Pregenerated sensors for IRF2BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044030Ensembl transcript IDs: ENSMUST00000053713.5
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTaGGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCAGCATCTCAT | + |
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Preference number: 1 (lower is better) Translates to: LDKRHHLVVTTQKSS*AQDKSNPEGGAASH Trigger: ATGAGATGCTGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| 3UTR CAA 90 bp | ACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTaGCGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCAGCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: TGQKAPPSGHNAEVL*RAGQVQSRRGRSIS Trigger: TGAGATGCTGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCCCCAGGGGACCCATCTaGGCAGAGGAAAGGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: VLRRSLLKDTRGTSHPTTPRGPI*AEERVY Trigger: ATATACCCTTTCCTCTGCCCAGATGGGTCCCCTGGG...GGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCACATCTCTCAGTTTATTaGAGGAGGAAAAGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TGQKAPPSGHNAEVLLRAHLSVY*RRKRVG Trigger: TCCCACCCTTTTCCTCCTTCAATAAACTGAGAGATG...TGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| 3UTR GCA 72 bp | AGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTaGGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCA | + |
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Preference number: 3 (lower is better) Translates to: RHHLVVTTQKSS*AQDKSNPEGGA Trigger: TGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | CAGAAGTCCTCTTGCGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCAGCATCTGCCTTGGGACGCCCATaGCACTCCTCCGCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QKSSCAQDKSNPEGGAASALGRP*HSSARP Trigger: GGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGC...AGATGCTGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GGAGGGGCCCAGGAACCCCAAACACCCTCTCTGACAGGAGCCACAAGCTCTCTCCCCTCGGGGAGCACGTaGCTGCGCTTGAGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GGAQEPQTPSLTGATSSLPSGST*LRLSWR Trigger: CCGCCAGCTCAAGCGCAGCCACGTGCTCCCCGAGGG...GAGAGAGCTTGTGGCTCCTGTCAGAGAGGGTGTTTGGGGTTCCTGGGCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGGCGGGCGGCGTCGATaGGCAGCTCGATGCGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: EVPSQGHAGYLSPNYQQQGGRRR*AARCGP Trigger: CGGACCGCATCGAGCTGCTCATCGACGCCGCCCGCC...CTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGAGCACGTGGCTGCGCTTaGGCTGGCGGGCGGCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: GQKAPPSGHNAEVLLRAGARGCA*AGGRRR Trigger: TCGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGC...TCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | TCCGCAGATGCGGTGATGGTTAAGGGGGAGGGGAAAGAAGCCTGGCAGTGGCAGCCTGGCGCCACCCAGTaGCGCTGTTGCTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SADAVMVKGEGKEAWQWQPGATQ*RCCCSS Trigger: GGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGG...CTGCCACTGCCAGGCTTCTTTCCCCTCCCCCTTAACCATCACCGCATCTGCGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | ACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCACCCGATGGCTGCGCCTaGGCCTGCGGGGGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TGQKAPPSGHNAEVLLRAPDGCA*ACGGGN Trigger: GTTGCCACCCCCGCAGGCCCAGGCGCAGCCATCGGG...TGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGAGCAGGGGCCGGTTCTaGGTACTGCTGGGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: EVPSQGHAGYLSPNYQQQSRGRF*VLLGQG Trigger: GCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCT...CTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | TCCGCAGATGCGGTGATGGTTAAGGGGGAGGGGAAAGAAGCCTGGCAGTGGCAGTGCGACGGCGTGGAGTaGGCGCCAGGTTTCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SADAVMVKGEGKEAWQWQCDGVE*APGFGM Trigger: CATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCA...CTGCCACTGCCAGGCTTCTTTCCCCTCCCCCTTAACCATCACCGCATCTGCGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | CAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACAACGCTACCACCCCCGCTaGCAGCTTCAGCCCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QKAPPSGHNAEVLLRAGQRYHPR*QLQPRQ Trigger: CTGCCGGGGCTGAAGCTGTCAGCGGGGGTGGTAGCG...TTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | ACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGGGCTAGCACCCCCTaGGCGGACAGAGCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TGQKAPPSGHNAEVLLRAGASTP*ADRAST Trigger: GGTGGAGGCTCTGTCCGCGCAGGGGGTGCTAGCCCC...TGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCATGGCTGCGCTTGAGCTaGCGGGCGGCGTCGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPWLRLS*RAASMS Trigger: GCTCATCGACGCCGCCCGCCAGCTCAAGCGCAGCCA...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGACCGGAGGGCGGGCAGTaGCATCAAAGGCGAACACCC | + |
