Pregenerated sensors for IRF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031627Ensembl transcript IDs: ENSMUST00000034041.9, ENSMUST00000207105.2, ENSMUST00000207571.3, ENSMUST00000208433.2, ENSMUST00000208507.2, ENSMUST00000210218.2, ENSMUST00000210284.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTaGCTGTTGGTCCTTGAACTTGAGGGAGTAGCCCTGGCAGATCCA | + |
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Preference number: 1 (lower is better) Translates to: MLALTVGNAAPPLPV*LLVLELEGVALADP Trigger: TGGATCTGCCAGGGCTACTCCCTCAAGTTCAAGGACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR TCA 90 bp | TCGCCATGCTGGGCAGCAGATAGGTGTTCCGTGTCCCCATGTTGCTaGGGTACTGCTTGCCTTCGATGCTCCTCTTCCTCCAGTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SPCWAADRCSVSPCC*GTACLRCSSSSSVV Trigger: GACCACACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAACATGGGGACACGGAACACCTATCTGCTGCCCAGCATGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR CCA 90 bp | GTAAGGCATCGGACAGCTATCCTCTTTGATGGTGACCTGCAGATCTaGCTTGTTGGAGGTGACAAAGGTCGCCATGCTGGGCAGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: VRHRTAILFDGDLQI*LVGGDKGRHAGQQI Trigger: TATCTGCTGCCCAGCATGGCGACCTTTGTCACCTCCAACAAGCCAGATCTGCAGGTCACCATCAAAGAGGATAGCTGTCCGATGCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR CCA 90 bp | CTGGTCATCACTCTCAGTGGTCACTTCTACAACCTGGCAGATGTCTaGCGGGTTAGTGACGATCTCTTGATCTTCAATGTTGCTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LVITLSGHFYNLADV*RVSDDLLIFNVAVQ Trigger: CTGGACAGCAACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAGGTTGTAGAAGTGACCACTGAGAGTGATGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR GCA 90 bp | GTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTaGTTCAAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTAC | + |
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Preference number: 1 (lower is better) Translates to: VCCEGEQDYKKAYCK*FKIRCRSSPRHCSY Trigger: GTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR GCA 90 bp | GAGCAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTaGAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATA | + |
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Preference number: 1 (lower is better) Translates to: EQDYKKAYCKCFKIR*RSSPRHCSYCPMYI Trigger: TATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTTGGTCACGCAGCACCTCCACTaGCCGTGTGGCTGTTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LALTVGNAAPPLPVWLLVTQHLH*PCGCWS Trigger: GGACCAACAGCCACACGGGCAGTGGAGGTGCTGCGT...GACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGGGGCGTGGGGGTCACTaGGGCAGGAAGGGGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: VGSGVVDTEGVAECAVKEGRGGH*GRKGKV Trigger: GACCTTCCCCTTCCTGCCCCAGTGACCCCCACGCCC...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR CAA 90 bp | GCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTaGGTCCTTGAACTTGAGGGAGTAGCCCTGGCAGATCCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ALTVGNAAPPLPVWL*VLELEGVALADPAG Trigger: ACCTGCTGGATCTGCCAGGGCTACTCCCTCAAGTTCAAGGACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGCTCATGCTGACTGGCTaGTCATCACTCTCAGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: VGSGVVDTEGVAECAVKELMLTG*SSLSVV Trigger: GACCACTGAGAGTGATGACCAGCCAGTCAGCATGAG...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATCCTCTTCCTCCAGTGTaGTCTCCCCTCTGCGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: WGSGHRRGRRVCCEGEQDPLPPV*SPLCVL Trigger: GAGAACGCAGAGGGGAGACCACACTGGAGGAAGAGG...ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATCCTCCACTGCCCGTGTaGCTGTTGGTCCTTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: WGSGHRRGRRVCCEGEQDPPLPV*LLVLEL Trigger: AAGTTCAAGGACCAACAGCCACACGGGCAGTGGAGG...ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGCTCACTCATGCTGACTaGCTGGTCATCACTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VGSGVVDTEGVAECAVKELTHAD*LVITLS Trigger: ACTGAGAGTGATGACCAGCCAGTCAGCATGAGTGAG...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCCAGCTAGTTCACATTTTCTCCTCCGTTCTGAGGCATCCACTCCACCATCCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: KFQLVHIFSSVLRHPLHHPGLPV*PTAAGR Trigger: ACGCCCAGCAGCAGTCGGCCAGACCGGGAGACCCGG...ATGGTGGAGTGGATGCCTCAGAACGGAGGAGAAAATGTGAACTAGCTGGAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAGTGTCCCCATGTTGCTaGGGTACTGCTTGCCTTCGA | + |
