Pregenerated sensors for IREB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032293Ensembl transcript IDs: ENSMUST00000034843.9, ENSMUST00000214023.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATaGGCAGCACAACTAAGGCACACAACAGCATGGAGCACAACGTTC | + |
|
Preference number: 1 (lower is better) Translates to: NGSSVAGGLSFPSFV*AAQLRHTTAWSTTF Trigger: GAACGTTGTGCTCCATGCTGTTGTGTGCCTTAGTTGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CCA 90 bp | CAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTaGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTATGCC | + |
|
Preference number: 1 (lower is better) Translates to: QLYFAVVYLQTWSAF*LDWSETVIWGRFYA Trigger: GGCATAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 90 bp | ATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTATaGCTTGCAGACATACTGAGACTAAGGCTAAACCTGACTTACTTT | + |
|
Preference number: 1 (lower is better) Translates to: ILAGLVRDCDLGQVL*LADILRLRLNLTYF Trigger: AAAGTAAGTCAGGTTTAGCCTTAGTCTCAGTATGTCTGCAAGGCATAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CCA 90 bp | ATACCACATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATaGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: IPHDQLYFAVVYLQT*SAFWLDWSETVIWG Trigger: GCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATGTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 90 bp | ACATGGACTAAGCATGTGATGTGGTGTAACAGATACAGATGCAACTaGAAACACATGACAGACATGCAAACAGCCGTGACCACCAAGTAT | + |
|
Preference number: 1 (lower is better) Translates to: TWTKHVMWCNRYRCN*KHMTDMQTAVTTKY Trigger: ATACTTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTATCTGTTACACCACATCACATGCTTAGTCCATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 90 bp | GTTACAGCTTTTAGTACAATCCCTGTGAAAATCCAAGCAGTGTGGTaGAAAGATGCTGTGCCTCTCATCCAAGTATTAACAGAGGTACCT | + |
|
Preference number: 1 (lower is better) Translates to: VTAFSTIPVKIQAVW*KDAVPLIQVLTEVP Trigger: AGGTACCTCTGTTAATACTTGGATGAGAGGCACAGCATCTTTTCACCACACTGCTTGGATTTTCACAGGGATTGTACTAAAAGCTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 90 bp | GTGAAAAGATGCTGTGCCTCTCATCCAAGTATTAACAGAGGTACCTaGCATCTTGGGAACCTTAAAGGAATAACTAACAATGGCAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VKRCCASHPSINRGT*HLGNLKGITNNGSS Trigger: TGAACTGCCATTGTTAGTTATTCCTTTAAGGTTCCCAAGATGGCAGGTACCTCTGTTAATACTTGGATGAGAGGCACAGCATCTTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 90 bp | ATTATCATTTACATCCATGGACGAGATAAGTATACTGAAGTTATCTaGAGTTCCATGGCAATGATTCCTGGGTCCAGCACAGAAGGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: IIIYIHGRDKYTEVI*SSMAMIPGSSTEGF Trigger: AAAGCCTTCTGTGCTGGACCCAGGAATCATTGCCATGGAACTGCAGATAACTTCAGTATACTTATCTCGTCCATGGATGTAAATGATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CCA 90 bp | GCAGACATACTGAGACTAAGGCTAAACCTGACTTACTTTACAAACTaGGAATGCCAACTGTGTCCAATTCAATTCTGGAAAGAAAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: ADILRLRLNLTYFTN*ECQLCPIQFWKEKH Trigger: GTGTTTTTCTTTCCAGAATTGAATTGGACACAGTTGGCATTCCCAGTTTGTAAAGTAAGTCAGGTTTAGCCTTAGTCTCAGTATGTCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 90 bp | GGGCTGTACCATAGGAAATATATTTTACTAATACATGATACCACATaGTCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGC | + |
|
Preference number: 1 (lower is better) Translates to: GLYHRKYILLIHDTT*SAIFCSRLSSDMEC Trigger: GCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATGTGGTATCATGTATTAGTAAAATATATTTCCTATGGTACAGCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACAACTGGTCAGAGACTGTaGTCTGGGGCAGGTTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: WQFSGRRPFLSFICMSSTTGQRL*SGAGSM Trigger: CATAGAACCTGCCCCAGATCACAGTCTCTGACCAGT...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACACATGGCAATGATTCCTaGGTCCAGCACAGAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: WQFSGRRPFLSFICMSSTHGNDS*VQHRRL Trigger: AAGCCTTCTGTGCTGGACCCAGGAATCATTGCCATG...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCTCCATTCCTGATTCAGGCTTCCACAGATTAACACACCTACACAGACAGTCTTCAGACATGGAGTaGATTCTGGCTGGACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EFSIPDSGFHRLTHLHRQSSDME*ILAGLV Trigger: GACCAGTCCAGCCAGAATGCACTCCATGTCTGAAGA...CTGTCTGTGTAGGTGTGTTAATCTGTGGAAGCCTGAATCAGGAATGGAGAATTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR TCA 90 bp | CATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTTTAGCAATGTTGCAGTTCCATGGCAATaGTTCCTGGGTCCAGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HTYRSLPQHTSHVDFSNVAVPWQ*FLGPAQ Trigger: CTGTGCTGGACCCAGGAATCATTGCCATGGAACTGC...AACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR CCA 90 bp | ATACAGATGCAACTGCAAACACATGACAGACATGCAAACAGCCGTGACCACCAAGTTTATCTTCAGACATaGAGTGCATTCTGGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IQMQLQTHDRHANSRDHQVYLQT*SAFWLD Trigger: GTCCAGCCAGAATGCACTCCATGTCTGAAGATAAAC...TTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR CCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTACATGGAGTGCATTCTaGCTGGACTGGTCAGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: DQEFSSLFLGERLREPSLTWSAF*LDWSET Trigger: AGTCTCTGACCAGTCCAGCCAGAATGCACTCCATGT...