Pregenerated sensors for IRF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003184Ensembl transcript IDs: ENSMUST00000003284.16, ENSMUST00000107834.2, ENSMUST00000207128.2, ENSMUST00000207129.2, ENSMUST00000207521.2, ENSMUST00000208958.2, ENSMUST00000209066.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTTGTCCCTGTaGCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGATGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: ILSPRPWQPCCVLSL*LPPGAPRPQLQMGR Trigger: TCTTCCCATCTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR TCA 90 bp | CAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCTTTGTaGTACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QCVCSSGPVLSLLSL*YFLHDLGSHAVFCP Trigger: GGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATCACAAAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR CAA 90 bp | TTAGGAATGTGGGGATATGGGGGTAACAGGAGGCAGGGTCCAGCCTaGAGCATCACCCGAGTGGCCTCTGGTATCAGTAGCACTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LGMWGYGGNRRQGPA*SITRVASGISSTVG Trigger: CCCCACAGTGCTACTGATACCAGAGGCCACTCGGGTGATGCTCAAGGCTGGACCCTGCCTCCTGTTACCCCCATATCCCCACATTCCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR CAA 90 bp | TTCTTTGTGATACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTaGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FFVILSPRPWQPCCV*SLCLPPGAPRPQLQ Trigger: CTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATCACAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR GCA 72 bp | GAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTaGCAACCATCACCACCTGTGACAGTGTCCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: ESARPPHSKLAG*QPSPPVTVSLA Trigger: AGCAAGGGACACTGTCACAGGTGGTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR GCA 72 bp | CCACGACCTTGGCAGCCATGCTGTGTTTTGTCCCTGTaGCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PRPWQPCCVLSL*LPPGAPRPQLQ Trigger: CTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR-3UTR CAA 90 bp | CCCGAGTGGCCTCTGGTATCAGTAGCACTGTGGGGCTGCAGTGACTCAGTCCGTCAGCCATGCTGTGTTTaGTCCCTGTGCCTCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PEWPLVSVALWGCSDSVRQPCCV*SLCLPP Trigger: AGGAGGGAGGCACAGGGACAAAACACAGCATGGCTG...ACGGACTGAGTCACTGCAGCCCCACAGTGCTACTGATACCAGAGGCCACTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR CCA 72 bp | GGGAACCATGATGGTGTCACACCAGACTTAGGAATGTaGGGATATGGGGGTAACAGGAGGCAGGGTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GNHDGVTPDLGM*GYGGNRRQGPA Trigger: GGCTGGACCCTGCCTCCTGTTACCCCCATATCCCCACATTCCTAAGTCTGGTGTGACACCATCATGGTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR GCA 72 bp | TTCTTTGTGATACTTTCTCCACGACCTTGGCAGCCATaGTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FFVILSPRPWQP*CVLSLCLPPGA Trigger: TGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATCACAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR TCA 72 bp | TGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCTTTGTaGTACTTTCTCCACGACCTTGGCAGCCATGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: CSSGPVLSLLSL*YFLHDLGSHAV Trigger: CACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATCACAAAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR CCA 72 bp | CCCTTGCTCCACGTAGGGACAATGTGTGTGCAGCTCTaGACCTGTCTTGTCCTTGCTTTCTTTGTGATACTT | + |
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Preference number: 3 (lower is better) Translates to: PLLHVGTMCVQL*TCLVLAFFVIL Trigger: AAGTATCACAAAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAGCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR GCA 72 bp | GACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTaGTTTCTTTGTGATACTTTCTCCACGACCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DNVCAALDLSCP*FLCDTFSTTLA Trigger: TGCCAAGGTCGTGGAGAAAGTATCACAAAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | TCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCAGGATCGGGCAGGGTaGCTGGCTGCCAGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SVVVSQPARPTASLPVANQDRAG*LAARAV Trigger: CACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTG...GTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | TCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCCCAGCCTGCCACAGTaGCAGCCCATTGCCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SVVVSQPARPTASLPVANPSLPQ*QPIAQP Trigger: GGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGGG...GTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCACCTGTCCCTCGCCCACTGTCTaGAAGCAGCTCCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSPPAPQQACRLPTITTCPSPTV*KQLLPQ Trigger: CTGGGGGAGGAGCTGCTTCCAGACAGTGGGCGAGGG...ACAGGTGGTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | GTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCCCCAGGTCCAGCTGTaGCACCAGCCAGGGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: VVSQPARPTASLPVANHHPQVQL*HQPGQN Trigger: ATTTTGCCCTGGCTGGTGTCACAGCTGGACCTGGGG...GTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | GTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCATTGCCCAGCCCTTTaGGCACCTGCCCCACGTACT | + |
