Pregenerated sensors for IRF2BP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051495Ensembl transcript IDs: ENSMUST00000054960.9
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCCTCCTGGCAGCATCCAAGGCTGTGACTATCAACGTGCACACTaGAGTAAGCACTCGTCACAAGGGGGACAGCACGCAGGCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: GPPGSIQGCDYQRAH*SKHSSQGGQHAGKN Trigger: GTTCTTGCCTGCGTGCTGTCCCCCTTGTGACGAGTGCTTACTGCAGTGTGCACGTTGATAGTCACAGCCTTGGATGCTGCCAGGAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTaGGTCACAGTTAGGATCAACTGGTCTAATCATGCAAGCCCGGCT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVHLPQRETCRT*VTVRINWSNHASPA Trigger: AGCCGGGCTTGCATGATTAGACCAGTTGATCCTAACTGTGACTCAGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CCA 90 bp | TCACAGCAGAAGCAGTGTTGGGAACCTGACATCTCTACCCAGCTGTaGACTACATCCACAGTGTCATCAAGGACAAGAAAAGATCAACCG | + |
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Preference number: 1 (lower is better) Translates to: SQQKQCWEPDISTQL*TTSTVSSRTRKDQP Trigger: CGGTTGATCTTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGCTGGGTAGAGATGTCAGGTTCCCAACACTGCTTCTGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 90 bp | GGCCTTGCTACTAGTAGAGAGAGAAAAACCACAGGTGGCCGTTTCTaGTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: GLATSRERKTTGGRF*CWTDFCSAGWFFIL Trigger: AAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCTACTAGTAGCAAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 90 bp | GGCTGTGAACAACACACAAACCATAGTAGACTTAGAAGCCATGATTaGGCCGACAAGGCCAAGTTACAAACACCTCAAGTCAGGGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: GCEQHTNHSRLRSHD*ADKAKLQTPQVRVE Trigger: CTCAACCCTGACTTGAGGTGTTTGTAACTTGGCCTTGTCGGCTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTGTTCACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 90 bp | CTTGCTACTAGTAGAGAGAGAAAAACCACAGGTGGCCGTTTCTGCTaGTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LATSRERKTTGGRFC*WTDFCSAGWFFILG Trigger: ACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCTACTAGTAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CCA 90 bp | GCTACTAGTAGAGAGAGAAAAACCACAGGTGGCCGTTTCTGCTGCTaGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: ATSRERKTTGGRFCC*TDFCSAGWFFILGF Trigger: AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCTACTAGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTCACTGGGCCCACCACTaGCAGTGCCCACAGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVYICLRERPVGPHWAHH*QCPQVL Trigger: GAGGACCTGTGGGCACTGTCAGTGGTGGGCCCAGTG...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGGACTACATCCACAGTGTCATCAAGGACAAGAAAAGATCAACCGAGGGCCGGGGAATGCCCTTGTaGCAGGTGTCCCCCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: AVDYIHSVIKDKKRSTEGRGMPL*QVSPFH Trigger: GTGGAAGGGGGACACCTGTCACAAGGGCATTCCCCG...GCCCTCGGTTGATCTTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CAA 90 bp | CTTTCAGCAGCACCTCTGACGACCAGTATTGCAAGAGCTGAACCGTaGACAAGATTCAAACCCCATTTTCCCTCCCTCGGAAAGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LSAAPLTTSIARAEP*TRFKPHFPSLGKVG Trigger: ACCCACCTTTCCGAGGGAGGGAAAATGGGGTTTGAATCTTGTCAACGGTTCAGCTCTTGCAATACTGGTCGTCAGAGGTGCTGCTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGAGCTGGAACCACCGGTaGGGCCACCGAGGAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: ITEAEVHSRKTRQEILYLSWNHR*GHRGGG Trigger: TCCTCCTCCTCGGTGGCCCCACCGGTGGTTCCAGCT...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCGTTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTTACAACCGGTCACGTaGGCAGAGCAAACATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WPFLLLDRLLFSRMVLYSLQPVT*AEQTSA Trigger: AGCTGATGTTTGCTCTGCCCACGTGACCGGTTGTAA...AGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CAA 90 bp | AGCCCTTCACAAATGTCTTTATGGGCAGGTGAAACTGACTCTGCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SPSQMSLWAGETDSA*CVCVCVCVCVHLPQ Trigger: CTGAGGCAGATGTACACACACACACACACACACACACACACACAAAGCAGAGTCAGTTTCACCTGCCCATAAAGACATTTGTGAAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | GCACCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTAACTGGCCTCCAGCCTaGGAGAGGCCAGCGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: APLLVANDLMLFTLKTITNWPPA*ERPARR Trigger: TCTCCTCGCTGGCCTCTCTCAGGCTGGAGGCCAGTT...AGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGGACTACATCCACAGTGTCATCAAGGACAAGAAAAGATCAACCGAGGGCCAAGAGCTGAACCGTTaGCAAGATTCAAACCCCATT | + |
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Preference number: 2 (lower is better) Translates to: AVDYIHSVIKDKKRSTEGQELNR*QDSNPI Trigger: AATGGGGTTTGAATCTTGTCAACGGTTCAGCTCTTG...GCCCTCGGTTGATCTTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATATGGCCGTTTCTGCTGCTaGACAGACTTCTGTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KFERWHTFKTPGGQGKVYGRFCC*TDFCSA Trigger: TGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCC...ATATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | GCACCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTCCTCCCTCGGAAAGGTaGGTGACATTTCCTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: APLLVANDLMLFTLKTITPPSER*VTFPGG Trigger: TCCCCCAGGAAATGTCACCCACCTTTCCGAGGGAGG...AGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAATAAAGCAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGAGAAAAACCACAGGTaGCCGTTTCTGCTGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: KNKAKFERWHTFKTPGGQEKNHR*PFLLLD Trigger: GTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTC...CTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTGCTTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTATTTCCACACCACCCTaGCAACTACTTCTACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLLLDRLLFSRMVLYSWFISTPP*QLLLQL