Pregenerated sensors for IRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018899Ensembl transcript IDs: ENSMUST00000019043.13, ENSMUST00000108920.10, ENSMUST00000108922.9, ENSMUST00000123376.8, ENSMUST00000133291.3, ENSMUST00000138913.8, ENSMUST00000140866.9, ENSMUST00000142221.9
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTaGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGACCCTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: YRASSRASAMLFCGR*SIPLRASPAIRPSL Trigger: TAGAGAGGGTCTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR TCA 90 bp | CCAGCTTCACCTCACAAGAAAACTCAGACTCTGCCTCCTAAGCCCTaGGAGCCCACTGACCCAAGGAGGATGGTCCCCTGTTTGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: PASPHKKTQTLPPKP*EPTDPRRMVPCLQW Trigger: CCACTGCAAACAGGGGACCATCCTCCTTGGGTCAGTGGGCTCTCAGGGCTTAGGAGGCAGAGTCTGAGTTTTCTTGTGAGGTGAAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR TCA 90 bp | GGCAGGCAGAGCTCTTTGAGTTTGAGGCCAGCCTGGTCTACACAGTaGGTTCCAGGAAAGCCACGGATACACTGTGGGGCGCTGTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GRQSSLSLRPAWSTQ*VPGKPRIHCGALSQ Trigger: TTGAGACAGCGCCCCACAGTGTATCCGTGGCTTTCCTGGAACTCACTGTGTAGACCAGGCTGGCCTCAAACTCAAAGAGCTCTGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR CCA 90 bp | TTGACGAGTGTCAGTACCCAGCAAGACCAGCAGCACAGCAGGCCCTaGGGACATTGCCTGCACTGTTGTCTAAATGGTCAGTGTCACACC | + |
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Preference number: 1 (lower is better) Translates to: LTSVSTQQDQQHSRP*GHCLHCCLNGQCHT Trigger: GGTGTGACACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGCTGGTCTTGCTGGGTACTGACACTCGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR GCA 90 bp | GTCAGTACCCAGCAAGACCAGCAGCACAGCAGGCCCTGGGGACATTaGCTGCACTGTTGTCTAAATGGTCAGTGTCACACCAATTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: VSTQQDQQHSRPWGH*LHCCLNGQCHTNCL Trigger: CAGACAATTGGTGTGACACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGCTGGTCTTGCTGGGTACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR CCA 90 bp | TTCCCTTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTaGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FPSHFTGLGTIPGLG*EGQQFFGNRTHLVQ Trigger: TTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGATCCCAGGGCTCGGTTaGGAAGGGCAGCAGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKIPGLG*EGQQFF Trigger: AAAGAACTGCTGCCCTTCCCAACCGAGCCCTGGGAT...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | CCAAAAACCCAGCCGGAGAGATGGCTCAGCAGTGAAGAGCACACTGGCTGCTCTCATGTCCCTGTGGCATaGCGCCCCCTCCTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PKTQPERWLSSEEHTGCSHVPVA*RPLLLP Trigger: TGGCAGGAGGAGGGGGCGTCATGCCACAGGGACATG...AGAGCAGCCAGTGTGCTCTTCACTGCTGAGCCATCTCTCCGGCTGGGTTTTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGCCCTTCACATTTCACTaGCTTGGGAACCATCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKPFTFH*LGNHPR Trigger: CCTGGGATGGTTCCCAAGCCAGTGAAATGTGAAGGG...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTGCAAAGGCCTAGACTaGGGAGAAATGTTAGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKCKGLD*GEMLVY Trigger: GTACACTAACATTTCTCCCCAGTCTAGGCCTTTGCA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGTATCACAGCCACCATaGTGCCAAGGCCTAACTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSRASAMLFCGRWSIPLRVSQPP*CQGLTH Trigger: GTGAGTTAGGCCTTGGCATCATGGTGGCTGTGATAC...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR GCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGAGTGGGACTATGCTTTaGCATGTGTCAAGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: YALLWALVYSPQGQPSDKSGTML*HVSRGP Trigger: TGGGCCCCTTGACACATGGCAAAGCATAGTCCCACT...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR GCA 90 bp | GCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGAAAACTCAGACTCTaGCTCCTAAGCCCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AMLFCGRWSIPLRASPAIRKLRL*LLSPES Trigger: GCTCTCAGGGCTTAGGAGGCAGAGTCTGAGTTTTCT...TATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGGCCCTGAGAGCCCACTaGCCCAAGGAGGATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLALRAH*PKEDGP Trigger: GGGACCATCCTCCTTGGGTCAGTGGGCTCTCAGGGC...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGCCCTGAGAGCCCACTaGCCCAAGGAGGATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: ASPAIRPSLCNKAFKKLEALRAH*PKEDGP Trigger: GGGACCATCCTCCTTGGGTCAGTGGGCTCTCAGGGC...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | TACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTGATGACTCCTGTCCATaGCCTCTGCCTTACACCTCA | + |
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Preference number: 2 (lower is better) Translates to: YRASSRASAMLFCGRWSIDDSCP*PLPYTS Trigger: TGAGGTGTAAGGCAGAGGCCATGGACAGGAGTCATC...AATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGCTCTTCTGTGGGCGCTaGTCTATTCCCCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLLFCGR*SIPLRA Trigger: GGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAG...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR CAA 90 bp | CTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTaGACGAGTGTCAGTACCCAGCAAGACCAGCAGCACAGCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LNVSLDTFSATQFSG*TSVSTQQDQQHSRP Trigger: GGGCCTGCTGTGCTGCTGGTCTTGCTGGGTACTGACACTCGTCAAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTGAGTCCAAACCACAGGCCCTGGGGACATTaGCTGCACTGTTGTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: VLSFSHSAPNRFQVSPNHRPWGH*LHCCLN Trigger: ATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCT...GTGGTTTGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGCTGACCCAAGGAGGATaGTCCCCTGTTTGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLLTQGG*SPVCSG Trigger: CCCACTGCAAACAGGGGACCATCCTCCTTGGGTCAG...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGACAGACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAATTTTCAGCACCACATaGCAGCTTACAGCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ADRQLGPKSSKSTPKPAGIFSTT*QLTAVC Trigger: ACAGACAGCTGTAAGCTGCCATGTGGTGCTGAAAAT...TCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGTCTGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGCTCTTAGTGTCTCGGCTGGACTTGGACTTTCTCTCTTTCCTCTGGTTCCCCGCACAGCAGAGCTaGCCTTGTTCCTACTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: VLLLVSRLDLDFLSFLWFPAQQS*PCSYSD Trigger: ATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGG...GAACCAGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACACTAAGAGCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCCTGACCCAAGGAGGATaGTCCCCTGTTTGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTLTQGG*SPVCSG Trigger: CCCACTGCAAACAGGGGACCATCCTCCTTGGGTCAG...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR CAA 90 bp | TGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATaGTCTCCTAGTACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: WEGQQFFGNRTHLVQ*SPSTEPALGPVLCS Trigger: AGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | CATTCCGTCCTGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTGAGTCCAACTGGCTGCTCTCCCTaGGGATCCAAATTCAATTTT | + |