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Preference number: 4 (lower is better) Translates to: VVSQPARPTASLPVANHHHCPAL*APAPRT Trigger: AGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATG...GTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | GTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCCATCACAAGCCTCTTaGCCCATGGCTGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVSQPARPTASLPVANHHPSQAS*PMAGPG Trigger: CCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGG...GTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | TCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACAGGTTTTCCTGGGAGTaGGGCAGGCTGCTTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SVVVSQPARPTASLPVANRFSWE*GRLLLP Trigger: TGGCAAAAGCAGCCTGCCTCACTCCCAGGAAAACCT...GTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | TGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCCGGGCCACAGGATCGGGCAGGGTaGCTGGCTGCCAGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WRCASPRFSVKRLPLPGPQDRAG*LAARAV Trigger: CACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTG...TGGCCCGGGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207129.2 ENSMUST00000208958.2 |
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| CDS-3UTR GCA 90 bp | CTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGATGGGAAGACTGAGCGCCACGCCTTCCAGCTaGCCCAGGTCCAGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LCLPPGAPRPQLQMGRLSATPSS*PRSSCD Trigger: GTCACAGCTGGACCTGGGGCAGCTGGAAGGCGTGGC...GCTCAGTCTTCCCATCTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | GAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCACCTCCCAGGCCTGGAAGATaGCAAAGTCAGCCATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESARPPHSKLAGCQPSPPPRPGR*QSQPSV Trigger: CACAGATGGCTGACTTTGGCATCTTCCAGGCCTGGG...AGGTGGTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | ACTCAGTCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGAGGCAGGCTGCTTTTaGCATTGGTGTCAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TQSVVVSQPARPTASLPVEAGCF*HWCQER Trigger: CCTCTCCTGACACCAATGGCAAAAGCAGCCTGCCTC...AACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGACTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | GGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCCCCCAGCCTGCCACAGTaGCAGCCCATTGCCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GCWRCASPRFSVKRLPLPPSLPQ*QPIAQP Trigger: GGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGGG...GGGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCAGGATCGGGCAGGGTaGCTGGCTGCCAGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGCWRCASPRFSVKRLPLQDRAG*LAARAV Trigger: CACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTG...AAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207129.2 ENSMUST00000208958.2 |
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| CDS-3UTR GCA 90 bp | TGGCCTCTGGTATCAGTAGCACTGTGGGGCTGCAGTGACTCAGTCCGTGGTGGTGGCACCACTGGCTTCTaGCCAGGCCTGGAAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: WPLVSVALWGCSDSVRGGGTTGF*PGLEDA Trigger: GGCATCTTCCAGGCCTGGGCAGAAGCCAGTGGTGCC...ACCACCACGGACTGAGTCACTGCAGCCCCACAGTGCTACTGATACCAGAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | GTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACGCCACATTTCCCCCATaGAGAACCACAGAGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VVSQPARPTASLPVANHHATFPP*RTTECS Trigger: GCTACACTCTGTGGTTCTGCATGGGGGAAATGTGGC...GTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | CCTGGAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGCCCTCGCCCACTGTCTaGAAGCAGCTCCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGSPCPPPSPGGRPCTGQPSPTV*KQLLPQ Trigger: CTGGGGGAGGAGCTGCTTCCAGACAGTGGGCGAGGG...CTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGATGGGAAGACTGAGCACCCATGGCTGGTCCTaGGGCCACATTTCCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LCLPPGAPRPQLQMGRLSTHGWS*GHISPM Trigger: CATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGT...GCTCAGTCTTCCCATCTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR TCA 90 bp | CAGTCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCGGGCTTGGCAGTTGTTaGGAAGGATCAGAAACAATA | + |
