGAGTTAATCTGGAGTGCACAGTATTGGAATTCAAATTATaGGAAGGGACTGGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GFICSGSFNIGVNLECTVLEFKL*EGTGAD Trigger: GTCTGCTCCAGTCCCTTCTCATAATTTGAATTCCAA...TACTGTGCACTCCAGATTAACTCCAATGTTAAAAGAACCACTACAGATAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTATCTGTAGTGGTTCTTTTAACATTGGAGTTAATCTGGAGTGCACAGTAGAAGGGGAAACCATGTaGTCTAAACACAATGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFICSGSFNIGVNLECTVEGETM*SKHNAE Trigger: TTCTGCATTGTGTTTAGACCACATGGTTTCCCCTTC...TACTGTGCACTCCAGATTAACTCCAATGTTAAAAGAACCACTACAGATAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | TTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGTaGGGTGACTTTCAGACCTTGGCACCATCTCTATTTAGATATCAA | + |
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Preference number: 2 (lower is better) Translates to: FSFNTYFMSFYSTHR*GDFQTLAPSLFRYQ Trigger: TTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 90 bp | TTATTCACAGAGACACCTGCCTTTCCTAACTCACCCAGATTTCTCTaGGTCCTCCTTTTAATAATCTCTAAGAGAACTTTAAACCAAATC | + |
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Preference number: 2 (lower is better) Translates to: LFTETPAFPNSPRFL*VLLLIISKRTLNQI Trigger: GATTTGGTTTAAAGTTCTCTTAGAGATTATTAAAAGGAGGACCAAGAGAAATCTGGGTGAGTTAGGAAAGGCAGGTGTCTCTGTGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR TCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACAAAGAGTTTTACTCTaGCATGTTCATACTATGGCC | + |
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Preference number: 2 (lower is better) Translates to: INLRQTVLTFQVGSQSSRQRVLL*HVHTMA Trigger: GGCCATAGTATGAACATGTCAGAGTAAAACTCTTTG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR GCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTCTGTTAGACTTTAAATaGATCCCAACTTTCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: VSDTAKDLAINLRQTVLTLLDFK*IPTFSG Trigger: GCCACTGAAAGTTGGGATGCATTTAAAGTCTAACAG...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTTCTTCACTGTCTCCATaGCTCACAACAAGTGATATA | + |
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Preference number: 2 (lower is better) Translates to: VSDTAKDLAINLRQTVLTSSLSP*LTTSDI Trigger: TATATCACTTGTTGTGAGCCATGGAGACAGTGAAGA...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATGTGACTTTCAGACCTTaGCACCATCTCTATTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHVTFRP*HHLYLD Trigger: ATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCAC...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 72 bp | GTGGCTGGTGACAATTCTCCCATGGAGTCCCTCCACTaGCAACCATTCTTACTCTCGTGGAATCCTTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: VAGDNSPMESLH*QPFLLSWNPLA Trigger: AGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCATGGGAGAATTGTCACCAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 72 bp | TCTTCAAATGAAGGCAGGAAGAAGACAGCTGGAGAGTaGATGGGAGCATTGGGAAACTTAGAGCTCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SSNEGRKKTAGE*MGALGNLELLG Trigger: CCCCAGGAGCTCTAAGTTTCCCAATGCTCCCATTCACTCTCCAGCTGTCTTCTTCCTGCCTTCATTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR TCA 72 bp | CCAGATCCTGTTGTCTGGACATTCCTCATAGCCTGCTaGCTTGTCACAGAAGGGAAAGGAAATGTCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: PDPVVWTFLIAC*LVTEGKGNVPY Trigger: ATAGGGGACATTTCCTTTCCCTTCTGTGACAAGTCAGCAGGCTATGAGGAATGTCCAGACAACAGGATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCCTCTCGTGGAATCCTTaGGCTTTCCATGTCACCATC | + |
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Preference number: 3 (lower is better) Translates to: IGKLRAPGDLVSTKTRESLSWNP*AFHVTI Trigger: GATGGTGACATGGAAAGCCAAAGGATTCCACGAGAG...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CAA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCCAGTGTTCAAGGAACTaGGATGAAAGCAAGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: IGKLRAPGDLVSTKTRESQCSRN*DESKKG Trigger: CCCCTTCTTGCTTTCATCCAAGTTCCTTGAACACTG...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CCA 72 bp | CAGACCTTGGCACCATCTCTATTTAGATATCAAGACTaGTTGCTAGGCAACCAATCAGCTCCTCTCTTACTT | + |
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Preference number: 3 (lower is better) Translates to: QTLAPSLFRYQD*LLGNQSAPLLL Trigger: AAGTAAGAGAGGAGCTGATTGGTTGCCTAGCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CCA 72 bp | TTTACTCCACACACAGGTTGGGTGACTTTCAGACCTTaGCACCATCTCTATTTAGATATCAAGACTGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: FTPHTGWVTFRP*HHLYLDIKTGC Trigger: GCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 72 bp | AGCATTCCGAAAAAGATGCAAGACAAGAAACTGGACTaGCTAGATAGGACCACACAAAATCATGCATTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SIPKKMQDKKLD*LDRTTQNHALS Trigger: GGACAATGCATGATTTTGTGTGGTCCTATCTAGGCAGTCCAGTTTCTTGTCTTGCATCTTTTTCGGAATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 72 bp | CTGAATATGACAAGAGAAGATCCTGCATGTAGTGTGTaGTCCCAGCATTCCGAAAAAGATGCAAGACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LNMTREDPACSV*SQHSEKDARQE Trigger: TTCTTGTCTTGCATCTTTTTCGGAATGCTGGGAGCACACACTACATGCAGGATCTTCTCTTGTCATATTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR GCA 72 bp | ACTGAGAACTGTGGAGAGGAGATGAGATTCAGCATCTaGCTTCAGGGTTTATCTGTAGTGGTTCTTTTAACA | + |