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Preference number: 2 (lower is better) Translates to: HSVLSFSHSAPNRFQVSPTGCSP*GSKFNF Trigger: AAAATTGAATTTGGATCCTCAGGGAGAGCAGCCAGT...TGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACAGGACGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGAGTGGGACTATGCTTTaGCATGTGTCAAGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLSGTML*HVSRGP Trigger: TGGGCCCCTTGACACATGGCAAAGCATAGTCCCACT...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCGTATCACAGCCACCATaGTGCCAAGGCCTAACTCAC | + |
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Preference number: 2 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTVSQPP*CQGLTH Trigger: GTGAGTTAGGCCTTGGCATCATGGTGGCTGTGATAC...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATaGCCTCTGCCTTACACCTCA | + |
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Preference number: 2 (lower is better) Translates to: ASPAIRPSLCNKAFKKLEDDSCP*PLPYTS Trigger: TGAGGTGTAAGGCAGAGGCCATGGACAGGAGTCATC...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTGAGTCCAAACCACGCACTGTTGTCTAAATaGTCAGTGTCACACCAATTG | + |
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Preference number: 2 (lower is better) Translates to: VLSFSHSAPNRFQVSPNHALLSK*SVSHQL Trigger: CAATTGGTGTGACACTGACCATTTAGACAACAGTGC...GTGGTTTGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR TCA 90 bp | CAATTTCCAGAGGATCTGACACCCTTACATAGACATACATTCAGGCACATGAAGGCAAATGAGTATAAATaGGCATGTCCCTGTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: QFPEDLTPLHRHTFRHMKANEYK*ACPCGM Trigger: CATGCCACAGGGACATGCTCATTTATACTCATTTGC...CTTCATGTGCCTGAATGTATGTCTATGTAAGGGTGTCAGATCCTCTGGAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGATAAGACCCTCTCTATaGAACAAGGCTTTTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLIRPSL*NKAFKK Trigger: CTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTAT...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR CAA 90 bp | CAGGTGAGTCCAAACCACAGTCACCTGGGGCGATTCAAACTTTTCTaGAAATTAAACATCAAGTTCCTGAATGTATCTCTGGACACATTT | + |
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Preference number: 2 (lower is better) Translates to: QVSPNHSHLGRFKLF*KLNIKFLNVSLDTF Trigger: AAATGTGTCCAGAGATACATTCAGGAACTTGATGTTTAATTTCAAGAAAAGTTTGAATCGCCCCAGGTGACTGTGGTTTGGACTCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTCAATTGTCTGTTGTTTaGAATGGTTCCTGTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: QVPECISGHIFSYSVLRLQLSVV*NGSCLL Trigger: GAGCAAACAGGAACCATTTCAAACAACAGACAATTG...AAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | AACATCAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGAAATGGTTCCTGTTTaGTCAACAGAACCAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: NIKFLNVSLDTFSATQFSEMVPV*STEPTG Trigger: GCCTGTTGGTTCTGTTGAGCAAACAGGAACCATTTC...TGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACAATAAGACCCTCTCTATaGAACAAGGCTTTTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTIRPSL*NKAFKK Trigger: CTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTAT...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR-3UTR CCA 90 bp | AACATCAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAAAAAACTCCCTTCCGTaGCAAATGAGTATAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: NIKFLNVSLDTFSATQFSKNSLP*QMSINE Trigger: CTCATTTATACTCATTTGCCACGGAAGGGAGTTTTT...TGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTGATGTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR GCA 72 bp | GGGGTGGCAGCATCCGGTACACCCGCACAGCAGAGCTaGCCTTGTTCCTACTCTGATCCTTCACTTCCTCGA | + |
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Preference number: 3 (lower is better) Translates to: GVAASGTPAQQS*PCSYSDPSLPR Trigger: TCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTACCGGATGCTGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
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| 3UTR CCA 72 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTaGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGA | + |
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Preference number: 3 (lower is better) Translates to: SSRASAMLFCGR*SIPLRASPAIR Trigger: TCTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR GCA 72 bp | TCTCCTAGTACAGAGCCAGCTCTAGGGCCAGTGCTATaGTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SPSTEPALGPVL*SSVGAGLFPSG Trigger: CCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTACTAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR GCA 72 bp | CCCAAGGAGGATGGTCCCCTGTTTGCAGTGGGACTATaGTTTGCCATGTGTCAAGGGGCCCACAGGAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: PKEDGPLFAVGL*FAMCQGAHRSL Trigger: TAGACTCCTGTGGGCCCCTTGACACATGGCAAAGCATAGTCCCACTGCAAACAGGGGACCATCCTCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR GCA 72 bp | CAGCAAGACCAGCAGCACAGCAGGCCCTGGGGACATTaGCTGCACTGTTGTCTAAATGGTCAGTGTCACACC | + |
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Preference number: 3 (lower is better) Translates to: QQDQQHSRPWGH*LHCCLNGQCHT Trigger: GGTGTGACACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGCTGGTCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
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| 3UTR-3UTR CAA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCAAGGATGGTCCCCTGTTaGCAGTGGGACTATGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: FTFHWLGNHPRARLGRAARMVPC*QWDYAL Trigger: CAAAGCATAGTCCCACTGCAAACAGGGGACCATCCT...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR GCA 72 bp | GGAGGATGGTCCCCTGTTTGCAGTGGGACTATGCTTTaGCATGTGTCAAGGGGCCCACAGGAGTCTAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: GGWSPVCSGTML*HVSRGPQESSF Trigger: AAAGCTAGACTCCTGTGGGCCCCTTGACACATGGCAAAGCATAGTCCCACTGCAAACAGGGGACCATCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR CCA 72 bp | CATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTaGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCAT | + |
