Pregenerated sensors for IRF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029771Ensembl transcript IDs: ENSMUST00000004392.12, ENSMUST00000163511.7, ENSMUST00000164626.8, ENSMUST00000164922.3, ENSMUST00000167252.5
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTaGTTCCAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: NETSGLSSMFLLPRL*FQETQNPVASQACW Trigger: CCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 90 bp | CATTTCTTCCCAGCCAGGCATATTAGAGAAATCACCAGAAGGTGGTaGTCAAATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HFFPARHIREITRRW*SNRKCLGEMKPQAS Trigger: AGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATGCCTGGCTGGGAAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCGTAGCCAGCCAGGCCTaGTGGGGCCACCACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: GKVQTRGPLNQGYSLQKAVASQA*WGHHIA Trigger: AGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTAC...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTCCCCACAACACTCCTTaGCAGGTTTTGCTAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGPHNTP*QVLLEE Trigger: TTCTTCTAGCAAAACCTGCCAAGGAGTGTTGTGGGG...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR CCA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAAGCCAGCCAGGCCTGCTaGGGCCACCACATTGCTATA | + |
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Preference number: 2 (lower is better) Translates to: HIREITRRWCSNRKCLGEASQAC*GHHIAI Trigger: TATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGC...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCAGACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGATCACCAGAAGGTGGTaGTCAAATAGAAAATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: ASQTLKEGAWRNPCHKDEITRRW*SNRKCL Trigger: TAAACATTTTCTATTTGAGCACCACCTTCTGGTGAT...CTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGTCTGAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 72 bp | CCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTaGTATATCAGTCTACGTGGCTGTCCCAGGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PCSQPGLLGPPH*YISLRGCPRRS Trigger: GGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR CCA 72 bp | CCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTaGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAGATTLLYQST*LSQEVQGSHYL Trigger: CAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR CCA 72 bp | CAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTGCTaGGGCCACCACATTGCTATATCAGTCTACGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QETQNPVASQAC*GHHIAISVYVA Trigger: AGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 72 bp | TTCCAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTaGTGGGGCCACCACATTGCTATATCAGTCTACGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQETQNPVASQA*WGHHIAISVYV Trigger: CACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 72 bp | CTCAGGCTAGTGATGTTCCCTCCCTCCCACTGGGGCTaGTGGCTTCATTTCTTCCCAGCCAGGCATATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRLVMFPPSHWG*WLHFFPARHIR Trigger: TCTAATATGCCTGGCTGGGAAGAAATGAAGCCAGCAGCCCCAGTGGGAGGGAGGGAACATCACTAGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR CAA 90 bp | GTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGATGTTCCCTCCCTCCGCTGGGGCCACCACATaGCTATATCAGTCTACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VIGLRGTKGLRLVMFPPSAGATT*LYQSTW Trigger: CCACGTAGACTGATATAGCAATGTGGTGGCCCCAGC...GGAGGGAGGGAACATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTGGCTACCCTGGGGTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGCTGGGGCCACCACATaGCTATATCAGTCTACGTGG | + |
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Preference number: 3 (lower is better) Translates to: KVGYPGVIGLRGTKGLRLAGATT*LYQSTW Trigger: CCACGTAGACTGATATAGCAATGTGGTGGCCCCAGC...TAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTACCCCAGGGTAGCCAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 72 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTaGTTCCAAGAGACTCAGAACCCTGTAGCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGLSSMFLLPRL*FQETQNPVASQ Trigger: CTGGCTGGCTACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR GCA 72 bp | CCAGCCAGGCATATTAGAGAAATCACCAGAAGGTGGTaGTCAAATAGAAAATGTTTAGGGGAAATGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: PARHIREITRRW*SNRKCLGEMKP Trigger: AGGTTTCATTTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATGCCTGGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| 3UTR CCA 72 bp | TTCCCAGCCAGGCATATTAGAGAAATCACCAGAAGGTaGTGCTCAAATAGAAAATGTTTAGGGGAAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPARHIREITRR*CSNRKCLGEMK Trigger: TTTCATTTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATGCCTGGCTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCCCAGGGCCCCTGGCTTaGATCGAGGCCTGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPPGPLA*IEACHR Trigger: CCTGTGGCAGGCCTCGATGCAAGCCAGGGGCCCTGG...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCTTGGGGCAGGAGCCATaGGCCAAGGCGCAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPLGQEP*AKAQGP Trigger: TGGGCCCTGCGCCTTGGCCCATGGCTCCTGCCCCAA...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR TCA 90 bp | CTGCTTCCAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCATCCCCGTTGACCCACTaGAGCCCTGGGTACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPRDSEPCSQPGLLGPPSPLTH*SPGYWQ Trigger: CTGCCAGTACCCAGGGCTTCAGTGGGTCAACGGGGA...TGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTGGAAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | GACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCGGTGAGGGTCCGGGGTaGGCGTCCCCGGTACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DSEPCSQPGLLGPPHCYIGEGPG*ASPVLE Trigger: TTCCAGTACCGGGGACGCGCACCCCGGACCCTCACC...GATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | TGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCGGTGAGGGTCCGGGGTaGGCGTCCCCGGTACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSQPGLLGPPHCYISLRGGEGPG*ASPVLE Trigger: TTCCAGTACCGGGGACGCGCACCCCGGACCCTCACC...GCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCTGCCAACTGGGTGCATaGGCCAGGGCCCCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPCQLGA*ARAPGL Trigger: CAAGCCAGGGGCCCTGGCCCATGCACCCAGTTGGCA...