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Preference number: 3 (lower is better) Translates to: TENCGEEMRFSI*LQGLSVVVLLT Trigger: TGTTAAAAGAACCACTACAGATAAACCCTGAAGGCAGATGCTGAATCTCATCTCCTCTCCACAGTTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR-3UTR CAA 90 bp | GTCACCATCTTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGAGATATCAAGACTGGTaGCTAGGCAACCAATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VTIFSFNTYFMSFYSTHRRYQDW*LGNQSA Trigger: AGCTGATTGGTTGCCTAGCAACCAGTCTTGATATCT...CCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGTACTCCACACACAGGTaGGGTGACTTTCAGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKYSTHR*GDFQTL Trigger: CAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGTA...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCGAACGGTCAATTTTGTaGTCAGAGCATATCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVERSIL*SEHITD Trigger: ATCTGTGATATGCTCTGACAACAAAATTGACCGTTC...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR TCA 72 bp | TCCATGTCACCATCTTCTCCTTTAATACTTACTTTATaGGCTTTTACTCCACACACAGGTTGGGTGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SMSPSSPLILTL*AFTPHTGWVTF Trigger: GAAAGTCACCCAACCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR TCA 72 bp | GACATGAAACAGATAGACACCAGTATTCAAGAGGATTaGGGCTATAACCAGAGAGACCCATCTTACTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: DMKQIDTSIQED*GYNQRDPSYFS Trigger: TGAAAAGTAAGATGGGTCTCTCTGGTTATAGCCTCAATCCTCTTGAATACTGGTGTCTATCTGTTTCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CCA 72 bp | CATCTAAGTCTTGGAATTCAAATTATGAGAAGGGACTaGAGCAGACACTCTATGAGACATAACTGCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSLGIQIMRRD*SRHSMRHNCTV Trigger: AACAGTGCAGTTATGTCTCATAGAGTGTCTGCTCCAGTCCCTTCTCATAATTTGAATTCCAAGACTTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CCA 72 bp | AACCAGAGAGACCCATCTTACTTTTCATCTAAGTCTTaGAATTCAAATTATGAGAAGGGACTGGAGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: NQRDPSYFSSKS*NSNYEKGLEQT Trigger: TGTCTGCTCCAGTCCCTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGAAGGCCAAATGCAATTTaGGGCATCATTCCAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: INLRQTVLTFQVGSQSSRRPNAI*GIIPNL Trigger: AAGGTTTGGAATGATGCCCAAAATTGCATTTGGCCT...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CCA 72 bp | AATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTaGCAGTCAGTCAAGCAGAACATAGATGCGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NKSKTNSFDFPS*QSVKQNIDAEQ Trigger: TTGCTCCGCATCTATGTTCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR TCA 72 bp | ATGGAAAAATCTGAATGTCAGACTCTTGAAAGTCTCTaGACAAGAACGGTCAATTTTGTTGTCAGAGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: MEKSECQTLESL*TRTVNFVVRAY Trigger: ATATGCTCTGACAACAAAATTGACCGTTCTTGTTCAGAGACTTTCAAGAGTCTGACATTCAGATTTTTCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCAAATGGCATGTCCGCTaGCCTCCAGGATCAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTDNHSYSRGILWLSKWHVR*PPGSVP Trigger: GGGGACTGATCCTGGAGGTCAGCGGACATGCCATTT...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAATTCCCACACTGCAGTTaGCCACGCTGGCTGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQFPHCS*PRWLAP Trigger: TGGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAA...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | AACAGGTCAAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATTGGGGGCAGGCTGCATaGGCTGCCAGCTCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRSNRAQFRSDQCSRNLDWGQAA*AASSPG Trigger: CCCAGGAGAGCTGGCAGCCCATGCAGCCTGCCCCCA...ATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTTGACCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCGGCAGGCAGAGCCTGTaGCAGCTGCATGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVGRQSL*QLHAGG Trigger: GCCCCCAGCATGCAGCTGCCACAGGCTCTGCCTGCC...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCTCATGGGGAGAGAGCTaGTCCATAGCTCTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTDNHSYSRGILWLSSWGES*SIALEN Trigger: GTTCTCCAGAGCTATGGATCAGCTCTCTCCCCATGA...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAAGGGAGCACATGGCCCTaGCCAGTACACTTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQGSTWP*PVHFAL Trigger: CAGTGCAAAGTGTACTGGTCAGGGCCATGTGCTCCC...