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Preference number: 3 (lower is better) Translates to: HFTGLGTIPGLG*EGQQFFGNRTH Trigger: ATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| 3UTR TCA 72 bp | TGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTaGGTCCAAACCACAGTCACCTGGGGCGATTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CPSVIQPQTVSR*VQTTVTWGDSN Trigger: GTTTGAATCGCCCCAGGTGACTGTGGTTTGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| 3UTR TCA 72 bp | GAAATGGTTCCTGTTTGCTCAACAGAACCAACAGGCTaGATGTGTCACAGGCTGACAGACAACTGGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EMVPVCSTEPTG*MCHRLTDNWAP Trigger: TGGGGCCCAGTTGTCTGTCAGCCTGTGACACATTCAGCCTGTTGGTTCTGTTGAGCAAACAGGAACCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| 3UTR TCA 72 bp | CTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTaGCGAGTGTCAGTACCCAGCAAGACCAGCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LWTHFQLLSSQA*RVSVPSKTSST Trigger: TGTGCTGCTGGTCTTGCTGGGTACTGACACTCGTCAAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATAGGATGGTCCCCTGTTaGCAGTGGGACTATGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPAIRPSLCNKAFKKLEDRMVPC*QWDYAL Trigger: CAAAGCATAGTCCCACTGCAAACAGGGGACCATCCT...ATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CCA 72 bp | CTCCCTGAGGATCCAAATTCAATTTTCAGCACCACATaGCAGCTTACAGCTGTCTGTGACTCAATTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPEDPNSIFSTT*QLTAVCDSISR Trigger: TCTGGAAATTGAGTCACAGACAGCTGTAAGCTGCCATGTGGTGCTGAAAATTGAATTTGGATCCTCAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| 3UTR TCA 72 bp | ACCTACAAAGTTAAAGAACCAACCTCTAGGAGTTGTTaGCCTCTGACCTACACATACAAACTCAGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TYKVKEPTSRSC*PLTYTYKLRGR Trigger: CCTGCCTCTGAGTTTGTATGTGTAGGTCAGAGGTCAACAACTCCTAGAGGTTGGTTCTTTAACTTTGTAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| 3UTR TCA 72 bp | TCTAAATGGTCAGTGTCACACCAATTGTCTGTTGTTTaGAATGGTTCCTGTTTGCTCAACAGAACCAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKWSVSHQLSVV*NGSCLLNRTNR Trigger: CCTGTTGGTTCTGTTGAGCAAACAGGAACCATTTCAAACAACAGACAATTGGTGTGACACTGACCATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTCCTCTGGTTCCTGGTaGGGGGTGGCAGCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKSSGSW*GVAASG Trigger: ACCGGATGCTGCCACCCCTCACCAGGAACCAGAGGA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGGGGTCCCTGGCTCATTaGGCAAGTATCCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKGSLAH*ASIPCH Trigger: ATGGCAAGGGATACTTGCTCAATGAGCCAGGGACCC...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGTCCTCTGGTTCCTGGTaGGGGGTGGCAGCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRSSGSW*GVAASG Trigger: ACCGGATGCTGCCACCCCTCACCAGGAACCAGAGGA...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | GCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAGCAGCCTCACAGAGTTaGCCAGCAGGCTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AMLFCGRWSIPLRASPAIAASQS*PAGCPS Trigger: GGATGGACAGCCTGCTGGGCAACTCTGTGAGGCTGC...TATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGCTGGCAGGGAGTTCATaGCACAACGGAAGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKLAGSS*HNGSLP Trigger: AGGCAAACTTCCGTTGTGCCATGAACTCCCTGCCAG...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTTTCTCTCTTTCCTCTaGTTCCTGGTGAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKFLSFL*FLVRGG Trigger: GCCACCCCTCACCAGGAACCAGAGGAAAGAGAGAAA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTTGTATCGGCCTGTGTaGATGGCCCAGCTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKLYRPV*MAQLRN Trigger: GTTCCGGAGCTGGGCCATTCACACAGGCCGATACAA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTTGCGGCTTCGGAGGTaGAAGGCATGGGTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKLRLRR*KAWVTP Trigger: AGGTGTCACCCATGCCTTCCACCTCCGAAGCCGCAA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAATCGGCCTGTGTGAATaGCCCAGCTCCGGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ADRQLGPKSSKSTPKPAGIGLCE*PSSGTD Trigger: GTCTGTTCCGGAGCTGGGCCATTCACACAGGCCGAT...TCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGTCTGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | GCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATACCCTTGTTCCTACTCTaGTCCTTCACTTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: AMLFCGRWSIPLRASPAIPLFLL*SFTSSM Trigger: CATCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGG...TATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | CATGACGCCCCCTCCTCCTGCCATCTTCTTCTTGACCATAACTGGAAAGATTCGTCCTCTGGTTCCTGGTaGGGGGTGGCAGCATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDAPSSCHLLLDHNWKDSSSGSW*GVAASG Trigger: ACCGGATGCTGCCACCCCTCACCAGGAACCAGAGGA...CGAATCTTTCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | GCTGACAGACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAGGGTCCCTGGCTCATTaGGCAAGTATCCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADRQLGPKSSKSTPKPAGGSLAH*ASIPCH Trigger: ATGGCAAGGGATACTTGCTCAATGAGCCAGGGACCC...TCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGTCTGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGTTGATGTCCCAGCCGTaGTTAGCAGCGTGCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRLMSQP*LAACFH Trigger: ATGGAAGCACGCTGCTAAGCACGGCTGGGACATCAA...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGGCATGACGCCCCCTCCTCCTGCCATCTTCTTCTTGACCATAACTGGACCCGCACAGCAGAGCTaGCCTTGTTCCTACTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCGMTPPPPAIFFLTITGPAQQS*PCSYSD Trigger: ATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGG...TCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATGCCACAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGACTATGCTTTGCCATGTGTCAAGGGGCCCACAGGAGTCTAGCTTTTGCAGCCTCACAGAGTTaGCCAGCAGGCTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLCFAMCQGAHRSLAFAASQS*PAGCPS Trigger: GGATGGACAGCCTGCTGGGCAACTCTGTGAGGCTGC...AAAAGCTAGACTCCTGTGGGCCCCTTGACACATGGCAAAGCATAGTCCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTTTCTCTCTTTCCTCTaGTTCCTGGTGAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKFLSFL*FLVRGG Trigger: GCCACCCCTCACCAGGAACCAGAGGAAAGAGAGAAA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGCCAGGTAGCCCTGAGTaGTGTAACTGCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRPGSPE*CNCCGH Trigger: ATGACCACAGCAGTTACACCACTCAGGGCTACCTGG...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGCCCTTGTTCCTACTCTaGTCCTTCACTTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRPLFLL*SFTSSM Trigger: CATCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGG...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTATTCTTCATCTCCGTaGAGACATGTTGTATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKYSSSP*RHVVCL Trigger: TAGGCATACAACATGTCTTCACGGAGATGAAGAATA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | TACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCGCACAGCAGAGCTaGCCTTGTTCCTACTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRASSRASAMLFCGRWSIPAQQS*PCSYSD Trigger: ATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGG...AATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTCGATGTGTGTCGGCTaGCACTCAGACTGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKSMCVG*HSDCSK Trigger: CTTTGAACAGTCTGAGTGGCAGCCGACACACATCGA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCACCAGGTAGCCCTGAGTaGTGTAACTGCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTFHWLGNHPRARLGRAAPGSPE*CNCCGH Trigger: ATGACCACAGCAGTTACACCACTCAGGGCTACCTGG...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCACAGCAGGCCCTGGGGACATTGCCTGCACTGTTGTCTAAATGGTCAGTGCCAGGTAGCCCTGAGTaGTGTAACTGCTGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAQQALGTLPALLSKWSVPGSPE*CNCCGH Trigger: ATGACCACAGCAGTTACACCACTCAGGGCTACCTGG...CACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCAAGAGAGCTGGGTCCCTaGCTCATTGAGCAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: FTFHWLGNHPRARLGRAARELGP*LIEQVS Trigger: GGATACTTGCTCAATGAGCCAGGGACCCAGCTCTCT...