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCCCTGCAGCTGCAGGATaGGCCCACGGTCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPPAAAG*AHGPGH Trigger: ATGTCCTGGACCGTGGGCTCATCCTGCAGCTGCAGG...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | GACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCGCTTGCATCGAGGCCTaGCACAGGAGGGGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSEPCSQPGLLGPPHCYIACIEA*HRRGLD Trigger: GTCCAGGCCCCTCCTGTGGCAGGCCTCGATGCAAGC...GATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCCAGGAGATTTGGGTCTaGGACAGGGGGACCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPQEIWV*DRGTQP Trigger: GGGCTGGGTCCCCCTGTCCCAGACCCAAATCTCCTG...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | ATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTGTAGCCTCTTGGGGCAGGAGCCATaGGCCAAGGCGCAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ISLRGCPRRSKAATICSLLGQEP*AKAQGP Trigger: TGGGCCCTGCGCCTTGGCCCATGGCTCCTGCCCCAA...GAGGCTACAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCGTGTTGTCCCCATCCTaGCTGGGACCATGCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QPGLLGPPHCYISLRGCPVLSPS*LGPCLV Trigger: CACGAGGCATGGTCCCAGCCAGGATGGGGACAACAC...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR TCA 90 bp | CCAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCGTTTCTTTTCCCCGTTaGCCCACTGAAGCCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PRDSEPCSQPGLLGPPHCVSFPR*PTEALG Trigger: ACCCAGGGCTTCAGTGGGTCAACGGGGAAAAGAAAC...GCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTGCATGCCAACTGGGTaGATGGGCCAGGGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHCMPTG*MGQGPW Trigger: CCAGGGGCCCTGGCCCATGCACCCAGTTGGCATGCA...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | TGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGGCAGCTGTTCACCTaGGCCACCAACCAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CSQPGLLGPPHCYISLRGWQLFT*ATNQGF Trigger: GAAGCCCTGGTTGGTGGCCCAGGTGAACAGCTGCCA...GCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTCAGGAGATTTGGGTCTaGGACAGGGGGACCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATQEIWV*DRGTQP Trigger: GGGCTGGGTCCCCCTGTCCCAGACCCAAATCTCCTG...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | TGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCGAGCCTGCAGCCTTGTaGGTTGCTGATGGTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: CSQPGLLGPPHCYISLRGEPAAL*VADGEG Trigger: ACCCTCACCATCAGCAACCCACAAGGCTGCAGGCTC...GCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACGAGGGGCCTGGACCATaGGCTGCAATTGCTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHEGPGP*AAIAAG Trigger: CCCAGCAGCAATTGCAGCCCATGGTCCAGGCCCCTC...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | ATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTGTAGCCTCGACCCACTGAAGCCCTaGGTACTGGCAGCTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISLRGCPRRSKAATICSLDPLKP*VLAAVH Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAGTGGGTC...GAGGCTACAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | ATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTGTAGCCTCTGGGAGCAGGGCCGTTaGAGCAGACCTCGTAGATCT | + |
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Preference number: 4 (lower is better) Translates to: ISLRGCPRRSKAATICSLWEQGR*SRPRRS Trigger: AGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCA...GAGGCTACAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTAGCCCTACAGGTGGCTaGAGAGCAGGTGGCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATSPTGG*RAGGHL Trigger: CAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGCT...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR TCA 90 bp | GTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGATGTTCCCTCCCTCCGTCTTGACTTCCCGCTaGATGGGGTTGGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VIGLRGTKGLRLVMFPPSVLTSR*MGLGQE Trigger: CTCCTGCCCCAACCCCATTCAGCGGGAAGTCAAGAC...GGAGGGAGGGAACATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTACCATGGGCTGCAATTaGTGCTGGGACTGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATTMGCN*CWDCQR Trigger: CCTCTGGCAGTCCCAGCAGCAATTGCAGCCCATGGT...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTCCAGGGCCCCTGGCTTaGATCGAGGCCTGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCPGPLA*IEACHR Trigger: CCTGTGGCAGGCCTCGATGCAAGCCAGGGGCCCTGG...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR GCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTTGCATGCCAACTGGGTaGATGGGCCAGGGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGCMPTG*MGQGPW Trigger: CCAGGGGCCCTGGCCCATGCACCCAGTTGGCATGCA...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | GTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGATGTTCCCTCCCTCCTGGCAGCTGTTCACCTaGGCCACCAACCAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VIGLRGTKGLRLVMFPPSWQLFT*ATNQGF Trigger: GAAGCCCTGGTTGGTGGCCCAGGTGAACAGCTGCCA...GGAGGGAGGGAACATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTACCCTGGGGTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTATGGGTTGGCTCTCTGTaGGAGCAGGGCCGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVGYPGVIGLRGTKGLRLWVGSL*EQGRWS Trigger: GCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCA...TAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTACCCCAGGGTAGCCAACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACACTGGGGATGTCCTCTaGGCTAGGGAAGCGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHTGDVL*AREAHL Trigger: CAAGTGCGCTTCCCTAGCCCAGAGGACATCCCCAGT...