Trigger: CAGCTGTAGAAGTAGTTGTCAGGGTGGTGTGGAAAT...AAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATATTATACAGCCATGTTATaGAGTCTACATTTCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KFERWHTFKTPGGQGKVYYTAML*SLHFPC Trigger: ACAAGGGAAATGTAGACTTCATAACATGGCTGTATA...ATATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATTTCTGTTCAGCAGGATaGTTCTTTATTCTTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QSLKGGTLSKHLVARERYFCSAG*FFILGF Trigger: AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAA...ATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTCTAGAAGCATTTGTTTaGCAAGTGCTCTTTAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: FCCWTDFCSAGWFFILGFLEAFV*QVLFKN Trigger: GTTTTTAAAGAGCACTTGGCAAACAAATGCTTCTAG...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 72 bp | CCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTaGAAGCTTACAACCGGTCACGTGGGCAGAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: PVGPPRRRSTQH*KLTTGHVGRAN Trigger: GTTTGCTCTGCCCACGTGACCGGTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CCA 72 bp | CACCCTGACAACTACTTCTACAGCTGGAACCACCGGTaGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAA | + |
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Preference number: 3 (lower is better) Translates to: HPDNYFYSWNHR*GHRGGGARSTE Trigger: TTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGTTCCAGCTGTAGAAGTAGTTGTCAGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 72 bp | GGTCAGCAGGAAAGCCACCTGATTTCCACACCACCCTaGCAACTACTTCTACAGCTGGAACCACCGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GQQESHLISTPP*QLLLQLEPPVG Trigger: CCCCACCGGTGGTTCCAGCTGTAGAAGTAGTTGTCAGGGTGGTGTGGAAATCAGGTGGCTTTCCTGCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 72 bp | GGCAGCATCCAAGGCTGTGACTATCAACGTGCACACTaGAGTAAGCACTCGTCACAAGGGGGACAGCACGCA | + |
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Preference number: 3 (lower is better) Translates to: GSIQGCDYQRAH*SKHSSQGGQHA Trigger: TGCGTGCTGTCCCCCTTGTGACGAGTGCTTACTGCAGTGTGCACGTTGATAGTCACAGCCTTGGATGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 72 bp | ACTAGTAGAGAGAGAAAAACCACAGGTGGCCGTTTCTaGTGCTGGACAGACTTCTGTTCAGCAGGATGGTTC | + |
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Preference number: 3 (lower is better) Translates to: TSRERKTTGGRF*CWTDFCSAGWF Trigger: GAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCTACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 72 bp | TTCAGCAGCACCTCTGACGACCAGTATTGCAAGAGCTaGACCGTTGACAAGATTCAAACCCCATTTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: FSSTSDDQYCKS*TVDKIQTPFSL Trigger: GAGGGAAAATGGGGTTTGAATCTTGTCAACGGTTCAGCTCTTGCAATACTGGTCGTCAGAGGTGCTGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 72 bp | ATTCTCTTAGTATTTCAGACACACCTAAGGAAAAACTaGAGGCTTCCTCTACCCACACTGGGCCCACCACTG | + |
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Preference number: 3 (lower is better) Translates to: ILLVFQTHLRKN*RLPLPTLGPPL Trigger: CAGTGGTGGGCCCAGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGTCTGAAATACTAAGAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR GCA 72 bp | AGTAGAGAGAGAAAAACCACAGGTGGCCGTTTCTGCTaGTGGACAGACTTCTGTTCAGCAGGATGGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SRERKTTGGRFC*WTDFCSAGWFF Trigger: AAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CCA 72 bp | AGAGAGAGAAAAACCACAGGTGGCCGTTTCTGCTGCTaGACAGACTTCTGTTCAGCAGGATGGTTCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: RERKTTGGRFCC*TDFCSAGWFFI Trigger: AATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCACCTGTGGTTTTTCTCTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR CCA 72 bp | AAGCAGTGTTGGGAACCTGACATCTCTACCCAGCTGTaGACTACATCCACAGTGTCATCAAGGACAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: KQCWEPDISTQL*TTSTVSSRTRK Trigger: TTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGCTGGGTAGAGATGTCAGGTTCCCAACACTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CAA 90 bp | CTTAGTATTTCAGACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGCAAGAGCTGAACCGTaGACAAGATTCAAACCCCAT | + |
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Preference number: 3 (lower is better) Translates to: LSISDTPKEKLQASSTHTARAEP*TRFKPH Trigger: ATGGGGTTTGAATCTTGTCAACGGTTCAGCTCTTGC...AGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGTCTGAAATACTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR-3UTR CAA 90 bp | TGGCCGTTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTCCTGAACACACAATGTaGCAAATAACCTTTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WPFLLLDRLLFSRMVLYSPEHTM*QITFQQ Trigger: CTGCTGAAAGGTTATTTGCAACATTGTGTGTTCAGG...AGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAACGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| 3UTR TCA 72 bp | CAACACACAAACCATAGTAGACTTAGAAGCCATGATTaGGCCGACAAGGCCAAGTTACAAACACCTCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: QHTNHSRLRSHD*ADKAKLQTPQV Trigger: GACTTGAGGTGTTTGTAACTTGGCCTTGTCGGCTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACCGGTCATCGAAGGGCCCCGAGTaGCCGTGCTGGTGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GGATEEEEHAALKAYNRSSKGPE*PCWCSA Trigger: GGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGA...TGACCGGTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR GCA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACAGGGAGAGGGCGGGCTaGTGCTGTTCCTCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TTGGATEEEEHAALKAYNRERAG*CCSSWW Trigger: CCACCAGGAGGAACAGCAGCAGCCCGCCCTCTCCCT...