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTGACAGACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGAGAGAGCTGGGTCCCTaGCTCATTGAGCAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTDNWAPRVQNQLPSRPRELGP*LIEQVS Trigger: GGATACTTGCTCAATGAGCCAGGGACCCAGCTCTCT...CGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGTCTGTCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGTTCCTCTTTGCAGCTaGAGTCTCCATAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRVPLCS*SLHRQK Trigger: CTTCTGTCTATGGAGACTTCAGCTGCAAAGAGGAAC...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGTGGCTCTTTTTCTCCTaGTTTGTATCGGCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRWLFFS*FVSACV Trigger: CACACAGGCCGATACAAAGCAGGAGAAAAAGAGCCA...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGATGTCCATCTGCATATaGCACTCAGAGAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKMSICI*HSERLL Trigger: CAGCAGTCTCTCTGAGTGGCATATGCAGATGGACAT...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCATCGATGTGTGTCGGCTaGCACTCAGACTGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFHWLGNHPRARLGRAASMCVG*HSDCSK Trigger: CTTTGAACAGTCTGAGTGGCAGCCGACACACATCGA...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | GTTCCTGGTGAGGGGTGGCAGCATCCGGTACACCCGCACAGCAGAGCTGCCCTTTGGCTCTTTTTCTCCTaGTTTGTATCGGCTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VPGEGWQHPVHPHSRAALWLFFS*FVSALL Trigger: CAATAAAGCCGATACAAAGCAGGAGAAAAAGAGCCA...AAGGGCAGCTCTGCTGTGCGGGTGTACCGGATGCTGCCACCCCTCACCAGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGGTTCCTGGTGAGGGGTaGCAGCATCCGGTACACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLVPGEG*QHPVHP Trigger: CGGGTGTACCGGATGCTGCCACCCCTCACCAGGAAC...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTGACGAGTGTCAGTACCCAGTTCCTGGTGAGGGGTaGCAGCATCCGGTACACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGHIFSYSVLRLDECQYPVPGEG*QHPVHP Trigger: CGGGTGTACCGGATGCTGCCACCCCTCACCAGGAAC...TGGGTACTGACACTCGTCAAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGTGTCTCGGCTGGACTTaGACTTTCTCTCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRASAMLFCGRWSIPLRCLGWT*TFSLSS Trigger: AGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACA...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GAACTAGCCAGCAATCAGTCCTTCATTCCGTCCTGTCCTTCAGTCATTCAGCCCTTGCGGCTTCGGAGGTaGAAGGCATGGGTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ELASNQSFIPSCPSVIQPLRLRR*KAWVTP Trigger: AGGTGTCACCCATGCCTTCCACCTCCGAAGCCGCAA...GGGCTGAATGACTGAAGGACAGGACGGAATGAAGGACTGATTGCTGGCTAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTCATCTCTTCTTTATTaGTCCAGATCAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKSSLLY*SRSALG Trigger: TCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCACAGCAGGCCCTGGGGACATTGCCTGCACTGTTGTCTAAATGGTCAGTGTGGCTCTTTTTCTCCTaGTTTGTATCGGCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQQALGTLPALLSKWSVWLFFS*FVSACV Trigger: CACACAGGCCGATACAAAGCAGGAGAAAAAGAGCCA...CACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTGGCACAACGGAAGTTTaGCTTCCATGTCTTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YRASSRASAMLFCGRWSIGTTEV*LPCLGI Trigger: GATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCC...AATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGACTATGCTTTGCCATGTGTCAAGGGGCCCACAGGAGTCTAGCTTTTCACTTCCTCGATGTCTaGCAGGGAGTTCATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AVGLCFAMCQGAHRSLAFHFLDV*QGVHGT Trigger: TGTGCCATGAACTCCCTGCCAGACATCGAGGAAGTG...AAAAGCTAGACTCCTGTGGGCCCCTTGACACATGGCAAAGCATAGTCCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCGTTCCTGGTGAGGGGTaGCAGCATCCGGTACACCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTVPGEG*QHPVHP Trigger: CGGGTGTACCGGATGCTGCCACCCCTCACCAGGAAC...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CAA 72 bp | TGTGGCATGACGCCCCCTCCTCCTGCCATCTTCTTCTaGACCATAACTGGAAAGATTCGTGATCGACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CGMTPPPPAIFF*TITGKIRDRRM Trigger: CATGCGTCGATCACGAATCTTTCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | CATTCCGTCCTGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTGAGTCCACCCTTGTTCCTACTCTaGTCCTTCACTTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSVLSFSHSAPNRFQVSPPLFLL*SFTSSM Trigger: CATCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGG...TGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACAGGACGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCGCACAAGGAATGGCCTaGATAGAGGGCGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTAQGMA*IEGGSL Trigger: GAGGCTGCCGCCCTCTATTCAGGCCATTCCTTGTGC...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | AGGCTGACAGACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGTGGTTGGAATTAATCTaGATCTCTAGCCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLTDNWAPRVQNQLPSRPWLELI*ISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCA...CGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGTCTGTCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKISPGI*LELICI Trigger: GATGCAGATTAATTCCAACCAAATCCCAGGGCTGAT...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGGATCCAGATCAGCCCTaGGATTTGGTTGGAATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YALLWALVYSPQGQPSDKDPDQP*DLVGIN Trigger: ATTAATTCCAACCAAATCCCAGGGCTGATCTGGATC...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGGCATGACGCCCCCTCCTCCTGCCATCTTCTTCTTGACCATAACTGGACCATGTCTTGGGATCTaGCTCTTTTTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCGMTPPPPAIFFLTITGPCLGI*LFFSCF Trigger: AAAGCAGGAGAAAAAGAGCCAGATCCCAAGACATGG...TCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATGCCACAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | CCGGTACACCCGCACAGCAGAGCTGCCCTTGTTCCTACTCTGATCCTTCACTTCCCATGTCTTGGGATCTaGCTCTTTTTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVHPHSRAALVPTLILHFPCLGI*LFFSCF Trigger: AAAGCAGGAGAAAAAGAGCCAGATCCCAAGACATGG...GAAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTACCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CCA 90 bp | GCACACTGGCTGCTCTCCCTGAGGATCCAAATTCAATTTTCAGCACCACATGGCCTGGCAGGGAGTTCATaGCACAACGGAAGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHWLLSLRIQIQFSAPHGLAGSS*HNGSLP Trigger: AGGCAAACTTCCGTTGTGCCATGAACTCCCTGCCAG...GCCATGTGGTGCTGAAAATTGAATTTGGATCCTCAGGGAGAGCAGCCAGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | ACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAAGACCTACTGTCTCGGCTGGACTTaGACTTTCTCTCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGPQEFKINSQAGRKTYCLGWT*TFSLSS Trigger: AGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACA...GTAGGTCTTCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | GTACACCCGCACAGCAGAGCTGCCCTTGTTCCTACTCTGATCCTTCACTTCCTCTGGTTGGAATTAATCTaGATCTCTAGCCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHPHSRAALVPTLILHFLWLELI*ISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCA...GAGGAAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR GCA 90 bp | CATGACGCCCCCTCCTCCTGCCATCTTCTTCTTGACCATAACTGGAAAGATTCGGGCACAACGGAAGTTTaGCTTCCATGTCTTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HDAPSSCHLLLDHNWKDSGTTEV*LPCLGI Trigger: GATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCC...CGAATCTTTCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTAGTGTCTCGGCTGGACTTGGACTTTCTCTCTTTCCTCTGGTTCCTGGTGGGCACAACGGAAGTTTaGCTTCCATGTCTTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLVSRLDLDFLSFLWFLVGTTEV*LPCLGI Trigger: GATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCC...CACCAGGAACCAGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACACTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTGTCCTTCAGTCATTCAGCCCCAAACCGTTTCCAGGTGAGTCCAAACCACATGTCCATCTGCATATaGCACTCAGAGAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFSHSAPNRFQVSPNHMSICI*HSERLL Trigger: CAGCAGTCTCTCTGAGTGGCATATGCAGATGGACAT...GTGGTTTGGACTCACCTGGAAACGGTTTGGGGCTGAATGACTGAAGGACAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | GCACACTGGCTGCTCTCCCTGAGGATCCAAATTCAATTTTCAGCACCACATGGCTCGATGTGTGTCGGCTaGCACTCAGACTGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHWLLSLRIQIQFSAPHGSMCVG*HSDCSK Trigger: CTTTGAACAGTCTGAGTGGCAGCCGACACACATCGA...GCCATGTGGTGCTGAAAATTGAATTTGGATCCTCAGGGAGAGCAGCCAGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCAATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTFHWLGNHPRARLGRAAISPGI*LELICI Trigger: GATGCAGATTAATTCCAACCAAATCCCAGGGCTGAT...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAATCGGCCTGTGTGAATaGCCCAGCTCCGGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPAIRPSLCNKAFKKLEIGLCE*PSSGTD Trigger: GTCTGTTCCGGAGCTGGGCCATTCACACAGGCCGAT...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCACCACATGGCAGCTTACAGCTGTCTGTGACTCAATTTCCAGAGGATCTGTTTCTCTCTTTCCTCTaGTTCCTGGTGAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPHGSLQLSVTQFPEDLFLSFL*FLVRGG Trigger: GCCACCCCTCACCAGGAACCAGAGGAAAGAGAGAAA...CAGATCCTCTGGAAATTGAGTCACAGACAGCTGTAAGCTGCCATGTGGTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGACTATGCTTTGCCATGTGTCAAGGGGCCCACAGGAGTCTAGCTTTTTGTCTCGGCTGGACTTaGACTTTCTCTCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVGLCFAMCQGAHRSLAFCLGWT*TFSLSS Trigger: AGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACA...AAAAGCTAGACTCCTGTGGGCCCCTTGACACATGGCAAAGCATAGTCCCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAATTGCGGCTTCGGAGGTaGAAGGCATGGGTGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPAIRPSLCNKAFKKLELRLRR*KAWVTP Trigger: AGGTGTCACCCATGCCTTCCACCTCCGAAGCCGCAA...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CAA 72 bp | TCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTaGACGAGTGTCAGTACCCAGCAAGACCAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDTFSATQFSG*TSVSTQQDQQH Trigger: GTGCTGCTGGTCTTGCTGGGTACTGACACTCGTCAAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACATTGTATCGGCCTGTGTaGATGGCCCAGCTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTLYRPV*MAQLRN Trigger: GTTCCGGAGCTGGGCCATTCACACAGGCCGATACAA...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATGACGCACAAGGAATGGCCTaGATAGAGGGCGGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAIRPSLCNKAFKKLEDDAQGMA*IEGGSL Trigger: GAGGCTGCCGCCCTCTATTCAGGCCATTCCTTGTGC...GTCATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TCCGGTACACCCGCACAGCAGAGCTGCCCTTGTTCCTACTCTGATCCTTCACTTATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTPAQQSCPCSYSDPSLISPGI*LELICI Trigger: GATGCAGATTAATTCCAACCAAATCCCAGGGCTGAT...AAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTACCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGCACTTCCTCGATGTCTaGCAGGGAGTTCATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLHFLDV*QGVHGT Trigger: TGTGCCATGAACTCCCTGCCAGACATCGAGGAAGTG...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGAGAGAGCTGGGTCCCTaGCTCATTGAGCAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLRELGP*LIEQVS Trigger: GGATACTTGCTCAATGAGCCAGGGACCCAGCTCTCT...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CAA 72 bp | TTCCTCTTGGTTTTGCTCTTAGTGTCTCGGCTGGACTaGGACTTTCTCTCTTTCCTCTGGTTCCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVLLLVSRLD*DFLSFLWFLVR Trigger: CCTCACCAGGAACCAGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACACTAAGAGCAAAACCAAGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACAGGGTCCCTGGCTCATTaGGCAAGTATCCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTGSLAH*ASIPCH Trigger: ATGGCAAGGGATACTTGCTCAATGAGCCAGGGACCC...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCACCACATGGCAGCTTACAGCTGTCTGTGACTCAATTTCCAGAGGATCTGAGCAGCGTGCTTCCATaGAATCTGGAAGATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAPHGSLQLSVTQFPEDLSSVLP*NLEDHL Trigger: GAGATGATCTTCCAGATTCCATGGAAGCACGCTGCT...CAGATCCTCTGGAAATTGAGTCACAGACAGCTGTAAGCTGCCATGTGGTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATATCGGCCTGTGTGAATaGCCCAGCTCCGGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPAIRPSLCNKAFKKLEDIGLCE*PSSGTD Trigger: GTCTGTTCCGGAGCTGGGCCATTCACACAGGCCGAT...ATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAACTGGCAGGGAGTTCATaGCACAACGGAAGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPAIRPSLCNKAFKKLELAGSS*HNGSLP Trigger: AGGCAAACTTCCGTTGTGCCATGAACTCCCTGCCAG...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CAA 72 bp | CAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATaGTCTCCTAGTACAGAGCCAGCTCTAGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQFFGNRTHLVQ*SPSTEPALGPV Trigger: CACTGGCCCTAGAGCTGGCTCTGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CATGACGCCCCCTCCTCCTGCCATCTTCTTCTTGACCATAACTGGAAAGATTCGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HDAPSSCHLLLDHNWKDSISPGI*LELICI Trigger: GATGCAGATTAATTCCAACCAAATCCCAGGGCTGAT...CGAATCTTTCCAGTTATGGTCAAGAAGAAGATGGCAGGAGGAGGGGGCGTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGAGCAGCGTGCTTCCATaGAATCTGGAAGATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLSSVLP*NLEDHL Trigger: GAGATGATCTTCCAGATTCCATGGAAGCACGCTGCT...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGCCATGTCTTGGGATCTaGCTCTTTTTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLPCLGI*LFFSCF Trigger: AAAGCAGGAGAAAAAGAGCCAGATCCCAAGACATGG...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCTCATCTCTTCTTTATTaGTCCAGATCAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTSSLLY*SRSALG Trigger: TCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGA...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATGGCACAACGGAAGTTTaGCTTCCATGTCTTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPAIRPSLCNKAFKKLEDGTTEV*LPCLGI Trigger: GATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCC...ATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACAATGTCCATCTGCATATaGCACTCAGAGAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTMSICI*HSERLL Trigger: CAGCAGTCTCTCTGAGTGGCATATGCAGATGGACAT...