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | GACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCCAGAACACCTTACACTaGCACAGACGGATGGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: DSEPCSQPGLLGPPHCYIQNTLH*HRRMAY Trigger: GTACGCCATCCGTCTGTGCCAGTGTAAGGTGTTCTG...GATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CCA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGCCCGCTGAATGGGGTTaGGGCAGGAGCCATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSMFLLPRLCFQETQPAEWG*GRSHGP Trigger: TGGCCCATGGCTCCTGCCCCAACCCCATTCAGCGGG...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTTATTGCATGCCAACTaGGTGCATGGGCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHLLHAN*VHGPGP Trigger: GGGCCCTGGCCCATGCACCCAGTTGGCATGCAATAA...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | ATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTGTAGCCTCCCAAGAAAGCTCCCCTaGGAACATCTCCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLRGCPRRSKAATICSLPRKLP*EHLQQQ Trigger: TTGCTGCTGGAGATGTTCTCAGGGGAGCTTTCTTGG...GAGGCTACAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTTGGCTACCCTGGGGTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGTTGTCCCCATCCTaGCTGGGACCATGCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVGYPGVIGLRGTKGLRLVLSPS*LGPCLV Trigger: CACGAGGCATGGTCCCAGCCAGGATGGGGACAACAC...TAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTACCCCAGGGTAGCCAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCTGCCAACTGGGTGCATaGGCCAGGGCCCCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKACQLGA*ARAPGL Trigger: CAAGCCAGGGGCCCTGGCCCATGCACCCAGTTGGCA...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCTCCCCGTTGACCCACTaGAGCCCTGGGTACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKASPLTH*SPGYWQ Trigger: CTGCCAGTACCCAGGGCTTCAGTGGGTCAACGGGGA...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTGTCTTGACTTCCCGCTaGATGGGGTTGGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETVLTSR*MGLGQE Trigger: CTCCTGCCCCAACCCCATTCAGCGGGAAGTCAAGAC...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTACCTCAGGGAGAAGCTaGCTGAAGCCAGCAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATTSGRS*LKPAGF Trigger: AAATCCTGCTGGCTTCAGGCAGCTTCTCCCTGAGGT...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | GCATCTCAGACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGCTAGGGAAGCGCACTTaGTCCAGGGTCACAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASQTLKEGAWRNPCHKDELGKRT*SRVTGP Trigger: TGGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAG...CTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGTCTGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCTAGGGAAGCGCACTTaGTCCAGGGTCACAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETLGKRT*SRVTGP Trigger: TGGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAG...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTGCCTGGACCATGGGCTaGAATTGCTGCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGAWTMG*NCCWDC Trigger: GCAGTCCCAGCAGCAATTGCAGCCCATGGTCCAGGC...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGGCCTGGACCATGGGCTaGAATTGCTGCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSMFLLPRLCFQETQAWTMG*NCCWDC Trigger: GCAGTCCCAGCAGCAATTGCAGCCCATGGTCCAGGC...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTTGTCCCCATCCTGGCTaGGACCATGCCTCGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGCPHPG*DHASWH Trigger: ATGCCACGAGGCATGGTCCCAGCCAGGATGGGGACA...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCTGGGTTGGCTCTCTGTaGGAGCAGGGCCGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKAWVGSL*EQGRWS Trigger: GCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCA...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAAGCCCTACAGGTGGCTaGAGAGCAGGTGGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QASLLCSCYPDSASKRLRSPTGG*RAGGHL Trigger: CAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGCT...TCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGGGTTCTGTAGGGGGCTaGCTGGAAGCCAGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSGLSSMFLLPRLCFQEGSVGG*LEARGP Trigger: TGGACCTCTGGCTTCCAGCCAGCCCCCTACAGAACC...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACGTCAAAGGCAACATGTaGGGGCTGATCAGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHVKGNM*GLISRS Trigger: TGACCTGCTGATCAGCCCCCACATGTTGCCTTTGAC...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTGTCAAAGGCAACATGTaGGGGCTGATCAGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATVKGNM*GLISRS Trigger: TGACCTGCTGATCAGCCCCCACATGTTGCCTTTGAC...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTGGCACAGACGGATaGCGTACAGGTCCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGLSSMFLLPRLCFQETGTDG*RTGPGP Trigger: AGGGCCAGGACCTGTACGCCATCCGTCTGTGCCAGT...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGACAGGGAGAAGCTGCCTaGAGCCAGCAGGATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QASLLCSCYPDSASKRLRQGEAA*SQQDFQ Trigger: CTGGAAATCCTGCTGGCTTCAGGCAGCTTCTCCCTG...TCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTGCAACATGTGGGGGCTaGTCAGCAGGTCAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETATCGG*SAGQAR Trigger: TCTTGCCTGACCTGCTGATCAGCCCCCACATGTTGC...