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Preference number: 4 (lower is better) Translates to: QSVVVSQPARPTASLPVAGLGSC*EGSETI Trigger: TATTGTTTCTGATCCTTCTCAACAACTGCCAAGCCC...GGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | TGGCCTCTGGTATCAGTAGCACTGTGGGGCTGCAGTGACTCAGTCCGTGGTGGTGGCAGGGTGACTGGCTaGCAGGGCAGTGTCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: WPLVSVALWGCSDSVRGGGRVTG*QGSVMS Trigger: TGACATGACACTGCCCTGGCAGCCAGTCACCCTGCC...ACCACCACGGACTGAGTCACTGCAGCCCCACAGTGCTACTGATACCAGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | CCATGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGATCGGGCAGGGTGACTaGCTGCCAGGGCAGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PCCVLSLCLPPGAPRPQLIGQGD*LPGQCH Trigger: ATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGAT...CAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| 3UTR CAA 72 bp | TGGGGATATGGGGGTAACAGGAGGCAGGGTCCAGCCTaGAGCATCACCCGAGTGGCCTCTGGTATCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: WGYGGNRRQGPA*SITRVASGISS Trigger: GCTACTGATACCAGAGGCCACTCGGGTGATGCTCAAGGCTGGACCCTGCCTCCTGTTACCCCCATATCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | CCATGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGTCCTGCCGTAGGCCATaGTTCCACGGGATCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PCCVLSLCLPPGAPRPQLSCRRP*FHGILN Trigger: GTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGA...CAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR GCA 90 bp | TGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCCGGGCCATCTCTAGGCAGGGTGACTGGCTaGCAGGGCAGTGTCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: CASPRFSVKRLPLPGPSLGRVTG*QGSVMS Trigger: TGACATGACACTGCCCTGGCAGCCAGTCACCCTGCC...TAGAGATGGCCCGGGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR GCA 90 bp | GAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGAGGTAGGCACTGCCCAGCCTaGCACAGTGCCAGCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: EVHVLHQVLEVGLVLVRGRHCPA*HSASPL Trigger: CAATGGGCTGGCACTGTGGCAGGCTGGGCAGTGCCT...ACCTCTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCACCTGTGTTCACATTGGGGCTTaGCAGTTGTTGAGAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: VSPPAPQQACRLPTITTCVHIGA*QLLRRI Trigger: GATCCTTCTCAACAACTGCCAAGCCCCAATGTGAAC...ACAGGTGGTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACCATCACCACCTGTGGAAGTTGTTCACATTaGGGCTTGGCAGTTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSPPAPQQACRLPTITTCGSCSH*GLAVVE Trigger: CTCAACAACTGCCAAGCCCCAATGTGAACAACTTCC...ACAGGTGGTGATGGTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | CCATGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAAAAGAGTGTCTGCTaGAAGACCTGGCGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PCCVLSLCLPPGAPRPQLQKSVC*KTWRPR Trigger: CCGAGGCCGCCAGGTCTTCCAGCAGACACTCTTTTG...CAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | TGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCCGGGCCACTCTTGACCCATGGCTaGTCCTGGGGCCACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: WRCASPRFSVKRLPLPGPLLTHG*SWGHIS Trigger: GGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAG...TGGCCCGGGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGAGGTCATTGCCCAGCCCTTTaGGCACCTGCCCCACGTACT | + |
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Preference number: 4 (lower is better) Translates to: EVHVLHQVLEVGLVLVRGHCPAL*APAPRT Trigger: AGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATG...ACCTCTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGACCATCACAAGCCTCTTaGCCCATGGCTGGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LEVHVLHQVLEVGLVLVRPSQAS*PMAGPG Trigger: CCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGG...TCTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
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| CDS-3UTR GCA 90 bp | CTCCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCAGGCACTGCCCAGCCTaGCACAGTGCCAGCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: LHVGTMCVQLWTCLVLAFRHCPA*HSASPL Trigger: CAATGGGCTGGCACTGTGGCAGGCTGGGCAGTGCCT...GAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | GCTCCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTGGGTGTAGGCACCACTaGCTTCTGCCCAGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: APRRDNVCAALDLSCPCFGCRHH*LLPRPG Trigger: TCCAGGCCTGGGCAGAAGCCAGTGGTGCCTACACCC...AAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
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| CDS-3UTR CCA 90 bp | TGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCATCGGGCAGGGTGACTaGCTGCCAGGGCAGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: WLLEMCKSTVFSEEAPPSIGQGD*LPGQCH Trigger: ATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGAT...GGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCATCGGGCAGGGTGACTaGCTGCCAGGGCAGTGTCNN | + |