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCCCATGTCTTGGGATCTaGCTCTTTTTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTPCLGI*LFFSCF Trigger: AAAGCAGGAGAAAAAGAGCCAGATCCCAAGACATGG...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTGTTCCTCTTTGCAGCTaGAGTCTCCATAGACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPECISGHIFSYSVLRLVPLCS*SLHRQK Trigger: CTTCTGTCTATGGAGACTTCAGCTGCAAAGAGGAAC...AAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTATTCTTCATCTCCGTaGAGACATGTTGTATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLYSSSP*RHVVCL Trigger: TAGGCATACAACATGTCTTCACGGAGATGAAGAATA...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACATGGTTGGAATTAATCTaGATCTCTAGCCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTWLELI*ISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCA...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATGACAGCAGCGTGCTTCCATaGAATCTGGAAGATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAIRPSLCNKAFKKLEDDSSVLP*NLEDHL Trigger: GAGATGATCTTCCAGATTCCATGGAAGCACGCTGCT...GTCATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CCA 90 bp | AACATCAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCACACTTCCTCGATGTCTaGCAGGGAGTTCATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NIKFLNVSLDTFSATQFSHFLDV*QGVHGT Trigger: TGTGCCATGAACTCCCTGCCAGACATCGAGGAAGTG...TGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTTCATCTCTTCTTTATTaGTCCAGATCAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVPECISGHIFSYSVLRLSSLLY*SRSALG Trigger: TCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGA...AAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATTGGTTGGAATTAATCTaGATCTCTAGCCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPAIRPSLCNKAFKKLEDWLELI*ISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCA...ATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| 3UTR CAA 72 bp | CCAAACCACAGTCACCTGGGGCGATTCAAACTTTTCTaGAAATTAAACATCAAGTTCCTGAATGTATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNHSHLGRFKLF*KLNIKFLNVSL Trigger: CAGAGATACATTCAGGAACTTGATGTTTAATTTCAAGAAAAGTTTGAATCGCCCCAGGTGACTGTGGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGGGCAGCCTCACAGAGTaGCCCAGCAGGCTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YALLWALVYSPQGQPSDKGSLTE*PSRLSI Trigger: GATGGACAGCCTGCTGGGCAACTCTGTGAGGCTGCC...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTGGCACAACGGAAGTTaGCCTTCCATGTCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKWHNGS*PSMSWD Trigger: ATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCCA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGCCACACAGCTTCCTCTaGGTTTTGCTCTTAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKPHSFL*VLLLVS Trigger: AGACACTAAGAGCAAAACCAAGAGGAAGCTGTGTGG...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGGATCAGCCCTGGGATTaGGTTGGAATTAATCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKDQPWD*VGINLH Trigger: ATGCAGATTAATTCCAACCAAATCCCAGGGCTGATC...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | GCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGACAGGCATCCTTGTaGATGTCCCAGCCGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AMLFCGRWSIPLRASPAIRQASL*MSQPCL Trigger: TAAGCACGGCTGGGACATCAACAAGGATGCCTGTCT...TATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCCTGCTGAGGACTGCCAAGGCCTGAGGAGACAGCAGGCACCAGGCAAGTTTGCCTTCCATGTCTaGGGATCTGGCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPAEDCQGLRRQQAPGKFAFHV*GSGSFS Trigger: AGAAAAAGAGCCAGATCCCAAGACATGGAAGGCAAA...CTTGCCTGGTGCCTGCTGTCTCCTCAGGCCTTGGCAGTCCTCAGCAGGCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGGTGGCAGCATCCGGTACACCCGCACAGCAGAGCTGCCCTTGTTCAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVRGGSIRYTRTAELPLFSPGIW*ELICIS Trigger: AGAGATGCAGATTAATTCCAACCAAATCCCAGGGCT...GAACAAGGGCAGCTCTGCTGTGCGGGTGTACCGGATGCTGCCACCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTGGTGAGGGGTGGCAGCATCCGGTACACCCGCACAGCAGAGCTGCCCTTGTTTGCCTTCCATGTCTaGGGATCTGGCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLVRGGSIRYTRTAELPLFAFHV*GSGSFS Trigger: AGAAAAAGAGCCAGATCCCAAGACATGGAAGGCAAA...CAAGGGCAGCTCTGCTGTGCGGGTGTACCGGATGCTGCCACCCCTCACCAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGGTGTCTCGGCTGGACTaGGACTTTCTCTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YALLWALVYSPQGQPSDKVSRLD*DFLSFL Trigger: GAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACAC...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS TCA 90 bp | AGCATCCGGTACACCCGCACAGCAGAGCTGCCCTTGTTCCTACTCTaGTCCTTCACTTCCTCGATGTCTGGCAGGGAGTTCATGGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SIRYTRTAELPLFLL*SFTSSMSGREFMAQ Trigger: TTGTGCCATGAACTCCCTGCCAGACATCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTACCGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000140866.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAAGTGGCACAACGGAAGTTaGCCTTCCATGTCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YALLWALVYSPQGQPSDKWHNGS*PSMSWD Trigger: ATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCCA...CTTATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | TTCACATTTCACTGGCTTGGGAACCATCCCAGGGCTCGGTTGGGAAGGGCAGCAGTGTCTCGGCTGGACTaGGACTTTCTCTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTFHWLGNHPRARLGRAAVSRLD*DFLSFL Trigger: GAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACAC...TGCTGCCCTTCCCAACCGAGCCCTGGGATGGTTCCCAAGCCAGTGAAATGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | GCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGGCCAGCCCAGCGATAATCATCTCTTCTTTATaGATCCAGATCAGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AMLFCGRWSIPLRASPAIIISSL*IQISPG Trigger: CCCAGGGCTGATCTGGATCAATAAAGAAGAGATGAT...TATCGCTGGGCTGGCCCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | ACAACTGGGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAAGACCTACGTGTCTCGGCTGGACTaGGACTTTCTCTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TTGPQEFKINSQAGRKTYVSRLD*DFLSFL Trigger: GAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACAC...GTAGGTCTTCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCCCAGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTCCCCTCAGGCCACACAGCTTCCTCTaGGTTTTGCTCTTAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRASAMLFCGRWSIPLRPHSFL*VLLLVS Trigger: AGACACTAAGAGCAAAACCAAGAGGAAGCTGTGTGG...CCTGAGGGGAATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS CCA 90 bp | AAGGTCTTCGGCTATCTTCCCTTCCTCATCCTCGTCTGTTGCGGCTaGAGTTATGTCCCTTTCCATATCCAAGTCCTGACCCAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVFGYLPFLILVCCG*SYVPFHIQVLTQVA Trigger: GGCTACCTGGGTCAGGACTTGGATATGGAAAGGGACATAACTCCAGCCGCAACAGACGAGGATGAGGAAGGGAAGATAGCCGAAGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140866.9 |
||