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | CAAGTTCACCCGGGGCCTGCAACACTTAAGGAGCACCTCAGAGCCAGGCTGGTCGTCCTTGGCCGACAGTaGCGGTGGCTTGGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QVHPGPATLKEHLRARLVVLGRQ*RWLGGC Trigger: GCAGCCGCCAAGCCACCGCCACTGTCGGCCAAGGAC...GACCAGCCTGGCTCTGAGGTGCTCCTTAAGTGTTGCAGGCCCCGGGTGAACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR TCA 90 bp | GCTGGAACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTGCATCTTTTGAGGCGTaGCTGCCCCCGGCATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGTTGGATEEEEHAALKAASFEA*LPPALS Trigger: AGACAATGCCGGGGGCAGTCACGCCTCAAAAGATGC...AGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGTTCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | ACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGGGCCCACCACTGTCACCGCGGCCAGTGTaGCCGCAGCACGGCCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: THLRKNCRLPLPTLGPPLSPRPV*PQHGRS Trigger: TGAGCGGCCGTGCTGCGGCCACACTGGCCGCGGTGA...CAGTGGTGGGCCCAGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTCGTTGGGCACCAGGATaGCGTTCGCCGGCGCGGACT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVYICLRERPVGPRWAPG*RSPART Trigger: AGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACG...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | ACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGGGCCCACCACTGGGGGACTGGCCATTCTaGGCCGCTTCAGGCGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: THLRKNCRLPLPTLGPPLGDWPF*AASGGV Trigger: CACACCGCCTGAAGCGGCCCAGAATGGCCAGTCCCC...CAGTGGTGGGCCCAGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACAGAGGCAGTAGGGGGTaGTGGAGACACAAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TTGGATEEEEHAALKAYNRGSRG*WRHKRG Trigger: TCCTCTTTTGTGTCTCCACCACCCCCTACTGCCTCT...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACGGGCCAAGCCTTCTTTaGTTCATAGAGGAGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTGGATEEEEHAALKAYNGPSLL*FIEEGE Trigger: CTCTCCCTCCTCTATGAACCAAAGAAGGCTTGGCCC...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTACCCAACAACCTGCCTaGTGCAGTCAGAGCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVYICLRERPVGPTQQPA*CSQSRL Trigger: GAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGT...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR GCA 90 bp | CGAGGGCCCCGTGTGACCGGTTTCAGAGTAGGCCAGAGAAAGACTCCCCCGACCAGGCTTCCTTTTCCTTaGTGTCCTTGCAACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RGPRVTGFRVGQRKTPPTRLPFP*CPCNCF Trigger: AAAGCAGTTGCAAGGACAGCAAGGAAAAGGAAGCCT...GGTCGGGGGAGTCTTTCTCTGGCCTACTCTGAAACCGGTCACACGGGGCCCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR GCA 90 bp | AGCCAGGCTGTGAACAACACACAAACCATAGTAGACTTAGAAGCCATGATTGAGGCTCCAGTCCTCCGGTaGTGCCGGTGGCCTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SQAVNNTQTIVDLEAMIEAPVLR*CRWPGP Trigger: GGGGCCAGGCCACCGGCAGCACCGGAGGACTGGAGC...CTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTGTTCACAGCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTGCGGCTCCTCCAGTTTaGAGAACCCGTTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYICLRERPVGPAAPPV*RTRWAP Trigger: TGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGC...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCCTGGCAGCATCCAAGGCTGTGACTATCAACGTGCACACTGCAGTAAGTGCTGTTCCTCCTGGTaGTGGAGTGAACCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPPGSIQGCDYQRAHCSKCCSSW*WSEPGW Trigger: CCACCCAGGTTCACTCCACCACCAGGAGGAACAGCA...CTTACTGCAGTGTGCACGTTGATAGTCACAGCCTTGGATGCTGCCAGGAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATATGGCGGGCCGTCTCGATaGCGAACTCCACGCGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KFERWHTFKTPGGQGKVYGGPSR*RTPRGR Trigger: CCGACCGCGTGGAGTTCGTCATCGAGACGGCCCGCC...ATATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTTCGGCCGGACTCCGGTaGGCGGGCTGCGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFSAGLR*AGCAFS Trigger: GGAGAAGGCGCAGCCCGCGCACCGGAGTCCGGCCGA...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTGGCCCCGAGTGGCCGTaGTGGTGCAGCGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLDRLLFSRMVLYSWFGPEWP*WCSARS Trigger: GCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCC...AAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGTATTTCAGACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGGGAGGCTGGCAGGGTaGACCGGCTCCAGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSISDTPKEKLQASSTHTGRLAG*TGSSPP Trigger: CGGAGGACTGGAGCCGGTGCACCCTGCCAGCCTCCC...AGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGTCTGAAATACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | ACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGGGCCCACCACTGGGGAAACAGAACTTGTaGGAAGGGACAGACGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: THLRKNCRLPLPTLGPPLGKQNL*EGTDGH Trigger: GTGCCCGTCTGTCCCTTCGCACAAGTTCTGTTTCCC...CAGTGGTGGGCCCAGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTCTCCTGGTGGTGGAGTaGACCTGGGTGGCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYICLRERPVGPLLVVE*TWVASF Trigger: AAAAGATGCCACCCAGGTTCACTCCACCACCAGGAG...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGCTGTGAACAACACACAAACCATAGTAGACTTAGAAGCCATGATTGAGGAGTGGCCGTGCTGGTaGAGCGCCAGGAGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQAVNNTQTIVDLEAMIEEWPCW*SARSVS Trigger: GGACACGCTCCTGGCGCTGCACCAGCACGGCCACTC...CTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTGTTCACAGCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTCTTTTGAGGCGTGACTaGCCCCGGCATTGTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYICLRERPVGPLLRRD*PRHCLL Trigger: TAGCAGACAATGCCGGGGGCAGTCACGCCTCAAAAG...