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Preference number: 4 (lower is better) Translates to: GPFSRTRGVPLTQLPTAGPEGGQ*HQRRTP Trigger: GGGTGTTCGCCTTTGATGCCACTGCCCGCCCTCCGG...TCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGAGGGGCCCAGGAACCCCAAACACCCTCTCTGACAGGAGCCACAAGCGGGTCCTTGGGTGAGTaGCCCAGAGCCTCGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: KKGGAQEPQTPSLTGATSGSLGE*PRASAT Trigger: TGTGGCCGAGGCTCTGGGCCACTCACCCAAGGACCC...GCTTGTGGCTCCTGTCAGAGAGGGTGTTTGGGGTTCCTGGGCCCCTCCTTTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGACCCCACCAGGGTCCTTaGGTGAGTGGCCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GPFSRTRGVPLTQLPTAGPHQGP*VSGPEP Trigger: AGGCTCTGGGCCACTCACCCAAGGACCCTGGTGGGG...TCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | AGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACTCCAAGGCCAGACACTaGAGCTGCCAGCAGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSQEVPSQGHAGYLSPNYSKARH*SCQQPG Trigger: CCCGGGCTGCTGGCAGCTGCAGTGTCTGGCCTTGGA...GTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACAAGCCGGTTCTGGGTACTaGTGGGGCAGGGCCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QKAPPSGHNAEVLLRAGQAGSGY*WGRASA Trigger: TGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGC...TTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| 3UTR CAA 72 bp | AAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTaGCGCGCAGGACAAGTCCAATCCCGAAGGGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KAPPSGHNAEVL*RAGQVQSRRGR Trigger: GCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | ACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGACCAGGGTCCTTGGGTaGGTGGCCCAGAGCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: TNSSPLDKRHHLVVTTQKTRVLG*VAQSLG Trigger: GCCGAGGCTCTGGGCCACTCACCCAAGGACCCTGGT...CTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | ACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCACCCCGGCAGTGGGGCTaGCTTCTGCCTCTCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: TGQKAPPSGHNAEVLLRAPRQWG*LLPLHC Trigger: GCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGGG...TGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGAAGCCCTGGGAGCCCGTaGAGGCTAGGTCCTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQKAPPSGHNAEVLLRAGSPGSP*RLGPWK Trigger: CTTCCAAGGACCTAGCCTCCACGGGCTCCCAGGGCT...TCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AGCCCACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGGTTCTGGGTACTGCTaGGGCAGGGCCTCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPLDKRHHLVVTTQKSSCGSGYC*GRASAG Trigger: TCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACC...GCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GAGCACAGCAAATGTACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCTGGAAGTCGGGTGCTTaGGAGCCGGGGGTCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: EHSKCTLLQTAAHWTKGTWKSGA*EPGVRA Trigger: CGCCCGGACCCCCGGCTCTCAAGCACCCGACTTCCA...GGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTACATTTGCTGTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | AGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCATACTCGAGGTACTTaGAGCCCGATGAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SSQEVPSQGHAGYLSPNYHTRGT*SPMRPG Trigger: CCCTGGCCTCATCGGGCTTCAAGTACCTCGAGTATG...GTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACAAACCCAGTGCCGCTGTTaGTGCTCCTCCGTGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: QKAPPSGHNAEVLLRAGQTQCRC*CSSVVI Trigger: GATGACCACGGAGGAGCAGCAACAGCGGCACTGGGT...TTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAGGTACCGAGGGACACTaGACGAAGTGGGTGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPGTEGH*TKWVSS Trigger: GGAAGACACCCACTTCGTGCAGTGTCCCTCGGTACC...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAGCATCAAGCTGGGGATaGAGCCAAGCAAAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPASSWG*SQAKPC Trigger: GCAGGGCTTTGCTTGGCTCCATCCCCAGCTTGATGC...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | TTCGTTTATAAAGAGCGAGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTAGAGTATGGACCGCCTaGCGCCACCCAGTGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FVYKERVLRRSLLKDTRGRVWTA*RHPVPL Trigger: CAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCT...ACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACTCGCTCTTTATAAACGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | CAGAAGTCCTCTTGCGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCAGCATCTTCCGCATTCCTCTGCTaGTTCTCCTTCTCGAAATCG | + |
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Preference number: 4 (lower is better) Translates to: QKSSCAQDKSNPEGGAASSAFLC*FSFSKS Trigger: CGATTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGA...AGATGCTGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGAGGACTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | AGCCCACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCCAGTGCCGCTGTTGCTaGTCCTCCGTGGTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SPLDKRHHLVVTTQKSSCQCRCC*SSVVIF Trigger: GAAGATGACCACGGAGGAGCAGCAACAGCGGCACTG...GCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | GAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGCTTCTGCCTCTCCATTaGGTGCCACCAAACGATGCT | + |