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Preference number: 4 (lower is better) Translates to: WLLEMCKSTVFSEEAPPSIGQGD*LPGQCX Trigger: NNGACACTGCCCTGGCAGCCAGTCACCCTGCCCGAT...GGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGTTTCCGGTTCAGGGCTaGCCGGAAATTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCVLSLCLPPGAPRPQLQFPVQG*PEIPLP Trigger: TGGAAGAGGAATTTCCGGTCAGCCCTGAACCGGAAA...CTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR GCA 90 bp | CCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCTTGTGTCATGTCAGCTGTaGTGCCCACCAGCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRRDNVCAALDLSCPCFLVSCQL*CPPAAG Trigger: GCCTGCGGCTGGTGGGCAGCACAGCTGACATGACAC...AAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGAGCCCTTTGAGCACCTaGCCCACGTACTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGSPCPPPSPGGRPCTGQSPLST*PTYSFT Trigger: TGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCT...CTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
||
| CDS-3UTR CCA 90 bp | GATACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTTGTCCCTGTGCCTCCCCCGTCCTTGTCCTTGTaGACCTCTCCATCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFSTTLAAMLCFVPVPPPSLSL*TSPSGP Trigger: AGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGG...GGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGGCCACATTTCCCCCATaGAGAACCACAGAGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSPCPPPSPGGRPCTGQATFPP*RTTECS Trigger: GCTACACTCTGTGGTTCTGCATGGGGGAAATGTGGC...CTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGGGAGATAGGCTGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTACCCATGGCTGGTCCTaGGGCCACATTTCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EVREIGWLLEMCKSTVFSTHGWS*GHISPM Trigger: CATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGT...ACTGAAAACCGTGGACTTGCACATCTCCAACAGCCAGCCTATCTCCCTTACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCCTCTTGACCCATGGCTaGTCCTGGGGCCACATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHVGTMCVQLWTCLVLAFLLTHG*SWGHIS Trigger: GGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAG...GAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| 3UTR CAA 72 bp | ATACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTaGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPRPWQPCCV*SLCLPPGAPRP Trigger: AGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGTCCTCAGCTAGCAGCTaGTTCAGTGGATTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCVLSLCLPPGAPRPQLQSSASS*FSGFSW Trigger: CCAAGAAAATCCACTGAAGCAGCTGCTAGCTGAGGA...CTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR GCA 90 bp | GCTCCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTAGCCCTTTGAGCACCTaGCCCACGTACTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: APRRDNVCAALDLSCPCFSPLST*PTYSFT Trigger: TGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCT...AAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR TCA 90 bp | GATACTTTCTCCACGACCTTGGCAGCCATGCTGTGTTTTGTCCCTGTGCCTCCCATTCCTCTTCCAGGTTaGCACGTCCGGCTTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTFSTTLAAMLCFVPVPPIPLPG*HVRLIL Trigger: AAGGATAAGCCGGACGTGTCAACCTGGAAGAGGAAT...GGGAGGCACAGGGACAAAACACAGCATGGCTGCCAAGGTCGTGGAGAAAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS-3UTR CCA 90 bp | TTATTGGTAGCAGCTGAGTGGGGCTCAGATATTTCCAGTGGCCTGGAAGTCCATCCGTCCTTGTCCTTGTaGACCTCTCCATCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAAEWGSDISSGLEVHPSLSL*TSPSGP Trigger: AGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGG...ATGGACTTCCAGGCCACTGGAAATATCTGAGCCCCACTCAGCTGCTACCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTCCTTGCTTTCTTTGTGATACTTTCTCCACGACCTTGGCAGCCATGCTGGGCTGCTTTTGCCATTaGTGTCAGGAGAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPCFLCDTFSTTLAAMLGCFCH*CQERHP Trigger: TGGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCC...CAGCATGGCTGCCAAGGTCGTGGAGAAAGTATCACAAAGAAAGCAAGGACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| 3UTR CAA 72 bp | TTGTACTGGTCAGAGGTAAGGGAGATAGGCTGGCTGTaGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYWSEVREIGWL*EMCKSTVFSEE Trigger: CTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCAGCCTATCTCCCTTACCTCTGACCAGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207129.2 ENSMUST00000208958.2 |
||
| CDS GCA 90 bp | GCCCAGAAGGCGTGGGAGTGGCCTAGGCGCTGGGCCCAGAGGCACTaGCCAGCCTGCCACAGTGCCAGCCCATTGCCCAGCCCTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQKAWEWPRRWAQRH*PACHSASPLPSPLS Trigger: GCTCAAAGGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGGGCAGTGCCTCTGGGCCCAGCGCCTAGGCCACTCCCACGCCTTCTGGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
||