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | AGTCACAGCAGAAGCAGTGTTGGGAACCTGACATCTCTACCCAGCTGTGGACTAGTTTGGAGAACCCGTTaGGCACCAGGATGCCGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SHSRSSVGNLTSLPSCGLVWRTR*APGCRS Trigger: CGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAAC...TAGTCCACAGCTGGGTAGAGATGTCAGGTTCCCAACACTGCTTCTGCTGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | ACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTGGGCCCACCACTGTTCCCCTTCCGGTTCTaGGGAAGGCTTCCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: THLRKNCRLPLPTLGPPLFPFRF*GRLPFP Trigger: AGGAAAAGGAAGCCTTCCCCAGAACCGGAAGGGGAA...CAGTGGTGGGCCCAGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTAGCTGCGGCGGCGGCTaGAGCAGTAGGTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLDRLLFSRMVLYSWFSCGGG*SSRSLA Trigger: GGCCAAGGACCTACTGCTGCAGCCGCCGCCGCAGCT...AAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCCTGGCAGCATCCAAGGCTGTGACTATCAACGTGCACACTGCAGTAAGTCTCCGCTAGCGCCCTaGTGTTTAATGCTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPPGSIQGCDYQRAHCSKSPLAP*CLMLCL Trigger: CAGACAAAGCATTAAACAGCAGGGCGCTAGCGGAGA...CTTACTGCAGTGTGCACGTTGATAGTCACAGCCTTGGATGCTGCCAGGAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGCCCGAGTGGCCGTGCTaGTGCAGCGCCAGGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITEAEVHSRKTRQEILYLPEWPC*CSARSV Trigger: CACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGG...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTGAGAGGGCGGGCTGCTaGTGTTCCTCCTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFERAGC*CSSWWW Trigger: CCACCACCAGGAGGAACAGCAGCAGCCCGCCCTCTC...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATAAAGCAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGCGAGGGTTCGGGCTCTaGCGATTCAGCTCCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNKAKFERWHTFKTPGGQRGFGL*RFSSGG Trigger: GCCGCCGGAGCTGAATCGCCAGAGCCCGAACCCTCG...CTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTGCTTTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGCTGGGTGGCATCTTTTaGGGCGTGACTGCCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITEAEVHSRKTRQEILYLLGGIF*GVTAPG Trigger: GCCGGGGGCAGTCACGCCTCAAAAGATGCCACCCAG...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGCTGTGAACAACACACAAACCATAGTAGACTTAGAAGCCATGATTGAGGGGCACTGCACAAAGTaGGTATCCTCCAGCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQAVNNTQTIVDLEAMIEGHCTK*VSSSRS Trigger: CGAGCGGCTGGAGGATACTCACTTTGTGCAGTGCCC...CTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTGTTCACAGCCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | GCACCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTCTCCGGTGCGCGGGCTaGGCCTTCTCCTTGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: APLLVANDLMLFTLKTITLRCAG*AFSLLG Trigger: GCCGAGCAAGGAGAAGGCGCAGCCCGCGCACCGGAG...AGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGACTACATCCACAGTGTCATCAAGGACAAGAAAAGATCAACCGAGGGCGGCAGTAGGGGGTGGTaGAGACACAAAAGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AVDYIHSVIKDKKRSTEGGSRGW*RHKRGC Trigger: ACATCCTCTTTTGTGTCTCCACCACCCCCTACTGCC...GCCCTCGGTTGATCTTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATAAAGCAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGTCCTCCAGCCGCTCGTaGCAGAGGGTGCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNKAKFERWHTFKTPGGQSSSRS*QRVQHR Trigger: CCTGTGCTGCACCCTCTGCCACGAGCGGCTGGAGGA...CTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTGCTTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| 3UTR CAA 72 bp | GCACCTCTGACGACCAGTATTGCAAGAGCTGAACCGTaGACAAGATTCAAACCCCATTTTCCCTCCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: APLTTSIARAEP*TRFKPHFPSLG Trigger: TCCGAGGGAGGGAAAATGGGGTTTGAATCTTGTCAACGGTTCAGCTCTTGCAATACTGGTCGTCAGAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTGAGCCGGCTCCTTCTTaGACTTGCTCTCGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFEPAPS*TCSRRA Trigger: GGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTC...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATTGCTGTCCTTGCAACTaGTTTAGACCCGTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLKGGTLSKHLVARERYCCPCN*FRPVGP Trigger: GGGGCCAACGGGTCTAAAGCAGTTGCAAGGACAGCA...ATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTAGGCCCAGGGGACATTaGAGCCCACCAGAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFRPRGH*SPPEDT Trigger: AGTGTCCTCTGGTGGGCTCCAATGTCCCCTGGGCCT...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGGTGGTCCGGTTGGAATaGGGAGAGGCAGTAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITEAEVHSRKTRQEILYLVVRLE*GEAVGG Trigger: ACCCCCTACTGCCTCTCCTCATTCCAACCGGACCAC...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGACCCGTTGGCCCCGTTaGCCTCGAAACCCAACAACC | + |
|