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAACACACCTACACAGACAGACACATGGTATCTACCAGAACACAGTATGGTTTACTTACTTTACAAACTaGGAATGCCAACTGTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LTHLHRQTHGIYQNTVWFTYFTN*ECQLCP Trigger: TGGACACAGTTGGCATTCCCAGTTTGTAAAGTAAGT...AAACCATACTGTGTTCTGGTAGATACCATGTGTCTGTCTGTGTAGGTGTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACAGACACATGGTATCTACCAGAACACAGTATGGTTTCAAAGTAGCAAAGTTTACAAACTGGGAATaGCAACTGTGTCCAATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TDRHMVSTRTQYGFKVAKFTNWE*QLCPIQ Trigger: TTGAATTGGACACAGTTGGCATTCCCAGTTTGTAAA...CTTTGCTACTTTGAAACCATACTGTGTTCTGGTAGATACCATGTGTCTGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTAGATACAGATGCAACTaGAAACACATGACAGACATG | + |
|
Preference number: 2 (lower is better) Translates to: DQEFSSLFLGERLREPSLRYRCN*KHMTDM Trigger: CATGTCTGTCATGTGTTTGCAGTTGCATCTGTATCT...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTACTATAGACGGAGTATaGCTTCAAAATATGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DQEFSSLFLGERLREPSLTIDGV*LQNMTD Trigger: ATCTGTCATATTTTGAAGGCATACTCCGTCTATAGT...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CAA 90 bp | ATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTaGATTTTAGCAATGTTAATAGCACCATTCGTGTATTATTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IPLILTGLFHNTLHT*ILAMLIAPFVYYLK Trigger: TTTTAAATAATACACGAATGGTGCTATTAACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | CATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTaGTCTGGGGCAGGTTCTATGCCTTGCAGACATACT | + |
|
Preference number: 3 (lower is better) Translates to: HGVHSGWTGQRL*SGAGSMPCRHT Trigger: AGTATGTCTGCAAGGCATAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | TCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATaGGCAGCACAACTAAGGCACACAACAGCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVAGGLSFPSFV*AAQLRHTTAWS Trigger: GCTCCATGCTGTTGTGTGCCTTAGTTGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 72 bp | GGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTATaGCTTGCAGACATACTGAGACTAAGGCTAAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLVRDCDLGQVL*LADILRLRLNL Trigger: CAGGTTTAGCCTTAGTCTCAGTATGTCTGCAAGGCATAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 72 bp | GCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTaGATTCTGGCTGGACTGGTCAGAGACTGTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: AIFCSRLSSDME*ILAGLVRDCDL Trigger: CAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 72 bp | AAGCATGTGATGTGGTGTAACAGATACAGATGCAACTaGAAACACATGACAGACATGCAAACAGCCGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: KHVMWCNRYRCN*KHMTDMQTAVT Trigger: GGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTATCTGTTACACCACATCACATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CCA 72 bp | GATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATaGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DQLYFAVVYLQT*SAFWLDWSETV Trigger: CACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | CTTCTGGCTGAGTTACAGCTTTTAGTACAATCCCTGTaGAAATCCAAGCAGTGTGGTGAAAAGATGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLAELQLLVQSL*KSKQCGEKMLC Trigger: GCACAGCATCTTTTCACCACACTGCTTGGATTTTCACAGGGATTGTACTAAAAGCTGTAACTCAGCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR GCA 72 bp | TGGACTAAGCATGTGATGTGGTGTAACAGATACAGATaGAACTGCAAACACATGACAGACATGCAAACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WTKHVMWCNRYR*NCKHMTDMQTA Trigger: GGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTATCTGTTACACCACATCACATGCTTAGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | TTTAGTACAATCCCTGTGAAAATCCAAGCAGTGTGGTaGAAAGATGCTGTGCCTCTCATCCAAGTATTAACA | + |
|
