Pregenerated sensors for IRF2BPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034168Ensembl transcript IDs: ENSMUST00000038422.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTaGCACCAAATAAATGCTAACGAATATGATGCGAAAGACCCAATC | + |
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Preference number: 1 (lower is better) Translates to: QSLLRAINSVPRQTF*HQINANEYDAKDPI Trigger: GATTGGGTCTTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR-3UTR CCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAAAGATTGAAGAGGAGGTaGTCTAGGGCAAAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: VPRQTFCHQINANEYDAKRLKRR*SRAKEV Trigger: GACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCT...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR CAA 90 bp | TTCAGAGTGCATAACATTTACAAAAATACACACCAGCAGCAGTCGTaGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FRVHNIYKNTHQQQS*LRAINSVPRQTFCH Trigger: GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTGGTGTGTATTTTTGTAAATGTTATGCACTCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGGAAGGGCCCTCTAGATaGAAGAGGAGGTGGTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEEGPSR*KRRWSR Trigger: CCTAGACCACCTCCTCTTCAATCTAGAGGGCCCTTC...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCCACCAGCAGCAGTCGTaGCTAAGGGCTATTAATTCT | + |
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Preference number: 3 (lower is better) Translates to: QNKIKYRLQHWGCLERRRHQQQS*LRAINS Trigger: AGAATTAATAGCCCTTAGCAACGACTGCTGCTGGTG...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR GCA 72 bp | CTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTaGCACCAAATAAATGCTAACGAATATGATGCGAAA | + |
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Preference number: 3 (lower is better) Translates to: LRAINSVPRQTF*HQINANEYDAK Trigger: TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR CCA 72 bp | ACAGAACAGAACAAAATTAAGTATAGACTTCAACACTaGGGCTGTTTAGAAAGAAGACGCTTTTTACCATTT | + |
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Preference number: 3 (lower is better) Translates to: TEQNKIKYRLQH*GCLERRRFLPF Trigger: AAATGGTAAAAAGCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTGTTCTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGGATGCCAGGCGACGCTaGCCCGGCACGGAGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRDARRR*PGTEAG Trigger: ACCCGCCTCCGTGCCGGGCCAGCGTCGCCTGGCATC...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGGTGGTCCGATTGGAATaGGGTCCCAGAGGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRVVRLE*GPRGGG Trigger: CCCTCCACCTCTGGGACCTCATTCCAATCGGACCAC...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGCTGACTCCGGCGGGGTaGTCCGATTGGAATGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRLTPAG*SDWNEV Trigger: GACCTCATTCCAATCGGACCACCCCGCCGGAGTCAG...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGTTCAGCGCCTCGCTCTaGTTTGCCATCCACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRFSASL*FAIHCC Trigger: GCAGCAGTGGATGGCAAACCAGAGCGAGGCGCTGAA...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGCCGCTTCAGCTGGCGTaGTGTCTCGATCACGAATTC | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRPLQLA*CLDHEF Trigger: GAATTCGTGATCGAGACAGCACGCCAGCTGAAGCGG...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGAATTCAGGTCCCCATTaGGTGATGCCAGGCGACGCT | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRNSGPH*VMPGDA Trigger: AGCGTCGCCTGGCATCACGCAATGGGGACCTGAATT...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGTTTAGCTCACGCTCCTaGTCCGTGCTCGACACCGAT | + |
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Preference number: 4 (lower is better) Translates to: PSRLKRRWSRAKEVAALRFSSRS*SVLDTD Trigger: ATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAA...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCGGGGGCACGGTTAGCTaGGGTCCCCCGCCACCACCC | + |
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Preference number: 4 (lower is better) Translates to: QQQSLLRAINSVPRQTFCGGTVS*GPPPPP Trigger: GGGTGGTGGCGGGGGACCTCAGCTAACCGTGCCCCC...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACGCCGGGCGGCGTGGCTaGTGCTCCCCAGACTCACCG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHAGRRG*CSPDSP Trigger: CGGTGAGTCTGGGGAGCAGCAGCCACGCCGCCCGGC...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACGGGGACGGACCGTTCTaGGGGGCTGACTCCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHGDGPF*GADSGG Trigger: CCCGCCGGAGTCAGCCCCCCAGAACGGTCCGTCCCC...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCTGTGCGGCGGCAGCTaGTGCTGCCGCTTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHLCGGS*CCRFLG Trigger: GCCAAGGAAGCGGCAGCAGCAGCTGCCGCCGCACAG...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCCGCTGGGGGCGCGGCTaGGACTCACCAGCGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRRWGRG*DSPAPW Trigger: CCACGGCGCTGGTGAGTCTCAGCCGCGCCCCCAGCG...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAACCCCCGCGGACATCGTaGGCTTCAGCGCCTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQPPRTS*ASAPRS Trigger: AGAGCGAGGCGCTGAAGCTCACGATGTCCGCGGGGG...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAACAAGGCTCCAGTTCCTaGAGGTGCGCTGGGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQQGSSS*RCAGGA Trigger: CGCGCCCCCAGCGCACCTCCAGGAACTGGAGCCTTG...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACATGAGGTCCCAGAGGTaGAGGGGGCGGAGGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHMRSQR*RGRRWS Trigger: GGACCACCTCCGCCCCCTCCACCTCTGGGACCTCAT...