Preference number: 4 (lower is better) Translates to: ITEAEVHSRKTRQEILYLTRWPR*PRNPTT Trigger: GGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGT...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | ATAACAGAGGCCGAGGTGCACTCAAGAAAAACCAGACAAGAAATACTGTATTTGGCTGCCATTGGGGACTaGCCATTCTGGGCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITEAEVHSRKTRQEILYLAAIGD*PFWAAS Trigger: TGAAGCGGCCCAGAATGGCCAGTCCCCAATGGCAGC...CAAATACAGTATTTCTTGTCTGGTTTTTCTTGAGTGCACCTCGGCCTCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTAATCAGGGCTGCCATTaGGGACTGGCCATTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFNQGCH*GLAILG Trigger: GCCCAGAATGGCCAGTCCCCAATGGCAGCCCTGATT...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTGCTGCTGTTCCTCCTaGTGGTGGAGTGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLDRLLFSRMVLYSWFCCCSS*WWSEPG Trigger: CCCAGGTTCACTCCACCACCAGGAGGAACAGCAGCA...AAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | CCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTTCAGCGCGGCAGAACCGTTaGCCAGAGGCACCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLVANDLMLFTLKTITSARQNR*PEAPEW Trigger: CCACTCTGGTGCCTCTGGTCAACGGTTCTGCCGCGC...TGAAGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTTGTAGCAATCTCTCCTTaGATGAAGGCCCAGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FCCWTDFCSAGWFFILGFVAISP*MKAQGT Trigger: TGTCCCCTGGGCCTTCATGCAAGGAGAGATTGCTAC...AAAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR TCA 90 bp | GCACCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTCAATCTCTCCTTGCATaGAGGCCCAGGGGACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: APLLVANDLMLFTLKTITQSLLA*RPRGHW Trigger: CCAATGTCCCCTGGGCCTTCATGCAAGGAGAGATTG...AGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGTATTTCAGACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTTTTCCTTGCTGTCCTTaGAACTGCTTTAGACCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSISDTPKEKLQASSTHTFPCCP*NCFRPV Trigger: AACGGGTCTAAAGCAGTTGCAAGGACAGCAAGGAAA...AGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGTCTGAAATACTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS-3UTR CCA 90 bp | GCACCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTTGTTCCTCCTGGTGGTaGAGTGAACCTGGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: APLLVANDLMLFTLKTITCSSWW*SEPGWH Trigger: ATGCCACCCAGGTTCACTCCACCACCAGGAGGAACA...AGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| 3UTR CAA 72 bp | CAAATGTCTTTATGGGCAGGTGAAACTGACTCTGCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: QMSLWAGETDSA*CVCVCVCVCVH Trigger: ATGTACACACACACACACACACACACACACACACAAAGCAGAGTCAGTTTCACCTGCCCATAAAGACATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| 3UTR CAA 72 bp | CTAAGGGCACCACTACTGGTAGCTAATGACCTGATGTaGTTTACATTAAAAACAATCACTTCACTAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRAPLLVANDLM*FTLKTITSLRQ Trigger: TTGCCTTAGTGAAGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGGTGCCCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CCA 90 bp | GCGGCGGCTGCAGCAGTAGGTCCTTGGCCGACAGTGGCGGTGGCTTaGCGGCTGCGGGCTGTGCACCGGTCGGGGAGCGGCCCTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAVGPWPTVAVA*RLRAVHRSGSGPPG Trigger: TCCCGGAGGGCCGCTCCCCGACCGGTGCACAGCCCGCAGCCGCCAAGCCACCGCCACTGTCGGCCAAGGACCTACTGCTGCAGCCGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CCA 90 bp | CACCAGGATGCCGTTCGCCGGCGCGGACTGCTGCGCGGCCGACTGTaGGAGGCCTGCACCCGCACGCGTGCTGAAGTCGGAGGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HQDAVRRRGLLRGRL*EACTRTRAEVGGQA Trigger: CGCCTGGCCTCCGACTTCAGCACGCGTGCGGGTGCAGGCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 90 bp | CGTGCTCCGCCGCCGCGCTCGACACAGACGCCGGGCGTTTGTGGGTaGCCAACTCGGCGGGCTGAGCTCCCAGGCCCGGTGTTCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPPPRSTQTPGVCG*PTRRAELPGPVFRS Trigger: TGAGCGGAACACCGGGCCTGGGAGCTCAGCCCGCCGAGTTGGGCACCCACAAACGCCCGGCGTCTGTGTCGAGCGCGGCGGCGGAGCACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 90 bp | ATAAGCTGTCGGCCGGACTCCGGTGCGCGGGCTGCGCCTTCTCCTTaGTCGGCTCGCGCGCCTCGTGCTCCGCCGCCGCGCTCGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ISCRPDSGARAAPSP*SARAPRAPPPRSTQ Trigger: CTGTGTCGAGCGCGGCGGCGGAGCACGAGGCGCGCGAGCCGAGCAAGGAGAAGGCGCAGCCCGCGCACCGGAGTCCGGCCGACAGCTTAT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CCA 90 bp | CTTTGCCTGCACCCTCGGCGCTCAGCTCGCTGGCCCCGGCCGCGCTaGATAAGCTGTCGGCCGGACTCCGGTGCGCGGGCTGCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLHPRRSARWPRPR*ISCRPDSGARAAPS Trigger: AGAAGGCGCAGCCCGCGCACCGGAGTCCGGCCGACAGCTTATCCAGCGCGGCCGGGGCCAGCGAGCTGAGCGCCGAGGGTGCAGGCAAAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 90 bp | GAGAACCCGTTGGGCACCAGGATGCCGTTCGCCGGCGCGGACTGCTaGGCGGCCGACTGTGGGAGGCCTGCACCCGCACGCGTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ENPLGTRMPFAGADC*AADCGRPAPARVLK Trigger: CTTCAGCACGCGTGCGGGTGCAGGCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 90 bp | TTGGAGAACCCGTTGGGCACCAGGATGCCGTTCGCCGGCGCGGACTaGTGCGCGGCCGACTGTGGGAGGCCTGCACCCGCACGCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LENPLGTRMPFAGAD*CAADCGRPAPARVL Trigger: CAGCACGCGTGCGGGTGCAGGCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 90 bp | GCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTTGGGCACCAGGATaGCGTTCGCCGGCGCGGACTGCTGCGCGGCCGACTGTGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: APAAPPVWRTRWAPG*RSPARTAARPTVGG Trigger: GCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | TCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTTaGGCACCAGGATGCCGTTCGCCGGCGCGGACTGCTGCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGDSAPAAPPVWRTR*APGCRSPARTAARP Trigger: CGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 90 bp | GCCGGCTCCTTCTTGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTaGTGGTGCAGCGCCAGGAGCGTGTCCCGCACCGTCTTAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSFLNLLSKGPEWP*WCSARSVSRTVLGL Trigger: CAGGCCTAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | GAGGGTTCGGGCTCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTTaGAGAACCCGTTGGGCACCAGGATGCCGTTCGCCGGCGCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: EGSGSGDSAPAAPPV*RTRWAPGCRSPART Trigger: AGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCCCGAACCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 