Preference number: 3 (lower is better) Translates to: FSTIPVKIQAVW*KDAVPLIQVLT Trigger: TGTTAATACTTGGATGAGAGGCACAGCATCTTTTCACCACACTGCTTGGATTTTCACAGGGATTGTACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CCA 72 bp | CTGAGACTAAGGCTAAACCTGACTTACTTTACAAACTaGGAATGCCAACTGTGTCCAATTCAATTCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRLRLNLTYFTN*ECQLCPIQFWK Trigger: TTTCCAGAATTGAATTGGACACAGTTGGCATTCCCAGTTTGTAAAGTAAGTCAGGTTTAGCCTTAGTCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | AAAATATTCTCAAAAGACTGTACGACTGATCATGTGTaGAGTTCTCAAGTGTTCTTCACTCACTGGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KIFSKDCTTDHV*SSQVFFTHWFG Trigger: ACCAAACCAGTGAGTGAAGAACACTTGAGAACTTCACACATGATCAGTCGTACAGTCTTTTGAGAATATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR TCA 72 bp | ACATTGTTACCAGATAAGCAAATAACTGCTTCTGGCTaGGTTACAGCTTTTAGTACAATCCCTGTGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: TLLPDKQITASG*VTAFSTIPVKI Trigger: GATTTTCACAGGGATTGTACTAAAAGCTGTAACTCAGCCAGAAGCAGTTATTTGCTTATCTGGTAACAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACACAGGCCAAGCATAACTaGCTCTGTCTCAATGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WQFSGRRPFLSFICMSSTQAKHN*LCLNAT Trigger: GGTGGCATTGAGACAGAGGCAGTTATGCTTGGCCTG...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTAATGATGCAATCACGCTaGACTCTTTTCCAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MECILAGLVRDCDLGQVLMMQSR*TLFQCL Trigger: CAAGCACTGGAAAAGAGTTCAGCGTGATTGCATCAT...TAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTAGGAAGCTTCTTAGACTaGACTTTAAGTGGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MECILAGLVRDCDLGQVLGSFLD*TLSGES Trigger: GCTCTCTCCACTTAAAGTGCAGTCTAAGAAGCTTCC...TAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACATCCAAGAGTTTTCACTaGCTCCCTCATAGCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WQFSGRRPFLSFICMSSTSKSFH*LPHSSK Trigger: TTTGCTGCTATGAGGGAGGCAGTGAAAACTCTTGGA...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | GAATTCTCCATTCCTGATTCAGGCTTCCACAGATTAACACACCTACACAGACAGACAGCAACCCTATCCTaGGGCCTTTTTGGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSIPDSGFHRLTHLHRQTATLS*GLFGPL Trigger: CAGTGGTCCAAAAAGGCCTCAGGATAGGGTTGCTGT...CTGTCTGTGTAGGTGTGTTAATCTGTGGAAGCCTGAATCAGGAATGGAGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGATGCAACTGCAAACACATGACAGACATGCAAACAGCCGTGACCACCAATCCAGGCGGGATGACTaGCACATTCTTAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQMQLQTHDRHANSRDHQSRRDD*HILKSS Trigger: GGAGCTTTTAAGAATGTGGCAGTCATCCCGCCTGGA...TTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGTATATTCACTGTGCCTaGTATGGCATAAGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQWPEAFPFLHLYEQYIHCA*YGISHH Trigger: GTGGTGGCTTATGCCATAGCAGGCACAGTGAATATA...CTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACAAAGAAAATACTTCTCTaGCAGAGAGGCCCAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WQFSGRRPFLSFICMSSTKKILL*QRGPRN Trigger: ATTCCTTGGGCCTCTCTGGCAGAGAAGTATTTTCTT...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCTCAGGTTCAGGCACTaGTTGCAAATGAAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQWPEAFPFLHLYEQLRFRH*LQMKRT Trigger: TGTCCTTTTCATTTGCAACCAGTGCCTGAACCTGAG...CTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGAAGAGTGGTCCACTGTaGGATCTGTCGGACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWKSGPL*DLSDRQ Trigger: CTGCCTGTCCGACAGATCTCACAGTGGACCACTCTT...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTCCCCGGCAGGTAGTCTaGCCTCGACATGGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSPRQVV*PRHGSF Trigger: GAAGCTTCCATGTCGAGGCCAGACTACCTGCCGGGG...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACAGATAGCACCATATTCTaGACACATGTTTGCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WQFSGRRPFLSFICMSSTDSTIF*THVCYG Trigger: ACCATAGCAAACATGTGTCCAGAATATGGTGCTATC...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | GAATTCTCCATTCCTGATTCAGGCTTCCACAGATTAACACACCTACACAGACAGAGACTTCACATCCCATaGAAACAGCACGGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSIPDSGFHRLTHLHRQRLHIP*KQHGVW Trigger: CCAGACTCCGTGCTGTTTCCATGGGATGTGAAGTCT...CTGTCTGTGTAGGTGTGTTAATCTGTGGAAGCCTGAATCAGGAATGGAGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTATGGTGCATTCTGTATTaGACATTTACTGAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MECILAGLVRDCDLGQVLWCILY*TFTEVN Trigger: ATTGACTTCAGTAAATGTGCAATACAGAATGCACCA...TAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGATGCAACTGCAAACACATGACAGACATGCAAACAGCCGTGACCACCAAAACCATCCCACTGCCTaGAGACAAACTTGTTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IQMQLQTHDRHANSRDHQNHPTA*RQTCSY Trigger: ATACGAACAAGTTTGTCTCCAGGCAGTGGGATGGTT...TTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | GAATTCTCCATTCCTGATTCAGGCTTCCACAGATTAACACACCTACACAGACAGGAGAGGCGAGATAATTaGCACGGACACAATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSIPDSGFHRLTHLHRQERRDN*HGHNHR Trigger: TCTGTGATTGTGTCCGTGCCAATTATCTCGCCTCTC...CTGTCTGTGTAGGTGTGTTAATCTGTGGAAGCCTGAATCAGGAATGGAGAATTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTAAATTGTTTTGGGAGCTaGCTTCCCAATAAACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: MECILAGLVRDCDLGQVLNCFGS*LPNKLI Trigger: AATAAGTTTATTGGGAAGCCAGCTCCCAAAACAATT...TAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGCTCCTGAGCTCCACTTaGAAAACTGAAGCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWLLSST*KTEASL Trigger: GAGAGAGGCTTCAGTTTTTCAAGTGGAGCTCAGGAG...