| CDS GCA 90 bp | CTGAACCTCGTTCGGCTCTCGTCCAGCCAGGCCACGCCTTCCAGCTaGCCCAGGTCCAGCTGTGACACCAGCCAGGGCAAAATCCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNLVRLSSSQATPSS*PRSSCDTSQGKIRG Trigger: ACCGCGGATTTTGCCCTGGCTGGTGTCACAGCTGGACCTGGGGCAGCTGGAAGGCGTGGCCTGGCTGGACGAGAGCCGAACGAGGTTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS TCA 90 bp | CAGCCATCTGTGCGTCCTGCCGTAGGCCATGCTTCCACGGGATCCTaGACCTCGTTCGGCTCTCGTCCAGCCAGGCCACGCCTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSVRPAVGHASTGS*TSFGSRPARPRLPA Trigger: AGCTGGAAGGCGTGGCCTGGCTGGACGAGAGCCGAACGAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCACAGATGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS GCA 90 bp | AGCTTGTCCGTCAGAAACCCCTCAGGATCGGGCAGGGTGACTGGCTaGCAGGGCAGTGTCATGTCAGCTGTGCTGCCCACCAGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSVRNPSGSGRVTG*QGSVMSAVLPTSRR Trigger: CCTGCGGCTGGTGGGCAGCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGACAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
||
| CDS CCA 90 bp | GCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTTGTaGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGAAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATKGLRSNTAPSLSL*TSPSGPRPLSGSSS Trigger: GGAGCTGCTTCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | TCCGTGGTGGTGAGTCAGCCCGCCCGCCCCACAGCAAGCTTGCCGGTTGCCAACAGGCTGCTTTTGCCATaGGTGTCAGGAGAGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVVVSQPARPTASLPVANRLLLP*VSGEAP Trigger: GGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCCT...GTTGGCAACCGGCAAGCTTGCTGTGGGGCGGGCGGGCTGACTCACCACCACGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS TCA 90 bp | GGCACTGCCCAGCCTGCCACAGTGCCAGCCCATTGCCCAGCCCTTTaGGCACCTGCCCCACGTACTCCTTCACAAGCTTGTCCGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GTAQPATVPAHCPAL*APAPRTPSQACPSE Trigger: TTCTGACGGACAAGCTTGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGGGCAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
||
| CDS TCA 90 bp | CCTTCACAAGCTTGTCCGTCAGAAACCCCTCAGGATCGGGCAGGGTaGCTGGCTGCCAGGGCAGTGTCATGTCAGCTGTGCTGCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PSQACPSETPQDRAG*LAARAVSCQLCCPP Trigger: TGGTGGGCAGCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGACAAGCTTGTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
||
| CDS GCA 90 bp | TCTGCCCAGGCCTGGAAGATGCCAAAGTCAGCCATCTGTGCGTCCTaGCGTAGGCCATGCTTCCACGGGATCCTGAACCTCGTTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAQAWKMPKSAICAS*RRPCFHGILNLVRL Trigger: GAGCCGAACGAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCACAGATGGCTGACTTTGGCATCTTCCAGGCCTGGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCACAGTGCCAGCCCATaGCCCAGCCCTTTGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PCCVLSLCLPPGAPRPQLHSASP*PSPLST Trigger: GGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTG...CAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS GCA 90 bp | TGGAAGATGCCAAAGTCAGCCATCTGTGCGTCCTGCCGTAGGCCATaGTTCCACGGGATCCTGAACCTCGTTCGGCTCTCGTCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKMPKSAICASCRRP*FHGILNLVRLSSSQ Trigger: CTGGCTGGACGAGAGCCGAACGAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCACAGATGGCTGACTTTGGCATCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCATTGCCCAGCCCTTaGAGCACCTGCCCCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AGCWRCASPRFSVKRLPLPLPSP*STCPTY Trigger: GTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGG...AAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGTTTTGTCCCTGTGCCTCCCTCCTGGAGCACCTAGACCTCAGCTGCAGACCATCACAAGCCTCTaGACCCATGGCTGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCVLSLCLPPGAPRPQLQTITSL*THGWSW Trigger: CCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGT...CTGCAGCTGAGGTCTAGGTGCTCCAGGAGGGAGGCACAGGGACAAAACACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS GCA 90 bp | GTAGCGTGGGGAGTGTCCACTTCCTTCCATGAAGGCAATCAGATCTaGCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAWGVSTSFHEGNQI*HEGPEVEHGSVLVL Trigger: AAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGCAGATCTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCCATTGCCCAGCCCTTaGAGCACCTGCCCCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: APRRDNVCAALDLSCPCFPLPSP*STCPTY Trigger: GTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGG...AAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS CCA 90 bp | GTCCTGGGGCCACATTTCCCCCATGCAGAACCACAGAGTGTAGCGTaGGGAGTGTCCACTTCCTTCCATGAAGGCAATCAGATCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGPHFPHAEPQSVA*GVSTSFHEGNQICH Trigger: GTGGCAGATCTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTACACTCTGTGGTTCTGCATGGGGGAAATGTGGCCCCAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTTGGAGATGTGCAAGTCCACGGTTTTCAGTGAAGAGGCTCCCCCTTCCACCATCACAAGCCTCTaGACCCATGGCTGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLLEMCKSTVFSEEAPPSTITSL*THGWSW Trigger: CCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGT...GGAAGGGGGAGCCTCTTCACTGAAAACCGTGGACTTGCACATCTCCAACAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