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Preference number: 4 (lower is better) Translates to: EVPSQGHAGYLSPNYQQQLLPLH*VPPNDA Trigger: AGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAG...CTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GCAAATGTACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTCCGCCCGGCCCCGCATaGCCTCGTTCAGTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ANVHYYKQQPTGQKAPPSPPGPA*PRSVLP Trigger: TGGCAGAACTGAACGAGGCCATGCGGGGCCGGGCGG...ACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTACATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | TACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTGGTCACAACGCAGAATGCTTTGCGACGGCGTaGAGTGGGCGCCAGGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: YKQQPTGQKAPPSGHNAECFATA*SGRQVS Trigger: CGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCA...TTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAGTTGCTGCTCCTCCGTaGTCATCTTCCCAGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPVAAPP*SSSQLS Trigger: AGACAGCTGGGAAGATGACCACGGAGGAGCAGCAAC...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAGACATTTGTCTCCACTaGGGCAGTACACCTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPDICLH*GSTPLR Trigger: CCGGAGAGGTGTACTGCCCCAGTGGAGACAAATGTC...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GCAAATGTACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTGGCACACAGCCTCGCTaGAGTCCCACACCATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ANVHYYKQQPTGQKAPPSGTQPR*SPTPWP Trigger: GGGCCATGGTGTGGGACTTCAGCGAGGCTGTGTGCC...ACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTACATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | AGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCACAGGGGTATTCGGTaGAGAGCTTCAGCTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: SSQEVPSQGHAGYLSPNYHRGIR*RASART Trigger: AGTTCGAGCTGAAGCTCTTCACCGAATACCCCTGTG...GTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGTCTCGAAGAGCATCATaGAACATCTGGCGAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: EVPSQGHAGYLSPNYQQQSRRAS*NIWRAT Trigger: AGTGGCTCGCCAGATGTTTCATGATGCTCTTCGAGA...CTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | GCAAATGTACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTAGCCAAGCAAAGCCCTaGGTGCCCCTTCCGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: ANVHYYKQQPTGQKAPPSSQAKP*VPLPPR Trigger: CCGTGGCGGAAGGGGCACGCAGGGCTTTGCTTGGCT...ACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTACATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | GGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACCCCCGCGTAAACATTaGCAGAACCACAGGGGTATT | + |
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Preference number: 4 (lower is better) Translates to: GQKAPPSGHNAEVLLRAGPPRKH*QNHRGI Trigger: AATACCCCTGTGGTTCTGGCAATGTTTACGCGGGGG...TCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | GGGAATAATTTATCCGCAGATGCGGTGATGGTTAAGGGGGAGGGGAAAGAAGCCCATCTGGCGAGCCACTaGAAGGACCCCCGCGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: GNNLSADAVMVKGEGKEAHLASH*KDPRVN Trigger: GTTTACGCGGGGGTCCTTGCAGTGGCTCGCCAGATG...GGCTTCTTTCCCCTCCCCCTTAACCATCACCGCATCTGCGGATAAATTATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | GGACAAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGAAGAGGAACCCACCAGTaGACATTTGTCTCCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQKAPPSGHNAEVLLRAGRGTHQ*TFVSTG Trigger: CCCAGTGGAGACAAATGTCCACTGGTGGGTTCCTCT...TCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR TCA 90 bp | GCAAATGTACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTGAGGGCAGCAATAGGTaGGGGCACACCAGGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ANVHYYKQQPTGQKAPPSEGSNR*GHTRGL Trigger: GAGACCCCTGGTGTGCCCTCACCTATTGCTGCCCTC...ACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTACATTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | AAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACAAGCAGTCCGCATTCCTCTaGTGCTTCTCCTTCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: KRHHLVVTTQKSSCAQDKQSAFL*CFSFSK Trigger: TTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGACTG...CTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR GCA 90 bp | TTCGTTTATAAAGAGCGAGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTGGCCTCGTTCAGTTCTaGCAAGCAGTCCGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: FVYKERVLRRSLLKDTRGGLVQF*QAVRIP Trigger: AGGAATGCGGACTGCTTGGCAGAACTGAACGAGGCC...ACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACTCGCTCTTTATAAACGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CCA 90 bp | TACACTACTACAAACAGCAGCCCACTGGACAAAAGGCACCACCTAGTGGTCACAGTTCCCTTACAGCCTTaGGACGCCCATGCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: YTTTNSSPLDKRHHLVVTVPLQP*DAHATP Trigger: AGGAGTGGCATGGGCGTCCCAAGGCTGTAAGGGAAC...TGTGACCACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | GGTCCGGGCGAGCGGCCCTCGGGGAGCACGTGGCTGCGCTTGAGCTaGCGGGCGGCGTCGATGAGCAGCTCGATGCGGTCCGCGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GPGERPSGSTWLRLS*RAASMSSSMRSAPS Trigger: CGAGGGCGCGGACCGCATCGAGCTGCTCATCGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGCTCCCCGAGGGCCGCTCGCCCGGACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CCGCCGGTCCCCGATGGCTGCGCCTGGGCCTGCGGGGGTGGCAACTaGGAGCCCTGGGAGCCCGTGGAGGCTAGGTCCTTGGAAGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: PPVPDGCAWACGGGN*EPWEPVEARSLEVG Trigger: CCCGACTTCCAAGGACCTAGCCTCCACGGGCTCCCAGGGCTCCCAGTTGCCACCCCCGCAGGCCCAGGCGCAGCCATCGGGGACCGGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CCCTGCGTGCCCCTTCCGCCACGGCCTCCTCGCGGCCCAGCCCGTTaGCCAAGCGGGACCCCAGGGTGTACTCCAAAGCCGGCGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PCVPLPPRPPRGPAR*PSGTPGCTPKPAKA Trigger: TGCCTTCGCCGGCTTTGGAGTACACCCTGGGGTCCCGCTTGGCCAACGGGCTGGGCCGCGAGGAGGCCGTGGCGGAAGGGGCACGCAGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | GGAGGTGGGCCACACAGAGCAGCAGGGGCCGGTTCTGGGTACTGCTaGGGCAGGGCCTCCGCAGGAGCAGGCTCTCGGAAGCTGCGGACC | + |