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAACTCCTCCGCGCGGTTaGGCAGGCTCTCGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQTPPRG*AGSRSA Trigger: AGCTGAGCGAGAGCCTGCGCAACCGCGCGGAGGAGT...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAATGTCTGCTACCGACATaGGGGCAGCCATGGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQCLLPT*GQPWGT Trigger: CGTCCCCCATGGCTGCCCTCATGTCGGTAGCAGACA...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACGGCACGGAGGCGGGTaGCACCGGGCTGCTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKRHGGG*HRAAAV Trigger: AACAGCAGCAGCCCGGTGTCACCCGCCTCCGTGCCG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACTGTTGCTGCTGCTGTTaGTGTGCGGCGGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHCCCCC*CAAAAA Trigger: AGCAGCTGCCGCCGCACAGCAACAGCAGCAGCAACA...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCGCCTCGCTCTGGTTTaGCATCCACTGCTGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHRLALV*HPLLPL Trigger: CAGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCG...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAATCTTGGAAGCAACCGTaGGCCCGCTTCAGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQSWKQP*ARFSWR Trigger: ACGCCAGCTGAAGCGGGCTCACGGTTGCTTCCAAGA...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACAGGTCCCCATTGCGTaGTGCCAGGCGACGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKQVPIA*CQATLA Trigger: GGCCAGCGTCGCCTGGCATCACGCAATGGGGACCTG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAGATACTCGAACCGGCTaGGTTGTTCCACCGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQDTRTG*VVPPQR Trigger: CCGCTGCGGTGGAACAACGCAGCCGGTTCGAGTATC...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACTCTGCGGCAATAGGTTaGGGGGCACGGTTAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHSAAIG*GARLAE Trigger: CTCAGCTAACCGTGCCCCCCAACCTATTGCCGCAGA...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACGGGCACGCCCTCCTTaGAGAAGCGCACAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKRARPP*RSAQPQ Trigger: CTGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAACCGTCCTTGGGCGAATaGGCTGTGCCCAAAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQPSLGE*AVPKVS Trigger: AGACACTTTGGGCACAGCTCATTCGCCCAAGGACGG...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACTGCTGCTGTTGCTGTaGGGCGGCAGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKLLLLL*GGSCCC Trigger: GCAGCAGCAGCTGCCGCCGCACAGCAACAGCAGCAG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACCGATCCAGGCCTCTTaGCAGCAGCACCCACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKPIQAS*QQHPRP Trigger: TGGGCGTGGGTGCTGCTGGCAAGAGGCCTGGATCGG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACACGCTCCTGGTCCGTaGTCGACACCGATCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKHAPGP*STPIQA Trigger: GGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGGCTCTCGCTCAGCTCTaGCAAGGCCTCAGCGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEALAQL*QGLSVA Trigger: CGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGC...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACATCCACTGCTGCCTCTaGTGTTCCTCACCGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHIHCCL*CSSPSF Trigger: GAAGCTCGGTGAGGAACAGCAGAGGCAGCAGTGGAT...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACTCGAGTGCACTGAACTaGCGTCCTTGGGCGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHSSALN*RPWANE Trigger: CTCATTCGCCCAAGGACGGCAGTTCAGTGCACTCGA...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCGCCACCACCCGGGTTaGGCAGCCCGGTCACCAACC | + |
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Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLIRHHPG*AARSPT Trigger: GGTTGGTGACCGGGCTGCCCAACCCGGGTGGTGGCG...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGCCATCTTGGGCTTGTTaGCCCACTCCTCCGCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEPSWAC*PTPPRG Trigger: ACCGCGCGGAGGAGTGGGCCAACAAGCCCAAGATGG...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACGGCATTTCTCTCCGCTaGGGCAATACACCTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: QQSLLRAINSVPRQTFCHGISLR*GNTPHL Trigger: CAGGTGAGGTGTATTGCCCCAGCGGAGAGAAATGCC...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCTGCAGCCAGCCAGCGTaGGCAGCGTGTCGCGGACCA | + |
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Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLICSQPA*AACRGP Trigger: TGGTCCGCGACACGCTGCTCACGCTGGCTGGCTGCA...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCGCGAGTGGTCCTTCTTaGAGCGCACCTCGTAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRASGPS*SAPRRA Trigger: CGCCCTACGAGGTGCGCTTCAAGAAGGACCACTCGC...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGCCTGGTACATCTGTTTaGCCACCCCAGACGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEPGTSV*PPQTRW Trigger: CCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGG...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGTCCTTTTGCGCAGGCTaGACGCTGCACCCCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPINIILLNTNQLILQMKSFCAG*TLHPGP Trigger: CGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAAAGGA...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGTTTTGGGGGTGTACTTaGTCCATGCCCGGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEFWGCT*SMPGWA Trigger: CGCCCACCCGGGCATGGACCAAGTACACCCCCAAAA...