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Preference number: 2 (lower is better) Translates to: PPPRCRALPLRRGNWRKGVSPCC*GTACLR Trigger: TCGAAGGCAAGCAGTACCTCAGCAACATGGGGACAC...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACAGTGTGGTCTCCCCTCTaGGTTCTCTTCATCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: RCRSSPRHCSYCPMYIFTVWSPL*VLFITG Trigger: GCCAGTGATGAAGAGAACGCAGAGGGGAGACCACAC...TGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACATGCCCGTGTGGCTGTTaGTCCTTGAACTTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RCRSSPRHCSYCPMYIFTCPCGC*SLNLRE Trigger: CTCCCTCAAGTTCAAGGACCAACAGCCACACGGGCA...TGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCTTTTCTCCTCCGTTCTaGGGCATCCACTCCACCATG | + |
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Preference number: 2 (lower is better) Translates to: IRCRSSPRHCSYCPMYIFFSPPF*GIHSTM Trigger: CATGGTGGAGTGGATGCCTCAGAACGGAGGAGAAAA...GAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAGTCACTTCTACAACCTaGCAGATGTCTGGCGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: PPPRCRALPLRRGNWRKGVTSTT*QMSGGL Trigger: TAACCCGCCAGACATCTGCCAGGTTGTAGAAGTGAC...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAAAGAAGCTCCAGCTCTaGAGTTGGACACAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: PPPRCRALPLRRGNWRKGKKLQL*SWTQQS Trigger: TGATTGCTGTGTCCAACTCCAGAGCTGGAGCTTCTT...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGATTAGTGACGATCTCTTaGTCTTCAATGTTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VDTEGVAECAVKESKITRLVTIS*SSMLLS Trigger: GGACAGCAACATTGAAGATCAAGAGATCGTCACTAA...TCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGCGACATTGCTCGTACTaGCCTATGTACATATTCACA | + |
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Preference number: 2 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKRHCSY*PMYIFT Trigger: TGTGAATATGTACATAGGGCAGTACGAGCAATGTCG...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATCTTTGATGGTGACCTaGAGATCTGGCTTGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KIRCRSSPRHCSYCPMYISLMVT*RSGLLE Trigger: CTCCAACAAGCCAGATCTGCAGGTCACCATCAAAGA...TATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAACAGGGCTCCAGCTCTGGAGTTaGACACAGCAATCAATAATC | + |
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Preference number: 2 (lower is better) Translates to: PRCRALPLRRGNWRKGTGLQLWS*TQQSII Trigger: GATTATTGATTGCTGTGTCCAACTCCAGAGCTGGAG...CCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAACAGGGCGACATTGCTCGTACTaGCCTATGTACATATTCACA | + |
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Preference number: 2 (lower is better) Translates to: PRCRALPLRRGNWRKGTGRHCSY*PMYIFT Trigger: TGTGAATATGTACATAGGGCAGTACGAGCAATGTCG...CCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTaGTTCAAGATAAGGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKKAYCK*FKIRCR Trigger: TCTGCACCTTATCTTGAAGCACTTACAATAGGCCTT...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATACTTGATCTTCAATGTTaGTGTCCAGATGGGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: KIRCRSSPRHCSYCPMYILDLQC*CPDGTV Trigger: GACAGTCCCATCTGGACAGCAACATTGAAGATCAAG...TATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCCAGCTAGTTCACATTTTCTCCTCCGTTCTGAGGCATCCACTCCACCATGGTCATCACTCTCAGTaGTCACTTCTACAACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KFQLVHIFSSVLRHPLHHGHHSQ*SLLQPG Trigger: GCCAGGTTGTAGAAGTGACCACTGAGAGTGATGACC...ATGGTGGAGTGGATGCCTCAGAACGGAGGAGAAAATGTGAACTAGCTGGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCCAAAGGTCGCCATGCTaGGCAGCAGATAGGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSQRSPC*AADRCS Trigger: GGAACACCTATCTGCTGCCCAGCATGGCGACCTTTG...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCAGAGCTCACTCATGCTaGCTGGCTGGTCATCACTCT | + |
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Preference number: 2 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSRAHSC*LAGHHS Trigger: AGAGTGATGACCAGCCAGTCAGCATGAGTGAGCTCT...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATAGGGGTCGCCGAGTGTaGTGTGAAGGAGAGCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: NISMTVFLCTACHSSIADRGRRV*CEGEQD Trigger: ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCT...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAACAGGGATCCACAGGATAATTTaGTTGCTACATGAGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: PRCRALPLRRGNWRKGTGIHRII*LLHELI Trigger: TATGAGCTCATGTAGCAATCAAATTATCCTGTGGAT...CCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR GCA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATACTGCTTGCCTTCGATaGTCCTCTTCCTCCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NISMTVFLCTACHSSIADTACLR*SSSSSV Trigger: CACACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGT...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATGGGAAGGTCTGTAAATaGGGGCCAGGAGCTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: NISMTVFLCTACHSSIADGKVCK*GPGAVV Trigger: TACAACAGCTCCTGGCCCCCATTTACAGACCTTCCC...