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Preference number: 5 (lower is better) Translates to: GGGPHRAAGAGSGYC*GRASAGAGSRKLRT Trigger: GGTCCGCAGCTTCCGAGAGCCTGCTCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCTGCTCTGTGTGGCCCACCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | CTTGGAGGTGGGCCACACAGAGCAGCAGGGGCCGGTTCTGGGTACTaGTGGGGCAGGGCCTCCGCAGGAGCAGGCTCTCGGAAGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LGGGPHRAAGAGSGY*WGRASAGAGSRKLR Trigger: CCGCAGCTTCCGAGAGCCTGCTCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCTGCTCTGTGTGGCCCACCTCCAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CCCGATGGCTGCGCCTGGGCCTGCGGGGGTGGCAACTGGGAGCCCTaGGAGCCCGTGGAGGCTAGGTCCTTGGAAGTCGGGTGCTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PDGCAWACGGGNWEP*EPVEARSLEVGCLR Trigger: TCTCAAGCACCCGACTTCCAAGGACCTAGCCTCCACGGGCTCCCAGGGCTCCCAGTTGCCACCCCCGCAGGCCCAGGCGCAGCCATCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTTTGCGACGGCGTaGAGTGGGCGCCAGGTTTCGGGATGGGGCTCTTGGAGGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PSCLALGLRGCFATA*SGRQVSGWGSWRWA Trigger: GGCCCACCTCCAAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | CTCCGTGGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATaGTTTGCGACGGCGTGGAGTGGGCGCCAGGTTTCGGGATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LRGHLPSCLALGLRG*FATAWSGRQVSGWG Trigger: GCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCACGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | AAGGGGCACAGGCGGACAGAGCCAGTAGCTGTTCCCTTACAGCCTTaGGACGCCCATGCCACTCCTCCGCCCGGCCCCGCATGGCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: KGHRRTEPVAVPLQP*DAHATPPPGPAWPR Trigger: ACGAGGCCATGCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGCTGTAAGGGAACAGCTACTGGCTCTGTCCGCCTGTGCCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CTGTCTCGCCCTCGGGCTCAGGGGATGCTTTGCGACGGCGTGGAGTaGGCGCCAGGTTTCGGGATGGGGCTCTTGGAGGTGGGCCACACA | + |
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Preference number: 5 (lower is better) Translates to: LSRPRAQGMLCDGVE*APGFGMGLLEVGHT Trigger: TGTGTGGCCCACCTCCAAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | GCGGACAGAGCCAGTAGCTGTTCCCTTACAGCCTTGGGACGCCCATaGCACTCCTCCGCCCGGCCCCGCATGGCCTCGTTCAGTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ADRASSCSLTALGRP*HSSARPRMASFSSA Trigger: GGCAGAACTGAACGAGGCCATGCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGCTGTAAGGGAACAGCTACTGGCTCTGTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | ATGGACCGCCTGGCGCCACCCAGTGCCGCTGTTGCTGCTCCTCCGTaGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: MDRLAPPSAAVAAPP*SSSQLSRPRAQGML Trigger: AAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | TCTGCCTCTCCATTGCGTGCCACCAAACGATGCTGGGCCGGTGGTTaGGTTGTGGAGGAAGCCGCGGGGCTAGCACCCCCTGCGCGGACA | + |
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Preference number: 5 (lower is better) Translates to: SASPLRATKRCWAGG*VVEEAAGLAPPART Trigger: TGTCCGCGCAGGGGGTGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | GACTTCTGCCTCTCCATTGCGTGCCACCAAACGATGCTGGGCCGGTaGTTGGGTTGTGGAGGAAGCCGCGGGGCTAGCACCCCCTGCGCG | + |
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Preference number: 5 (lower is better) Translates to: DFCLSIACHQTMLGR*LGCGGSRGASTPCA Trigger: CGCGCAGGGGGTGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | TGGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTTTaGGACGGCGTGGAGTGGGCGCCAGGTTTCGGGATGGGGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: WSSSQLSRPRAQGML*DGVEWAPGFGMGLL Trigger: CAAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | GTCTCTGAAGAGTATGGACCGCCTGGCGCCACCCAGTGCCGCTGTTaGTGCTCCTCCGTGGTCATCTTCCCAGCTGTCTCGCCCTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: VSEEYGPPGATQCRC*CSSVVIFPAVSPSG Trigger: GCCCGAGGGCGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCTTCAGAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | GTGGGGCTGACTTCTGCCTCTCCATTGCGTGCCACCAAACGATGCTaGGCCGGTGGTTGGGTTGTGGAGGAAGCCGCGGGGCTAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: VGLTSASPLRATKRC*AGGWVVEEAAGLAP Trigger: GGGTGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | GTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAGCACGTGGCTGCGCTaGAGCTGGCGGGCGGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: VLRRSLLKDTRGTSHPTTSTWLR*SWRAAS Trigger: CGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGCT...GGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | TCTGAAGAGTATGGACCGCCTGGCGCCACCCAGTGCCGCTGTTGCTaGTCCTCCGTGGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SEEYGPPGATQCRCC*SSVVIFPAVSPSGS