90 bp | TCCTTCTTGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTaGAGCGCCAGGAGCGTGTCCCGCACCGTCTTAGGCCTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLNLLSKGPEWPCW*SARSVSRTVLGLLA Trigger: GGCCAGCAGGCCTAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | ACCAGAGTGGGCGGAACGGCGTGTGCACGCCGAGGGTTCGGGCTCTaGCGATTCAGCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGTACARRGFGL*RFSSGGSSSLENPL Trigger: CAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCCCGAACCCTCGGCGTGCACACGCCGTTCCGCCCACTCTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | GGCTCCTTCTTGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTaGTGCAGCGCCAGGAGCGTGTCCCGCACCGTCTTAGGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSFLNLLSKGPEWPC*CSARSVSRTVLGLL Trigger: CAGCAGGCCTAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | GTCAGAGCCGGCTCCTTCTTGAACTTGCTCTCGAAGGGCCCCGAGTaGCCGTGCTGGTGCAGCGCCAGGAGCGTGTCCCGCACCGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VRAGSFLNLLSKGPE*PCWCSARSVSRTVL Trigger: TAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | GCTGGAACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTAGCGCGGCAGAACCGTaGACCAGAGGCACCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGTTGGATEEEEHAALKASAAEP*TRGTRV Trigger: CACTCTGGTGCCTCTGGTCAACGGTTCTGCCGCGCT...AGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGTTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACCCTGGGTGGCATCTTTaGAGGCGTGACTGCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTGGATEEEEHAALKAYNPGWHL*RRDCPR Trigger: CCGGGGGCAGTCACGCCTCAAAAGATGCCACCCAGG...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS TCA 90 bp | CGAAACCCAACAACCTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTTaGACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RNPTTCLLQSEPAPS*TCSRRAPSGRAGAA Trigger: CGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACGACCCGTTGGCCCCGTaGGCCTCGAAACCCAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTGGATEEEEHAALKAYNDPLAP*ASKPNN Trigger: GTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTC...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | GCTGGAACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTGGCTGTGTCTCACCATaGATCTTAGGGGGCCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGTTGGATEEEEHAALKAGCVSP*ILGGPT Trigger: AGTCGGGCCCCCTAAGATCAATGGTGAGACACAGCC...AGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGTTCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 90 bp | AGACCCGTTGGCCCCGTTGGCCTCGAAACCCAACAACCTGCCTGCTaGAGTCAGAGCCGGCTCCTTCTTGAACTTGCTCTCGAAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPVGPVGLETQQPAC*SQSRLLLELALEGP Trigger: GGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGGACTACATCCACAGTGTCATCAAGGACAAGAAAAGATCAACCGAGGGCGGCTGCGCCTTCTCCTaGCTCGGCTCGCGCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AVDYIHSVIKDKKRSTEGGCAFS*LGSRAS Trigger: CGAGGCGCGCGAGCCGAGCAAGGAGAAGGCGCAGCC...GCCCTCGGTTGATCTTTTCTTGTCCTTGATGACACTGTGGATGTAGTCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACGACACTTCTCTCCACTaGGGCAATAGACCTCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTGGATEEEEHAALKAYNDTSLH*GNRPLR Trigger: GCGGAGAGGTCTATTGCCCAAGTGGAGAGAAGTGTC...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 90 bp | TTTAGACCCGTTGGCCCCGTTGGCCTCGAAACCCAACAACCTGCCTaGTGCAGTCAGAGCCGGCTCCTTCTTGAACTTGCTCTCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FRPVGPVGLETQQPA*CSQSRLLLELALEG Trigger: CCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTCTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 90 bp | GGCCCAGGGGACATTGGAGCCCACCAGAGGACACTTCTCTCCACTTaGGCAATAGACCTCTCCGCTAGCGCCCTGCTGTTTAATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGDIGAHQRTLLST*AIDLSASALLFNAL Trigger: CAAAGCATTAAACAGCAGGGCGCTAGCGGAGAGGTCTATTGCCCAAGTGGAGAGAAGTGTCCTCTGGTGGGCTCCAATGTCCCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTGGCTCCTTCTTGAACTaGCTCTCGAAGGGCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVYICLRERPVGPGSFLN*LSKGPE Trigger: CTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCC...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACAAGGCTTCCTTTTCCTaGCTGTCCTTGCAACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TTGGATEEEEHAALKAYNKASFS*LSLQLL Trigger: AAGCAGTTGCAAGGACAGCAAGGAAAAGGAAGCCTT...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATCTGCCTCAGAGAGAGACCTGTCGGACCTGGGGTGATGGGGATCTaGAGCCCTTCTGTGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVYICLRERPVGPGVMGI*SPSVEV Trigger: CACTTCCACAGAAGGGCTCAAGATCCCCATCACCCC...AGGTCCGACAGGTCTCTCTCTGAGGCAGATGTACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | ACCACCGGTGGGGCCACCGAGGAGGAGGAGCACGCAGCACTGAAAGCTTACAACCTGCTGTTTAATGCTTaGTCTGGAGCAAGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TTGGATEEEEHAALKAYNLLFNA*SGARET Trigger: TGTTTCCCTTGCTCCAGACAAAGCATTAAACAGCAG...GTTGTAAGCTTTCAGTGCTGCGTGCTCCTCCTCCTCGGTGGCCCCACCGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | AGCCAGGCTGTGAACAACACACAAACCATAGTAGACTTAGAAGCCATGATTGAGGGCGGCTCCTCCAGTTaGGAGAACCCGTTGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SQAVNNTQTIVDLEAMIEGGSSS*ENPLGT Trigger: GGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCC...CTCAATCATGGCTTCTAAGTCTACTATGGTTTGTGTGTTGTTCACAGCCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | CAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATAGTTTGGAGAACCCGTaGGGCACCAGGATGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSLKGGTLSKHLVARERYSLENP*GTRMPF