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | AACAGGTCAAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATATGCTGGGGGCAGGCTaGATGGGCTGCCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRSNRAQFRSDQCSRNLDMLGAG*MGCQLS Trigger: GGAGAGCTGGCAGCCCATGCAGCCTGCCCCCAGCAT...ATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTTGACCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | AACAGGTCAAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATAGAGCCTGTGGCAGCTaGATGCTGGGGGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRSNRAQFRSDQCSRNLDRACGS*MLGAGC Trigger: GCAGCCTGCCCCCAGCATGCAGCTGCCACAGGCTCT...ATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTTGACCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAATCAGTCCCCTGTCCATaGCATCCAACAGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQSVPCP*HPTACW Trigger: CCAGCAAGCTGTTGGATGTCATGGACAGGGGACTGA...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCCAGCTCTCCTGGGTTTaGAGGATGCGGTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGKLRAPGDLVSTKTRESQLSWV*RMRYSC Trigger: GCAGCTGTACCGCATCCTTCAAACCCAGGAGAGCTG...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCGGGGGCTGTGCCGCGTaGCATGTTTCCAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVGGCAA*HVSRGS Trigger: AGATCCCCTGGAAACATGCCACGCGGCACAGCCCCC...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | GTCACCATCTTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGCCAAAGAGCTCCTCCTaGTCGGGCATGGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTIFSFNTYFMSFYSTHRPKSSS*SGMGPR Trigger: CCTGGGCCCCATGCCCGACCAGGAGGAGCTCTTTGG...CCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR GCA 90 bp | GGAGTTAATCTGGAGTGCACAGTAAGGAAAAGGAGGAACTGGGGGAAATCCTCCTTCTCGTTGGTGATATaGTCTGGACCTGGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVNLECTVRKRRNWGKSSFSLVI*SGPGNL Trigger: CAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAA...GGAGGATTTCCCCCAGTTCCTCCTTTTCCTTACTGTGCACTCCAGATTAACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAAAGCCTTCCATTTAGCTaGGTCAGGATCGTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQSLPFS*VRIVYP Trigger: GGGGTAGACGATCCTGACCCAGCTAAATGGAAGGCT...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAATTAATGACAGAGCCCTaGGTCTGGGGGATGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQLMTEP*VWGMSH Trigger: GTGTGACATCCCCCAGACCCAGGGCTCTGTCATTAA...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCAAGGGGAAGGTGTCCTaGATGGGGACATGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGKLRAPGDLVSTKTRESKGKVS*MGTWCC Trigger: ACAGCACCATGTCCCCATCCAGGACACCTTCCCCTT...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | CATAGCCCTCAGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGATGCAGTTGCCCACGCTaGCTGGCGCCATGGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSPQNIFFNILYQILLSGCSCPR*LAPWEN Trigger: GTTCTCCCATGGCGCCAGCCAGCGTGGGCAACTGCA...TCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCTGAGGGCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGAGCCGGCAGCCCTaGGGGTTGCTCACCGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVKSRQP*GLLTVI Trigger: TATGACGGTGAGCAACCCCCAGGGCTGCCGGCTCTT...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAGAGCACAGCGGAGCTaGGCCTTCCATTTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVRAQRS*AFHLAG Trigger: CCCAGCTAAATGGAAGGCTCAGCTCCGCTGTGCTCT...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR GCA 90 bp | AACAGGTCAAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATTCTTGTTGGGGGCTGTaGCGCGTGGCATGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRSNRAQFRSDQCSRNLDSCWGL*RVACFQ Trigger: CTGGAAACATGCCACGCGGCACAGCCCCCAACAAGA...ATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTTGACCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR GCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCCCTGGGAACTTGACCTaGTCCAGGCTGACAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVPGNLT*SRLTGP Trigger: TGGTCCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGG...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | GGAATTCAAATTATGAGAAGGGACTGGAGCAGACACTCTATGAGACATAACTGCCATGCGAGCCACCACTaGGATGACCTGGACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GIQIMRRDWSRHSMRHNCHASHH*DDLDQD Trigger: ATCTTGGTCCAGGTCATCCCAGTGGTGGCTCGCATG...GCAGTTATGTCTCATAGAGTGTCTGCTCCAGTCCCTTCTCATAATTTGAATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | GGAGTTAATCTGGAGTGCACAGTAAGGAAAAGGAGGAACTGGGGGAAATCCTCCTCCTTCCCACGATACTaGAATTTGATGTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVNLECTVRKRRNWGKSSSFPRY*NLMSKS Trigger: TGACTTGGACATCAAATTTCAGTATCGTGGGAAGGA...GGAGGATTTCCCCCAGTTCCTCCTTTTCCTTACTGTGCACTCCAGATTAACTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR GCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAACTGGTGAACAGCTTCTaGTTCTCGTTGGTGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQLVNSF*FSLVIC Trigger: GCATATCACCAACGAGAAGCAGAAGCTGTTCACCAG...