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCAAGAAGCTCCAGCTCTaGAGTTGGACACAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSKKLQL*SWTQQS Trigger: TGATTGCTGTGTCCAACTCCAGAGCTGGAGCTTCTT...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR CAA 90 bp | GCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTaGCATAATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ALVRIRVFSVFRSGN*HNISMTVFLCTACH Trigger: ATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATTATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034041.9 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| 3UTR CCA 72 bp | TGTCTTCTTGATGACACTGGCCCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGGCGTGGGGGTCACTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: CLLDDTGPGLPV*PTAAGRGGHWG Trigger: GCCCCAGTGACCCCCACGCCCAGCAGCAGTCGGCCAGACCGGGAGACCCGGGCCAGTGTCATCAAGAAGACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR CCA 72 bp | TTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTaGCTGTTGGTCCTTGAACTTGAGGGAGTAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LTVGNAAPPLPV*LLVLELEGVAL Trigger: CAGGGCTACTCCCTCAAGTTCAAGGACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR CCA 72 bp | AACTGGAGGAAAGGAACAGGGTGGGATGGGGTAGGCTaGGCTGAGGAGAGAGGCGTGGGTAATGGGCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: NWRKGTGWDGVG*AEERGVGNGLE Trigger: TTCTAGCCCATTACCCACGCCTCTCTCCTCAGCCCAGCCTACCCCATCCCACCCTGTTCCTTTCCTCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR TCA 72 bp | TGGGCAGCAGATAGGTGTTCCGTGTCCCCATGTTGCTaGGGTACTGCTTGCCTTCGATGCTCCTCTTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: WAADRCSVSPCC*GTACLRCSSSS Trigger: GGAGGAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAACATGGGGACACGGAACACCTATCTGCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR CCA 72 bp | GTACTGCTTGCCTTCGATGCTCCTCTTCCTCCAGTGTaGTCTCCCCTCTGCGTTCTCTTCATCACTGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: VLLAFDAPLPPV*SPLCVLFITGH Trigger: GTGGCCAGTGATGAAGAGAACGCAGAGGGGAGACCACACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR TCA 72 bp | CTCCTCCTCCTCCTCCAAGATGTAGAGCCTTGCCTTTaGGGAGAGGAAACTGGAGGAAAGGAACAGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LLLLLQDVEPCL*GEETGGKEQGG Trigger: CCCACCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGGAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCTCCACCATGCTGGCCTaGACCGTAGGCAACGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: IRCRSSPRHCSYCPMYIFSTMLA*TVGNAA Trigger: TGCTGCGTTGCCTACGGTCAAGGCCAGCATGGTGGA...GAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGGTTAGTGACGATCTCTaGATCTTCAATGTTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VGSGVVDTEGVAECAVKEVSDDL*IFNVAV Trigger: GACAGCAACATTGAAGATCAAGAGATCGTCACTAAC...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGATGCAGATCTGGCTTGTaGGAGGTGACAAAGGTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: PPPRCRALPLRRGNWRKGCRSGL*EVTKVA Trigger: GGCGACCTTTGTCACCTCCAACAAGCCAGATCTGCA...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAACCTGCAGATCTGGCTaGTTGGAGGTGACAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VDTEGVAECAVKESKITRTCRSG*LEVTKV Trigger: GACCTTTGTCACCTCCAACAAGCCAGATCTGCAGGT...TCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGATTGCTGAGGTACTGCTaGCCTTCGATGCTCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PPPRCRALPLRRGNWRKGLLRYC*PSMLLF Trigger: GAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAA...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAACAGGGCCAAGATGTAGAGCCTaGCCTTTGAGGAGAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRCRALPLRRGNWRKGTGPRCRA*PLRRGN Trigger: GTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG...CCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTGCGGACAGCTATCCTCTTaGATGGTGACCTGCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: RRVCCEGEQDYKKAYCKCGQLSS*MVTCRS Trigger: AGATCTGCAGGTCACCATCAAAGAGGATAGCTGTCC...GCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR TCA 72 bp | CAGGAGAAATCTGTAGAGGGTAGAGCTCACTCATGCTaGCTGGCTGGTCATCACTCTCAGTGGTCACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QEKSVEGRAHSC*LAGHHSQWSLL Trigger: TAGAAGTGACCACTGAGAGTGATGACCAGCCAGTCAGCATGAGTGAGCTCTACCCTCTACAGATTTCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR GCA 72 bp | TACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTaGAGAAGCAGCCCGCGACATTGCTCGTACTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YKKAYCKCFKIR*RSSPRHCSYCP Trigger: AGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| 3UTR CCA 72 bp | ACTCTCAGTGGTCACTTCTACAACCTGGCAGATGTCTaGCGGGTTAGTGACGATCTCTTGATCTTCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLSGHFYNLADV*RVSDDLLIFNV Trigger: AACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAGGTTGTAGAAGTGACCACTGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| 3UTR GCA 72 bp | TGCTTCAAGATAAGGTGCAGAAGCAGCCCGCGACATTaGTCGTACTGCCCTATGTACATATTCACAAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: CFKIRCRSSPRH*SYCPMYIFTRI Trigger: TATTCTTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTTGGTCCCCGGTCTGGCCGACTaGTGCTGGGCGTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LALTVGNAAPPLPVWLLVPGLAD*CWAWGS Trigger: TGACCCCCACGCCCAGCAGCAGTCGGCCAGACCGGG...GACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGGACTGCTGCTGGGCGTaGGGGTCACTGGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSGVVDTEGVAECAVKEDCCWA*GSLGQE Trigger: TTCCTGCCCCAGTGACCCCCACGCCCAGCAGCAGTC...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGGAGTAGCCCTGGCAGATCCAGCAGGTTCTAGAGATACGCATCTACCGGGGCGTGGGGGTCACTaGGGCAGGAAGGGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGVALADPAGSRDTHLPGRGGH*GRKGKV Trigger: GACCTTCCCCTTCCTGCCCCAGTGACCCCCACGCCC...CGGTAGATGCGTATCTCTAGAACCTGCTGGATCTGCCAGGGCTACTCCCTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| 3UTR CAA 72 bp | GTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTaGGTCCTTGAACTTGAGGGAGTAGCCCTGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGNAAPPLPVWL*VLELEGVALAD Trigger: ATCTGCCAGGGCTACTCCCTCAAGTTCAAGGACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| 3UTR CAA 72 bp | CTCTTGACACGGGCCTGGGTGATATCAGATGTCTTCTaGATGACACTGGCCCGGGTCTCCCGGTCTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTRAWVISDVF*MTLARVSRSGR Trigger: TCGGCCAGACCGGGAGACCCGGGCCAGTGTCATCAAGAAGACATCTGATATCACCCAGGCCCGTGTCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAGGTACTGCTTGCCTTCGATGCTCCTCTTCCTCCAGTGTGGTCTCCCCCCGTGCCGAGCCGCATaGATCCAGGGGATCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRYCLPSMLLFLQCGLPPCRAA*IQGIWK Trigger: TTTCCAGATCCCCTGGATGCATGCGGCTCGGCACGG...GGGGAGACCACACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTGCCCGGGTCTCCCGGTCTaGCCGACTGCTGCTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVCCEGEQDYKKAYCKCPGLPV*PTAAGR Trigger: ACGCCCAGCAGCAGTCGGCCAGACCGGGAGACCCGG...GCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | GTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGATCCACGTCCCATCCGTaGCGAGCCGCATGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDTEGVAECAVKESKITRSTSHP*RAACIQ Trigger: CTGGATGCATGCGGCTCGGCACGGATGGGACGTGGA...TCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGTCCTTGAACTTGAGGGAGTAGCCCTGGCAGATCCAGCAGGTTCTAGATCCACGTCCCATCCGTaGCGAGCCGCATGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVLELEGVALADPAGSRSTSHP*RAACIQ Trigger: CTGGATGCATGCGGCTCGGCACGGATGGGACGTGGA...TCTAGAACCTGCTGGATCTGCCAGGGCTACTCCCTCAAGTTCAAGGACCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGGTCACTTCTACAACCTaGCAGATGTCTGGCGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGSGVVDTEGVAECAVKEVTSTT*QMSGGL Trigger: TAACCCGCCAGACATCTGCCAGGTTGTAGAAGTGAC...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATCAAAGGTCGCCATGCTaGGCAGCAGATAGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGSGHRRGRRVCCEGEQDQRSPC*AADRCS Trigger: GGAACACCTATCTGCTGCCCAGCATGGCGACCTTTG...ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACAACCGTGCCGAGCCGCATaGATCCAGGGGATCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAEAARDIARTALCTYSQPCRAA*IQGIWK Trigger: TTTCCAGATCCCCTGGATGCATGCGGCTCGGCACGG...TTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACTCCACCATGCTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCTGCATCCAGGGGATCTaGAAAATCTTCTTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHSTMLALTVGNAAPPLPCIQGI*KIFFSL Trigger: CAAGGAGAAGAAGATTTTCCAGATCCCCTGGATGCA...GGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAGCATGGTGGAGTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTTGGTCGTTTCTTTCCTTTCTTaGAAGGTCGTTCGGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LALTVGNAAPPLPVWLLVVSFLS*KVVRIR Trigger: CCTTATCCGAACGACCTTCCAAGAAAGGAAAGAAAC...GACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGACCTCTTCCTCCAGTGTaGTCTCCCCTCTGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDTEGVAECAVKESKITRPLPPV*SPLCVL Trigger: GAGAACGCAGAGGGGAGACCACACTGGAGGAAGAGG...TCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGGTGTCCCCATGTTGCTaGGGTACTGCTTGCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKVSPCC*GTACLR Trigger: TCGAAGGCAAGCAGTACCTCAGCAACATGGGGACAC...