Trigger: GAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACT...ATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | CAAAGTTTGAAAGGTGGCACACTTTCAAAACACCTGGTGGCCAGGGAAAGGTATAGAGCCGGCTCCTTCTaGAACTTGCTCTCGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSLKGGTLSKHLVARERYRAGSF*NLLSKG Trigger: GCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCT...ATACCTTTCCCTGGCCACCAGGTGTTTTGAAAGTGTGCCACCTTTCAAACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | CTTAGTATTTCAGACACACCTAAGGAAAAACTGCAGGCTTCCTCTACCCACACTACTGCTTTAGACCCGTaGGCCCCGTTGGCCTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSISDTPKEKLQASSTHTTALDP*APLASK Trigger: TTTCGAGGCCAACGGGGCCAACGGGTCTAAAGCAGT...AGTGTGGGTAGAGGAAGCCTGCAGTTTTTCCTTAGGTGTGTCTGAAATACTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGCTGCTGGACAGACTTCTGTTCAGCAGGATGGTTCTTTATTCTTGGTTTGGGGCCAAGCCTTCTTaGGTTCATAGAGGAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLDRLLFSRMVLYSWFGAKPS*VHRGGR Trigger: TCTCCCTCCTCTATGAACCAAAGAAGGCTTGGCCCC...AAACCAAGAATAAAGAACCATCCTGCTGAACAGAAGTCTGTCCAGCAGCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS-3UTR CAA 90 bp | CCACTACTGGTAGCTAATGACCTGATGTTGTTTACATTAAAAACAATCACTTCACAAGGGAAACAGAACTaGTGCGAAGGGACAGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLVANDLMLFTLKTITSQGKQN*CEGTDG Trigger: CCCGTCTGTCCCTTCGCACAAGTTCTGTTTCCCTTG...TGAAGTGATTGTTTTTAATGTAAACAACATCAGGTCATTAGCTACCAGTAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | GGCCGACAGTGGCGGTGGCTTGGCGGCTGCGGGCTGTaGACCGGTCGGGGAGCGGCCCTCCGGGAAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRQWRWLGGCGL*TGRGAALREAA Trigger: GGCTGCTTCCCGGAGGGCCGCTCCCCGACCGGTGCACAGCCCGCAGCCGCCAAGCCACCGCCACTGTCGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | GGCGGCGGCTGCAGCAGTAGGTCCTTGGCCGACAGTGGCGGTGGCTaGGCGGCTGCGGGCTGTGCACCGGTCGGGGAGCGGCCCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGCSSRSLADSGGG*AAAGCAPVGERPSG Trigger: CCCGGAGGGCCGCTCCCCGACCGGTGCACAGCCCGCAGCCGCCAAGCCACCGCCACTGTCGGCCAAGGACCTACTGCTGCAGCCGCCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | CACCCTCGGCGCTCAGCTCGCTGGCCCCGGCCGCGCTaGATAAGCTGTCGGCCGGACTCCGGTGCGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HPRRSARWPRPR*ISCRPDSGARA Trigger: AGCCCGCGCACCGGAGTCCGGCCGACAGCTTATCCAGCGCGGCCGGGGCCAGCGAGCTGAGCGCCGAGGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | TTGGGCACCAGGATGCCGTTCGCCGGCGCGGACTGCTaGGCGGCCGACTGTGGGAGGCCTGCACCCGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: LGTRMPFAGADC*AADCGRPAPAR Trigger: GCGTGCGGGTGCAGGCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | CCGTTGGGCACCAGGATGCCGTTCGCCGGCGCGGACTaGTGCGCGGCCGACTGTGGGAGGCCTGCACCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLGTRMPFAGAD*CAADCGRPAPA Trigger: TGCGGGTGCAGGCCTCCCACAGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | CCGCCGCGCTCGACACAGACGCCGGGCGTTTGTGGGTaGCCAACTCGGCGGGCTGAGCTCCCAGGCCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPRSTQTPGVCG*PTRRAELPGPV Trigger: CACCGGGCCTGGGAGCTCAGCCCGCCGAGTTGGGCACCCACAAACGCCCGGCGTCTGTGTCGAGCGCGGCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | GTGTCCCGCACCGTCTTAGGCCTGCTGGCCCAGTCCTaGTCCCCGGGCGCGCGGCCTTTGCCTGCACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSRTVLGLLAQS*SPGARPLPAPS Trigger: CGAGGGTGCAGGCAAAGGCCGCGCGCCCGGGGAGCAGGACTGGGCCAGCAGGCCTAAGACGGTGCGGGACAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | CTCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTaGGGCACCAGGATGCCGTTCGCCGGCGCGGACTGCTGCGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWRFSSGGSSSLENP*GTRMPFAGADCCAA Trigger: GGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | CGAGGGTTCGGGCTCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTaGGAGAACCCGTTGGGCACCAGGATGCCGTTCGCCGGCGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGFGLWRFSSGGSSS*ENPLGTRMPFAGAD Trigger: GTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCCCGAACCCTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS TCA 72 bp | CAGCACGGCCGCTCAACCCCAGCGCGGCAGAACCGTTaGCCAGAGGCACCAGAGTGGGCGGAACGGCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QHGRSTPARQNR*PEAPEWAERRV Trigger: CACACGCCGTTCCGCCCACTCTGGTGCCTCTGGTCAACGGTTCTGCCGCGCTGGGGTTGAGCGGCCGTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | GCTCCTCCAGTTTGGAGAACCCGTTGGGCACCAGGATaGCGTTCGCCGGCGCGGACTGCTGCGCGGCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: APPVWRTRWAPG*RSPARTAARPT Trigger: AGTCGGCCGCGCAGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | GGCGGAACGGCGTGTGCACGCCGAGGGTTCGGGCTCTaGCGATTCAGCTCCGGCGGCTCCTCCAGTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGTACARRGFGL*RFSSGGSSSLE Trigger: CTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCCCGAACCCTCGGCGTGCACACGCCGTTCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | GCAGCACGGCCGCTCAACCCCAGCGCGGCAGAACCGTaGACCAGAGGCACCAGAGTGGGCGGAACGGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AARPLNPSAAEP*TRGTRVGGTAC Trigger: ACACGCCGTTCCGCCCACTCTGGTGCCTCTGGTCAACGGTTCTGCCGCGCTGGGGTTGAGCGGCCGTGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | AACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTaGAGCGCCAGGAGCGTGTCCCGCACCGTCTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLLSKGPEWPCW*SARSVSRTVLG Trigger: GCCTAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | TCAGCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTTaGGCACCAGGATGCCGTTCGCCGGCGCGGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPAAPPVWRTR*APGCRSPARTA Trigger: AGCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CAA 72 bp | TTCAGCTCCGGCGGCTCCTCCAGTTTGGAGAACCCGTaGGGCACCAGGATGCCGTTCGCCGGCGCGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSGGSSSLENP*GTRMPFAGADC Trigger: GCAGTCCGCGCCGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS GCA 72 bp | TTCTTGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTaGTGGTGCAGCGCCAGGAGCGTGTCCCGCACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLNLLSKGPEWP*WCSARSVSRTV Trigger: GACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CCA 72 bp | GGCTCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTTaGAGAACCCGTTGGGCACCAGGATGCCGTTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSGDSAPAAPPV*RTRWAPGCRSP Trigger: CGGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