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | GTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGATGTTCCCTCCCTCCCCAAGAAAGCTCCCCTaGGAACATCTCCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VIGLRGTKGLRLVMFPPSPRKLP*EHLQQQ Trigger: TTGCTGCTGGAGATGTTCTCAGGGGAGCTTTCTTGG...GGAGGGAGGGAACATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGTGGGACCATGCCTCGTaGCATGGCGCCAGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGLSSMFLLPRLCFQEWDHAS*HGARVY Trigger: ATATACCCTGGCGCCATGCCACGAGGCATGGTCCCA...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTTGTCCCCATCCTGGCTaGGACCATGCCTCGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCCPHPG*DHASWH Trigger: ATGCCACGAGGCATGGTCCCAGCCAGGATGGGGACA...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTTGGGAGCAGGGCCGTTaGAGCAGACCTCGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETWEQGR*SRPRRS Trigger: AGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCA...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCACTTGGTGTCTTCTTTaGGTAAGGAATAGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSEPCSQPGLLGPPHCYITWCLL*VRNRVR Trigger: ACGCACCCTATTCCTTACCCAAAGAAGACACCAAGT...GATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTGGTTCTGTAGGGGGCTaGCTGGAAGCCAGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCGSVGG*LEARGP Trigger: TGGACCTCTGGCTTCCAGCCAGCCCCCTACAGAACC...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GCATCTCAGACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGCGCGTCCCCGGTACTaGAACTTGATCTCTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASQTLKEGAWRNPCHKDEARPRY*NLISRS Trigger: GGACCTAGAGATCAAGTTCCAGTACCGGGGACGCGC...CTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGTCTGAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCATGGCGTACAGGTCCTaGCCCTGCAGCTGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKAMAYRS*PCSCRM Trigger: CATCCTGCAGCTGCAGGGCCAGGACCTGTACGCCAT...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTAGTGATGTTCCCTCCCTCCGGTGGGGTATTAGTCTaGCCCTTCTGGAACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VIGLRGTKGLRLVMFPPSGGVLV*PFWNRM Trigger: CATCCTGTTCCAGAAGGGCCAGACTAATACCCCACC...GGAGGGAGGGAACATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCGCAACATGTGGGGGCTaGTCAGCAGGTCAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKAATCGG*SAGQAR Trigger: TCTTGCCTGACCTGCTGATCAGCCCCCACATGTTGC...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCACCATGGGCTGCAATTaGTGCTGGGACTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKATMGCN*CWDCQR Trigger: CCTCTGGCAGTCCCAGCAGCAATTGCAGCCCATGGT...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGTTCAAACTAGGGGACCCCTAAATCAGGGTTATTCTCTGCAGAAAGCCACTGGGGATGTCCTCTaGGCTAGGGAAGCGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKVQTRGPLNQGYSLQKATGDVL*AREAHL Trigger: CAAGTGCGCTTCCCTAGCCCAGAGGACATCCCCAGT...GGCTTTCTGCAGAGAATAACCCTGATTTAGGGGTCCCCTAGTTTGAACCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTTAGTCTGGCCCTTCTaGAACAGGATGAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHLVWPF*NRMSSL Trigger: CAATGAGCTCATCCTGTTCCAGAAGGGCCAGACTAA...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTTTATTGCATGCCAACTaGGTGCATGGGCCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCLLHAN*VHGPGP Trigger: GGGCCCTGGCCCATGCACCCAGTTGGCATGCAATAA...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTATCTGTAGCCTCAGCTCATTGAGAAACTaGTCTAGGCTAAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLRGCPRRSKAATICSLSSLRN*SRLKSF Trigger: GAAGCTCTTTAGCCTAGAGCAGTTTCTCAATGAGCT...GAGGCTACAGATAGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTACTTGGTGTCTTCTTTaGGTAAGGAATAGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHCYISLRGCPRRSKAATTWCLL*VRNRVR Trigger: ACGCACCCTATTCCTTACCCAAAGAAGACACCAAGT...AGTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTTGGCTGGAGAGCAGGTaGCCACTTGGTGTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGWLESR*PLGVFF Trigger: AAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCA...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGATGGCTGGAGAGCAGGTaGCCACTTGGTGTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QASLLCSCYPDSASKRLRWLESR*PLGVFF Trigger: AAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCA...TCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTCAGAACACCTTACACTaGCACAGACGGATGGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGQNTLH*HRRMAY Trigger: GTACGCCATCCGTCTGTGCCAGTGTAAGGTGTTCTG...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGTCTTCTCTCGGGGTTTaGCATCAGGCCATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSMFLLPRLCFQETQSSLGV*HQAILL Trigger: GAGAAGAATGGCCTGATGTCAAACCCCGAGAGAAGA...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTACCTCAGGGAGAAGCTaGCTGAAGCCAGCAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCTSGRS*LKPAGF Trigger: AAATCCTGCTGGCTTCAGGCAGCTTCTCCCTGAGGT...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCGAGGGGCCTGGACCATaGGCTGCAATTGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NILNSTFCPSISDSEGGCEGPGP*AAIAAG Trigger: CCCAGCAGCAATTGCAGCCCATGGTCCAGGCCCCTC...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | TCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTAGCCCTACCATGTGGTCTTTaGGATCCGGGTTTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SMFLLPRLCFQETQNPVALPCGL*DPGLRS Trigger: AGATCTCAAACCCGGATCTCAAAGACCACATGGTAG...GGCTACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCTACCATGTGGTCTTTaGGATCCGGGTTTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETLPCGL*DPGLRS Trigger: AGATCTCAAACCCGGATCTCAAAGACCACATGGTAG...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTGAACGTAATCATCAGTaGGTTGGCTCTCTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCERNHQ*VGSLWE Trigger: CTCCCACAGAGAGCCAACCCACTGATGATTACGTTC...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCATGGCGTACAGGTCCTaGCCCTGCAGCTGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NILNSTFCPSISDSEGGCMAYRS*PCSCRM Trigger: CATCCTGCAGCTGCAGGGCCAGGACCTGTACGCCAT...