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGCTTGATCTTCAATGTTaGTGTCCAGATGGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGSGVVDTEGVAECAVKELDLQC*CPDGTV Trigger: GACAGTCCCATCTGGACAGCAACATTGAAGATCAAG...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGGTGTGGTCTCCCCTCTaGGTTCTCTTCATCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKVWSPL*VLFITG Trigger: GCCAGTGATGAAGAGAACGCAGAGGGGAGACCACAC...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGGTATTGGAATTTATCTaGTCCTCCAGCCACGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKVLEFI*SSSHGR Trigger: GCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATAC...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTTGACCGTAGGCAACGCAGCACCTCCACTGCCCGTGTGGCTGTTGGTCGGCACATCGAAAATTTaGTTTCCATGTTTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LALTVGNAAPPLPVWLLVGTSKI*FPCFWI Trigger: GATCCAAAAACATGGAAAGCAAATTTTCGATGTGCC...GACCAACAGCCACACGGGCAGTGGAGGTGCTGCGTTGCCTACGGTCAAGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGACTGCTTGCCTTCGATaGTCCTCTTCCTCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKTACLR*SSSSSV Trigger: CACACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGT...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAGGATCGCCCAGTTTCTaGAGAGCGGAGCATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPRCRALPLRRGNWRKGGSPSF*RAEHPF Trigger: AAAAGGATGCTCCGCTCTTCAGAAACTGGGCGATCC...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | CGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTGCGTATTGGAATTTATCTaGTCCTCCAGCCACGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVCCEGEQDYKKAYCKCVLEFI*SSSHGR Trigger: GCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATAC...GCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCGGGAAGGTCTGTAAATaGGGGCCAGGAGCTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRCRSSPRHCSYCPMYIFGKVCK*GPGAVV Trigger: TACAACAGCTCCTGGCCCCCATTTACAGACCTTCCC...GAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGGAGTAGCCCTGGCAGATCCAGCAGGTTCTAGAGATACGCATCTACCGACTGTCCTACAACTATaGTGTTCACCGTACTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGVALADPAGSRDTHLPTVLQL*CSPYYP Trigger: TGGATAGTACGGTGAACATCATAGTTGTAGGACAGT...CGGTAGATGCGTATCTCTAGAACCTGCTGGATCTGCCAGGGCTACTCCCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGATCTTTGATGGTGACCTaGAGATCTGGCTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPRCRALPLRRGNWRKGSLMVT*RSGLLE Trigger: CTCCAACAAGCCAGATCTGCAGGTCACCATCAAAGA...TCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCCTCACTCATGCTGACTaGCTGGTCATCACTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRCRSSPRHCSYCPMYIFLTHAD*LVITLS Trigger: ACTGAGAGTGATGACCAGCCAGTCAGCATGAGTGAG...GAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR TCA 90 bp | AAATTCCAGCTAGTTCACATTTTCTCCTCCGTTCTGAGGCATCCACTCCACCATGGATCGCCCAGTTTCTaGAGAGCGGAGCATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFQLVHIFSSVLRHPLHHGSPSF*RAEHPF Trigger: AAAAGGATGCTCCGCTCTTCAGAAACTGGGCGATCC...ATGGTGGAGTGGATGCCTCAGAACGGAGGAGAAAATGTGAACTAGCTGGAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACAAGCCCTGGTATCGTATTaGAATTTATCTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAEAARDIARTALCTYSQALVSY*NLSAPP Trigger: TGGAGGAGCAGATAAATTCCAATACGATACCAGGGC...TTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACAAATGTTGCTGTCCAGATaGGACTGTCCTACAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: GAEAARDIARTALCTYSQMLLSR*DCPTTM Trigger: CATAGTTGTAGGACAGTCCCATCTGGACAGCAACAT...TTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGTTATCTATTCCTGGTTaGTGCTTTCCTGTATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGHRRGRRVCCEGEQDYKLSIPG*CFPVWI Trigger: GATCCATACAGGAAAGCATCAACCAGGAATAGATAA...CTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTTATCTATTCCTGGTTaGTGCTTTCCTGTATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CFKIRCRSSPRHCSYCPMLSIPG*CFPVWI Trigger: GATCCATACAGGAAAGCATCAACCAGGAATAGATAA...CATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACTAAGCCCCAAAGATaGCTCAACTGGTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRCRSSPRHCSYCPMYIFTKPQR*LNWFLL Trigger: AAGCAAGAACCAGTTGAGTCATCTTTGGGGCTTAGT...GAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| 3UTR CAA 72 bp | GTGCTTCAAGATAAGGTGCAGAAGCAGCCCGCGACATaGCTCGTACTGCCCTATGTACATATTCACAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLQDKVQKQPAT*LVLPYVHIHKN Trigger: ATTCTTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCATGTTGCTGAGGTACTaGTTGCCTTCGATGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSMLLRY*LPSMLL Trigger: GAGGAGCATCGAAGGCAAGCAGTACCTCAGCAACAT...