||
| CDS CAA 72 bp | GGGCTCTGGCGATTCAGCTCCGGCGGCTCCTCCAGTTaGGAGAACCCGTTGGGCACCAGGATGCCGTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLWRFSSGGSSS*ENPLGTRMPFA Trigger: GGCGAACGGCATCCTGGTGCCCAACGGGTTCTCCAAACTGGAGGAGCCGCCGGAGCTGAATCGCCAGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | CCCAACAACCTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTTGAACTaGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTGCAGCGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PNNLPAAVRAGSFLN*LSKGPEWPCWCSAR Trigger: CCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | TTGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTaGTGCAGCGCCAGGAGCGTGTCCCGCACCGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LNLLSKGPEWPC*CSARSVSRTVL Trigger: TAAGACGGTGCGGGACACGCTCCTGGCGCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | CTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTTGAACTaGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LPAAVRAGSFLN*LSKGPEWPCWC Trigger: GCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | TCGAAACCCAACAACCTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTaGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCTGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SKPNNLPAAVRAGSF*NLLSKGPEWPCWCS Trigger: GCTGCACCAGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS TCA 72 bp | ACAACCTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTTaGACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TTCLLQSEPAPS*TCSRRAPSGRA Trigger: AGCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | AGGGAGAGGGCGGGCTGCTGCTGTTCCTCCTGGTGGTaGAGTGAACCTGGGTGGCATCTTTTGAGGCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RERAGCCCSSWW*SEPGWHLLRRD Trigger: GTCACGCCTCAAAAGATGCCACCCAGGTTCACTCCACCACCAGGAGGAACAGCAGCAGCCCGCCCTCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | AACAACCTGCCTGCTGCAGTCAGAGCCGGCTCCTTCTaGAACTTGCTCTCGAAGGGCCCCGAGTGGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: NNLPAAVRAGSF*NLLSKGPEWPC Trigger: GCACGGCCACTCGGGGCCCTTCGAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | GGCCCCGTTGGCCTCGAAACCCAACAACCTGCCTGCTaGAGTCAGAGCCGGCTCCTTCTTGAACTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GPVGLETQQPAC*SQSRLLLELAL Trigger: GAGAGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS TCA 72 bp | AACTTGTGCGAAGGGACAGACGGGCACTGCACAAAGTaGGTATCCTCCAGCCGCTCGTGGCAGAGGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: NLCEGTDGHCTK*VSSSRSWQRVQ Trigger: CTGCACCCTCTGCCACGAGCGGCTGGAGGATACTCACTTTGTGCAGTGCCCGTCTGTCCCTTCGCACAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS GCA 72 bp | GTTGGCCCCGTTGGCCTCGAAACCCAACAACCTGCCTaGTGCAGTCAGAGCCGGCTCCTTCTTGAACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VGPVGLETQQPA*CSQSRLLLELA Trigger: AGCAAGTTCAAGAAGGAGCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | TTGTCTGCTACTAAAATCAGGGCTGCCATTGGGGACTaGCCATTCTGGGCCGCTTCAGGCGGTGTGGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSATKIRAAIGD*PFWAASGGVVR Trigger: CCGGACCACACCGCCTGAAGCGGCCCAGAATGGCCAGTCCCCAATGGCAGCCCTGATTTTAGTAGCAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | GCTGTCCTTGCAACTGCTTTAGACCCGTTGGCCCCGTaGGCCTCGAAACCCAACAACCTGCCTGCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: AVLATALDPLAP*ASKPNNLPAAV Trigger: GACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTCTAAAGCAGTTGCAAGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 90 bp | CTTTTCCTTGCTGTCCTTGCAACTGCTTTAGACCCGTTGGCCCCGTaGGCCTCGAAACCCAACAACCTGCCTGCTGCAGTCAGAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LFLAVLATALDPLAP*ASKPNNLPAAVRAG Trigger: GCCGGCTCTGACTGCAGCAGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTCTAAAGCAGTTGCAAGGACAGCAAGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CCA 72 bp | GACATTGGAGCCCACCAGAGGACACTTCTCTCCACTTaGGCAATAGACCTCTCCGCTAGCGCCCTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: DIGAHQRTLLST*AIDLSASALLF Trigger: AAACAGCAGGGCGCTAGCGGAGAGGTCTATTGCCCAAGTGGAGAGAAGTGTCCTCTGGTGGGCTCCAATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | TCTGTGGAAGTGGACAGCCAAGGCTGTGTCTCACCATaGATCTTAGGGGGCCCGACTTCCCCTTCCGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SVEVDSQGCVSP*ILGGPTSPSGS Trigger: AGAACCGGAAGGGGAAGTCGGGCCCCCTAAGATCAATGGTGAGACACAGCCTTGGCTGTCCACTTCCACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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| CDS CAA 72 bp | CTTTTCCTTGCTGTCCTTGCAACTGCTTTAGACCCGTaGGCCCCGTTGGCCTCGAAACCCAACAACCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LFLAVLATALDP*APLASKPNNLP Trigger: AGGCAGGTTGTTGGGTTTCGAGGCCAACGGGGCCAACGGGTCTAAAGCAGTTGCAAGGACAGCAAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054960.9 |
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