| CDS TCA 90 bp | CATCTGCATATGCCACTCAGAGAGACTGCTGCTGACGACACACGGTaGCAGTGCTGGAGTTATGTCCCTTTCCATATCCAAGTCCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HLHMPLRETAADDTR*QCWSYVPFHIQVLT Trigger: GGTCAGGACTTGGATATGGAAAGGGACATAACTCCAGCACTGTCACCGTGTGTCGTCAGCAGCAGTCTCTCTGAGTGGCATATGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCACAGCAGGCCCTGGGGACATTGCCTGCACTGTTGTCTAAATGGTCAGTGATCATCTCTTCTTTATaGATCCAGATCAGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAQQALGTLPALLSKWSVIISSL*IQISPG Trigger: CCCAGGGCTGATCTGGATCAATAAAGAAGAGATGAT...CACTGACCATTTAGACAACAGTGCAGGCAATGTCCCCAGGGCCTGCTGTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGTCTCCTAGTACAGGCAGCCTCACAGAGTaGCCCAGCAGGCTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GQQFFGNRTHLVQLSPSTGSLTE*PSRLSI Trigger: GATGGACAGCCTGCTGGGCAACTCTGTGAGGCTGCC...TGTACTAGGAGACAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS GCA 90 bp | CCTGGCTCATTGAGCAAGTATCCCTTGCCATCGATGTGTGTCGGCTaGCACTCAGACTGTTCAAAGAGCTTCATAAGGTCTTCGGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: PGSLSKYPLPSMCVG*HSDCSKSFIRSSAI Trigger: GATAGCCGAAGACCTTATGAAGCTCTTTGAACAGTCTGAGTGGCAGCCGACACACATCGATGGCAAGGGATACTTGCTCAATGAGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 |
||
| CDS GCA 90 bp | CTTCATAAGGTCTTCGGCTATCTTCCCTTCCTCATCCTCGTCTGTTaGGGCTGGAGTTATGTCCCTTTCCATATCCAAGTCCTGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHKVFGYLPFLILVC*GWSYVPFHIQVLTQ Trigger: CTGGGTCAGGACTTGGATATGGAAAGGGACATAACTCCAGCCGCAACAGACGAGGATGAGGAAGGGAAGATAGCCGAAGACCTTATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140866.9 |
||
| CDS CCA 90 bp | GCAAAAGACTCCCATCAGGAGGTTTCCTCGAGGGCTGTCAATCTCTaGTTCCTCTTTGCAGCTGAAGTCTCCATAGACAGAAGAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKDSHQEVSSRAVNL*FLFAAEVSIDRREL Trigger: CAGCTCTCTTCTGTCTATGGAGACTTCAGCTGCAAAGAGGAACCAGAGATTGACAGCCCTCGAGGAAACCTCCTGATGGGAGTCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | TACAGAGCCAGCTCTAGGGCCAGTGCTATGCTCTTCTGTGGGCGCTGGTCTATTAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YRASSRASAMLFCGRWSISPGIW*ELICIS Trigger: AGAGATGCAGATTAATTCCAACCAAATCCCAGGGCT...AATAGACCAGCGCCCACAGAAGAGCATAGCACTGGCCCTAGAGCTGGCTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTTAGTGTCTCGGCTGGACTTGGACTTTCTCTCTTTCCTCTGGTTCCTGGTTGGCACAACGGAAGTTaGCCTTCCATGTCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ALSVSAGLGLSLFPLVPGWHNGS*PSMSWD Trigger: ATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCCA...ACCAGGAACCAGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGAGACACTAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS GCA 90 bp | CACTTCCTCGATGTCTGGCAGGGAGTTCATGGCACAACGGAAGTTTaGCTTCCATGTCTTGGGATCTGGCTCTTTTTCTCCTGCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HFLDVWQGVHGTTEV*LPCLGIWLFFSCFV Trigger: TACAAAGCAGGAGAAAAAGAGCCAGATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCCATGAACTCCCTGCCAGACATCGAGGAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000140866.9 |
||
| CDS CCA 90 bp | GGCATCCTTGTTGATGTCCCAGCCGTGCTTAGCAGCGTGCTTCCATaGAATCTGGAAGATCATCTCTTCTTTATTGATCCAGATCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GILVDVPAVLSSVLP*NLEDHLFFIDPDQP Trigger: GGGCTGATCTGGATCAATAAAGAAGAGATGATCTTCCAGATTCCATGGAAGCACGCTGCTAAGCACGGCTGGGACATCAACAAGGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
||
| CDS CCA 90 bp | ATGTTGTATGCCTATCCCAATGTCCCCTCGAGGGCTGTCAATCTCTaGTTCCTCTTTGCAGCTGAAGTCTCCATAGACAGAAGAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLYAYPNVPSRAVNL*FLFAAEVSIDRREL Trigger: CAGCTCTCTTCTGTCTATGGAGACTTCAGCTGCAAAGAGGAACCAGAGATTGACAGCCCTCGAGGGGACATTGGGATAGGCATACAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTTAAAAAGCTAGAAGATGACTCCTGTCCATGGCCTCTGCCTTACACCAGACAGGCATCCTTGTaGATGTCCCAGCCGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KAFKKLEDDSCPWPLPYTRQASL*MSQPCL Trigger: TAAGCACGGCTGGGACATCAACAAGGATGCCTGTCT...GGTGTAAGGCAGAGGCCATGGACAGGAGTCATCTTCTAGCTTTTTAAAAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAAGAGTTCAAAATCAACTCCCAAGCCGGCCGGAAGACCTACAAAGTTATTTGCCTTCCATGTCTaGGGATCTGGCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPKSSKSTPKPAGRPTKLFAFHV*GSGSFS Trigger: AGAAAAAGAGCCAGATCCCAAGACATGGAAGGCAAA...TAACTTTGTAGGTCTTCCGGCCGGCTTGGGAGTTGATTTTGAACTCTTGGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTGACGAGTGTCAGTACCCATGGCACAACGGAAGTTaGCCTTCCATGTCTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGHIFSYSVLRLDECQYPWHNGS*PSMSWD Trigger: ATCCCAAGACATGGAAGGCAAACTTCCGTTGTGCCA...TGGGTACTGACACTCGTCAAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS CCA 90 bp | TTGTTGATGTCCCAGCCGTGCTTAGCAGCGTGCTTCCATGGAATCTaGAAGATCATCTCTTCTTTATTGATCCAGATCAGCCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLMSQPCLAACFHGI*KIISSLLIQISPGI Trigger: AATCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGATCTTCCAGATTCCATGGAAGCACGCTGCTAAGCACGGCTGGGACATCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCACCACATGGCAGCTTACAGCTGTCTGTGACTCAATTTCCAGAGGATCTGAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPHGSLQLSVTQFPEDLSPGIW*ELICIS Trigger: AGAGATGCAGATTAATTCCAACCAAATCCCAGGGCT...CAGATCCTCTGGAAATTGAGTCACAGACAGCTGTAAGCTGCCATGTGGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS CCA 90 bp | TCCTGCTTTGTATCGGCTTTATTGATCCAGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATCTCTAGCCAGGGTCTCATCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SCFVSALLIQISPGI*LELICISSQGLIRI Trigger: AATGCGGATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGCCGATACAAAGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGTTGGGAAGGGCAGCAGTTCTTTGGGAATAGGACTCATTTAGTGCAATTGAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGWEGQQFFGNRTHLVQLSPGIW*ELICIS Trigger: AGAGATGCAGATTAATTCCAACCAAATCCCAGGGCT...CAATTGCACTAAATGAGTCCTATTCCCAAAGAACTGCTGCCCTTCCCAACCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCAGGCTTAGACAGGCATCCTTGTaGATGTCCCAGCCGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QVPECISGHIFSYSVLRLRQASL*MSQPCL Trigger: TAAGCACGGCTGGGACATCAACAAGGATGCCTGTCT...AAGCCTGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCCCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAATCATCTCTTCTTTATaGATCCAGATCAGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPAIRPSLCNKAFKKLEIISSL*IQISPG Trigger: CCCAGGGCTGATCTGGATCAATAAAGAAGAGATGAT...TTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGGGCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS CCA 90 bp | TGGAAGATCATCTCTTCTTTATTGATCCAGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATCTCTAGCCAGGGTCTCATCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: WKIISSLLIQISPGI*LELICISSQGLIRI Trigger: AATGCGGATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGATCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCGATAAGACCCTCTCTATGCAACAAGGCTTTTAAAAAGCTAGAAGATGACTTTGCCTTCCATGTCTaGGGATCTGGCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAIRPSLCNKAFKKLEDDFAFHV*GSGSFS Trigger: AGAAAAAGAGCCAGATCCCAAGACATGGAAGGCAAA...GTCATCTTCTAGCTTTTTAAAAGCCTTGTTGCATAGAGAGGGTCTTATCGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAAGTTCCTGAATGTATCTCTGGACACATTTTCAGCTACTCAGTTCTCACCACACAGCTTCCTCTaGGTTTTGCTCTTAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NIKFLNVSLDTFSATQFSPHSFL*VLLLVS Trigger: AGACACTAAGAGCAAAACCAAGAGGAAGCTGTGTGG...TGAGAACTGAGTAGCTGAAAATGTGTCCAGAGATACATTCAGGAACTTGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108922.9 |