||
| CDS CCA 90 bp | GTCCTGGGGCCACATTTCCCCCATGCAGAACCACAGAGTGTAGCGTaGGGAGTGTCCACTTCCTTCCATGAAGGCAATCAGATGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGPHFPHAEPQSVA*GVSTSFHEGNQMFL Trigger: GAGGAACATCTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTACACTCTGTGGTTCTGCATGGGGGAAATGTGGCCCCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207128.2 |
||
| CDS GCA 90 bp | CAAATAACTTCGGTAGGTTTTCCTGGGAGTGAGGCAGGCTGCTTTTaGCATTGGTGTCAGGAGAGGCACCCAGATGTACGAAGTCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QITSVGFPGSEAGCF*HWCQERHPDVRSPA Trigger: CGCGGGACTTCGTACATCTGGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCCTGCCTCACTCCCAGGAAAACCTACCGAAGTTATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS CCA 90 bp | GTCCTGGGGCCACATTTCCCCCATGCAGAACCACAGAGTGTAGCGTaGGGAGTGTCCACTTCCTTCCATGAAGGCAATCAGATTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLGPHFPHAEPQSVA*GVSTSFHEGNQIPS Trigger: TGAAGGAATCTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTACACTCTGTGGTTCTGCATGGGGGAAATGTGGCCCCAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCTGGTATCAGTAGCACTGTGGGGCTGCAGTGACTCAGTCCGTGGTGGTCATGTAGGAACAACCTaGACCATCACAAGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WPLVSVALWGCSDSVRGGHVGTT*TITSLL Trigger: CAAGAGGCTTGTGATGGTCAAGGTTGTTCCTACATG...ACCACCACGGACTGAGTCACTGCAGCCCCACAGTGCTACTGATACCAGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS CCA 90 bp | AAGACATGTAGGAACAACCTTGACCATCACAAGCCTCTTGACCCATaGCTGGTCCTGGGGCCACATTTCCCCCATGCAGAACCACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTCRNNLDHHKPLDP*LVLGPHFPHAEPQS Trigger: ACTCTGTGGTTCTGCATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGTCAAGGTTGTTCCTACATGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000208958.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAGTCCATGTCCTCCACCAAGTCCTGGAGGTAGGCCTTGTACTGGTCAGCATGTAGGAACAACCTaGACCATCACAAGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGSPCPPPSPGGRPCTGQHVGTT*TITSLL Trigger: CAAGAGGCTTGTGATGGTCAAGGTTGTTCCTACATG...CTGACCAGTACAAGGCCTACCTCCAGGACTTGGTGGAGGACATGGACTTCCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
||
| CDS GCA 90 bp | GGCCATCAAATAACTTCGGTAGGTTTTCCTGGGAGTGAGGCAGGCTaGTTTTGCCATTGGTGTCAGGAGAGGCACCCAGATGTACGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHQITSVGFPGSEAG*FCHWCQERHPDVRS Trigger: ACTTCGTACATCTGGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCCTGCCTCACTCCCAGGAAAACCTACCGAAGTTATTTGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS CCA 90 bp | ATTGGTGTCAGGAGAGGCACCCAGATGTACGAAGTCCCGCGCCCCTaGAGTCACAAACTCATACACTTTATGAGGGTCATAAGGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IGVRRGTQMYEVPRP*SHKLIHFMRVIRVL Trigger: AAGGACCCTTATGACCCTCATAAAGTGTATGAGTTTGTGACTCCAGGGGCGCGGGACTTCGTACATCTGGGTGCCTCTCCTGACACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS-3UTR CAA 90 bp | CCACGTAGGGACAATGTGTGTGCAGCTCTGGACCTGTCTTGTCCTTGCTTTCTTAATTCCTCTTCCAGGTaGACACGTCCGGCTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRDNVCAALDLSCPCFLNSSSR*TRPAYP Trigger: AGGATAAGCCGGACGTGTCAACCTGGAAGAGGAATT...AAGAAAGCAAGGACAAGACAGGTCCAGAGCTGCACACACATTGTCCCTACGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003284.16 |
||
| CDS TCA 90 bp | GGTGCAGGGTTTAGGAAGTTGTTCACATTGGGGCTTGGCAGTTGTTaGGAAGGATCAGAAACAATAGCCAGATCTGAGGACCCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGFRKLFTLGLGSC*EGSETIARSEDPSS Trigger: AGATGAGGGGTCCTCAGATCTGGCTATTGTTTCTGATCCTTCTCAACAACTGCCAAGCCCCAATGTGAACAACTTCCTAAACCCTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000209066.2 |
||
| CDS CCA 72 bp | CCCAGAGCCCAGAAGGCGTGGGAGTGGCCTAGGCGCTaGGCCCAGAGGCACTGCCCAGCCTGCCACAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRAQKAWEWPRR*AQRHCPACHSA Trigger: GGCACTGTGGCAGGCTGGGCAGTGCCTCTGGGCCCAGCGCCTAGGCCACTCCCACGCCTTCTGGGCTCTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
||
| CDS TCA 72 bp | GTGCGTCCTGCCGTAGGCCATGCTTCCACGGGATCCTaGACCTCGTTCGGCTCTCGTCCAGCCAGGCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: VRPAVGHASTGS*TSFGSRPARPR Trigger: GCGTGGCCTGGCTGGACGAGAGCCGAACGAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
||