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGTGCTGTTGTTGCTGCTaGTGTTGCTGTGCGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVECCCCC*CCCAAA Trigger: TGCCGCCGCACAGCAACAGCAGCAGCAACAACAGCA...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGCAGTCGCCAGAGCCGTaGTTCTTCTCGTACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEQSPEP*FFSYSR Trigger: CCTGGAGTACGAGAAGAAGCACGGCTCTGGCGACTG...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAAGCGGGGTGGTCCGATTaGAATGAGGTCCCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKAGWSD*NEVPEV Trigger: CACCTCTGGGACCTCATTCCAATCGGACCACCCCGC...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCGCCTCAGCGTTGCGCTaGTTCTCCTTTAGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRASALR*FSFSSR Trigger: GCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGC...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGCCAAGGCCTCAGCGTTaGGCTGCTTCTCCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEPRPQR*AASPLA Trigger: AGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGG...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACGCTGGAGTACACATTaGCGGAGCCCGTGGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKRWSTH*RSPWDT Trigger: AGTATCCCACGGGCTCCGGCAATGTGTACTCCAGCG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTTTGCAGTTATATTCACAATTCTACATCTTGGTGGATAGGGGAGGTGGAGTTTGCCATCCACTGCTaGCTCTGCTGTTCCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TFCSYIHNSTSWWIGEVEFAIHC*LCCSSP Trigger: CGGTGAGGAACAGCAGAGGCAGCAGTGGATGGCAAA...CTCCACCTCCCCTATCCACCAAGATGTAGAATTGTGAATATAACTGCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCGAATCCGGAATGTTTTaGGGGTGTACTTGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QQQSLLRAINSVPRQTFCESGMF*GCTWSM Trigger: CATGGACCAAGTACACCCCCAAAACATTCCGGATTC...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAATCCTCCAAACGTTCGTaGCAAATGGTACAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLLRAINSVPRQTFCHQSSKRS*QMVQQR Trigger: CCTCTGCTGTACCATTTGCCACGAACGTTTGGAGGA...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCAACCATCGACGTGGTTaGGCTGCTGCTGTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRNHRRG*AAAVAA Trigger: AGCAGCAACAGCAGCAGCTCAACCACGTCGATGGTT...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCGGCCAAAGTCCTTCATaGAATCCTGGTACATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQSLLRAINSVPRQTFCGQSPS*NPGTSV Trigger: AACAGATGTACCAGGATTGCATGAAGGACTTTGGCC...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCCGACCCAAAAGCGAGTaGTCCTTCTTGAAGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRRPKSE*SFLKRT Trigger: GGTGCGCTTCAAGAAGGACCACTCGCTTTTGGGTCG...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCTCACCTGTGGCCCCCTaGGCCTTGATACTCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRSPVAP*ALILSL Trigger: TAGAGAGAGTATCAAGGCCCAGGGGGCCACAGGTGA...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR TCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCGGGACAGACGGACACTaGACGAAATGCGTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLIGTDGH*TKCVSS Trigger: GGAGGACACGCATTTCGTTCAGTGTCCGTCTGTCCC...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCACGTGGTTGAGCTGCTaGTGTTGCTGCTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRTWLSC*CCCCCC Trigger: GCAACAACAGCAGCAACAGCAGCAGCTCAACCACGT...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAATGGTTTGCCATCCACTaGTGCCTCTGCTGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRQTFCHQINANEYDAKWFAIH*CLCCSS Trigger: TGAGGAACAGCAGAGGCAGCAGTGGATGGCAAACCA...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTGCTGAGGATGAGTTaGGGCTCTGGCGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLILLRMS*GSGGSA Trigger: AGCTGAACCGCCAGAGCCCCAACTCATCCTCAGCAG...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGTGTCGCGGACCATCTTaGGCTTGTTGGCCCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPINIILLNTNQLILQMKCRGPS*ACWPTP Trigger: AGGAGTGGGCCAACAAGCCCAAGATGGTCCGCGACA...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGAACGTTCGTGGCAAATaGTACAGCAGAGGGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DPINIILLNTNQLILQMKNVRGK*YSRGVR Trigger: GCGGACCCCTCTGCTGTACCATTTGCCACGAACGTT...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR GCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCTCGACGTGGTTGAGCTaGTGCTGTTGCTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLISTWLS*CCCCCC Trigger: ACAACAGCAGCAACAGCAGCAGCTCAACCACGTCGA...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCTCCTTCATGCAATCCTaGTACATCTGTTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QNKIKYRLQHWGCLERRRSFMQS*YICLAT Trigger: GGTGGCCAAACAGATGTACCAGGATTGCATGAAGGA...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCGATCACGAATTCTATaGGGTCGGCGCCTTCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLIRSRIL*GRRLRN Trigger: ATTACGAAGGCGCCGACCGCATAGAATTCGTGATCG...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR GCA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCGTTGCAATTTCGCCCTaGATGAAGGCCCAAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YDAKDPINIILLNTNQLIVAISP*MKAQGT Trigger: TGTACCTTGGGCCTTCATGCAGGGCGAAATTGCAAC...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS-3UTR CCA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGGGGAAACAAAATTTGTaGCTAGGGACAGACGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DPINIILLNTNQLILQMKGKQNL*LGTDGH Trigger: GTGTCCGTCTGTCCCTAGCCACAAATTTTGTTTCCC...