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAACCCGCTGAATGGGGTTaGGGCAGGAGCCATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIREITRRWCSNRKCLGEPAEWG*GRSHGP Trigger: TGGCCCATGGCTCCTGCCCCAACCCCATTCAGCGGG...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGATTAGTCTGGCCCTTCTaGAACAGGATGAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QASLLCSCYPDSASKRLRLVWPF*NRMSSL Trigger: CAATGAGCTCATCCTGTTCCAGAAGGGCCAGACTAA...TCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTGATCTCAAAAGGTGGTaGGGTATTAGTCTGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLSSMFLLPRLCFQETDLKRW*GISLAL Trigger: AAGGGCCAGACTAATACCCCACCACCTTTTGAGATC...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| 3UTR CAA 72 bp | AGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTaGTTACCCCGACTCTGCTTCCAAGAGACTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGNETSGLSSMF*LPRLCFQETQN Trigger: GTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAACCTGCAGCTGCAGGATaGGCCCACGGTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HIREITRRWCSNRKCLGEPAAAG*AHGPGH Trigger: ATGTCCTGGACCGTGGGCTCATCCTGCAGCTGCAGG...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCGACCCACTGAAGCCCTaGGTACTGGCAGCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NILNSTFCPSISDSEGGCDPLKP*VLAAVH Trigger: GTGAACAGCTGCCAGTACCCAGGGCTTCAGTGGGTC...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGAACTGCTCTACCATGTaGTCTTTGAGATCCGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGLSSMFLLPRLCFQENCSTM*SLRSGF Trigger: AAACCCGGATCTCAAAGACCACATGGTAGAGCAGTT...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACTGCTCTACCATGTaGTCTTTGAGATCCGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSMFLLPRLCFQETQNCSTM*SLRSGF Trigger: AAACCCGGATCTCAAAGACCACATGGTAGAGCAGTT...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAGCTCATTGAGAAACTaGTCTAGGCTAAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLSSMFLLPRLCFQETQSSLRN*SRLKSF Trigger: GAAGCTCTTTAGCCTAGAGCAGTTTCTCAATGAGCT...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTACTGGCACAGACGGATaGCGTACAGGTCCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRKCLGEMKPQASLLCSCTGTDG*RTGPGP Trigger: AGGGCCAGGACCTGTACGCCATCCGTCTGTGCCAGT...ACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR GCA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCCCAAAGAGTTCCACTTaGTCCTGGGTAGCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NILNSTFCPSISDSEGGCPKSST*SWVASS Trigger: GCTAGAGGCTACCCAGGAGCAAGTGGAACTCTTTGG...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAAGCGCGTCCCCGGTACTaGAACTTGATCTCTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIREITRRWCSNRKCLGEARPRY*NLISRS Trigger: GGACCTAGAGATCAAGTTCCAGTACCGGGGACGCGC...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAAGAGCCTGCAGCCTTGTaGGTTGCTGATGGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIREITRRWCSNRKCLGEEPAAL*VADGEG Trigger: ACCCTCACCATCAGCAACCCACAAGGCTGCAGGCTC...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | AATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTGTTTCTTTTCCCCGTTaGCCCACTGAAGCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRKCLGEMKPQASLLCSCVSFPR*PTEALG Trigger: ACCCAGGGCTTCAGTGGGTCAACGGGGAAAAGAAAC...ACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR TCA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCTCTTCTCTCGGGGTTTaGCATCAGGCCATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NILNSTFCPSISDSEGGCSSLGV*HQAILL Trigger: GAGAAGAATGGCCTGATGTCAAACCCCGAGAGAAGA...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTGGTGGGGTATTAGTCTaGCCCTTCTGGAACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NRKCLGEMKPQASLLCSCGGVLV*PFWNRM Trigger: CATCCTGTTCCAGAAGGGCCAGACTAATACCCCACC...ACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTGAACGTAATCATCAGTaGGTTGGCTCTCTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRKCLGEMKPQASLLCSCERNHQ*VGSLWE Trigger: CTCCCACAGAGAGCCAACCCACTGATGATTACGTTC...ACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CCA 90 bp | AATAGAAAATGTTTAGGGGAAATGAAACCTCAGGCCTCTCTTCTATGTTCTTGTGATCTCAAAAGGTGGTaGGGTATTAGTCTGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRKCLGEMKPQASLLCSCDLKRW*GISLAL Trigger: AAGGGCCAGACTAATACCCCACCACCTTTTGAGATC...ACAAGAACATAGAAGAGAGGCCTGAGGTTTCATTTCCCCTAAACATTTTCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS CCA 90 bp | CTGCCTGAAGCCAGCAGGATTTCCAGAGGGAGGGGCCAGGAGATTTaGGTCTGGGACAGGGGGACCCAGCCCTACAGGTGGCTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPEASRISRGRGQEI*VWDRGTQPYRWLES Trigger: GCTCTCCAGCCACCTGTAGGGCTGGGTCCCCCTGTCCCAGACCCAAATCTCCTGGCCCCTCCCTCTGGAAATCCTGCTGGCTTCAGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | CAGGGGGACCCAGCCCTACAGGTGGCTGGAGAGCAGGTGGCCACTTaGTGTCTTCTTTGGGTAAGGAATAGGGTGCGTTGGGAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGDPALQVAGEQVAT*CLLWVRNRVRWEAQ Trigger: CTGGGCCTCCCAACGCACCCTATTCCTTACCCAAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGCTGGGTCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS-3UTR CAA 90 bp | GACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCGCTAGGGAAGCGCACTaGCTCCAGGGTCACAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSEPCSQPGLLGPPHCYIAREAH*LQGHRA Trigger: GGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAGC...GATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CAA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACGCCAGGGCCCCTGGCTaGCATCGAGGCCTGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHARAPG*HRGLPQ Trigger: CTGTGGCAGGCCTCGATGCAAGCCAGGGGCCCTGGC...