| CDS CAA 72 bp | GCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTaGTCCTTGTGGACCTCTCCATCAGGCCCTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATKGLRSNTAPS*SLWTSPSGPRP Trigger: TGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | CCTGCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTaGTGGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PATKGLRSNTAPSLS*WTSPSGPRPLSGSS Trigger: GCTGCTTCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS GCA 72 bp | GTCAGAAACCCCTCAGGATCGGGCAGGGTGACTGGCTaGCAGGGCAGTGTCATGTCAGCTGTGCTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VRNPSGSGRVTG*QGSVMSAVLPT Trigger: GGTGGGCAGCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | GTCCGTCAGAAACCCCTCAGGATCGGGCAGGGTGACTaGCTGCCAGGGCAGTGTCATGTCAGCTGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VRQKPLRIGQGD*LPGQCHVSCAA Trigger: GGCAGCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | GGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTTGTaGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLRSNTAPSLSL*TSPSGPRPLSG Trigger: TCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | TCTGCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTaGTGGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SATKGLRSNTAPSLS*WTSPSGPRPLSGSS Trigger: GCTGCTTCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | AGGCACTGCCCAGCCTGCCACAGTGCCAGCCCATTGCCCAGCCCTTaGAGCACCTGCCCCACGTACTCCTTCACAAGCTTGTCCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RHCPACHSASPLPSP*STCPTYSFTSLSVR Trigger: TCTGACGGACAAGCTTGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGGGCAGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | GAACAACCTGCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTaGTCCTTGTGGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EQPATKGLRSNTAPS*SLWTSPSGPRPLSG Trigger: TCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGCAGGTTGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS TCA 72 bp | GCTTGTCCGTCAGAAACCCCTCAGGATCGGGCAGGGTaGCTGGCTGCCAGGGCAGTGTCATGTCAGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ACPSETPQDRAG*LAARAVSCQLC Trigger: GCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGACAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 72 bp | CCAGCCTGCCACAGTGCCAGCCCATTGCCCAGCCCTTaGAGCACCTGCCCCACGTACTCCTTCACAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: PACHSASPLPSP*STCPTYSFTSL Trigger: CAAGCTTGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 72 bp | AAGGGCCTGAGGTCGAACACGGCTCCGTCCTTGTCCTaGTGGACCTCTCCATCAGGCCCTCGCCCACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: KGLRSNTAPSLS*WTSPSGPRPLS Trigger: AGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | ATCAGATCTGCCACGAAGGGCCTGAGGTCGAACACGGCTCCGTCCTaGTCCTTGTGGACCTCTCCATCAGGCCCTCGCCCACTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IRSATKGLRSNTAPS*SLWTSPSGPRPLSG Trigger: TCCAGACAGTGGGCGAGGGCCTGATGGAGAGGTCCACAAGGACAAGGACGGAGCCGTGTTCGACCTCAGGCCCTTCGTGGCAGATCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000209066.2 |
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| CDS TCA 72 bp | CAGCCTGCCACAGTGCCAGCCCATTGCCCAGCCCTTTaGGCACCTGCCCCACGTACTCCTTCACAAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: QPATVPAHCPAL*APAPRTPSQAC Trigger: ACAAGCTTGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTGGCAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS GCA 72 bp | CCAAAGTCAGCCATCTGTGCGTCCTGCCGTAGGCCATaGTTCCACGGGATCCTGAACCTCGTTCGGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PKSAICASCRRP*FHGILNLVRLS Trigger: CGAGAGCCGAACGAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCACAGATGGCTGACTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | GTCCGTCAGAAACCCCTCAGGATCGGGCAGGGTGACTaGCTGCCAGGGCAGTGTCATGTCAGCTGTGCTGNN | + |
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Preference number: 6 (lower is better) Translates to: VRQKPLRIGQGD*LPGQCHVSCAX Trigger: NNCAGCACAGCTGACATGACACTGCCCTGGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207129.2 |
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| CDS GCA 72 bp | GCCTGGAAGATGCCAAAGTCAGCCATCTGTGCGTCCTaGCGTAGGCCATGCTTCCACGGGATCCTGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: AWKMPKSAICAS*RRPCFHGILNL Trigger: GAGGTTCAGGATCCCGTGGAAGCATGGCCTACGGCAGGACGCACAGATGGCTGACTTTGGCATCTTCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS GCA 72 bp | CACAGTGCCAGCCCATTGCCCAGCCCTTTGAGCACCTaGCCCACGTACTCCTTCACAAGCTTGTCCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSASPLPSPLST*PTYSFTSLSVR Trigger: TCTGACGGACAAGCTTGTGAAGGAGTACGTGGGGCAGGTGCTCAAAGGGCTGGGCAATGGGCTGGCACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207129.2 ENSMUST00000209066.2 |
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| CDS CAA 72 bp | TCCGGTTCAGGGCTGACCGGAAATTCCTCTTCCAGGTaGACACGTCCGGCTTATCCTTCCCCGGGGTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SGSGLTGNSSSR*TRPAYPSPGCR Trigger: CCTACACCCCGGGGAAGGATAAGCCGGACGTGTCAACCTGGAAGAGGAATTTCCGGTCAGCCCTGAACCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | ACACTTCTTTCCGGTTCAGGGCTGACCGGAAATTCCTCTTCCAGGTaGACACGTCCGGCTTATCCTTCCCCGGGGTGTAGGCACCACTGG | + |