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATGTTGCCCACGCTGGCTaGCGCCATGGGAGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHVAHAG*RHGRTV Trigger: AACGGTTCTCCCATGGCGCCAGCCAGCGTGGGCAAC...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACTCTGTGTAGCCAGATaGGACCAGGGTAGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: INLRQTVLTFQVGSQSSRLCVAR*DQGRGH Trigger: GTGGCCTCTACCCTGGTCTCATCTGGCTACACAGAG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | AAGGAAGAGGAGAGTGTCTGCCATGAGGCACATGGAATCATAGTTGCTCATCAATACAGCTGCTTGAGCTaGGCAACGATGTTATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEEESVCHEAHGIIVAHQYSCLS*ATMLSL Trigger: CAAAGATAACATCGTTGCTCAGCTCAAGCAGCTGTA...TTGATGAGCAACTATGATTCCATGTGCCTCATGGCAGACACTCTCCTCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCACACTGATTCGGGGCTaGAGTTTCCCACACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVTLIRG*SFPHCS Trigger: ACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGT...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCGAAGGGTTGAATGGGTaGCTGGGGTACTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVEGLNG*LGYFHL Trigger: GAGATGGAAGTACCCCAGGCACCCATTCAACCCTTC...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCAGAGTTTTAAGGCCAAATGCAATTTTGGGCATCATTCCAAACCTTTTCCAGAGGTTCTGTTTTaGGCCACACTGATTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQSFKAKCNFGHHSKPFPEVLF*ATLIRG Trigger: GCCCCGAATCAGTGTGGCCCAAAACAGAACCTCTGG...AAAAGGTTTGGAATGATGCCCAAAATTGCATTTGGCCTTAAAACTCTGACTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | GGAATTCAAATTATGAGAAGGGACTGGAGCAGACACTCTATGAGACATAACTGCGTTGGTGATATGCTCTaGACCTGGGAACTTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQIMRRDWSRHSMRHNCVGDML*TWELDL Trigger: CAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAAC...GCAGTTATGTCTCATAGAGTGTCTGCTCCAGTCCCTTCTCATAATTTGAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | GGAATTCAAATTATGAGAAGGGACTGGAGCAGACACTCTATGAGACATAACTGCATCTGTCCTTTCTGGTaGGCAATGAGCTCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIQIMRRDWSRHSMRHNCICPFW*AMSSLR Trigger: CCTGAGTGAGCTCATTGCCCACCAGAAAGGACAGAT...GCAGTTATGTCTCATAGAGTGTCTGCTCCAGTCCCTTCTCATAATTTGAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | CTCTTGAAAGTCTCTGAACAAGAACGGTCAATTTTGTaGTCAGAGCATATCACAGATGCCCGACTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKVSEQERSIL*SEHITDARLPP Trigger: TGGAGGGAGTCGGGCATCTGTGATATGCTCTGACAACAAAATTGACCGTTCTTGTTCAGAGACTTTCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTTGTTTTGGGCCACACTaGTTCGGGGCTGCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSDTAKDLAINLRQTVLTCFGPH*FGAAVS Trigger: GGAAACTGCAGCCCCGAATCAGTGTGGCCCAAAACA...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | GTCACCATCTTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGTCCTGGATGGGGACATaGTGCTGTGACTGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTIFSFNTYFMSFYSTHRSWMGT*CCDCSS Trigger: ACTTGAGCAGTCACAGCACCATGTCCCCATCCAGGA...CCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | ACCTTGGCACCATCTCTATTTAGATATCAAGACTGGTaGCTAGGCAACCAATCAGCTCCTCTCTTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLAPSLFRYQDW*LGNQSAPLLLP Trigger: AGGAAGTAAGAGAGGAGCTGATTGGTTGCCTAGCAACCAGTCTTGATATCTAAATAGAGATGGTGCCAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACCAACAGCTTGCTGGTaGACAGCTTCTGCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: INLRQTVLTFQVGSQSSRPTACW*TASASR Trigger: ACGAGAAGCAGAAGCTGTTCACCAGCAAGCTGTTGG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGTTTTCTTCCTCTTGTTaGGGGCTGTGCCGCGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKFSSSC*GLCRVA Trigger: TGCCACGCGGCACAGCCCCCAACAAGAGGAAGAAAA...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATGGAAGGTGTCCTGGATaGGGACATGGTGCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHGRCPG*GHGAVT Trigger: AGTCACAGCACCATGTCCCCATCCAGGACACCTTCC...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCTCTATCTGTCCTTTCTaGTGGGCAATGAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVSICPF*WAMSSL Trigger: GAGTGAGCTCATTGCCCACCAGAAAGGACAGATAGA...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATCAGGGGCTTTCCATCTaGCCACTCTTCCCCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHQGLSI*PLFPKA Trigger: TGCTTTGGGGAAGAGTGGCCAGATGGAAAGCCCCTG...