Trigger: TGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCTTCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | GCAGTGGGGCTGACTTCTGCCTCTCCATTGCGTGCCACCAAACGATaGTGGGCCGGTGGTTGGGTTGTGGAGGAAGCCGCGGGGCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: AVGLTSASPLRATKR*WAGGWVVEEAAGLA Trigger: TGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | TTACAGCCTTGGGACGCCCATGCCACTCCTCCGCCCGGCCCCGCATaGCCTCGTTCAGTTCTGCCAAGCAGTCCGCATTCCTCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LQPWDAHATPPPGPA*PRSVLPSSPHSSAA Trigger: AGCAGCAGAGGAATGCGGACTGCTTGGCAGAACTGAACGAGGCCATGCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGCTGTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAGGGCCGGTGGTTGGGTaGTGGAGGAAGCCGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPGPVVG*WRKPRG Trigger: GCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCC...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | ACACCAGGGGTCTCTGAAGAGTATGGACCGCCTGGCGCCACCCAGTaGCGCTGTTGCTGCTCCTCCGTGGTCATCTTCCCAGCTGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: TPGVSEEYGPPGATQ*RCCCSSVVIFPAVS Trigger: CGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCTTCAGAGACCCCTGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | AGCTTCAGCCCCGGCAGTGGGGCTGACTTCTGCCTCTCCATTGCGTaGCACCAAACGATGCTGGGCCGGTGGTTGGGTTGTGGAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SFSPGSGADFCLSIA*HQTMLGRWLGCGGS Trigger: GCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGGGCTGAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | TTCGTTTATAAAGAGCGAGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTTCGCGGCCCAGCCCGTaGGCCAAGCGGGACCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FVYKERVLRRSLLKDTRGSRPSP*AKRDPR Trigger: CCTGGGGTCCCGCTTGGCCAACGGGCTGGGCCGCGA...ACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACTCGCTCTTTATAAACGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | GAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGATGCTGGGCCGGTGGTaGGGTTGTGGAGGAAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: EVPSQGHAGYLSPNYQQQMLGRW*GCGGSR Trigger: GCGGCTTCCTCCACAACCCAACCACCGGCCCAGCAT...CTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 90 bp | GGCGCCATTCCCCTGAACCATGGCGCCGTTCATACTCGAGGTACTTaGAGCCCGATGAGGCCAGGGCCTTCCCTGGCTCTCGAAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GAIPLNHGAVHTRGT*SPMRPGPSLALEEH Trigger: ATGCTCTTCGAGAGCCAGGGAAGGCCCTGGCCTCATCGGGCTTCAAGTACCTCGAGTATGAACGGCGCCATGGTTCAGGGGAATGGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | GGCTCTCGGAAGCTGCGGACCCCATCCGTAAGCAGCTCTCCTAACTaGCGCCATTCCCCTGAACCATGGCGCCGTTCATACTCGAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: GSRKLRTPSVSSSPN*RHSPEPWRRSYSRY Trigger: GTACCTCGAGTATGAACGGCGCCATGGTTCAGGGGAATGGCGCCAGTTAGGAGAGCTGCTTACGGATGGGGTCCGCAGCTTCCGAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 90 bp | CAAGGACCCCCGCGTAAACATTGCCAGAACCACAGGGGTATTCGGTaGAGAGCTTCAGCTCGAACTCATAGCCCGGAGGGCGGGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: QGPPRKHCQNHRGIR*RASARTHSPEGGQW Trigger: CCACTGCCCGCCCTCCGGGCTATGAGTTCGAGCTGAAGCTCTTCACCGAATACCCCTGTGGTTCTGGCAATGTTTACGCGGGGGTCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCACACCCAGTGCCGCTGTaGCTGCTCCTCCGTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPHPVPL*LLLRGH Trigger: ATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTG...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | CGCATGGCCTCGTTCAGTTCTGCCAAGCAGTCCGCATTCCTCTGCTaGTTCTCCTTCTCGAAATCGGAGCCGAAAAGTGGACGAGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RMASFSSAKQSAFLC*FSFSKSEPKSGRAG Trigger: CCCCGCTCGTCCACTTTTCGGCTCCGATTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGACTGCTTGGCAGAACTGAACGAGGCCATGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | CCCCGCATGGCCTCGTTCAGTTCTGCCAAGCAGTCCGCATTCCTCTaGTGCTTCTCCTTCTCGAAATCGGAGCCGAAAAGTGGACGAGCG | + |
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Preference number: 5 (lower is better) Translates to: PRMASFSSAKQSAFL*CFSFSKSEPKSGRA Trigger: CGCTCGTCCACTTTTCGGCTCCGATTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGACTGCTTGGCAGAACTGAACGAGGCCATGCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AGTTCTCAGGAGGTCCCTTCTCAAGGACACGCGGGGTACCTCTCACCCAACTACGCCTCGGCCACATTCTaGAGGGCAGCAATAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSQEVPSQGHAGYLSPNYASATF*RAAIGE Trigger: CTCACCTATTGCTGCCCTCAAGAATGTGGCCGAGGC...GTAGTTGGGTGAGAGGTACCCCGCGTGTCCTTGAGAAGGGACCTCCTGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGAGGGGCCCAGGAACCCCAAACACCCTCTCTGACAGGAGCCACAAGCCAAGGAAAGCAGAACTaGTGTCCGGGTACCGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: KKGGAQEPQTPSLTGATSQGKQN*CPGTEG Trigger: TCCCTCGGTACCCGGACACAAGTTCTGCTTTCCTTG...GCTTGTGGCTCCTGTCAGAGAGGGTGTTTGGGGTTCCTGGGCCCCTCCTTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 90 bp | CACCAGTGGACATTTGTCTCCACTGGGGCAGTACACCTCTCCGGCTaGGCCCTGTGCCTTGATAAACTCTCGGGAGCAAGGAAAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HQWTFVSTGAVHLSG*ALCLDKLSGARKAE Trigger: TTCTGCTTTCCTTGCTCCCGAGAGTTTATCAAGGCACAGGGCCCAGCCGGAGAGGTGTACTGCCCCAGTGGAGACAAATGTCCACTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AAAAGGCACCACCTAGTGGTCACAACGCAGAAGTCCTCTTGCGCGCAGGACAAGGTGGAGGCTAGGTCCTaGGAAGTCGGGTGCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRHHLVVTTQKSSCAQDKVEARS*EVGCLR Trigger: TCTCAAGCACCCGACTTCCAAGGACCTAGCCTCCAC...CTTGTCCTGCGCGCAAGAGGACTTCTGCGTTGTGACCACTAGGTGGTGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 90 bp | CTTCCCTGGCTCTCGAAGAGCATCATGAAACATCTGGCGAGCCACTaGAAGGACCCCCGCGTAAACATTGCCAGAACCACAGGGGTATTC | + |