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| 3UTR CAA 72 bp | CATAACATTTACAAAAATACACACCAGCAGCAGTCGTaGCTAAGGGCTATTAATTCTGTACCTAGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HNIYKNTHQQQS*LRAINSVPRQT Trigger: TGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTGGTGTGTATTTTTGTAAATGTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 90 bp | TGCACCCCGGCCCGTGGGCGCCGCGGGTGGCAAGGCTCCAGTTCCTaGAGGTGCGCTGGGGGCGCGGCTGAGACTCACCAGCGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTPARGRRGWQGSSS*RCAGGAAETHQRRG Trigger: CCCACGGCGCTGGTGAGTCTCAGCCGCGCCCCCAGCGCACCTCCAGGAACTGGAGCCTTGCCACCCGCGGCGCCCACGGGCCGGGGTGCA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 90 bp | TTTGCGCAGGCTGGACGCTGCACCCCGGCCCGTGGGCGCCGCGGGTaGCAAGGCTCCAGTTCCTGGAGGTGCGCTGGGGGCGCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FAQAGRCTPARGRRG*QGSSSWRCAGGAAE Trigger: CTCAGCCGCGCCCCCAGCGCACCTCCAGGAACTGGAGCCTTGCCACCCGCGGCGCCCACGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 90 bp | GGGATGCCTTCCTTTTGCGCAGGCTGGACGCTGCACCCCGGCCCGTaGGCGCCGCGGGTGGCAAGGCTCCAGTTCCTGGAGGTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GMPSFCAGWTLHPGP*APRVARLQFLEVRW Trigger: CCAGCGCACCTCCAGGAACTGGAGCCTTGCCACCCGCGGCGCCCACGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAAAGGAAGGCATCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS TCA 90 bp | CTAGGTAGGGCTGGGGCAGCATGTCCGCGCCGGGCACGCCCTCCTTaGAGAAGCGCACAGCCTCAGGCAGTAGGTCCCCAAGTAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGRAGAACPRRARPP*RSAQPQAVGPQVGA Trigger: GGCGCCTACTTGGGGACCTACTGCCTGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGGCGCGGACATGCTGCCCCAGCCCTACCTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | CCCCCGCCACCACCCGGGTTGGGCAGCCCGGTCACCAACCCACTATaGGTCCCACGCCGAGAAGCCACCGATGTTGCTGCTGAGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPPPGLGSPVTNPL*VPRREATDVAAEDE Trigger: CTCATCCTCAGCAGCAACATCGGTGGCTTCTCGGCGTGGGACGCATAGTGGGTTGGTGACCGGGCTGCCCAACCCGGGTGGTGGCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | TGTCGCGGACCATCTTGGGCTTGTTGGCCCACTCCTCCGCGCGGTTaGGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRGPSWACWPTPPRG*AGSRSALPRPQRCA Trigger: AGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAACCGCGCGGAGGAGTGGGCCAACAAGCCCAAGATGGTCCGCGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | CTGCTGTTGTTGCTGCTGCTGTTGCTGTGCGGCGGCAGCTGCTGCTaGCGCTTCCTTGGCGGACAAGGCCACCGTCTTGACCCCGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLCGGSCC*RFLGGQGHRLDPDW Trigger: CCAGTCGGGGTCAAGACGGTGGCCTTGTCCGCCAAGGAAGCGGCAGCAGCAGCTGCCGCCGCACAGCAACAGCAGCAGCAACAACAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | TTAGCTCACGCTCCTGGTCCGTGCTCGACACCGATCCAGGCCTCTTaGCAGCAGCACCCACGCCCACCTCTGCCACCGTCGACGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LAHAPGPCSTPIQAS*QQHPRPPLPPSTKS Trigger: CGACTTCGTCGACGGTGGCAGAGGTGGGCGTGGGTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | TTGCTGCTGTTGTTGCTGCTGCTGTTGCTGTGCGGCGGCAGCTGCTaGTGCCGCTTCCTTGGCGGACAAGGCCACCGTCTTGACCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLLCGGSC*CRFLGGQGHRLDPD Trigger: GTCGGGGTCAAGACGGTGGCCTTGTCCGCCAAGGAAGCGGCAGCAGCAGCTGCCGCCGCACAGCAACAGCAGCAGCAACAACAGCAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | CTGTTGCTGCTGTTGTTGCTGCTGCTGTTGCTGTGCGGCGGCAGCTaGTGCTGCCGCTTCCTTGGCGGACAAGGCCACCGTCTTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLLLCGGS*CCRFLGGQGHRLDP Trigger: GGGGTCAAGACGGTGGCCTTGTCCGCCAAGGAAGCGGCAGCAGCAGCTGCCGCCGCACAGCAACAGCAGCAGCAACAACAGCAGCAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | CCTCAGCGTTGCGCTGCTTCTCCTTTAGCTCACGCTCCTGGTCCGTaGTCGACACCGATCCAGGCCTCTTGCCAGCAGCACCCACGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQRCAASPLAHAPGP*STPIQASCQQHPRP Trigger: TGGGCGTGGGTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | CGCGGTTGCGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTaGGCTGCTTCTCCTTTAGCTCACGCTCCTGGTCCGTGCTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RGCAGSRSALPRPQR*AASPLAHAPGPCST Trigger: TGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAACCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 90 bp | GCCAAGGCCTCAGCGTTGCGCTGCTTCTCCTTTAGCTCACGCTCCTaGTCCGTGCTCGACACCGATCCAGGCCTCTTGCCAGCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AKASALRCFSFSSRS*SVLDTDPGLLPAAP Trigger: GGGTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | TGCGCTCAGGCCATAACGCTCCAGACCGGACGGGGCGGCCAACACTaGAGGTTTGGTGGAACCATCGACGTGGTTGAGCTGCTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAQAITLQTGRGGQH*RFGGTIDVVELLLL Trigger: CAACAGCAGCAGCTCAACCACGTCGATGGTTCCACCAAACCTGCAGTGTTGGCCGCCCCGTCCGGTCTGGAGCGTTATGGCCTGAGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | TTGCGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTGCGCTaGTTCTCCTTTAGCTCACGCTCCTGGTCCGTGCTCGACACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRRLSLSSAKASALR*FSFSSRSWSVLDTD Trigger: ATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 90 bp | CTGCTGCCTCTGCTGTTCCTCACCGAGCTTCAGTGCGCTTTCAGCTaGGTCTGGAGGCTCCGGGGATGCCTTCCTTTTGCGCAGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPLLFLTELQCAFS*VWRLRGCLPFAQAG Trigger: TCCAGCCTGCGCAAAAGGAAGGCATCCCCGGAGCCTCCAGACTCAGCTGAAAGCGCACTGAAGCTCGGTGAGGAACAGCAGAGGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 90 bp | GCCTCAGGCAGTAGGTCCCCAAGTAGGCGCCAGTCGCCAGAGCCGTaGTTCTTCTCGTACTCCAGGTACTTGAAGCCAGAGGACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSRSPSRRQSPEP*FFSYSRYLKPEDRP