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CCA 90 bp | AACAGGTCAAACAGAGCTCAATTCAGATCAGATCAGTGTTCAAGGAACTTGGATGTTATCTTTGATGTCTaGAGTGGAGATCTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NRSNRAQFRSDQCSRNLDVIFDV*SGDLQA Trigger: CGCCTGCAGATCTCCACTCCAGACATCAAAGATAAC...ATCCAAGTTCCTTGAACACTGATCTGATCTGAATTGAGCTCTGTTTGACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | AATGGGAGCATTGGGAAACTTAGAGCTCCTGGGGACTaGGTATCTACTAAAACCAGAGAAAGCTTACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NGSIGKLRAPGD*VSTKTRESLLN Trigger: ATTCAGTAAGCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAATGCTCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATTGCACTGGCACAGCCTaGTGGCATAAATGGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHCTGTA*WHKWHV Trigger: GACATGCCATTTATGCCATCAGGCTGTGCCAGTGCA...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACTCACCGTCATAGTTTaGCCATACTCCTTCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: INLRQTVLTFQVGSQSSRLTVIV*PYSFPR Trigger: TCGTGGGAAGGAGTATGGGCAAACTATGACGGTGAG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | GTCACCATCTTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGTCATGGGCACTTCCTTaGTGCCATCGTACATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTIFSFNTYFMSFYSTHRSWALP*CHRTSS Trigger: ACTTGATGTACGATGGCACCAAGGAAGTGCCCATGA...CCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGGATATGCTCTGGACCTaGGAACTTGACCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKDMLWT*ELDLLQ Trigger: CTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATC...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATTGCGGTACAGCTGCTTaGGCTGAGCAACGATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHCGTAA*AEQRCY Trigger: ATAACATCGTTGCTCAGCTCAAGCAGCTGTACCGCA...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGACATGGTGCTGTGACTaGTCAAGTTCATCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKTWCCD*SSSSSS Trigger: GGAGGAGGATGAACTTGAGCAGTCACAGCACCATGT...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTGGATCTGGAAGCGTTTaGAATCTCTGTGTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSDTAKDLAINLRQTVLTGSGSV*NLCVAR Trigger: TCTGGCTACACAGAGATTCCAAACGCTTCCAGATCC...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGATCTTCACAGGATTCATaGGCACTTCCTTGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: INLRQTVLTFQVGSQSSRSSQDS*ALPWCH Trigger: ATGGCACCAAGGAAGTGCCCATGAATCCTGTGAAGA...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGTGTAGAAGGGTTGAATaGGTGCCTGGGGTACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKCRRVE*VPGVLP Trigger: TGGAAGTACCCCAGGCACCCATTCAACCCTTCTACA...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGTGTTTCCAGGGGATCTaGAAGCGTTTGGAATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKCFQGI*KRLESL Trigger: CAGAGATTCCAAACGCTTCCAGATCCCCTGGAAACA...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | AATACTTACTTTATGAGCTTTTACTCCACACACAGGTaGGGTGACTTTCAGACCTTGGCACCATCTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NTYFMSFYSTHR*GDFQTLAPSLF Trigger: AAATAGAGATGGTGCCAAGGTCTGAAAGTCACCCAACCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | GAGACACCTGCCTTTCCTAACTCACCCAGATTTCTCTaGGTCCTCCTTTTAATAATCTCTAAGAGAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETPAFPNSPRFL*VLLLIISKRTL Trigger: TAAAGTTCTCTTAGAGATTATTAAAAGGAGGACCAAGAGAAATCTGGGTGAGTTAGGAAAGGCAGGTGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| 3UTR CAA 72 bp | GCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTaGACTTTCCAAGTTGGCAGTCAGTCAAGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AKDLAINLRQTV*TFQVGSQSSRT Trigger: TGTTCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR TCA 90 bp | AGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGACATTCCTCATCCAGACAAAACAACTTaGCCTTCTTCTGCCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTYFSTFFTRSCCLDIPHPDKTT*PSSASQ Trigger: TTGAGAGGCAGAAGAAGGTCAAGTTGTTTTGTCTGG...ATGAGGAATGTCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR TCA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACAACGATGTTATCTTTaGTGTCTGGAGTGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: INLRQTVLTFQVGSQSSRQRCYL*CLEWRS Trigger: AGATCTCCACTCCAGACATCAAAGATAACATCGTTG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR GCA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTAACTTGACCTTCTTCTaGCTCTCAATCAGGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSDTAKDLAINLRQTVLTNLTFF*LSIRLG Trigger: TCCTAACCTGATTGAGAGGCAGAAGAAGGTCAAGTT...