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Preference number: 5 (lower is better) Translates to: LPWLSKSIMKHLASH*KDPRVNIARTTGVF Trigger: GAATACCCCTGTGGTTCTGGCAATGTTTACGCGGGGGTCCTTGCAGTGGCTCGCCAGATGTTTCATGATGCTCTTCGAGAGCCAGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | AAGGACACGCGGGGTACCTCTCACCCAACTACCAACAGCAGGAAAGCCAAGCCAAGCCCGTGGTCCTTCTaGAATCGAACATTGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KDTRGTSHPTTNSRKAKPSPWSF*NRTLKG Trigger: CCCTTTCAATGTTCGATTCAAGAAGGACCACGGGCT...TGGCTTGGCTTTCCTGCTGTTGGTAGTTGGGTGAGAGGTACCCCGCGTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS-3UTR CAA 90 bp | TCTTGCGCGCAGGACAAGTCCAATCCCGAAGGGGGCGCAGCATCTCATAAAAACCTTTCTTTCTTGACCTaGATGTCACCAGCAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: SCAQDKSNPEGGAASHKNLSFLT*MSPARI Trigger: TATTCTTGCTGGTGACATCAAGGTCAAGAAAGAAAG...GTTTTTATGAGATGCTGCGCCCCCTTCGGGATTGGACTTGTCCTGCGCGCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | GCCGGGGGTCCGGGCGAGCGGCCCTCGGGGAGCACGTGGCTGCGCTaGAGCTGGCGGGCGGCGTCGATGAGCAGCTCGATGCGGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGGPGERPSGSTWLR*SWRAASMSSSMRSA Trigger: CGCGGACCGCATCGAGCTGCTCATCGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGCTCCCCGAGGGCCGCTCGCCCGGACCCCCGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | CCGGGCGAGCGGCCCTCGGGGAGCACGTGGCTGCGCTaGAGCTGGCGGGCGGCGTCGATGAGCAGCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: PGERPSGSTWLR*SWRAASMSSSM Trigger: CATCGAGCTGCTCATCGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGCTCCCCGAGGGCCGCTCGCCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | GCCCTGCGTGCCCCTTCCGCCACGGCCTCCTCGCGGCCCAGCCCGTaGGCCAAGCGGGACCCCAGGGTGTACTCCAAAGCCGGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALRAPSATASSRPSP*AKRDPRVYSKAGEG Trigger: GCCTTCGCCGGCTTTGGAGTACACCCTGGGGTCCCGCTTGGCCAACGGGCTGGGCCGCGAGGAGGCCGTGGCGGAAGGGGCACGCAGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | GAGCGGCCCTCGGGGAGCACGTGGCTGCGCTTGAGCTaGCGGGCGGCGTCGATGAGCAGCTCGATGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ERPSGSTWLRLS*RAASMSSSMRS Trigger: GGACCGCATCGAGCTGCTCATCGACGCCGCCCGCCAGCTCAAGCGCAGCCACGTGCTCCCCGAGGGCCGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | CCCCTTCCGCCACGGCCTCCTCGCGGCCCAGCCCGTTaGCCAAGCGGGACCCCAGGGTGTACTCCAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: PLPPRPPRGPAR*PSGTPGCTPKP Trigger: CGGCTTTGGAGTACACCCTGGGGTCCCGCTTGGCCAACGGGCTGGGCCGCGAGGAGGCCGTGGCGGAAGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | GCCCCTTCCGCCACGGCCTCCTCGCGGCCCAGCCCGTaGGCCAAGCGGGACCCCAGGGTGTACTCCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: APSATASSRPSP*AKRDPRVYSKA Trigger: GGCTTTGGAGTACACCCTGGGGTCCCGCTTGGCCAACGGGCTGGGCCGCGAGGAGGCCGTGGCGGAAGGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | GGGGGTGGCAACTGGGAGCCCTGGGAGCCCGTGGAGGCTAGGTCCTaGGAAGTCGGGTGCTTGAGAGCCGGGGGTCCGGGCGAGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GGGNWEPWEPVEARS*EVGCLRAGGPGERP Trigger: GGGCCGCTCGCCCGGACCCCCGGCTCTCAAGCACCCGACTTCCAAGGACCTAGCCTCCACGGGCTCCCAGGGCTCCCAGTTGCCACCCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | TGGGAGCCCGTGGAGGCTAGGTCCTTGGAAGTCGGGTaGTTGAGAGCCGGGGGTCCGGGCGAGCGGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: WEPVEARSLEVG*LRAGGPGERPS Trigger: CGAGGGCCGCTCGCCCGGACCCCCGGCTCTCAAGCACCCGACTTCCAAGGACCTAGCCTCCACGGGCTCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | GGGCCACACAGAGCAGCAGGGGCCGGTTCTGGGTACTaGTGGGGCAGGGCCTCCGCAGGAGCAGGCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GPHRAAGAGSGY*WGRASAGAGSR Trigger: CCGAGAGCCTGCTCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCTGCTCTGTGTGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | TGGAGGTGGGCCACACAGAGCAGCAGGGGCCGGTTCTaGGTACTGCTGGGGCAGGGCCTCCGCAGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: WRWATQSSRGRF*VLLGQGLRRSR Trigger: CCTGCTCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCTGCTCTGTGTGGCCCACCTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | CCACACAGAGCAGCAGGGGCCGGTTCTGGGTACTGCTaGGGCAGGGCCTCCGCAGGAGCAGGCTCTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PHRAAGAGSGYC*GRASAGAGSRK Trigger: CTTCCGAGAGCCTGCTCCTGCGGAGGCCCTGCCCCAGCAGTACCCAGAACCGGCCCCTGCTGCTCTGTGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | CTCGCCCTCGGGCTCAGGGGATGCTTTGCGACGGCGTaGAGTGGGCGCCAGGTTTCGGGATGGGGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LALGLRGCFATA*SGRQVSGWGSW Trigger: CCAAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | AACTGGGAGCCCTGGGAGCCCGTGGAGGCTAGGTCCTaGGAAGTCGGGTGCTTGAGAGCCGGGGGTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: NWEPWEPVEARS*EVGCLRAGGPG