||
| CDS TCA 72 bp | TACACCCGCACAGCAGAGCTGCCCTTGTTCCTACTCTaGTCCTTCACTTCCTCGATGTCTGGCAGGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: YTRTAELPLFLL*SFTSSMSGREF Trigger: GAACTCCCTGCCAGACATCGAGGAAGTGAAGGATCAGAGTAGGAACAAGGGCAGCTCTGCTGTGCGGGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000140866.9 |
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| CDS TCA 72 bp | TGTCCATCTGCATATGCCACTCAGAGAGACTGCTGCTaGCGACACACGGTGACAGTGCTGGAGTTATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CPSAYATQRDCC*RHTVTVLELCP Trigger: GGGACATAACTCCAGCACTGTCACCGTGTGTCGTCAGCAGCAGTCTCTCTGAGTGGCATATGCAGATGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 |
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| CDS TCA 72 bp | CTCGAGGGCTGTCAATCTCTGGTTCCTCTTTGCAGCTaGAGTCTCCATAGACAGAAGAGAGCTGGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LEGCQSLVPLCS*SLHRQKRAGSL Trigger: CAGGGACCCAGCTCTCTTCTGTCTATGGAGACTTCAGCTGCAAAGAGGAACCAGAGATTGACAGCCCTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 |
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| CDS CCA 72 bp | GGCTATCTTCCCTTCCTCATCCTCGTCTGTTGCGGCTaGAGTTATGTCCCTTTCCATATCCAAGTCCTGACC | + |
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Preference number: 6 (lower is better) Translates to: GYLPFLILVCCG*SYVPFHIQVLT Trigger: GGTCAGGACTTGGATATGGAAAGGGACATAACTCCAGCCGCAACAGACGAGGATGAGGAAGGGAAGATAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140866.9 |
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| CDS GCA 72 bp | GTCTTCGGCTATCTTCCCTTCCTCATCCTCGTCTGTTaGGGCTGGAGTTATGTCCCTTTCCATATCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VFGYLPFLILVC*GWSYVPFHIQV Trigger: GACTTGGATATGGAAAGGGACATAACTCCAGCCGCAACAGACGAGGATGAGGAAGGGAAGATAGCCGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140866.9 |
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| CDS CAA 72 bp | GGTCTTCGGCTATCTTCCCTTCCTCATCCTCGTCTGTaGCGGCTGGAGTTATGTCCCTTTCCATATCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: GLRLSSLPHPRL*RLELCPFPYPS Trigger: ACTTGGATATGGAAAGGGACATAACTCCAGCCGCAACAGACGAGGATGAGGAAGGGAAGATAGCCGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140866.9 |
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| CDS GCA 72 bp | ATCCAGATCAGCCCTGGGATTTGGTTGGAATTAATCTaGATCTCTAGCCAGGGTCTCATCCGCATTCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: IQISPGIWLELI*ISSQGLIRIRV Trigger: CACTCGAATGCGGATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 ENSMUST00000142221.9 |
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| CDS CAA 72 bp | GATGGAGTCCATATTCTTCATCTCCGTGAAGACATGTaGTATGCCTATCCCAATGTCCCCTCGAGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DGVHILHLREDM*YAYPNVPSRAV Trigger: GACAGCCCTCGAGGGGACATTGGGATAGGCATACAACATGTCTTCACGGAGATGAAGAATATGGACTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 |
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| CDS GCA 72 bp | TTGAGCAAGTATCCCTTGCCATCGATGTGTGTCGGCTaGCACTCAGACTGTTCAAAGAGCTTCATAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSKYPLPSMCVG*HSDCSKSFIRS Trigger: AGACCTTATGAAGCTCTTTGAACAGTCTGAGTGGCAGCCGACACACATCGATGGCAAGGGATACTTGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 |
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| CDS CCA 72 bp | TCCCAGCCGTGCTTAGCAGCGTGCTTCCATGGAATCTaGAAGATCATCTCTTCTTTATTGATCCAGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SQPCLAACFHGI*KIISSLLIQIS Trigger: GCTGATCTGGATCAATAAAGAAGAGATGATCTTCCAGATTCCATGGAAGCACGCTGCTAAGCACGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
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| CDS CAA 90 bp | TGCTTTGTATCGGCTTTATTGATCCAGATCAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCTAGCCAGGGTCTCATCCGCATTCGA | + |
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Preference number: 6 (lower is better) Translates to: CFVSALLIQISPGIW*ELICISSQGLIRIR Trigger: TCGAATGCGGATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGCCGATACAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
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| CDS CCA 72 bp | GTTGATGTCCCAGCCGTGCTTAGCAGCGTGCTTCCATaGAATCTGGAAGATCATCTCTTCTTTATTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: VDVPAVLSSVLP*NLEDHLFFIDP Trigger: TGGATCAATAAAGAAGAGATGATCTTCCAGATTCCATGGAAGCACGCTGCTAAGCACGGCTGGGACATCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
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| CDS CCA 72 bp | GTATCGGCTTTATTGATCCAGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATCTCTAGCCAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VSALLIQISPGI*LELICISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGCCGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
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| CDS CAA 72 bp | TCGGCTTTATTGATCCAGATCAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCTAGCCAGGGTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: SALLIQISPGIW*ELICISSQGLI Trigger: GATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142221.9 |
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| CDS CAA 90 bp | AAGATCATCTCTTCTTTATTGATCCAGATCAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCTAGCCAGGGTCTCATCCGCATTCGA | + |
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Preference number: 6 (lower is better) Translates to: KIISSLLIQISPGIW*ELICISSQGLIRIR Trigger: TCGAATGCGGATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGAAGAGATGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
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| CDS CCA 72 bp | ATCTCTTCTTTATTGATCCAGATCAGCCCTGGGATTTaGTTGGAATTAATCTGCATCTCTAGCCAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ISSLLIQISPGI*LELICISSQGL Trigger: GAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGAAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
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| CDS CAA 72 bp | TCTTCTTTATTGATCCAGATCAGCCCTGGGATTTGGTaGGAATTAATCTGCATCTCTAGCCAGGGTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: SSLLIQISPGIW*ELICISSQGLI Trigger: GATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATCAATAAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019043.13 ENSMUST00000108920.10 ENSMUST00000108922.9 ENSMUST00000123376.8 ENSMUST00000133291.3 ENSMUST00000138913.8 ENSMUST00000140866.9 |
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