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | ACAATGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGATTTCCTACACATGTTaGACATCCATAGCCAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: TMAVQWPEAFPFLHLYEQISYTC*TSIANY Trigger: ATAGTTGGCTATGGATGTTCAACATGTGTAGGAAAT...CTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCACTCAATAGGCTGGGATaGAGCTGGCTCTTTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISLNRLG*SWLFGK Trigger: CTTACCAAAGAGCCAGCTGCATCCCAGCCTATTGAG...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | AAATATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATAGTCTGGCCTCGACATaGAAGCTTCTTAGACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYTPHTYRSLPQHTSHVDSLAST*KLLRLH Trigger: GTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACT...ATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTGCCAACTACACTGTCTaGGAAGAGCAGGTCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQEFSSLFLGERLREPSLANYTV*EEQVRF Trigger: GAAACGGACCTGCTCTTCCCAGACAGTGTAGTTGGC...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | AAATATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTCACTGTGCCTGCTATaGCATAAGCCACCACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYTPHTYRSLPQHTSHVDSLCLL*HKPPLR Trigger: CCTTAGTGGTGGCTTATGCCATAGCAGGCACAGTGA...ATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGCTCCACTTGAAAAACTaGAGCCTCTCTCGATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHFCIIWLEAESQDTHIGLHLKN*SLSRFL Trigger: CAGAAATCGAGAGAGGCTTCAGTTTTTCAAGTGGAG...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | GAATTCTCCATTCCTGATTCAGGCTTCCACAGATTAACACACCTACACAGACAGAATACTTCCAGCGGGTaGTATATGATCTGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFSIPDSGFHRLTHLHRQNTSSG*YMICSD Trigger: GTCACTACAGATCATATATCACCCGCTGGAAGTATT...CTGTCTGTGTAGGTGTGTTAATCTGTGGAAGCCTGAATCAGGAATGGAGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | TTAACACACCTACACAGACAGACACATGGTATCTACCAGAACACAGTATGGTTTCCTACTTGCCTGAGGTaGTTTGTAATGCCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTHLHRQTHGIYQNTVWFPTCLR*FVMPRT Trigger: TGTCCTTGGCATTACAAAGCACCTCAGGCAAGTAGG...AAACCATACTGTGTTCTGGTAGATACCATGTGTCTGTCTGTGTAGGTGTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCATTTAGCCAGAAGACCTaGAGCAAGCATCACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISFSQKT*SKHHRW Trigger: CCATCTGTGATGCTTGCTGCAGGTCTTCTGGCTAAA...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGATCCTGAGGCCTTTTTaGACCACTGACAGATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWILRPF*TTDRCN Trigger: GTTGCATCTGTCAGTGGTCCAAAAAGGCCTCAGGAT...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | CATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTTTAGCAATGTTCCAGCGGGTGATATATaGTCTGTAGTGACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTYRSLPQHTSHVDFSNVPAGDI*SVVTES Trigger: AGACTCTGTCACTACAGATCATATATCACCCGCTGG...AACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAATGACCACGGATCCATaGGACAGCTTATACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISMTTDP*DSLYSL Trigger: AAGTGAGTATAAGCTGTCCCATGGATCCGTGGTCAT...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGCCTAAAGGCTCTGTCTaGAAGTCTATATTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHFCIIWLEAESQDTHIGPKGSV*KSIFTV Trigger: CACAGTGAATATAGACTTCCAGACAGAGCCTTTAGG...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAGCCTTTTTGGACCACTaGCAGATGCAACTATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISAFLDH*QMQLLN Trigger: ATTCAATAGTTGCATCTGTCAGTGGTCCAAAAAGGC...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTTGTCCCGATGGAAAATaGATTGTTTTGGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSCPDGK*IVLGAG Trigger: GCCAGCTCCCAAAACAATTCATTTTCCATCGGGACA...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGGCCTCTCTCGATTTCTaGCAAATTCTACTTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFCIIWLEAESQDTHIGASLDF*QILLLD Trigger: ATCAAGAAGTAGAATTTGGCAGAAATCGAGAGAGGC...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGTTATATGAGAATCTGTaGCAACTACACTGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHFCIIWLEAESQDTHIGLYENL*QLHCLG Trigger: TCCCAGACAGTGTAGTTGGCACAGATTCTCATATAA...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTGGTACAACTGATAACTaGAGCAATGACCACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSGTTDN*SNDHGS Trigger: GGATCCGTGGTCATTGCTGCAGTTATCAGTTGTACC...