Trigger: GGGTCTGTCCTCTGGCTTCAAGTACCTGGAGTACGAGAAGAAGCACGGCTCTGGCGACTGGCGCCTACTTGGGGACCTACTGCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 90 bp | CGGGCTGCTGCTGTTTCGCCTAGCAGATGCAGTGGTCGAGTGCACTaGACTGCCGTCCTTGGGCGAATGAGCTGTGCCCAAAGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAAAVSPSRCSGRVH*TAVLGRMSCAQSVC Trigger: GCAGACACTTTGGGCACAGCTCATTCGCCCAAGGACGGCAGTTCAGTGCACTCGACCACTGCATCTGCTAGGCGAAACAGCAGCAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 90 bp | GCGGCCAACACTGCAGGTTTGGTGGAACCATCGACGTGGTTGAGCTaGTGCTGTTGCTGCTGTTGTTGCTGCTGCTGTTGCTGTGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AANTAGLVEPSTWLS*CCCCCCCCCCCCAA Trigger: CGCCGCACAGCAACAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCTCAACCACGTCGATGGTTCCACCAAACCTGCAGTGTTGGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 90 bp | GCGGACATCGTGAGCTTCAGCGCCTCGCTCTGGTTTGCCATCCACTaGTGCCTCTGCTGTTCCTCACCGAGCTTCAGTGCGCTTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ADIVSFSASLWFAIH*CLCCSSPSFSALSA Trigger: AGCTGAAAGCGCACTGAAGCTCGGTGAGGAACAGCAGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCGCTGAAGCTCACGATGTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 90 bp | GCAGATGCAGTGGTCGAGTGCACTGAACTGCCGTCCTTGGGCGAATaGGCTGTGCCCAAAGTGTCTGCTACCGACATGAGGGCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ADAVVECTELPSLGE*AVPKVSATDMRAAM Trigger: CATGGCTGCCCTCATGTCGGTAGCAGACACTTTGGGCACAGCTCATTCGCCCAAGGACGGCAGTTCAGTGCACTCGACCACTGCATCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 90 bp | GTGAGCTTCAGCGCCTCGCTCTGGTTTGCCATCCACTGCTGCCTCTaGTGTTCCTCACCGAGCTTCAGTGCGCTTTCAGCTGAGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSFSASLWFAIHCCL*CSSPSFSALSAESG Trigger: TCCAGACTCAGCTGAAAGCGCACTGAAGCTCGGTGAGGAACAGCAGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCGCTGAAGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCTAGATTGAAGAGGAGGTGGTCTAGGGCAAAGGAGGTCGCTGCCCTGCGGGGAATCCGGAATGTTTaGGGGGTGTACTTGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSRLKRRWSRAKEVAALRGIRNV*GVYLVH Trigger: ATGGACCAAGTACACCCCCAAAACATTCCGGATTCC...CCGCAGGGCAGCGACCTCCTTTGCCCTAGACCACCTCCTCTTCAATCTAGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CCA 90 bp | TTGAAGCCAGAGGACAGACCCCGGCCAAAGTCCTTCATGCAATCCTaGTACATCTGTTTGGCCACCCCAGACGCGCTGGAGTACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LKPEDRPRPKSFMQS*YICLATPDALEYTL Trigger: CAATGTGTACTCCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGGATTGCATGAAGGACTTTGGCCGGGGTCTGTCCTCTGGCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCCGGGCACGCCCTCCTaGAAGAAGCGCACAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QQQSLLRAINSVPRQTFCPGTPS*KKRTAS Trigger: TGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGG...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCCCGCCACCACCCGGGTaGGGCAGCCCGGTCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNKIKYRLQHWGCLERRRPPPPG*GSPVTN Trigger: GTTGGTGACCGGGCTGCCCAACCCGGGTGGTGGCGG...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCGTGTCGCGGACCATCTaGGGCTTGTTGGCCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQQSLLRAINSVPRQTFCVSRTI*GLLAHS Trigger: GGAGTGGGCCAACAAGCCCAAGATGGTCCGCGACAC...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCCTCGAACCGGCTGCGTaGTTCCACCGCAGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QNKIKYRLQHWGCLERRRLEPAA*FHRSGG Trigger: GCCGCCGCTGCGGTGGAACAACGCAGCCGGTTCGAG...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAGCTGCTGAGGATGAGTaGGGGCTCTGGCGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLRAINSVPRQTFCHQAAEDE*GLWRFS Trigger: GCTGAACCGCCAGAGCCCCAACTCATCCTCAGCAGC...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACACTCCTCCGCGCGGTaGCGCAGGCTCTCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPRQTFCHQINANEYDAKHSSAR*RRLSLS Trigger: GCTGAGCGAGAGCCTGCGCAACCGCGCGGAGGAGTG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAGCGCTGGAGTACACATaGCCGGAGCCCGTGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLRAINSVPRQTFCHQALEYT*PEPVGY Trigger: GTATCCCACGGGCTCCGGCAATGTGTACTCCAGCGC...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACGAACCATCGACGTGGTaGAGCTGCTGCTGTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSLLRAINSVPRQTFCHEPSTW*SCCCCC Trigger: GCAGCAACAGCAGCAGCTCAACCACGTCGATGGTTC...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACGAGAAGCCACCGATGTaGCTGCTGAGGATGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQSLLRAINSVPRQTFCHEKPPM*LLRMSW Trigger: CCAACTCATCCTCAGCAGCAACATCGGTGGCTTCTC...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAAACCATCTTGGGCTTGTaGGCCCACTCCTCCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPRQTFCHQINANEYDAKTILGL*AHSSAR Trigger: CCGCGCGGAGGAGTGGGCCAACAAGCCCAAGATGGT...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAAAATTCAGGTCCCCATaGCGTGATGCCAGGCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLRAINSVPRQTFCHQKFRSP*RDARRR Trigger: GCGTCGCCTGGCATCACGCAATGGGGACCTGAATTT...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCGTGGCCCCCTGGGCCTaGATACTCTCTCTAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QQQSLLRAINSVPRQTFCVAPWA*ILSLEQ Trigger: TTGTTCTAGAGAGAGTATCAAGGCCCAGGGGGCCAC...GCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGCGGGGAGCGACCGTCTaGGAAGCAACCGTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPINIILLNTNQLILQMKRGATV*EATVSP Trigger: CGGGCTCACGGTTGCTTCCAAGACGGTCGCTCCCCG...