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| 3UTR CAA 72 bp | CTGGACTGCCTAGATAGGACCACACAAAATCATGCATaGTCCCAACATATTTGTCAATTTTTCATTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDCLDRTTQNHA*SQHICQFFIMV Trigger: GACCATAATGAAAAATTGACAAATATGTTGGGACAATGCATGATTTTGTGTGGTCCTATCTAGGCAGTCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 90 bp | CTTCCATCTCCAGAGGTTCTGTTTTGGGCCACACTGATTCGGGGCTaGAGTTTCCCACACTGCAGTTGCCCACGCTGGCTGGCGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSPEVLFWATLIRG*SFPHCSCPRWLAPW Trigger: CCATGGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGTGGCCCAAAACAGAACCTCTGGAGATGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 90 bp | TTCTGCTTCTCGTTGGTGATATGCTCTGGACCTGGGAACTTGACCTaGTCCAGGCTGACAGGACCAAAGAGCTCCTCCTGGTCGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FCFSLVICSGPGNLT*SRLTGPKSSSWSGM Trigger: CATGCCCGACCAGGAGGAGCTCTTTGGTCCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 90 bp | CCTGCTTTTGTTGAGAGCACAGCGGAGCTGAGCCTTCCATTTAGCTaGGTCAGGATCGTCTACCCCTTCCTGGTACTTTCCGGTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAFVESTAELSLPFS*VRIVYPFLVLSGLH Trigger: GTGGAGACCGGAAAGTACCAGGAAGGGGTAGACGATCCTGACCCAGCTAAATGGAAGGCTCAGCTCCGCTGTGCTCTCAACAAAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCCGGCAGCCCTGGGGGTaGCTCACCGTCATAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSPSTDNHSYSRGILWLSRQPWG*LTVIVC Trigger: GCAAACTATGACGGTGAGCAACCCCCAGGGCTGCCG...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 90 bp | TCCAACAGCTTGCTGGTGAACAGCTTCTGCTTCTCGTTGGTGATATaGTCTGGACCTGGGAACTTGACCTGCTCCAGGCTGACAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SNSLLVNSFCFSLVI*SGPGNLTCSRLTGP Trigger: TGGTCCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAAGCAGAAGCTGTTCACCAGCAAGCTGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 90 bp | CAGCTTGCTGGTGAACAGCTTCTGCTTCTCGTTGGTGATATGCTCTaGACCTGGGAACTTGACCTGCTCCAGGCTGACAGGACCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLAGEQLLLLVGDML*TWELDLLQADRTKE Trigger: CTCTTTGGTCCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAAGCAGAAGCTGTTCACCAGCAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 90 bp | GCGGTACAGCTGCTTGAGCTGAGCAACGATGTTATCTTTGATGTCTaGAGTGGAGATCTGCAGGCGAACGCTGCCACTGTCAAAGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: AVQLLELSNDVIFDV*SGDLQANAATVKGP Trigger: CGGTCCTTTGACAGTGGCAGCGTTCGCCTGCAGATCTCCACTCCAGACATCAAAGATAACATCGTTGCTCAGCTCAAGCAGCTGTACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 90 bp | CCGTTGATGTTCAGGAAGGGGAAGGTGTCCTGGATGGGGACATGGTaGTGTGACTGCTCAAGTTCATCCTCCTCCTCATCTTCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PLMFRKGKVSWMGTW*CDCSSSSSSSSSST Trigger: TGTGGATGAAGATGAGGAGGAGGATGAACTTGAGCAGTCACAGCACCATGTCCCCATCCAGGACACCTTCCCCTTCCTGAACATCAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS TCA 90 bp | TACATCAAGTTGAACTCCCTGCTTTTGTTGAGAGCACAGCGGAGCTaGGCCTTCCATTTAGCTGGGTCAGGATCGTCTACCCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YIKLNSLLLLRAQRS*AFHLAGSGSSTPSW Trigger: CCAGGAAGGGGTAGACGATCCTGACCCAGCTAAATGGAAGGCTCAGCTCCGCTGTGCTCTCAACAAAAGCAGGGAGTTCAACTTGATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCCCTGACCAGTACACTTaGCACTGGCACAGCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WSPSTDNHSYSRGILWLSPDQYT*HWHSLM Trigger: CATCAGGCTGTGCCAGTGCAAAGTGTACTGGTCAGG...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | GGGTTTATCTGTAGTGGTTCTTTTAACATTGGAGTTAATCTGGAGTGCACAGTATTTCCCACACTGCAGTaGCCCACGCTGGCTGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFICSGSFNIGVNLECTVFPTLQ*PTLAGA Trigger: GGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAAA...TACTGTGCACTCCAGATTAACTCCAATGTTAAAAGAACCACTACAGATAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCAGCTTCTGCTTCTCGTaGGTGATATGCTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: WSPSTDNHSYSRGILWLSSFCFS*VICSGP Trigger: AGGTCCAGAGCATATCACCAACGAGAAGCAGAAGCT...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCGCTCACCGTCATAGTTaGCCCATACTCCTTCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: IGKLRAPGDLVSTKTRESAHRHS*PILLPT Trigger: CGTGGGAAGGAGTATGGGCAAACTATGACGGTGAGC...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS-3UTR CAA 90 bp | TGGAGTCCCTCCACTGACAACCATTCTTACTCTCGTGGAATCCTTTGGCTTTCCGCAACGATGTTATCTTaGATGTCTGGAGTGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: WSPSTDNHSYSRGILWLSATMLS*MSGVEI Trigger: GATCTCCACTCCAGACATCAAAGATAACATCGTTGC...GGAAAGCCAAAGGATTCCACGAGAGTAAGAATGGTTGTCAGTGGAGGGACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCGCCATGGGAGAACCGTaGATGTTCAGGAAGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGNKSKTNSFDFPSWQSVAMGEP*MFRKGK Trigger: CTTCCCCTTCCTGAACATCAACGGTTCTCCCATGGC...GACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTATTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGGTTTTCTTCCTCTTGTaGGGGGCTGTGCCGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKVFFLL*GAVPRG Trigger: GCCACGCGGCACAGCCCCCAACAAGAGGAAGAAAAC...