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATTCACAACCATGTTTTTGGATCTaGTTTATCTATTCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAEAARDIARTALCTYSQPCFWI*FIYSWL Trigger: CAACCAGGAATAGATAAACCAGATCCAAAAACATGG...TTGTGAATATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGATGTAGAGCCTTGCCTTTGAGGAGAGGAAACTGGAGGAAAGGAACAGGGCCATGTTTTTGGATCTaGTTTATCTATTCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRCRALPLRRGNWRKGTGPCFWI*FIYSWL Trigger: CAACCAGGAATAGATAAACCAGATCCAAAAACATGG...CCCTGTTCCTTTCCTCCAGTTTCCTCTCCTCAAAGGCAAGGCTCTACATCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR TCA 90 bp | CTTGCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTTGCATAGAGCTCACTCATGCTaGCTGGCTGGTCATCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LALVRIRVFSVFRSGNLHRAHSC*LAGHHS Trigger: AGAGTGATGACCAGCCAGTCAGCATGAGTGAGCTCT...ATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR GCA 90 bp | CTTGCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTTGCATGTATTGGAATTTATCTaGTCCTCCAGCCACGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LALVRIRVFSVFRSGNLHVLEFI*SSSHGR Trigger: GCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATAC...ATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034041.9 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| CDS-3UTR CCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCGCCCTGGTATCGTATTaGAATTTATCTGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSALVSY*NLSAPP Trigger: TGGAGGAGCAGATAAATTCCAATACGATACCAGGGC...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR CCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCTGCATCCAGGGGATCTaGAAAATCTTCTTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSCIQGI*KIFFSL Trigger: CAAGGAGAAGAAGATTTTCCAGATCCCCTGGATGCA...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR GCA 90 bp | AAATTCCAGCTAGTTCACATTTTCTCCTCCGTTCTGAGGCATCCACTCCACCATGGCACATCGAAAATTTaGTTTCCATGTTTTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: KFQLVHIFSSVLRHPLHHGTSKI*FPCFWI Trigger: GATCCAAAAACATGGAAAGCAAATTTTCGATGTGCC...ATGGTGGAGTGGATGCCTCAGAACGGAGGAGAAAATGTGAACTAGCTGGAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR GCA 90 bp | CTTGCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTTGCATGGTAGTTTCGCTTTCTaGGTAGGAAGACACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LALVRIRVFSVFRSGNLHGSFAF*VGRHRR Trigger: TCTCCTGTGTCTTCCTACGCAGAAAGCGAAACTACC...ATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CCA 90 bp | CAAGATTACAAGAAGGCCTATTGTAAGTGCTTCAAGATAAGGTGCAGAAGCAGCGTTTCTTTCCTTTCTTaGAAGGTCGTTCGGATAAGG | + |
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Preference number: 4 (lower is better) Translates to: QDYKKAYCKCFKIRCRSSVSFLS*KVVRIR Trigger: CCTTATCCGAACGACCTTCCAAGAAAGGAAAGAAAC...GCTGCTTCTGCACCTTATCTTGAAGCACTTACAATAGGCCTTCTTGTAATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR TCA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATTTAGTGACGATCTCTTaGTCTTCAATGTTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NISMTVFLCTACHSSIADLVTIS*SSMLLS Trigger: GGACAGCAACATTGAAGATCAAGAGATCGTCACTAA...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CCA 90 bp | CTTGCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTTGCATGCCCTGGTATCGTATTaGAATTTATCTGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LALVRIRVFSVFRSGNLHALVSY*NLSAPP Trigger: TGGAGGAGCAGATAAATTCCAATACGATACCAGGGC...ATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034041.9 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| CDS-3UTR TCA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATAAAATGGGACAGCGGTaGAGAAACTCATTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NISMTVFLCTACHSSIADKMGQR*RNSFSS Trigger: AGAAGAAAATGAGTTTCTTCACCGCTGTCCCATTTT...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210218.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTGCAGATCTGGCTTGTaGGAGGTGACAAAGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: WGSGHRRGRRVCCEGEQDCRSGL*EVTKVA Trigger: GGCGACCTTTGTCACCTCCAACAAGCCAGATCTGCA...ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CAA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCCCTGGTATCGTATaGGAATTTATCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VGSGVVDTEGVAECAVKESPGIV*EFICSS Trigger: GGAGGAGCAGATAAATTCCAATACGATACCAGGGCT...