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS GCA 90 bp | TGGCTGGAAGCCAGAGGTCCAGGCTCCAGGACCTCAGGGAGAAGCTaGCTGAAGCCAGCAGGATTTCCAGAGGGAGGGGCCAGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: WLEARGPGSRTSGRS*LKPAGFPEGGARRF Trigger: AAATCTCCTGGCCCCTCCCTCTGGAAATCCTGCTGGCTTCAGGCAGCTTCTCCCTGAGGTCCTGGAGCCTGGACCTCTGGCTTCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | GCCCTACAGGTGGCTGGAGAGCAGGTGGCCACTTGGTGTCTTCTTTaGGTAAGGAATAGGGTGCGTTGGGAGGCCCAGGTAGCGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALQVAGEQVATWCLL*VRNRVRWEAQVAQA Trigger: AGCCTGCGCTACCTGGGCCTCCCAACGCACCCTATTCCTTACCCAAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164922.3 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | CGTCAAAGGCAACATGTGGGGGCTGATCAGCAGGTCAGGCAAGAGTaGTTCTGTAGGGGGCTGGCTGGAAGCCAGAGGTCCAGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQRQHVGADQQVRQE*FCRGLAGSQRSRLQ Trigger: CTGGAGCCTGGACCTCTGGCTTCCAGCCAGCCCCCTACAGAACCACTCTTGCCTGACCTGCTGATCAGCCCCCACATGTTGCCTTTGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGGCCTGCTGGGGCCACCACATTGCTATATCAGTCTACGTGGCTGTCCCGACCATGGGCTGCAATaGCTGCTGGGACTGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPGLLGPPHCYISLRGCPDHGLQ*LLGLPE Trigger: CTCTGGCAGTCCCAGCAGCAATTGCAGCCCATGGTC...GGGACAGCCACGTAGACTGATATAGCAATGTGGTGGCCCCAGCAGGCCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS GCA 90 bp | CGCTGCTTGTCACTGGGGATGTCCTCTGGGCTAGGGAAGCGCACTTaGTCCAGGGTCACAGGGCCAAAGAGTTCCACTTGCTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RCLSLGMSSGLGKRT*SRVTGPKSSTCSWV Trigger: TACCCAGGAGCAAGTGGAACTCTTTGGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAGCCCAGAGGACATCCCCAGTGACAAGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | CCAGGTAGCGCAGGCTCTGTGATGCTCAGGCCTGGTAGCATTCTCTaGAGCTGTGGGAGCAGGGCCGTTGGAGCAGACCTCGTAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSAGSVMLRPGSIL*SCGSRAVGADLVDL Trigger: AAGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCACAGCTCCAGAGAATGCTACCAGGCCTGAGCATCACAGAGCCTGCGCTACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164922.3 |
||
| CDS TCA 90 bp | TTGAGAAACTGCTCTAGGCTAAAGAGCTTCGTCTTGACTTCCCGCTaGATGGGGTTGGGGCAGGAGCCATGGGCCAAGGCGCAGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNCSRLKSFVLTSR*MGLGQEPWAKAQGP Trigger: TGGGCCCTGCGCCTTGGCCCATGGCTCCTGCCCCAACCCCATTCAGCGGGAAGTCAAGACGAAGCTCTTTAGCCTAGAGCAGTTTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | AGCAGGGCCGTTGGAGCAGACCTCGTAGATCTTGTACGGCTGAGGTaGCATGTCCCGAGGGCCATCATAGAACAGCTGGAAGTCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRAVGADLVDLVRLR*HVPRAIIEQLEVTA Trigger: AGCCGTGACTTCCAGCTGTTCTATGATGGCCCTCGGGACATGCCACCTCAGCCGTACAAGATCTACGAGGTCTGCTCCAACGGCCCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164922.3 ENSMUST00000167252.5 |
||
| CDS-3UTR CAA 90 bp | CCAAGAGACTCAGAACCCTGTAGCCAGCCAGGCCTGCTGGGGCCACCACATTGCCCCCGGTACTGGAACTaGATCTCTAGGTCCGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRDSEPCSQPGLLGPPHCPRYWN*ISRSVK Trigger: TTTGACGGACCTAGAGATCAAGTTCCAGTACCGGGG...GCAATGTGGTGGCCCCAGCAGGCCTGGCTGGCTACAGGGTTCTGAGTCTCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTGCCAGGGCCCCTGGCTaGCATCGAGGCCTGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGARAPG*HRGLPQ Trigger: CTGTGGCAGGCCTCGATGCAAGCCAGGGGCCCTGGC...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS TCA 90 bp | GTAAGGAATAGGGTGCGTTGGGAGGCCCAGGTAGCGCAGGCTCTGTaGTGCTCAGGCCTGGTAGCATTCTCTGGAGCTCTTCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRNRVRWEAQVAQAL*CSGLVAFSGALPLP Trigger: AGGAAGAGGAAGAGCTCCAGAGAATGCTACCAGGCCTGAGCATCACAGAGCCTGCGCTACCTGGGCCTCCCAACGCACCCTATTCCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | GAACGTAATCATCAGTGGGTTGGCTCTCTGTGGGAGCAGGGCCGTTaGAGCAGACCTCGTAGATCTTGTACGGCTGAGGTGGCATGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERNHQWVGSLWEQGR*SRPRRSCTAEVACP Trigger: GGGACATGCCACCTCAGCCGTACAAGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCACTGATGATTACGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS CCA 90 bp | CCTCCTCTTCTCCCAGAACGTAATCATCAGTGGGTTGGCTCTCTGTaGGAGCAGGGCCGTTGGAGCAGACCTCGTAGATCTTGTACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPLLPERNHQWVGSL*EQGRWSRPRRSCTA Trigger: AGCCGTACAAGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCACTGATGATTACGTTCTGGGAGAAGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGGAGGGGCCAGGAGATTaGGGTCTGGGACAGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGLSSMFLLPRLCFQETQEGPGD*GLGQGD Trigger: GTCCCCCTGTCCCAGACCCAAATCTCCTGGCCCCTC...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CAA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGGCTAGGGAAGCGCACTaGCTCCAGGGTCACAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETSGLSSMFLLPRLCFQEAREAH*LQGHRA Trigger: GGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAGC...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CAA 90 bp | GCATCTCAGACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGCTGCAGCCTTGTGGGTaGCTGATGGTGAGGGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASQTLKEGAWRNPCHKDELQPCG*LMVRVR Trigger: CCGGACCCTCACCATCAGCAACCCACAAGGCTGCAG...CTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGTCTGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTAGGTTGGCCTTCCACTaGGCTGGGTCAGCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGRLAFH*AGSASS Trigger: GGATGAGGCTGACCCAGCCAAGTGGAAGGCCAACCT...