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | GTCACCATCTTCTCCTTTAATACTTACTTTATGAGCTTTTACTCCACACACAGGTCCAGAGGTTCTGTTTaGGGCCACACTGATTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTIFSFNTYFMSFYSTHRSRGSV*GHTDSG Trigger: CCCCGAATCAGTGTGGCCCAAAACAGAACCTCTGGA...CCTGTGTGTGGAGTAAAAGCTCATAAAGTAAGTATTAAAGGAGAAGATGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | ATAAATCTAAGACAAACAGTTTTGACTTTCCAAGTTGGCAGTCAGTCAAGCAGACCAGCTCTCCTGGGTTaGAAGGATGCGGTACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INLRQTVLTFQVGSQSSRPALLG*KDAVQL Trigger: CAGCTGTACCGCATCCTTCAAACCCAGGAGAGCTGG...TCTGCTTGACTGACTGCCAACTTGGAAAGTCAAAACTGTTTGTCTTAGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | TCGAGTCAGAGTTTTAAGGCCAAATGCAATTTTGGGCATCATTCCAAACCTTTTGGGATCTGGAAGCGTTaGGAATCTCTGTGTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSQSFKAKCNFGHHSKPFGIWKR*ESLCSQ Trigger: CTGGCTACACAGAGATTCCAAACGCTTCCAGATCCC...AAAAGGTTTGGAATGATGCCCAAAATTGCATTTGGCCTTAAAACTCTGACTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGACCCATCTTACTTTTCATCTAAGTCTTGGAATTCAAATTATGAGAAGGGTGTTTTCTTCCTCTaGTTGGGGGCTGTGCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRDPSYFSSKSWNSNYEKGVFFL*LGAVPR Trigger: ACGCGGCACAGCCCCCAACAAGAGGAAGAAAACACC...CTTCTCATAATTTGAATTCCAAGACTTAGATGAAAAGTAAGATGGGTCTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | ATTGGGAAACTTAGAGCTCCTGGGGACTTGGTATCTACTAAAACCAGAGAAAGCGGGGATGTCACACACTaGATAGATCTTCACAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IGKLRAPGDLVSTKTRESGDVTH*IDLHRI Trigger: AATCCTGTGAAGATCTATCAAGTGTGTGACATCCCC...GCTTTCTCTGGTTTTAGTAGATACCAAGTCCCCAGGAGCTCTAAGTTTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | CATAGCCCTCAGAACATATTTTTCAACATTCTTTACCAGATCCTGTTGTCTGGATTCATGGGCACTTCCTaGGTGCCATCGTACATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSPQNIFFNILYQILLSGFMGTS*VPSYIK Trigger: CTTGATGTACGATGGCACCAAGGAAGTGCCCATGAA...TCCAGACAACAGGATCTGGTAAAGAATGTTGAAAAATATGTTCTGAGGGCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
||
| CDS-3UTR CAA 90 bp | GTATCAGACACTGCTAAAGACCTGGCAATAAATCTAAGACAAACAGTTTTGACTATGACATCCAACAGCTaGCTGGTGAACAGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VSDTAKDLAINLRQTVLTMTSNS*LVNSFC Trigger: GCAGAAGCTGTTCACCAGCAAGCTGTTGGATGTCAT...AGTCAAAACTGTTTGTCTTAGATTTATTGCCAGGTCTTTAGCAGTGTCTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 72 bp | TGGGCCACACTGATTCGGGGCTGCAGTTTCCCACACTaGAGTTGCCCACGCTGGCTGGCGCCATGGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: WATLIRGCSFPH*SCPRWLAPWEN Trigger: GTTCTCCCATGGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGTGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | CACACTGATTCGGGGCTGCAGTTTCCCACACTGCAGTaGCCCACGCTGGCTGGCGCCATGGGAGAACCGTTG | + |
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Preference number: 6 (lower is better) Translates to: HTDSGLQFPTLQ*PTLAGAMGEPL Trigger: CAACGGTTCTCCCATGGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | GGGGGCAGGCTGCATGGGCTGCCAGCTCTCCTGGGTTaGAAGGATGCGGTACAGCTGCTTGAGCTGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GGRLHGLPALLG*KDAVQLLELSN Trigger: GTTGCTCAGCTCAAGCAGCTGTACCGCATCCTTCAAACCCAGGAGAGCTGGCAGCCCATGCAGCCTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 90 bp | GTTTTGGGCCACACTGATTCGGGGCTGCAGTTTCCCACACTGCAGTaGCCCACGCTGGCTGGCGCCATGGGAGAACCGTTGATGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLGHTDSGLQFPTLQ*PTLAGAMGEPLMFR Trigger: CCTGAACATCAACGGTTCTCCCATGGCGCCAGCCAGCGTGGGCAACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGTGGCCCAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS TCA 72 bp | CAGGTTAGGAGCAGCAAGCGAGGGAGCACATGGCCCTaGCCAGTACACTTTGCACTGGCACAGCCTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: QVRSSKRGSTWP*PVHFALAQPDG Trigger: GCCATCAGGCTGTGCCAGTGCAAAGTGTACTGGTCAGGGCCATGTGCTCCCTCGCTTGCTGCTCCTAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 90 bp | CTGCATGCTGGGGGCAGGCTGCATGGGCTGCCAGCTCTCCTGGGTTaGAAGGATGCGGTACAGCTGCTTGAGCTGAGCAACGATGTTATC | + |
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Preference number: 6 (lower is better) Translates to: LHAGGRLHGLPALLG*KDAVQLLELSNDVI Trigger: GATAACATCGTTGCTCAGCTCAAGCAGCTGTACCGCATCCTTCAAACCCAGGAGAGCTGGCAGCCCATGCAGCCTGCCCCCAGCATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS TCA 72 bp | GGATCTGGAAGCGTTTGGAATCTCTGTGTAGCCAGATaGGACCAGGGTAGAGGCCACTGTCCACCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSGSVWNLCVAR*DQGRGHCPPGP Trigger: TGGCCCAGGTGGACAGTGGCCTCTACCCTGGTCTCATCTGGCTACACAGAGATTCCAAACGCTTCCAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 72 bp | TCGTTGGTGATATGCTCTGGACCTGGGAACTTGACCTaGTCCAGGCTGACAGGACCAAAGAGCTCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVICSGPGNLT*SRLTGPKSSSW