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACAAAATTAAGTATAGACTTCAACACTGGGGCTGTTTAGAAAGAAGACGCTCCTCTGGTGCCGGCTaGGGGAAGCCGTTAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QNKIKYRLQHWGCLERRRSSGAG*GKPLGP Trigger: AGGTCCTAACGGCTTCCCCAAGCCGGCACCAGAGGA...GCGTCTTCTTTCTAAACAGCCCCAGTGTTGAAGTCTATACTTAATTTTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAATCGTACTCCAGGTACTaGAAGCCAGAGGACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLRAINSVPRQTFCHQSYSRY*KPEDRP Trigger: GGGTCTGTCCTCTGGCTTCAAGTACCTGGAGTACGA...TTGGTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAAGGGGATGCCTTCCTTTaGCGCAGGCTGGACGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPRQTFCHQINANEYDAKGDAFL*RRLDAA Trigger: TGCAGCGTCCAGCCTGCGCAAAAGGAAGGCATCCCC...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAGGCAAACATTCTGCCACCAAATAAATGCTAACGAATATGATGCGAAACAGAGGGGTCCGCTGTaGGCCATAGGGGAATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPRQTFCHQINANEYDAKQRGPL*AIGESG Trigger: TCCGGATTCCCCTATGGCCAACAGCGGACCCCTCTG...TTTCGCATCATATTCGTTAGCATTTATTTGGTGGCAGAATGTTTGCCTAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 90 bp | CTAGAACAAGGGAAACAAAATTTGTGGCTAGGGACAGACGGACACTaGACGAAATGCGTGTCCTCCAAACGTTCGTGGCAAATGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LEQGKQNLWLGTDGH*TKCVSSKRSWQMVQ Trigger: CTGTACCATTTGCCACGAACGTTTGGAGGACACGCATTTCGTTCAGTGTCCGTCTGTCCCTAGCCACAAATTTTGTTTCCCTTGTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCGGACCATCTTGGGCTaGTTGGCCCACTCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YDAKDPINIILLNTNQLIRTILG*LAHSSA Trigger: CGCGGAGGAGTGGGCCAACAAGCCCAAGATGGTCCG...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCGCGCCTCGCTCTGGTTaGCCATCCACTGCTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YDAKDPINIILLNTNQLIAPRSG*PSTAAS Trigger: AGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCGC...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | TATGATGCGAAAGACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCGTTTTGGGGGTGTACTaGGTCCATGCCCGGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YDAKDPINIILLNTNQLIVLGVY*VHARVG Trigger: GCCCACCCGGGCATGGACCAAGTACACCCCCAAAAC...GATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTCTTTCGCATCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTCGTTGCTAAGGGCTATTAATTCTGTACCTAGGCAAACATTCTGCCACCAAGGGAAACAAAATTaGTGGCTAGGGACAGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: QQSLLRAINSVPRQTFCHQGKQN*WLGTDG Trigger: TCCGTCTGTCCCTAGCCACAAATTTTGTTTCCCTTG...GTGGCAGAATGTTTGCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS-3UTR CAA 90 bp | GACCCAATCAATATTATACTGCTTAACACAAACCAGCTTATCCTTCAAATGAAGGCCAACACTGCAGGTTaGGTGGAACCATCGACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DPINIILLNTNQLILQMKANTAG*VEPSTW Trigger: CCACGTCGATGGTTCCACCAAACCTGCAGTGTTGGC...CTTCATTTGAAGGATAAGCTGGTTTGTGTTAAGCAGTATAATATTGATTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CCA 72 bp | GCTGGACGCTGCACCCCGGCCCGTGGGCGCCGCGGGTaGCAAGGCTCCAGTTCCTGGAGGTGCGCTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRCTPARGRRG*QGSSSWRCAGG Trigger: GCCCCCAGCGCACCTCCAGGAACTGGAGCCTTGCCACCCGCGGCGCCCACGGGCCGGGGTGCAGCGTCCAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 72 bp | CTCCCAGGCCGTTGGGCAGCCGGGCGGCGTGGCTGCTaGTCCCCAGACTCACCGGAGGAGGCGGATACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPGRWAAGRRGC*SPDSPEEADTR Trigger: TCGAGTATCCGCCTCCTCCGGTGAGTCTGGGGAGCAGCAGCCACGCCGCCCGGCTGCCCAACGGCCTGGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CCA 72 bp | TCCTTTTGCGCAGGCTGGACGCTGCACCCCGGCCCGTaGGCGCCGCGGGTGGCAAGGCTCCAGTTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFCAGWTLHPGP*APRVARLQFLE Trigger: CTCCAGGAACTGGAGCCTTGCCACCCGCGGCGCCCACGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAAAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | TGCTGCTGCTGTTGCTGTGCGGCGGCAGCTGCTGCTGCCGCTTCCTaGGCGGACAAGGCCACCGTCTTGACCCCGACTGGCGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCAAAAAAAAS*ADKATVLTPTGGGG Trigger: GCCGCCGCCGCCAGTCGGGGTCAAGACGGTGGCCTTGTCCGCCAAGGAAGCGGCAGCAGCAGCTGCCGCCGCACAGCAACAGCAGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | TGGGCGCTAGGCGGCGGGGGCGCCACCTGTAAATTCAGGTCCCCATaGCGTGATGCCAGGCGACGCTGGCCCGGCACGGAGGCGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WALGGGGATCKFRSP*RDARRRWPGTEAGD Trigger: GTCACCCGCCTCCGTGCCGGGCCAGCGTCGCCTGGCATCACGCAATGGGGACCTGAATTTACAGGTGGCGCCCCCGCCGCCTAGCGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 72 bp | GCGGCGGGGGCGCCACCTGTAAATTCAGGTCCCCATTaGGTGATGCCAGGCGACGCTGGCCCGGCACGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGAPPVNSGPH*VMPGDAGPARR Trigger: CCTCCGTGCCGGGCCAGCGTCGCCTGGCATCACGCAATGGGGACCTGAATTTACAGGTGGCGCCCCCGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 72 bp | GGCGGCGGGGGCGCCACCTGTAAATTCAGGTCCCCATaGCGTGATGCCAGGCGACGCTGGCCCGGCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGGATCKFRSP*RDARRRWPGTE Trigger: CTCCGTGCCGGGCCAGCGTCGCCTGGCATCACGCAATGGGGACCTGAATTTACAGGTGGCGCCCCCGCCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | AGTGCGCTTTCAGCTGAGTCTGGAGGCTCCGGGGATGCCTTCCTTTaGCGCAGGCTGGACGCTGCACCCCGGCCCGTGGGCGCCGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SALSAESGGSGDAFL*RRLDAAPRPVGAAG Trigger: ACCCGCGGCGCCCACGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAAAGGAAGGCATCCCCGGAGCCTCCAGACTCAGCTGAAAGCGCACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 72 bp | AGGCTCCAGTTCCTGGAGGTGCGCTGGGGGCGCGGCTaGGACTCACCAGCGCCGTGGGTAGCATGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLQFLEVRWGRG*DSPAPWVAWDS Trigger: GCTGTCCCATGCTACCCACGGCGCTGGTGAGTCTCAGCCGCGCCCCCAGCGCACCTCCAGGAACTGGAGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 72 bp | GCTCCTGGTCCGTGCTCGACACCGATCCAGGCCTCTTaGCAGCAGCACCCACGCCCACCTCTGCCACCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: APGPCSTPIQAS*QQHPRPPLPPS Trigger: CGACGGTGGCAGAGGTGGGCGTGGGTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 72 bp | GGCTGGGGCAGCATGTCCGCGCCGGGCACGCCCTCCTaGAAGAAGCGCACAGCCTCAGGCAGTAGGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWGSMSAPGTPS*KKRTASGSRSP Trigger: TGGGGACCTACTGCCTGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGGCGCGGACATGCTGCCCCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 72 bp | TCAGCTGAGTCTGGAGGCTCCGGGGATGCCTTCCTTTaGCGCAGGCTGGACGCTGCACCCCGGCCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAESGGSGDAFL*RRLDAAPRPVG Trigger: GCCCACGGGCCGGGGTGCAGCGTCCAGCCTGCGCAAAAGGAAGGCATCCCCGGAGCCTCCAGACTCAGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | GTGTCGCGGACCATCTTGGGCTTGTTGGCCCACTCCTCCGCGCGGTaGCGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRTILGLLAHSSAR*RRLSLSSAKASALR Trigger: GCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAACCGCGCGGAGGAGTGGGCCAACAAGCCCAAGATGGTCCGCGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS TCA 72 bp | GCTGGGGCAGCATGTCCGCGCCGGGCACGCCCTCCTTaGAGAAGCGCACAGCCTCAGGCAGTAGGTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGAACPRRARPP*RSAQPQAVGPQ Trigger: TTGGGGACCTACTGCCTGAGGCTGTGCGCTTCTTCAAGGAGGGCGTGCCCGGCGCGGACATGCTGCCCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 72 bp | CCACCCGGGTTGGGCAGCCCGGTCACCAACCCACTATaGGTCCCACGCCGAGAAGCCACCGATGTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPGLGSPVTNPL*VPRREATDVAA Trigger: AGCAGCAACATCGGTGGCTTCTCGGCGTGGGACGCATAGTGGGTTGGTGACCGGGCTGCCCAACCCGGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | GCGCGGTTGCGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTaGCGCTGCTTCTCCTTTAGCTCACGCTCCTGGTCCGTGCTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARLRRLSLSSAKASA*RCFSFSSRSWSVLD Trigger: GTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAACCGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CCA 72 bp | CCGTCGACGAAGTCGATGATGGAGCGGAGGATACAGTaGCTGACACACCCGGGGGACCCCCGAGACATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTKSMMERRIQ*LTHPGDPRDMR Trigger: CCGCATGTCTCGGGGGTCCCCCGGGTGTGTCAGCCACTGTATCCTCCGCTCCATCATCGACTTCGTCGACGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 72 bp | ACCATCTTGGGCTTGTTGGCCCACTCCTCCGCGCGGTaGCGCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TILGLLAHSSAR*RRLSLSSAKAS Trigger: TGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGCGCAACCGCGCGGAGGAGTGGGCCAACAAGCCCAAGATGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | CGGTCACCAACCCACTATGCGTCCCACGCCGAGAAGCCACCGATGTaGCTGCTGAGGATGAGTTGGGGCTCTGGCGGTTCAGCTCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPTHYASHAEKPPM*LLRMSWGSGGSAPG Trigger: CCCCGGAGCTGAACCGCCAGAGCCCCAACTCATCCTCAGCAGCAACATCGGTGGCTTCTCGGCGTGGGACGCATAGTGGGTTGGTGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS CAA 90 bp | TTTAGCTCACGCTCCTGGTCCGTGCTCGACACCGATCCAGGCCTCTaGCCAGCAGCACCCACGCCCACCTCTGCCACCGTCGACGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSRSWSVLDTDPGL*PAAPTPTSATVDEV Trigger: GACTTCGTCGACGGTGGCAGAGGTGGGCGTGGGTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
||
| CDS GCA 72 bp | GCAGGCTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTaGGCTGCTTCTCCTTTAGCTCACGCTCCTGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGSRSALPRPQR*AASPLAHAPGP Trigger: CGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAGCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | GCCGTCCTTGGGCGAATGAGCTGTGCCCAAAGTGTCTaGTACCGACATGAGGGCAGCCATGGGGGACGGACC | + |
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Preference number: 6 (lower is better) Translates to: AVLGRMSCAQSV*YRHEGSHGGRT Trigger: GGTCCGTCCCCCATGGCTGCCCTCATGTCGGTAGCAGACACTTTGGGCACAGCTCATTCGCCCAAGGACGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 72 bp | CGCTCCAGACCGGACGGGGCGGCCAACACTGCAGGTTaGGTGGAACCATCGACGTGGTTGAGCTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSRPDGAANTAG*VEPSTWLSCCC Trigger: ACAGCAGCAGCTCAACCACGTCGATGGTTCCACCAAACCTGCAGTGTTGGCCGCCCCGTCCGGTCTGGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS TCA 72 bp | AGGCAAAGACGCGACCCAAAAGCGAGTGGTCCTTCTTaGAGCGCACCTCGTAGGGCGTGCAGCCAGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RQRRDPKASGPS*SAPRRACSQPA Trigger: CGCTGGCTGGCTGCACGCCCTACGAGGTGCGCTTCAAGAAGGACCACTCGCTTTTGGGTCGCGTCTTTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | GCCATAACGCTCCAGACCGGACGGGGCGGCCAACACTaGAGGTTTGGTGGAACCATCGACGTGGTTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AITLQTGRGGQH*RFGGTIDVVEL Trigger: CAGCTCAACCACGTCGATGGTTCCACCAAACCTGCAGTGTTGGCCGCCCCGTCCGGTCTGGAGCGTTATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | TGCGCTGCTTCTCCTTTAGCTCACGCTCCTGGTCCGTaGTCGACACCGATCCAGGCCTCTTGCCAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: CAASPLAHAPGP*STPIQASCQQH Trigger: GTGCTGCTGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | CTCTCGCTCAGCTCTGCCAAGGCCTCAGCGTTGCGCTaGTTCTCCTTTAGCTCACGCTCCTGGTCCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSLSSAKASALR*FSFSSRSWSVL