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | ACTCTGAAGGAGGGTGCCTGGAGAAATCCTTGTCATAAGGATGAGGGGAAAGGTGCCTTGAAGATGGTGTaGTCCCCATCCTGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: TLKEGAWRNPCHKDEGKGALKMV*SPSWLG Trigger: TCCCAGCCAGGATGGGGACAACACCATCTTCAAGGC...ACCTTTCCCCTCATCCTTATGACAAGGATTTCTCCAGGCACCCTCCTTCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | GAAACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGGCCTTGAAGATGGTGTaGTCCCCATCCTGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ETSGLSSMFLLPRLCFQEALKMV*SPSWLG Trigger: TCCCAGCCAGGATGGGGACAACACCATCTTCAAGGC...CTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | CTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTAGGTTGGCCTTCCACTaGGCTGGGTCAGCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: LFYVLVTPTLLPRDSEPCRLAFH*AGSASS Trigger: GGATGAGGCTGACCCAGCCAAGTGGAAGGCCAACCT...ACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGGAAGAGCCTGCAGCCTaGTGGGTTGCTGATGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SGLSSMFLLPRLCFQETQEEPAA*WVADGE Trigger: CTCACCATCAGCAACCCACAAGGCTGCAGGCTCTTC...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTGAAGAGCCTGCAGCCTaGTGGGTTGCTGATGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: TSGLSSMFLLPRLCFQETEEPAA*WVADGE Trigger: CTCACCATCAGCAACCCACAAGGCTGCAGGCTCTTC...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | TCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTAGCCTGGAAGTCACGGCTTTaGTTAAGGGCACAGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SMFLLPRLCFQETQNPVAWKSRL*LRAQRR Trigger: CCTGCGCTGTGCCCTTAACAAAAGCCGTGACTTCCA...GGCTACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | ACCACATTGCTATATCAGTCTACGTGGCTGTCCCAGGAGGTCCAAGGCAGCCACTTCTTCTCTCGGGGTTaGACATCAGGCCATTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TTLLYQSTWLSQEVQGSHFFSRG*TSGHSS Trigger: AGAAGAATGGCCTGATGTCAAACCCCGAGAGAAGAA...GTGGCTGCCTTGGACCTCCTGGGACAGCCACGTAGACTGATATAGCAATGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS GCA 90 bp | TTAAACTGCTCTACCATGTGGTCTTTGAGATCCGGGTTTGAGATCTaGAGTCGGATGCTGTCTGCCGACCAAGAAAGCTCCCCTGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LNCSTMWSLRSGFEI*SRMLSADQESSPEN Trigger: GTTCTCAGGGGAGCTTTCTTGGTCGGCAGACAGCATCCGACTGCAGATCTCAAACCCGGATCTCAAAGACCACATGGTAGAGCAGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | AATATATTAAATTCTACTTTCTGTCCCAGCATCTCAGACTCTGAAGGAGGGTGCGAGGGGCCAGGAGATTaGGGTCTGGGACAGGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: NILNSTFCPSISDSEGGCEGPGD*GLGQGD Trigger: GTCCCCCTGTCCCAGACCCAAATCTCCTGGCCCCTC...GCACCCTCCTTCAGAGTCTGAGATGCTGGGACAGAAAGTAGAATTTAATATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | TCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGCCCCGGTACTGGAACTaGATCTCTAGGTCCGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SGLSSMFLLPRLCFQETQPRYWN*ISRSVK Trigger: TTTGACGGACCTAGAGATCAAGTTCCAGTACCGGGG...CTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | AAAGTTGGCTACCCTGGGGTAATTGGACTCCGTGGTACTAAAGGCCTCAGGCTATCTACCATGTGGTCTTaGAGATCCGGGTTTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: KVGYPGVIGLRGTKGLRLSTMWS*RSGFEI Trigger: GATCTCAAACCCGGATCTCAAAGACCACATGGTAGA...TAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTACCCCAGGGTAGCCAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | ACCTCAGGCCTCTCTTCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTTTCTTCTCTCGGGGTTaGACATCAGGCCATTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSGLSSMFLLPRLCFQETFFSRG*TSGHSS Trigger: AGAAGAATGGCCTGATGTCAAACCCCGAGAGAAGAA...AGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGAAGAGAGGCCTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | TCTATGTTCTTGTTACCCCGACTCTGCTTCCAAGAGACTCAGAACCCTGTAGCCTCTACCATGTGGTCTTaGAGATCCGGGTTTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: SMFLLPRLCFQETQNPVASTMWS*RSGFEI Trigger: GATCTCAAACCCGGATCTCAAAGACCACATGGTAGA...GGCTACAGGGTTCTGAGTCTCTTGGAAGCAGAGTCGGGGTAACAAGAACATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAACTGCAGCCTTGTGGGTaGCTGATGGTGAGGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: HIREITRRWCSNRKCLGELQPCG*LMVRVR Trigger: CCGGACCCTCACCATCAGCAACCCACAAGGCTGCAG...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS-3UTR CAA 90 bp | CATATTAGAGAAATCACCAGAAGGTGGTGCTCAAATAGAAAATGTTTAGGGGAAGACCATGGGCTGCAATaGCTGCTGGGACTGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HIREITRRWCSNRKCLGEDHGLQ*LLGLPE Trigger: CTCTGGCAGTCCCAGCAGCAATTGCAGCCCATGGTC...TTCCCCTAAACATTTTCTATTTGAGCACCACCTTCTGGTGATTTCTCTAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS CCA 72 bp | GCCAAGGCGCAGGGCCCACTCCAGAACACCTTACACTaGCACAGACGGATGGCGTACAGGTCCTGGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AKAQGPLQNTLH*HRRMAYRSWPC Trigger: GCAGGGCCAGGACCTGTACGCCATCCGTCTGTGCCAGTGTAAGGTGTTCTGGAGTGGGCCCTGCGCCTTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | GGGTCTGGGACAGGGGGACCCAGCCCTACAGGTGGCTaGAGAGCAGGTGGCCACTTGGTGTCTTCTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSGTGGPSPTGG*RAGGHLVSSLG Trigger: ACCCAAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGCTGGGTCCCCCTGTCCCAGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | TTAGCCCAGGCCTTGAAGATGGTGTTGTCCCCATCCTaGCTGGGACCATGCCTCGTGGCATGGCGCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LAQALKMVLSPS*LGPCLVAWRQG Trigger: ACCCTGGCGCCATGCCACGAGGCATGGTCCCAGCCAGGATGGGGACAACACCATCTTCAAGGCCTGGGCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164626.8 ENSMUST00000164922.3 ENSMUST00000167252.5 |