Trigger: GCCCGGACCCCCGGCTCTCAAGCACCCGACTTCCAAGGACCTAGCCTCCACGGGCTCCCAGGGCTCCCAGTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | CAGGCGGACAGAGCCAGTAGCTGTTCCCTTACAGCCTaGGGACGCCCATGCCACTCCTCCGCCCGGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QADRASSCSLTA*GRPCHSSARPR Trigger: GCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGCTGTAAGGGAACAGCTACTGGCTCTGTCCGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | AAAGGGGCACAGGCGGACAGAGCCAGTAGCTGTTCCCTTACAGCCTaGGGACGCCCATGCCACTCCTCCGCCCGGCCCCGCATGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: KGAQADRASSCSLTA*GRPCHSSARPRMAS Trigger: CGAGGCCATGCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCAAGGCTGTAAGGGAACAGCTACTGGCTCTGTCCGCCTGTGCCCCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | TCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTTTaGGACGGCGTGGAGTGGGCGCCAGGTTTCGGGATG | + |
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Preference number: 6 (lower is better) Translates to: SQLSRPRAQGML*DGVEWAPGFGM Trigger: CATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | TGGGACGCCCATGCCACTCCTCCGCCCGGCCCCGCATaGCCTCGTTCAGTTCTGCCAAGCAGTCCGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: WDAHATPPPGPA*PRSVLPSSPHS Trigger: GGAATGCGGACTGCTTGGCAGAACTGAACGAGGCCATGCGGGGCCGGGCGGAGGAGTGGCATGGGCGTCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | CCTCGGGCTCAGGGGATGCTTTGCGACGGCGTGGAGTaGGCGCCAGGTTTCGGGATGGGGCTCTTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PRAQGMLCDGVE*APGFGMGLLEV Trigger: CACCTCCAAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | CTGGCGCCACCCAGTGCCGCTGTTGCTGCTCCTCCGTaGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LAPPSAAVAAPP*SSSQLSRPRAQ Trigger: CTGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | TTCTGCCTCTCCATTGCGTGCCACCAAACGATGCTGGGCCGGTGGTaGGGTTGTGGAGGAAGCCGCGGGGCTAGCACCCCCTGCGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: FCLSIACHQTMLGRW*GCGGSRGASTPCAD Trigger: GTCCGCGCAGGGGGTGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | CATCTTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATaGTTTGCGACGGCGTGGAGTGGGCGCCAGGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: HLPSCLALGLRG*FATAWSGRQVS Trigger: CGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | TATGGACCGCCTGGCGCCACCCAGTGCCGCTGTTGCTaGTCCTCCGTGGTCATCTTCCCAGCTGTCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: YGPPGATQCRCC*SSVVIFPAVSP Trigger: GGGCGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | TTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTTaGCGACGGCGTGGAGTGGGCGCCAGGTTTCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: FPAVSPSGSGDA*RRRGVGARFRD Trigger: ATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | TCCATTGCGTGCCACCAAACGATGCTGGGCCGGTGGTaGGGTTGTGGAGGAAGCCGCGGGGCTAGCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: SIACHQTMLGRW*GCGGSRGASTP Trigger: GGGGGTGCTAGCCCCGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | GTGGTCATCTTCCCAGCTGTCTCGCCCTCGGGCTCAGGGGATGCTTaGCGACGGCGTGGAGTGGGCGCCAGGTTTCGGGATGGGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VVIFPAVSPSGSGDA*RRRGVGARFRDGAL Trigger: AAGAGCCCCATCCCGAAACCTGGCGCCCACTCCACGCCGTCGCAAAGCATCCCCTGAGCCCGAGGGCGAGACAGCTGGGAAGATGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | GAGTATGGACCGCCTGGCGCCACCCAGTGCCGCTGTTaGTGCTCCTCCGTGGTCATCTTCCCAGCTGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: EYGPPGATQCRC*CSSVVIFPAVS Trigger: CGAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | GCTTCAGCTCGAACTCATAGCCCGGAGGGCGGGCAGTaGCATCAAAGGCGAACACCCGTCCCACCAGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: ASARTHSPEGGQ*HQRRTPVPPAR Trigger: ACGGGCTGGTGGGACGGGTGTTCGCCTTTGATGCCACTGCCCGCCCTCCGGGCTATGAGTTCGAGCTGAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | TCAGCCCCGGCAGTGGGGCTGACTTCTGCCTCTCCATaGCGTGCCACCAAACGATGCTGGGCCGGTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SAPAVGLTSASP*RATKRCWAGGW Trigger: CCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGGGCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 72 bp | CCTCGAAATTCACGCACCCGCGGCACACAGCCTCGCTaGAGTCCCACACCATGGCCCACGGCATCTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRNSRTRGTQPR*SPTPWPTASWA Trigger: TGCCCAAGATGCCGTGGGCCATGGTGTGGGACTTCAGCGAGGCTGTGTGCCGCGGGTGCGTGAATTTCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 72 bp | GAGGCCAGGGCCTTCCCTGGCTCTCGAAGAGCATCATaGAACATCTGGCGAGCCACTGCAAGGACCCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: EARAFPGSRRAS*NIWRATARTPA Trigger: CGCGGGGGTCCTTGCAGTGGCTCGCCAGATGTTTCATGATGCTCTTCGAGAGCCAGGGAAGGCCCTGGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | CCCGGCAGTGGGGCTGACTTCTGCCTCTCCATTGCGTaGCACCAAACGATGCTGGGCCGGTGGTTGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PGSGADFCLSIA*HQTMLGRWLGC Trigger: ACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | GCTGACAGCTTCAGCCCCGGCAGTGGGGCTGACTTCTaGCTCTCCATTGCGTGCCACCAAACGATGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ADSFSPGSGADF*LSIACHQTMLG Trigger: GCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGGGCTGAAGCTGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | AGAGTATGGACCGCCTGGCGCCACCCAGTGCCGCTGTaGCTGCTCCTCCGTGGTCATCTTCCCAGCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RVWTAWRHPVPL*LLLRGHLPSCL Trigger: GAGACAGCTGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | CTGACAGCTTCAGCCCCGGCAGTGGGGCTGACTTCTGCCTCTCCATaGCGTGCCACCAAACGATGCTGGGCCGGTGGTTGGGTTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LTASAPAVGLTSASP*RATKRCWAGGWVVE Trigger: CTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAGCCCCACTGCCGGGGCTGAAGCTGTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 72 bp | CCCCTGAACCATGGCGCCGTTCATACTCGAGGTACTTaGAGCCCGATGAGGCCAGGGCCTTCCCTGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLNHGAVHTRGT*SPMRPGPSLAL Trigger: GAGAGCCAGGGAAGGCCCTGGCCTCATCGGGCTTCAAGTACCTCGAGTATGAACGGCGCCATGGTTCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | GTCTCTGAAGAGTATGGACCGCCTGGCGCCACCCAGTaGCGCTGTTGCTGCTCCTCCGTGGTCATCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSEEYGPPGATQ*RCCCSSVVIFP Trigger: TGGGAAGATGACCACGGAGGAGCAGCAACAGCGGCACTGGGTGGCGCCAGGCGGTCCATACTCTTCAGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | CTGACTTCTGCCTCTCCATTGCGTGCCACCAAACGATaGTGGGCCGGTGGTTGGGTTGTGGAGGAAGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LTSASPLRATKR*WAGGWVVEEAA Trigger: CGCGGCTTCCTCCACAACCCAACCACCGGCCCAGCATCGTTTGGTGGCACGCAATGGAGAGGCAGAAGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | GGACAGAGGAACCCACCAGTGGACATTTGTCTCCACTaGGGCAGTACACCTCTCCGGCTGGGCCCTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GQRNPPVDICLH*GSTPLRLGPVP Trigger: AGGCACAGGGCCCAGCCGGAGAGGTGTACTGCCCCAGTGGAGACAAATGTCCACTGGTGGGTTCCTCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | TCCTTGGGTGAGTGGCCCAGAGCCTCGGCCACATTCTaGAGGGCAGCAATAGGTGAGGGCACACCAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SLGEWPRASATF*RAAIGEGTPGV Trigger: GACCCCTGGTGTGCCCTCACCTATTGCTGCCCTCAAGAATGTGGCCGAGGCTCTGGGCCACTCACCCAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 72 bp | TCCCCTGAACCATGGCGCCGTTCATACTCGAGGTACTaGAAGCCCGATGAGGCCAGGGCCTTCCCTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPEPWRRSYSRY*KPDEARAFPGS Trigger: AGAGCCAGGGAAGGCCCTGGCCTCATCGGGCTTCAAGTACCTCGAGTATGAACGGCGCCATGGTTCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 72 bp | ATGGCGCCGTTCATACTCGAGGTACTTGAAGCCCGATaGGGCCAGGGCCTTCCCTGGCTCTCGAAGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: MAPFILEVLEAR*GQGLPWLSKSI Trigger: GATGCTCTTCGAGAGCCAGGGAAGGCCCTGGCCTCATCGGGCTTCAAGTACCTCGAGTATGAACGGCGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | AAGCTGCGGACCCCATCCGTAAGCAGCTCTCCTAACTaGCGCCATTCCCCTGAACCATGGCGCCGTTCATAC | + |
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Preference number: 6 (lower is better) Translates to: KLRTPSVSSSPN*RHSPEPWRRSY Trigger: GTATGAACGGCGCCATGGTTCAGGGGAATGGCGCCAGTTAGGAGAGCTGCTTACGGATGGGGTCCGCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CAA 90 bp | GGGCCCTGTGCCTTGATAAACTCTCGGGAGCAAGGAAAGCAGAACTaGTGTCCGGGTACCGAGGGACACTGCACGAAGTGGGTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPCALINSREQGKQN*CPGTEGHCTKWVSS Trigger: GGAAGACACCCACTTCGTGCAGTGTCCCTCGGTACCCGGACACAAGTTCTGCTTTCCTTGCTCCCGAGAGTTTATCAAGGCACAGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | ACATTTGTCTCCACTGGGGCAGTACACCTCTCCGGCTaGGCCCTGTGCCTTGATAAACTCTCGGGAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TFVSTGAVHLSG*ALCLDKLSGAR Trigger: CCTTGCTCCCGAGAGTTTATCAAGGCACAGGGCCCAGCCGGAGAGGTGTACTGCCCCAGTGGAGACAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS TCA 72 bp | CCGCGTAAACATTGCCAGAACCACAGGGGTATTCGGTaGAGAGCTTCAGCTCGAACTCATAGCCCGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRKHCQNHRGIR*RASARTHSPEG Trigger: GCCCTCCGGGCTATGAGTTCGAGCTGAAGCTCTTCACCGAATACCCCTGTGGTTCTGGCAATGTTTACGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS CCA 72 bp | AACTTGTGTCCGGGTACCGAGGGACACTGCACGAAGTaGGTGTCTTCCAGCCTTTCTCTGCACAGGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: NLCPGTEGHCTK*VSSSLSLHRVQ Trigger: CTGTACCCTGTGCAGAGAAAGGCTGGAAGACACCCACTTCGTGCAGTGTCCCTCGGTACCCGGACACAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | GCCTCGTTCAGTTCTGCCAAGCAGTCCGCATTCCTCTaGTGCTTCTCCTTCTCGAAATCGGAGCCGAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASFSSAKQSAFL*CFSFSKSEPKS Trigger: ACTTTTCGGCTCCGATTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGACTGCTTGGCAGAACTGAACGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | CTCTCGAAGAGCATCATGAAACATCTGGCGAGCCACTaGAAGGACCCCCGCGTAAACATTGCCAGAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: LSKSIMKHLASH*KDPRVNIARTT Trigger: TGTGGTTCTGGCAATGTTTACGCGGGGGTCCTTGCAGTGGCTCGCCAGATGTTTCATGATGCTCTTCGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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| CDS GCA 72 bp | TCGTTCAGTTCTGCCAAGCAGTCCGCATTCCTCTGCTaGTTCTCCTTCTCGAAATCGGAGCCGAAAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SFSSAKQSAFLC*FSFSKSEPKSG Trigger: TCCACTTTTCGGCTCCGATTTCGAGAAGGAGAAGCAGCAGAGGAATGCGGACTGCTTGGCAGAACTGAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053713.5 |
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