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATACCTGCAGATCTGGCTaGTTGGAGGTGACAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: WGSGHRRGRRVCCEGEQDTCRSG*LEVTKV Trigger: GACCTTTGTCACCTCCAACAAGCCAGATCTGCAGGT...ATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CAA 90 bp | GTGGGTAGTGGGGTAGTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAAAATCTTCTTCTCCTaGTTCAGCCACTTTAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VGSGVVDTEGVAECAVKEKIFFS*FSHFSP Trigger: AGGGCTAAAGTGGCTGAACAAGGAGAAGAAGATTTT...CTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCACTACCCCACTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCAAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTTGCTGAGGTACTGCTaGCCTTCGATGCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CFKIRCRSSPRHCSYCPMLLRYC*PSMLLF Trigger: GAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAA...CATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CAA 90 bp | CTTGAGGGAGTAGCCCTGGCAGATCCAGCAGGTTCTAGAGATACGCATCTACCGAGCCCTGGTATCGTATaGGAATTTATCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LEGVALADPAGSRDTHLPSPGIV*EFICSS Trigger: GGAGGAGCAGATAAATTCCAATACGATACCAGGGCT...CGGTAGATGCGTATCTCTAGAACCTGCTGGATCTGCCAGGGCTACTCCCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR CAA 90 bp | AAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATAGGACAGCTATCCTCTTaGATGGTGACCTGCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: KIRCRSSPRHCSYCPMYIGQLSS*MVTCRS Trigger: AGATCTGCAGGTCACCATCAAAGAGGATAGCTGTCC...TATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CAA 90 bp | CGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTGCATATCAGATGTCTTCTaGATGACACTGGCCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RRVCCEGEQDYKKAYCKCISDVF*MTLARV Trigger: GACCCGGGCCAGTGTCATCAAGAAGACATCTGATAT...GCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS CCA 90 bp | TCATTTTCTTCTCCTTGTTCAGCCACTTTAGCCCTGGTATCGTATTaGAATTTATCTGCTCCTCCAGCCACGGGCGCATTCGCATCCGTT | + |
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Preference number: 5 (lower is better) Translates to: SFSSPCSATLALVSY*NLSAPPATGAFASV Trigger: AACGGATGCGAATGCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATACGATACCAGGGCTAAAGTGGCTGAACAAGGAGAAGAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210218.2 |
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| CDS-3UTR CAA 90 bp | GTGGACACAGAAGGGGTCGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAGTTAGTGACGATCTCTaGATCTTCAATGTTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VDTEGVAECAVKESKITRVSDDL*IFNVAV Trigger: GACAGCAACATTGAAGATCAAGAGATCGTCACTAAC...TCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCGACCCCTTCTGTGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS TCA 90 bp | ACTTCTACAACCTGGCAGATGTCTGGCGGGTTAGTGACGATCTCTTaGTCTTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTATG | + |
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Preference number: 5 (lower is better) Translates to: TSTTWQMSGGLVTIS*SSMLLSRWDCPTTM Trigger: CATAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAGGTTGTAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 |
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| CDS-3UTR CAA 90 bp | CGCCGAGTGTGCTGTGAAGGAGAGCAAGATTACAAGAAGGCCTATTGTAAGTGCAAAATCTTCTTCTCCTaGTTCAGCCACTTTAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RRVCCEGEQDYKKAYCKCKIFFS*FSHFSP Trigger: AGGGCTAAAGTGGCTGAACAAGGAGAAGAAGATTTT...GCACTTACAATAGGCCTTCTTGTAATCTTGCTCTCCTTCACAGCACACTCGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000210284.2 |
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| CDS-3UTR CAA 90 bp | AAGATAAGGTGCAGAAGCAGCCCGCGACATTGCTCGTACTGCCCTATGTACATATCAACTGGTTCTTGCTaGATGTGCTTAACTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KIRCRSSPRHCSYCPMYISTGSC*MCLTLS Trigger: AGAGAGAGTTAAGCACATCAAGCAAGAACCAGTTGA...TATGTACATAGGGCAGTACGAGCAATGTCGCGGGCTGCTTCTGCACCTTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034041.9 |
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| CDS-3UTR CAA 90 bp | CTTGCTCTGGTTAGAATTAGAGTATTTTCCGTCTTCAGATCTGGGAATTTGCATAGCCCTGGTATCGTATaGGAATTTATCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LALVRIRVFSVFRSGNLHSPGIV*EFICSS Trigger: GGAGGAGCAGATAAATTCCAATACGATACCAGGGCT...ATGCAAATTCCCAGATCTGAAGACGGAAAATACTCTAATTCTAACCAGAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034041.9 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| CDS-3UTR CAA 90 bp | AATATTTCCATGACAGTTTTCCTTTGTACCGCGTGCCATTCAAGCATAGCAGATCTCATTTTCTTCTCCTaGTTCAGCCACTTTAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: NISMTVFLCTACHSSIADLIFFS*FSHFSP Trigger: AGGGCTAAAGTGGCTGAACAAGGAGAAGAAAATGAG...ATCTGCTATGCTTGAATGGCACGCGGTACAAAGGAAAACTGTCATGGAAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210218.2 |