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGATGCAACTGCAAACACATGACAGACATGCAAACAGCCGTGACCACCAAAAAAAGCTTGATGTTTaGAAATGTGCCTCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQMQLQTHDRHANSRDHQKKLDV*KCASCH Trigger: ATGACAAGAGGCACATTTGCAAACATCAAGCTTTTT...TTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTAT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTACCACCTCCAGGATTTaGTGCATTCTGTATTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DQEFSSLFLGERLREPSLTTSRI*CILYCT Trigger: TGTGCAATACAGAATGCACCAAATCCTGGAGGTGGT...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAAGACTGCACTTTAAGTaGAGAGAGCTTTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISRLHFK*RELSCF Trigger: AAAGCAGGAAAGCTCTCTCCACTTAAAGTGCAGTCT...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCACCAATCCGTTCACCATaGTTATATGAGAATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISPIRSP*LYENLC Trigger: GCACAGATTCTCATATAACCATGGTGAACGGATTGG...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | CATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTTTAGCAATGTTAGCAAAATCCACCATTaGCGGTATTCCAGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HTYRSLPQHTSHVDFSNVSKIHH*RYSSEI Trigger: GATTTCACTGGAATACCGGCAATGGTGGATTTTGCT...AACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | AAATATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTTCTGGACACATGTTTaGTATGGTAGTTCTATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYTPHTYRSLPQHTSHVDFWTHV*YGSSID Trigger: GTCGATAGAACTACCATAGCAAACATGTGTCCAGAA...ATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | CATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTTTAGCAATGTTAGTCTATATTCACTGTaGCTGCTATGGCATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTYRSLPQHTSHVDFSNVSLYSL*LLWHKP Trigger: TGGCTTATGCCATAGCAGGCACAGTGAATATAGACT...AACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGTTTTCTGCTGCAACTTaGAAGCCTTTAAATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWFSAAT*KPLNPT Trigger: GGTTGGATTTAAAGGCTTCCAAGTTGCAGCAGAAAA...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | GATCAAGAGTTTAGTTCACTGTTTCTGGGTGAGAGATTAAGAGAACCTTCACTTACCTCCAGGATTTGGTaGATTCTGTATTGCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: DQEFSSLFLGERLREPSLTSRIW*ILYCTF Trigger: AAATGTGCAATACAGAATGCACCAAATCCTGGAGGT...AAGTGAAGGTTCTCTTAATCTCTCACCCAGAAACAGTGAACTAAACTCTTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR GCA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAGAGGAATTCAAGTGGTaGTATACCAATTCCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NQVPIPTILGSSLDSSISEEFKW*YTNSNQ Trigger: TTGATTGGAATTGGTATAGCACCACTTGAATTCCTC...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACAGACACATGGTATCTACCAGAACACAGTATGGTTTCAAAGTAGCAAAGCAACATTGCTCTGTTTaGTTTTCCAGTCCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TDRHMVSTRTQYGFKVAKQHCSV*FSSPKC Trigger: ACATTTTGGACTGGAAAACCAAACAGAGCAATGTTG...CTTTGCTACTTTGAAACCATACTGTGTTCTGGTAGATACCATGTGTCTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTTCAATCTGTAAAGAGTaGTCCACTGTGAGATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSSICKE*STVRSV Trigger: GACAGATCTCACAGTGGACCACTCTTTACAGATTGA...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTGAGCGTTTGTCCCGATaGAAAATGAATTGTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSERLSR*KMNCFG Trigger: CCCAAAACAATTCATTTTCCATCGGGACAAACGCTC...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR TCA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTATTCTTAAAAGCTCCTaGGCTCCACTTGAAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: IPTILGSSLDSSISTCYSILKSS*APLEKL Trigger: CAGTTTTTCAAGTGGAGCTCAGGAGCTTTTAAGAAT...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CCA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGCCATTGACTCAAGTTTaGTTTTGTCAAAACCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWPLTQV*FCQNLY Trigger: ATACAGGTTTTGACAAAACCAAACTTGAGTCAATGG...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CAA 72 bp | ATACTTACAGGTCTCTTCCACAACACACTTCACACGTaGATTTTAGCAATGTTAATAGCACCATTCGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ILTGLFHNTLHT*ILAMLIAPFVY Trigger: ATACACGAATGGTGCTATTAACATTGCTAAAATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| 3UTR CAA 72 bp | ATGTGTGAAGTTCTCAAGTGTTCTTCACTCACTGGTTaGGTAGTCCTTAAGTTTAGCATAAAAGAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: MCEVLKCSSLTG*VVLKFSIKEVL Trigger: AAGTACTTCTTTTATGCTAAACTTAAGGACTACCAAACCAGTGAGTGAAGAACACTTGAGAACTTCACACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 90 bp | CTCTCCAGAATCACACGATCCCCGGCAGGTAGTCTGGCCTCGACATaGAAGCTTCTTAGACTGCACTTTAAGTGGAGAGAGCTTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRITRSPAGSLAST*KLLRLHFKWRELSC Trigger: GCAGGAAAGCTCTCTCCACTTAAAGTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACTACCTGCCGGGGATCGTGTGATTCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 90 bp | TTCCGGCTTAGCTCTCCAGAATCACACGATCCCCGGCAGGTAGTCTaGCCTCGACATGGAAGCTTCTTAGACTGCACTTTAAGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FRLSSPESHDPRQVV*PRHGSFLDCTLSGE Trigger: CTCTCCACTTAAAGTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACTACCTGCCGGGGATCGTGTGATTCTGGAGAGCTAAGCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 90 bp | CCAACTCCCCACCCAAGAATCCCCAATCCGTTCACCATGGTTATATaGGAATCTGTGCCAACTACACTGTCTGGGAAGAGCAGGTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTPHPRIPNPFTMVI*ESVPTTLSGKSRSV Trigger: AACGGACCTGCTCTTCCCAGACAGTGTAGTTGGCACAGATTCTCATATAACCATGGTGAACGGATTGGGGATTCTTGGGTGGGGAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 90 bp | ATCTGTAAAGAGTGGTCCACTGTGAGATCTGTCGGACAGGCAGGGTaGACTTTCTTAGGATCACCTCCAAGAGTTTTCACTGCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICKEWSTVRSVGQAG*TFLGSPPRVFTASL Trigger: GAGGGAGGCAGTGAAAACTCTTGGAGGTGATCCTAAGAAAGTCCACCCTGCCTGTCCGACAGATCTCACAGTGGACCACTCTTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 90 bp | CTGCTATGGCATAAGCCACCACTAAGGGCGGAGAGGCGAGATAATTaGCACGGACACAATCACAGAGACGGCCTTCGAAATGTTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLWHKPPLRAERRDN*HGHNHRDGLRNVCF Trigger: GAAACAAACATTTCGAAGGCCGTCTCTGTGATTGTGTCCGTGCCAATTATCTCGCCTCTCCGCCCTTAGTGGTGGCTTATGCCATAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS GCA 90 bp | ACAGGCAGGGTGGACTTTCTTAGGATCACCTCCAAGAGTTTTCACTaGCTCCCTCATAGCAGCAAAATCCACCATTGCCGGTATTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRVDFLRITSKSFH*LPHSSKIHHCRYSS Trigger: ACTGGAATACCGGCAATGGTGGATTTTGCTGCTATGAGGGAGGCAGTGAAAACTCTTGGAGGTGATCCTAAGAAAGTCCACCCTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 90 bp | ACGGAGTCTGGAGCTTCTAACGAATTCCACCGTTTATTTCCCATCTaGCAGGTCCTAACCATCTGTAACTCCAGCTCCAGGAGTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TESGASNEFHRLFPI*QVLTICNSSSRSSE Trigger: CTCAGAACTCCTGGAGCTGGAGTTACAGATGGTTAGGACCTGGCAGATGGGAAATAAACGGTGGAATTCGTTAGAAGCTCCAGACTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214023.2 |
||
| CDS CCA 90 bp | TACCTAAAGGCTCTGTCTGGAAGTCTATATTCACTGTGCCTGCTATaGCATAAGCCACCACTAAGGGCGGAGAGGCGAGATAATTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLKALSGSLYSLCLL*HKPPLRAERRDNWH Trigger: GTGCCAATTATCTCGCCTCTCCGCCCTTAGTGGTGGCTTATGCCATAGCAGGCACAGTGAATATAGACTTCCAGACAGAGCCTTTAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTGCATTCTGGCTGGACTGGTCAGAGACTGTGATCTGGGGCAGGTTCTATGTCGTAGTGTCACATaGTCAACAGGGAAAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MECILAGLVRDCDLGQVLCRSVT*STGKKL Trigger: CAGCTTTTTCCCTGTTGACAATGTGACACTACGACA...TAGAACCTGCCCCAGATCACAGTCTCTGACCAGTCCAGCCAGAATGCACTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACACCAATAGGACCCGTATaGAGTAAGGCAGAATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: WQFSGRRPFLSFICMSSTPIGPV*SKAEYH Trigger: ATGATATTCTGCCTTACTCAATACGGGTCCTATTGG...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 90 bp | TTAGCAGCAGCACTACTCCTAGCAATACTTCCAGCGGGTGATATATaGTCTGTAGTGACAGAGTCTCCCAAATACAACAGGACATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAAALLLAILPAGDI*SVVTESPKYNRTWA Trigger: TGCCCATGTCCTGTTGTATTTGGGAGACTCTGTCACTACAGATCATATATCACCCGCTGGAAGTATTGCTAGGAGTAGTGCTGCTGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGTCCAGCCACGCCTACTaGCCTGAGGTGCTTTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PHFCIIWLEAESQDTHIGSSHAY*PEVLCN Trigger: ATTACAAAGCACCTCAGGCAAGTAGGCGTGGCTGGA...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACAAATAAGCCTCCATGTTaGTACAAAGTTATCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: WQFSGRRPFLSFICMSSTNKPPC*YKVIST Trigger: CGTGGAGATAACTTTGTACAAACATGGAGGCTTATT...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 90 bp | ACCCAAGAATCCCCAATCCGTTCACCATGGTTATATGAGAATCTGTaGCAACTACACTGTCTGGGAAGAGCAGGTCCGTTTCTTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TQESPIRSPWLYENL*QLHCLGRAGPFLQK Trigger: TTTTTGAAGAAACGGACCTGCTCTTCCCAGACAGTGTAGTTGGCACAGATTCTCATATAACCATGGTGAACGGATTGGGGATTCTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 90 bp | GGTGCATTCTGTATTGCACATTTACTGAAGTCAATCTGTAAAGAGTaGTCCACTGTGAGATCTGTCGGACAGGCAGGGTGGACTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GAFCIAHLLKSICKE*STVRSVGQAGWTFL Trigger: TAAGAAAGTCCACCCTGCCTGTCCGACAGATCTCACAGTGGACCACTCTTTACAGATTGACTTCAGTAAATGTGCAATACAGAATGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGTTCAGTGGCCGGAGGCCTTTCCTTTCCTTCATTTGTATGAGCAGCACATATTTCCTACACATGTaGAACATCCATAGCCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: WQFSGRRPFLSFICMSSTYFLHM*NIHSQL Trigger: TAGTTGGCTATGGATGTTCAACATGTGTAGGAAATA...TGTGCTGCTCATACAAATGAAGGAAAGGAAAGGCCTCCGGCCACTGAACTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 90 bp | CAAATACTTAGCAGCAGCACTACTCCTAGCAATACTTCCAGCGGGTaGTATATGATCTGTAGTGACAGAGTCTCCCAAATACAACAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QILSSSTTPSNTSSG*YMICSDRVSQIQQD Trigger: GTCCTGTTGTATTTGGGAGACTCTGTCACTACAGATCATATATCACCCGCTGGAAGTATTGCTAGGAGTAGTGCTGCTGCTAAGTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 90 bp | AGCAAGCATCACAGATGGATTGCAATTATTGGTACAACTGATAACTaGAGCAATGACCACGGATCCATGGGACAGCTTATACTCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKHHRWIAIIGTTDN*SNDHGSMGQLILTS Trigger: GGAAGTGAGTATAAGCTGTCCCATGGATCCGTGGTCATTGCTGCAGTTATCAGTTGTACCAATAATTGCAATCCATCTGTGATGCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGATGCAACTGCAAACACATGACAGACATGCAAACAGCCGTGACCACCAATTGCAAATGTGCCTCTaGTCATCACAGCATCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: IQMQLQTHDRHANSRDHQLQMCL*SSQHHY Trigger: GTAATGATGCTGTGATGACAAGAGGCACATTTGCAA...TTGGTGGTCACGGCTGTTTGCATGTCTGTCATGTGTTTGCAGTTGCATCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGAAGGGCACTTCAACATaGCTCTGTTTGGTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWKGTST*LCLVFQ Trigger: CTGGAAAACCAAACAGAGCAATGTTGAAGTGCCCTT...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | AAATATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATTATTCCAGTGAAATCTaGAAGAACAACACGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYTPHTYRSLPQHTSHVDYSSEI*KNNTGR Trigger: CCTGCCCGTGTTGTTCTTCAAGATTTCACTGGAATA...ATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTCACCACCTCCAGGATTaGGTGCATTCTGTATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IPTILGSSLDSSISTCYSHHLQD*VHSVLH Trigger: GTGCAATACAGAATGCACCAAATCCTGGAGGTGGTG...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 90 bp | TTTGGGAGCTGGCTTCCCAATAAACTTATTAAAAAGCTTGATGTTTaGAAATGTGCCTCTTGTCATCACAGCATCATTACCTCTTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FGSWLPNKLIKKLDV*KCASCHHSIITSSS Trigger: GCTCGAAGAGGTAATGATGCTGTGATGACAAGAGGCACATTTGCAAACATCAAGCTTTTTAATAAGTTTATTGGGAAGCCAGCTCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | TTAACACACCTACACAGACAGACACATGGTATCTACCAGAACACAGTATGGTTTGATGTAACAAAAGCATaGGATGACCCAGTTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTHLHRQTHGIYQNTVWFDVTKA*DDPVSS Trigger: TGAGCTAACTGGGTCATCCAATGCTTTTGTTACATC...AAACCATACTGTGTTCTGGTAGATACCATGTGTCTGTCTGTGTAGGTGTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | CCACATTTTTGCATTATTTGGCTGGAGGCAGAATCACAAGATACACACATTGGGTTTTTCTGCTGCAACTaGGAAGCCTTTAAATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PHFCIIWLEAESQDTHIGFFCCN*EAFKSN Trigger: GTTGGATTTAAAGGCTTCCAAGTTGCAGCAGAAAAA...CCCAATGTGTGTATCTTGTGATTCTGCCTCCAGCCAAATAATGCAAAAATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCATGGCAGCCCAATCTCTaGAATTTCCTGAACCATATT | + |
|
Preference number: 5 (lower is better) Translates to: NQVPIPTILGSSLDSSISWQPNL*NFLNHI Trigger: AATATGGTTCAGGAAATTCAAGAGATTGGGCTGCCA...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | AATCAGGTACCCATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAAGCATCACAGATGGATaGCAATTATTGGTACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NQVPIPTILGSSLDSSISSITDG*QLLVQL Trigger: CAGTTGTACCAATAATTGCAATCCATCTGTGATGCT...TGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAATGGGTACCTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | AAATATACCCCTCATACTTACAGGTCTCTTCCACAACACACTTCACACGTTGATGACTCAAGTTTGGTTTaGTCAAAACCTGTATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KYTPHTYRSLPQHTSHVDDSSLV*SKPVCS Trigger: AGAACATACAGGTTTTGACAAAACCAAACTTGAGTC...ATCAACGTGTGAAGTGTGTTGTGGAAGAGACCTGTAAGTATGAGGGGTATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTAGAGACAGTGTCACTTaGTTTTTCTGCTGCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPTILGSSLDSSISTCYSRDSVT*FFCCNL Trigger: CAAGTTGCAGCAGAAAAACAAAGTGACACTGTCTCT...