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Preference number: 6 (lower is better) Translates to: TLLSGSGLTGNSSSR*TRPAYPSPGCRHHW Trigger: CCAGTGGTGCCTACACCCCGGGGAAGGATAAGCCGGACGTGTCAACCTGGAAGAGGAATTTCCGGTCAGCCCTGAACCGGAAAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | TTGACCATCACAAGCCTCTTGACCCATGGCTGGTCCTaGGGCCACATTTCCCCCATGCAGAACCACAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LTITSLLTHGWS*GHISPMQNHRV Trigger: CACTCTGTGGTTCTGCATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000208958.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | ACAACCTTGACCATCACAAGCCTCTTGACCCATGGCTaGTCCTGGGGCCACATTTCCCCCATGCAGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: TTLTITSLLTHG*SWGHISPMQNH Trigger: GTGGTTCTGCATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGTCAAGGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000208958.2 ENSMUST00000209066.2 |
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| CDS CAA 90 bp | TCCCGGGCCATCTCTAACAGCTCCTTAAGACATGTAGGAACAACCTaGACCATCACAAGCCTCTTGACCCATGGCTGGTCCTGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SRAISNSSLRHVGTT*TITSLLTHGWSWGH Trigger: GTGGCCCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGTCAAGGTTGTTCCTACATGTCTTAAGGAGCTGTTAGAGATGGCCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000209066.2 |
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| CDS GCA 72 bp | TCGGTAGGTTTTCCTGGGAGTGAGGCAGGCTGCTTTTaGCATTGGTGTCAGGAGAGGCACCCAGATGTACGA | + |
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Preference number: 6 (lower is better) Translates to: SVGFPGSEAGCF*HWCQERHPDVR Trigger: TCGTACATCTGGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCCTGCCTCACTCCCAGGAAAACCTACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | AGGAACAACCTTGACCATCACAAGCCTCTTGACCCATaGCTGGTCCTGGGGCCACATTTCCCCCATGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RNNLDHHKPLDP*LVLGPHFPHAE Trigger: TTCTGCATGGGGGAAATGTGGCCCCAGGACCAGCCATGGGTCAAGAGGCTTGTGATGGTCAAGGTTGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000208958.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | CCACATTTCCCCCATGCAGAACCACAGAGTGTAGCGTaGGGAGTGTCCACTTCCTTCCATGAAGGCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: PHFPHAEPQSVA*GVSTSFHEGNQ Trigger: CTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTACACTCTGTGGTTCTGCATGGGGGAAATGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000208958.2 ENSMUST00000209066.2 |
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| CDS GCA 72 bp | ATAACTTCGGTAGGTTTTCCTGGGAGTGAGGCAGGCTaGTTTTGCCATTGGTGTCAGGAGAGGCACCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ITSVGFPGSEAG*FCHWCQERHPD Trigger: ATCTGGGTGCCTCTCCTGACACCAATGGCAAAAGCAGCCTGCCTCACTCCCAGGAAAACCTACCGAAGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | AGGAGAGGCACCCAGATGTACGAAGTCCCGCGCCCCTaGAGTCACAAACTCATACACTTTATGAGGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: RRGTQMYEVPRP*SHKLIHFMRVI Trigger: TATGACCCTCATAAAGTGTATGAGTTTGTGACTCCAGGGGCGCGGGACTTCGTACATCTGGGTGCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207521.2 ENSMUST00000209066.2 |
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| CDS TCA 72 bp | ACAGAGTGTAGCGTGGGGAGTGTCCACTTCCTTCCATaGAGGCAATCAGATTCCTTCACAAGCTTGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: TECSVGSVHFLP*RQSDSFTSLSV Trigger: GACGGACAAGCTTGTGAAGGAATCTGATTGCCTTCATGGAAGGAAGTGGACACTCCCCACGCTACACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208958.2 |
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| CDS CCA 72 bp | TGTTCCTCAGCTAGCAGCTGCTTCAGTGGATTTTCTTaGGGTGCAGGGTTTAGGAAGTTGTTCACATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSSASSCFSGFS*GAGFRKLFTLG Trigger: CCCCAATGTGAACAACTTCCTAAACCCTGCACCCCAAGAAAATCCACTGAAGCAGCTGCTAGCTGAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000209066.2 |
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| CDS CCA 72 bp | TTTCTTGGGGTGCAGGGTTTAGGAAGTTGTTCACATTaGGGCTTGGCAGTTGTTGAGAAGGATCAGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: FLGVQGLGSCSH*GLAVVEKDQKQ Trigger: TTGTTTCTGATCCTTCTCAACAACTGCCAAGCCCCAATGTGAACAACTTCCTAAACCCTGCACCCCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000209066.2 |
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| CDS TCA 72 bp | TTTAGGAAGTTGTTCACATTGGGGCTTGGCAGTTGTTaGGAAGGATCAGAAACAATAGCCAGATCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FRKLFTLGLGSC*EGSETIARSED Trigger: GTCCTCAGATCTGGCTATTGTTTCTGATCCTTCTCAACAACTGCCAAGCCCCAATGTGAACAACTTCCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003284.16 ENSMUST00000107834.2 ENSMUST00000207128.2 ENSMUST00000209066.2 |
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