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| CDS CCA 90 bp | TTATGCTTCTGTCCTTCACTTCCTCAATGTCGGGCAGGGAATTCATaGCACATCGAAAATTTGCTTTCCATGTTTTTGGATCTGGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LCFCPSLPQCRAGNS*HIENLLSMFLDLVY Trigger: ATAAACCAGATCCAAAAACATGGAAAGCAAATTTTCGATGTGCCATGAATTCCCTGCCCGACATTGAGGAAGTGAAGGACAGAAGCATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210284.2 |
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| CDS TCA 72 bp | CTGGTTGATGCTTTCCTGTATGGATCGCCCAGTTTCTaGAGAGCGGAGCATCCTTTTCCACGTCCCATCCGT | + |
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Preference number: 6 (lower is better) Translates to: LVDAFLYGSPSF*RAEHPFPRPIR Trigger: ACGGATGGGACGTGGAAAAGGATGCTCCGCTCTTCAGAAACTGGGCGATCCATACAGGAAAGCATCAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 ENSMUST00000207571.3 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210284.2 |
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| CDS TCA 72 bp | ACCTGGCAGATGTCTGGCGGGTTAGTGACGATCTCTTaGTCTTCAATGTTGCTGTCCAGATGGGACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TWQMSGGLVTIS*SSMLLSRWDCP Trigger: AGGACAGTCCCATCTGGACAGCAACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 |
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| CDS CCA 72 bp | TCTCCTTGTTCAGCCACTTTAGCCCTGGTATCGTATTaGAATTTATCTGCTCCTCCAGCCACGGGCGCATTC | + |
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Preference number: 6 (lower is better) Translates to: SPCSATLALVSY*NLSAPPATGAF Trigger: GAATGCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATACGATACCAGGGCTAAAGTGGCTGAACAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034041.9 ENSMUST00000207571.3 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| CDS CAA 90 bp | CTCATTTTCTTCTCCTTGTTCAGCCACTTTAGCCCTGGTATCGTATaGGAATTTATCTGCTCCTCCAGCCACGGGCGCATTCGCATCCGT | + |
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Preference number: 6 (lower is better) Translates to: LIFFSLFSHFSPGIV*EFICSSSHGRIRIR Trigger: ACGGATGCGAATGCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATACGATACCAGGGCTAAAGTGGCTGAACAAGGAGAAGAAAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210218.2 |
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| CDS CAA 72 bp | TTCTCCTTGTTCAGCCACTTTAGCCCTGGTATCGTATaGGAATTTATCTGCTCCTCCAGCCACGGGCGCATT | + |
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Preference number: 6 (lower is better) Translates to: FSLFSHFSPGIV*EFICSSSHGRI Trigger: AATGCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATACGATACCAGGGCTAAAGTGGCTGAACAAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034041.9 ENSMUST00000207571.3 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210218.2 ENSMUST00000210284.2 |
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| CDS TCA 72 bp | AAGGTCGTTCGGATAAGGGCAGCATCCGGTAGACTCTaGAGGCGTTGTTTCCTTTCTTTATGCTTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: KVVRIRAASGRL*RRCFLSLCFCP Trigger: AGGACAGAAGCATAAAGAAAGGAAACAACGCCTTCAGAGTCTACCGGATGCTGCCCTTATCCGAACGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 ENSMUST00000208433.2 ENSMUST00000210284.2 |
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| CDS CAA 90 bp | CACTTCTACAACCTGGCAGATGTCTGGCGGGTTAGTGACGATCTCTaGATCTTCAATGTTGCTGTCCAGATGGGACTGTCCTACAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: HFYNLADVWRVSDDL*IFNVAVQMGLSYNY Trigger: ATAGTTGTAGGACAGTCCCATCTGGACAGCAACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAGGTTGTAGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 |
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| CDS CCA 72 bp | TGTCCTTCACTTCCTCAATGTCGGGCAGGGAATTCATaGCACATCGAAAATTTGCTTTCCATGTTTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CPSLPQCRAGNS*HIENLLSMFLD Trigger: ATCCAAAAACATGGAAAGCAAATTTTCGATGTGCCATGAATTCCCTGCCCGACATTGAGGAAGTGAAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210284.2 |
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| CDS TCA 72 bp | AGAAAAGCCACTTACTCCATTACTAAGCCCCAAAGATaGCTCAACTGGTTCTTGCTTGATGTGCTTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RKATYSITKPQR*LNWFLLDVLNS Trigger: AGAGTTAAGCACATCAAGCAAGAACCAGTTGAGTCATCTTTGGGGCTTAGTAATGGAGTAAGTGGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 |
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| CDS CCA 72 bp | GGCACATCGAAAATTTGCTTTCCATGTTTTTGGATCTaGTTTATCTATTCCTGGTTGATGCTTTCCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: GTSKICFPCFWI*FIYSWLMLSCM Trigger: CATACAGGAAAGCATCAACCAGGAATAGATAAACCAGATCCAAAAACATGGAAAGCAAATTTTCGATGTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000034041.9 ENSMUST00000207105.2 ENSMUST00000207571.3 ENSMUST00000208433.2 ENSMUST00000208507.2 ENSMUST00000210284.2 |
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