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| CDS CAA 72 bp | GTGAGGGTCCGGGGTGCGCGTCCCCGGTACTGGAACTaGATCTCTAGGTCCGTCAAAGGCAACATGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VRVRGARPRYWN*ISRSVKGNMWG Trigger: CCCCCACATGTTGCCTTTGACGGACCTAGAGATCAAGTTCCAGTACCGGGGACGCGCACCCCGGACCCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | ATCAGCAGGTCAGGCAAGAGTGGTTCTGTAGGGGGCTaGCTGGAAGCCAGAGGTCCAGGCTCCAGGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: ISRSGKSGSVGG*LEARGPGSRTS Trigger: TGAGGTCCTGGAGCCTGGACCTCTGGCTTCCAGCCAGCCCCCTACAGAACCACTCTTGCCTGACCTGCTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CAACATGTGGGGGCTGATCAGCAGGTCAGGCAAGAGTaGTTCTGTAGGGGGCTGGCTGGAAGCCAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QHVGADQQVRQE*FCRGLAGSQRS Trigger: GGACCTCTGGCTTCCAGCCAGCCCCCTACAGAACCACTCTTGCCTGACCTGCTGATCAGCCCCCACATGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS TCA 72 bp | CAGTCGGATGCTGTCTGCCGACCAAGAAAGCTCCCCTaGGAACATCTCCAGCAGCAACCGGGCTGCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: QSDAVCRPRKLP*EHLQQQPGCNR Trigger: CCTGTTGCAGCCCGGTTGCTGCTGGAGATGTTCTCAGGGGAGCTTTCTTGGTCGGCAGACAGCATCCGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS GCA 72 bp | TCACTGGGGATGTCCTCTGGGCTAGGGAAGCGCACTTaGTCCAGGGTCACAGGGCCAAAGAGTTCCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: SLGMSSGLGKRT*SRVTGPKSSTC Trigger: GCAAGTGGAACTCTTTGGCCCTGTGACCCTGGAGCAAGTGCGCTTCCCTAGCCCAGAGGACATCCCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CATCAGTGGGTTGGCTCTCTGTGGGAGCAGGGCCGTTaGAGCAGACCTCGTAGATCTTGTACGGCTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HQWVGSLWEQGR*SRPRRSCTAEV Trigger: CACCTCAGCCGTACAAGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCACTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CCTCCTCCTCCTCTTCTCCCAGAACGTAATCATCAGTaGGTTGGCTCTCTGTGGGAGCAGGGCCGTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PPPPLLPERNHQ*VGSLWEQGRWS Trigger: GCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCACTGATGATTACGTTCTGGGAGAAGAGGAGGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CTGATGGTGAGGGTCCGGGGTGCGCGTCCCCGGTACTaGAACTTGATCTCTAGGTCCGTCAAAGGCAACATG | + |
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Preference number: 6 (lower is better) Translates to: LMVRVRGARPRY*NLISRSVKGNM Trigger: CATGTTGCCTTTGACGGACCTAGAGATCAAGTTCCAGTACCGGGGACGCGCACCCCGGACCCTCACCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | GTGGCTGGAGAGCAGGTGGCCACTTGGTGTCTTCTTTaGGTAAGGAATAGGGTGCGTTGGGAGGCCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VAGEQVATWCLL*VRNRVRWEAQV Trigger: TACCTGGGCCTCCCAACGCACCCTATTCCTTACCCAAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164922.3 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CCAGCCCTACAGGTGGCTGGAGAGCAGGTGGCCACTTaGTGTCTTCTTTGGGTAAGGAATAGGGTGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PALQVAGEQVAT*CLLWVRNRVRW Trigger: CCAACGCACCCTATTCCTTACCCAAAGAAGACACCAAGTGGCCACCTGCTCTCCAGCCACCTGTAGGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164922.3 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CGTATAGAAACGCTGCTTGTCACTGGGGATGTCCTCTaGGCTAGGGAAGCGCACTTGCTCCAGGGTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: RIETLLVTGDVL*AREAHLLQGHR Trigger: CCTGTGACCCTGGAGCAAGTGCGCTTCCCTAGCCCAGAGGACATCCCCAGTGACAAGCAGCGTTTCTATACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | CTCCCAGAACGTAATCATCAGTGGGTTGGCTCTCTGTaGGAGCAGGGCCGTTGGAGCAGACCTCGTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LPERNHQWVGSL*EQGRWSRPRRS Trigger: AGATCTACGAGGTCTGCTCCAACGGCCCTGCTCCCACAGAGAGCCAACCCACTGATGATTACGTTCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | GTTGGAGCAGACCTCGTAGATCTTGTACGGCTGAGGTaGCATGTCCCGAGGGCCATCATAGAACAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VGADLVDLVRLR*HVPRAIIEQLE Trigger: TTCCAGCTGTTCTATGATGGCCCTCGGGACATGCCACCTCAGCCGTACAAGATCTACGAGGTCTGCTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164922.3 ENSMUST00000167252.5 |
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| CDS CCA 72 bp | TGGTGTTGTCCCCATCCTGGCTGGGACCATGCCTCGTaGCATGGCGCCAGGGTATATAGAAGAGTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: WCCPHPGWDHAS*HGARVYRRVSF Trigger: AAAAGAAACTCTTCTATATACCCTGGCGCCATGCCACGAGGCATGGTCCCAGCCAGGATGGGGACAACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000164626.8 ENSMUST00000164922.3 ENSMUST00000167252.5 |
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| CDS GCA 72 bp | TCTACCATGTGGTCTTTGAGATCCGGGTTTGAGATCTaGAGTCGGATGCTGTCTGCCGACCAAGAAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: STMWSLRSGFEI*SRMLSADQESS Trigger: GGAGCTTTCTTGGTCGGCAGACAGCATCCGACTGCAGATCTCAAACCCGGATCTCAAAGACCACATGGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 |
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| CDS CCA 72 bp | TGGAACTTGATCTCTAGGTCCGTCAAAGGCAACATGTaGGGGCTGATCAGCAGGTCAGGCAAGAGTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: WNLISRSVKGNM*GLISRSGKSGS Trigger: AGAACCACTCTTGCCTGACCTGCTGATCAGCCCCCACATGTTGCCTTTGACGGACCTAGAGATCAAGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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| CDS GCA 72 bp | TCTTTCATGTGGTCTTTGAGATCCGGGTTTGAGATCTaGAGTCGGATGCTGTCTGCCGACCAAGAAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFMWSLRSGFEI*SRMLSADQESS Trigger: GGAGCTTTCTTGGTCGGCAGACAGCATCCGACTGCAGATCTCAAACCCGGATCTCAAAGACCACATGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167252.5 |
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| CDS TCA 72 bp | GTGAACTTCTTTCATGTGGTCTTTGAGATCCGGGTTTaGGATCTGCAGTCGGATGCTGTCTGCCGACCAAGA | + |
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Preference number: 6 (lower is better) Translates to: VNFFHVVFEIRV*DLQSDAVCRPR Trigger: TCTTGGTCGGCAGACAGCATCCGACTGCAGATCTCAAACCCGGATCTCAAAGACCACATGAAAGAAGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167252.5 |
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| CDS CCA 72 bp | TTCTTCTCCAAAGCAAAAGAAGATCTCAAAAGGTGGTaGGGTATTAGTCTGGCCCTTCTGGAACAGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: FFSKAKEDLKRW*GISLALLEQDE Trigger: CTCATCCTGTTCCAGAAGGGCCAGACTAATACCCCACCACCTTTTGAGATCTTCTTTTGCTTTGGAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004392.12 ENSMUST00000163511.7 ENSMUST00000167252.5 |
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