Trigger: CCAGGAGGAGCTCTTTGGTCCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | TGGGGGCTGTGCCGCGTGGCATGTTTCCAGGGGATCTaGAAGCGTTTGGAATCTCTGTGTAGCCAGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: WGLCRVACFQGI*KRLESLCSQMR Trigger: TCTCATCTGGCTACACAGAGATTCCAAACGCTTCCAGATCCCCTGGAAACATGCCACGCGGCACAGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | GGTGCCTGGGGTACTTCCATCTCCAGAGGTTCTGTTTaGGGCCACACTGATTCGGGGCTGCAGTTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: GAWGTSISRGSV*GHTDSGLQFPT Trigger: TGTGGGAAACTGCAGCCCCGAATCAGTGTGGCCCAAAACAGAACCTCTGGAGATGGAAGTACCCCAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | GTTGAGAGCACAGCGGAGCTGAGCCTTCCATTTAGCTaGGTCAGGATCGTCTACCCCTTCCTGGTACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VESTAELSLPFS*VRIVYPFLVLS Trigger: GGAAAGTACCAGGAAGGGGTAGACGATCCTGACCCAGCTAAATGGAAGGCTCAGCTCCGCTGTGCTCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | GGTGAACAGCTTCTGCTTCTCGTTGGTGATATGCTCTaGACCTGGGAACTTGACCTGCTCCAGGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GEQLLLLVGDML*TWELDLLQADR Trigger: CCTGTCAGCCTGGAGCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAAGCAGAAGCTGTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 90 bp | CCGCTGACCTCCAGGATCAGTCCCCTGTCCATGACATCCAACAGCTaGCTGGTGAACAGCTTCTGCTTCTCGTTGGTGATATGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PLTSRISPLSMTSNS*LVNSFCFSLVICSG Trigger: TCCAGAGCATATCACCAACGAGAAGCAGAAGCTGTTCACCAGCAAGCTGTTGGATGTCATGGACAGGGGACTGATCCTGGAGGTCAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 72 bp | TTCAGGAAGGGGAAGGTGTCCTGGATGGGGACATGGTaGTGTGACTGCTCAAGTTCATCCTCCTCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: FRKGKVSWMGTW*CDCSSSSSSSS Trigger: AGATGAGGAGGAGGATGAACTTGAGCAGTCACAGCACCATGTCCCCATCCAGGACACCTTCCCCTTCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS TCA 72 bp | TTGAACTCCCTGCTTTTGTTGAGAGCACAGCGGAGCTaGGCCTTCCATTTAGCTGGGTCAGGATCGTCTACC | + |
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Preference number: 6 (lower is better) Translates to: LNSLLLLRAQRS*AFHLAGSGSST Trigger: GGTAGACGATCCTGACCCAGCTAAATGGAAGGCTCAGCTCCGCTGTGCTCTCAACAAAAGCAGGGAGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS GCA 72 bp | GCAACGATGTTATCTTTGATGTCTGGAGTGGAGATCTaGAGGCGAACGCTGCCACTGTCAAAGGACCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: ATMLSLMSGVEI*RRTLPLSKDRV Trigger: TACCCGGTCCTTTGACAGTGGCAGCGTTCGCCTGCAGATCTCCACTCCAGACATCAAAGATAACATCGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | TCCAACAGCTTGCTGGTGAACAGCTTCTGCTTCTCGTaGGTGATATGCTCTGGACCTGGGAACTTGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SNSLLVNSFCFS*VICSGPGNLTC Trigger: GCAGGTCAAGTTCCCAGGTCCAGAGCATATCACCAACGAGAAGCAGAAGCTGTTCACCAGCAAGCTGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 90 bp | TCCTGGATTAATGACAGAGCCCTGGGTCTGGGGGATGTCACACACTaGATAGATCTTCACAGGATTCATGGGCACTTCCTTGGTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SWINDRALGLGDVTH*IDLHRIHGHFLGAI Trigger: GATGGCACCAAGGAAGTGCCCATGAATCCTGTGAAGATCTATCAAGTGTGTGACATCCCCCAGACCCAGGGCTCTGTCATTAATCCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | TTCCATTTAGCTGGGTCAGGATCGTCTACCCCTTCCTaGTACTTTCCGGTCTCCACAGCCCAAGCCTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: FHLAGSGSSTPS*YFPVSTAQALK Trigger: TTTTAAGGCTTGGGCTGTGGAGACCGGAAAGTACCAGGAAGGGGTAGACGATCCTGACCCAGCTAAATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | TTCATGGGCACTTCCTTGGTGCCATCGTACATCAAGTaGAACTCCCTGCTTTTGTTGAGAGCACAGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FMGTSLVPSYIK*NSLLLLRAQRS Trigger: GCTCCGCTGTGCTCTCAACAAAAGCAGGGAGTTCAACTTGATGTACGATGGCACCAAGGAAGTGCCCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CAA 72 bp | TCCAGGATCAGTCCCCTGTCCATGACATCCAACAGCTaGCTGGTGAACAGCTTCTGCTTCTCGTTGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: SRISPLSMTSNS*LVNSFCFSLVI Trigger: TATCACCAACGAGAAGCAGAAGCTGTTCACCAGCAAGCTGTTGGATGTCATGGACAGGGGACTGATCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | TCAAAAGGCGGCTGCTTCTCTATCTGTCCTTTCTGGTaGGCAATGAGCTCACTCAGGAAGGTTTCCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SKGGCFSICPFW*AMSSLRKVSRQ Trigger: TTGTCTGGAAACCTTCCTGAGTGAGCTCATTGCCCACCAGAAAGGACAGATAGAGAAGCAGCCGCCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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| CDS CCA 72 bp | ATCTCAAAAGGCGGCTGCTTCTCTATCTGTCCTTTCTaGTGGGCAATGAGCTCACTCAGGAAGGTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ISKGGCFSICPF*WAMSSLRKVSR Trigger: TCTGGAAACCTTCCTGAGTGAGCTCATTGCCCACCAGAAAGGACAGATAGAGAAGCAGCCGCCTTTTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076521.7 |
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