Trigger: GAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGAGGCCTTGGCAGAGCTGAGCGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | CGCGGACATCGTGAGCTTCAGCGCCTCGCTCTGGTTTaGCATCCACTGCTGCCTCTGCTGTTCCTCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: RGHRELQRLALV*HPLLPLLFLTE Trigger: CTCGGTGAGGAACAGCAGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCGCTGAAGCTCACGATGTCCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 72 bp | GGGTCCGCTGTTGGCCATAGGGGAATCCGGAATGTTTaGGGGGTGTACTTGGTCCATGCCCGGGTGGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GSAVGHRGIRNV*GVYLVHARVGA Trigger: AGCGCCCACCCGGGCATGGACCAAGTACACCCCCAAAACATTCCGGATTCCCCTATGGCCAACAGCGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 72 bp | TCAGCGTTGCGCTGCTTCTCCTTTAGCTCACGCTCCTaGTCCGTGCTCGACACCGATCCAGGCCTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SALRCFSFSSRS*SVLDTDPGLLP Trigger: TGGCAAGAGGCCTGGATCGGTGTCGAGCACGGACCAGGAGCGTGAGCTAAAGGAGAAGCAGCGCAACGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 72 bp | ACCCACTATGCGTCCCACGCCGAGAAGCCACCGATGTaGCTGCTGAGGATGAGTTGGGGCTCTGGCGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: THYASHAEKPPM*LLRMSWGSGGS Trigger: TGAACCGCCAGAGCCCCAACTCATCCTCAGCAGCAACATCGGTGGCTTCTCGGCGTGGGACGCATAGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 90 bp | GACAGACCCCGGCCAAAGTCCTTCATGCAATCCTGGTACATCTGTTaGGCCACCCCAGACGCGCTGGAGTACACATTGCCGGAGCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DRPRPKSFMQSWYIC*ATPDALEYTLPEPV Trigger: CACGGGCTCCGGCAATGTGTACTCCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGGATTGCATGAAGGACTTTGGCCGGGGTCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS TCA 72 bp | CTGCTGTTCCTCACCGAGCTTCAGTGCGCTTTCAGCTaGGTCTGGAGGCTCCGGGGATGCCTTCCTTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLFLTELQCAFS*VWRLRGCLPFA Trigger: CGCAAAAGGAAGGCATCCCCGGAGCCTCCAGACTCAGCTGAAAGCGCACTGAAGCTCGGTGAGGAACAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | AGCGCCTCGCTCTGGTTTGCCATCCACTGCTGCCTCTaGTGTTCCTCACCGAGCTTCAGTGCGCTTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SASLWFAIHCCL*CSSPSFSALSA Trigger: AGCTGAAAGCGCACTGAAGCTCGGTGAGGAACAGCAGAGGCAGCAGTGGATGGCAAACCAGAGCGAGGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 72 bp | GAGGACAGACCCCGGCCAAAGTCCTTCATGCAATCCTaGTACATCTGTTTGGCCACCCCAGACGCGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: EDRPRPKSFMQS*YICLATPDALE Trigger: CTCCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGGATTGCATGAAGGACTTTGGCCGGGGTCTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 90 bp | AGGCGCCAGTCGCCAGAGCCGTGCTTCTTCTCGTACTCCAGGTACTaGAAGCCAGAGGACAGACCCCGGCCAAAGTCCTTCATGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: RRQSPEPCFFSYSRY*KPEDRPRPKSFMQS Trigger: GGATTGCATGAAGGACTTTGGCCGGGGTCTGTCCTCTGGCTTCAAGTACCTGGAGTACGAGAAGAAGCACGGCTCTGGCGACTGGCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS TCA 72 bp | GTGGTCGAGTGCACTGAACTGCCGTCCTTGGGCGAATaGGCTGTGCCCAAAGTGTCTGCTACCGACATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VVECTELPSLGE*AVPKVSATDMR Trigger: CCTCATGTCGGTAGCAGACACTTTGGGCACAGCTCATTCGCCCAAGGACGGCAGTTCAGTGCACTCGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | AGTAGGTCCCCAAGTAGGCGCCAGTCGCCAGAGCCGTaGTTCTTCTCGTACTCCAGGTACTTGAAGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSPSRRQSPEP*FFSYSRYLKPE Trigger: CTCTGGCTTCAAGTACCTGGAGTACGAGAAGAAGCACGGCTCTGGCGACTGGCGCCTACTTGGGGACCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 72 bp | AATCCTGGTACATCTGTTTGGCCACCCCAGACGCGCTaGAGTACACATTGCCGGAGCCCGTGGGATACTCAA | + |
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Preference number: 6 (lower is better) Translates to: NPGTSVWPPQTR*STHCRSPWDTQ Trigger: TTGAGTATCCCACGGGCTCCGGCAATGTGTACTCCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 72 bp | ATCTGTTTGGCCACCCCAGACGCGCTGGAGTACACATaGCCGGAGCCCGTGGGATACTCAATGAACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ICLATPDALEYT*PEPVGYSMNSF Trigger: GAAGCTGTTCATTGAGTATCCCACGGGCTCCGGCAATGTGTACTCCAGCGCGTCTGGGGTGGCCAAACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CAA 72 bp | CGGCCAAAGTCCTTCATGCAATCCTGGTACATCTGTTaGGCCACCCCAGACGCGCTGGAGTACACATTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPKSFMQSWYIC*ATPDALEYTLP Trigger: CGGCAATGTGTACTCCAGCGCGTCTGGGGTGGCCAAACAGATGTACCAGGATTGCATGAAGGACTTTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS GCA 72 bp | ACTGCAGGTTTGGTGGAACCATCGACGTGGTTGAGCTaGTGCTGTTGCTGCTGTTGTTGCTGCTGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TAGLVEPSTWLS*CCCCCCCCCCC Trigger: GCAACAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCTCAACCACGTCGATGGTTCCACCAAACCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS CCA 72 bp | TCTCCGCTGGGGCAATACACCTCACCTGTGGCCCCCTaGGCCTTGATACTCTCTCTAGAACAAGGGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: SPLGQYTSPVAP*ALILSLEQGKQ Trigger: TTGTTTCCCTTGTTCTAGAGAGAGTATCAAGGCCCAGGGGGCCACAGGTGAGGTGTATTGCCCCAGCGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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| CDS TCA 72 bp | GGGAAACAAAATTTGTGGCTAGGGACAGACGGACACTaGACGAAATGCGTGTCCTCCAAACGTTCGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GKQNLWLGTDGH*TKCVSSKRSWQ Trigger: TTGCCACGAACGTTTGGAGGACACGCATTTCGTTCAGTGTCCGTCTGTCCCTAGCCACAAATTTTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038422.8 |
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