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | CATGATCAGCTATATTTTGCAGTCGTTTATCTTCAGACATGGAGTGCATTCTGGGATGGATTGCAATTATaGGTACAACTGATAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HDQLYFAVVYLQTWSAFWDGLQL*VQLITA Trigger: TGCAGTTATCAGTTGTACCAATAATTGCAATCCATC...CCAGAATGCACTCCATGTCTGAAGATAAACGACTGCAAAATATAGCTGATCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCCACAATCTTAGGGTCTAGTCTGGATTCTTCTATTTCAACTTGCTATTCTTCCATTGACTCAAGTTaGGTTTTGTCAAAACCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IPTILGSSLDSSISTCYSSIDSS*VLSKPV Trigger: TACAGGTTTTGACAAAACCAAACTTGAGTCAATGGA...AGAATAGCAAGTTGAAATAGAAGAATCCAGACTAGACCCTAAGATTGTGGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | ATCACACGATCCCCGGCAGGTAGTCTGGCCTCGACATaGAAGCTTCTTAGACTGCACTTTAAGTGGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ITRSPAGSLAST*KLLRLHFKWRE Trigger: CTCTCTCCACTTAAAGTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACTACCTGCCGGGGATCGTGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | AGCTCTCCAGAATCACACGATCCCCGGCAGGTAGTCTaGCCTCGACATGGAAGCTTCTTAGACTGCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSPESHDPRQVV*PRHGSFLDCTL Trigger: TAAAGTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACTACCTGCCGGGGATCGTGTGATTCTGGAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | CATAAGCCACCACTAAGGGCGGAGAGGCGAGATAATTaGCACGGACACAATCACAGAGACGGCCTTCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HKPPLRAERRDN*HGHNHRDGLRN Trigger: ATTTCGAAGGCCGTCTCTGTGATTGTGTCCGTGCCAATTATCTCGCCTCTCCGCCCTTAGTGGTGGCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS CCA 72 bp | GCTCTGTCTGGAAGTCTATATTCACTGTGCCTGCTATaGCATAAGCCACCACTAAGGGCGGAGAGGCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALSGSLYSLCLL*HKPPLRAERRD Trigger: ATCTCGCCTCTCCGCCCTTAGTGGTGGCTTATGCCATAGCAGGCACAGTGAATATAGACTTCCAGACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS GCA 72 bp | GTGGACTTTCTTAGGATCACCTCCAAGAGTTTTCACTaGCTCCCTCATAGCAGCAAAATCCACCATTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VDFLRITSKSFH*LPHSSKIHHCR Trigger: CCGGCAATGGTGGATTTTGCTGCTATGAGGGAGGCAGTGAAAACTCTTGGAGGTGATCCTAAGAAAGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 72 bp | TACCTAAAGGCTCTGTCTGGAAGTCTATATTCACTGTaGCTGCTATGGCATAAGCCACCACTAAGGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YLKALSGSLYSL*LLWHKPPLRAE Trigger: CTCCGCCCTTAGTGGTGGCTTATGCCATAGCAGGCACAGTGAATATAGACTTCCAGACAGAGCCTTTAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS GCA 72 bp | GGAGCTTCTAACGAATTCCACCGTTTATTTCCCATCTaGCAGGTCCTAACCATCTGTAACTCCAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GASNEFHRLFPI*QVLTICNSSSR Trigger: CCTGGAGCTGGAGTTACAGATGGTTAGGACCTGGCAGATGGGAAATAAACGGTGGAATTCGTTAGAAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214023.2 |
||
| CDS TCA 72 bp | CACCCAAGAATCCCCAATCCGTTCACCATGGTTATATaGGAATCTGTGCCAACTACACTGTCTGGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPRIPNPFTMVI*ESVPTTLSGKS Trigger: GCTCTTCCCAGACAGTGTAGTTGGCACAGATTCTCATATAACCATGGTGAACGGATTGGGGATTCTTGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 72 bp | CAGGTAGTCTGGCCTCGACATGGAAGCTTCTTAGACTaGACTTTAAGTGGAGAGAGCTTTCCTGCTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QVVWPRHGSFLD*TLSGESFPAFC Trigger: ACAGAAAGCAGGAAAGCTCTCTCCACTTAAAGTGCAGTCTAAGAAGCTTCCATGTCGAGGCCAGACTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 72 bp | TCCCCAATCCGTTCACCATGGTTATATGAGAATCTGTaGCAACTACACTGTCTGGGAAGAGCAGGTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPIRSPWLYENL*QLHCLGRAGPF Trigger: AAACGGACCTGCTCTTCCCAGACAGTGTAGTTGGCACAGATTCTCATATAACCATGGTGAACGGATTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | CAACTCCCCACCCAAGAATCCCCAATCCGTTCACCATaGTTATATGAGAATCTGTGCCAACTACACTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLPTQESPIRSP*LYENLCQLHCL Trigger: CAGACAGTGTAGTTGGCACAGATTCTCATATAACCATGGTGAACGGATTGGGGATTCTTGGGTGGGGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | TGTATTGCACATTTACTGAAGTCAATCTGTAAAGAGTaGTCCACTGTGAGATCTGTCGGACAGGCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CIAHLLKSICKE*STVRSVGQAGW Trigger: CCACCCTGCCTGTCCGACAGATCTCACAGTGGACCACTCTTTACAGATTGACTTCAGTAAATGTGCAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 72 bp | GCACTACTCCTAGCAATACTTCCAGCGGGTGATATATaGTCTGTAGTGACAGAGTCTCCCAAATACAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLAILPAGDI*SVVTESPKYNR Trigger: CCTGTTGTATTTGGGAGACTCTGTCACTACAGATCATATATCACCCGCTGGAAGTATTGCTAGGAGTAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 72 bp | AGCAGCAGCACTACTCCTAGCAATACTTCCAGCGGGTaGTATATGATCTGTAGTGACAGAGTCTCCCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SSSTTPSNTSSG*YMICSDRVSQI Trigger: TATTTGGGAGACTCTGTCACTACAGATCATATATCACCCGCTGGAAGTATTGCTAGGAGTAGTGCTGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 72 bp | CCAAAGAACTCAACAAACTTTCCAGCCACGCCTACTTaGCTGAGGTGCTTTGTAATGCCAAGGACAATATCT | + |
|
Preference number: 6 (lower is better) Translates to: PKNSTNFPATPT*LRCFVMPRTIS Trigger: AGATATTGTCCTTGGCATTACAAAGCACCTCAGGCAAGTAGGCGTGGCTGGAAAGTTTGTTGAGTTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS GCA 72 bp | AGAAAATACTTCTCTGCCAGAGAGGCCCAAGGAATCTaGATTTTCTCCTGGGAGGAATTCAAGTGGTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RKYFSAREAQGI*IFSWEEFKWCY Trigger: ATAGCACCACTTGAATTCCTCCCAGGAGAAAATGCAGATTCCTTGGGCCTCTCTGGCAGAGAAGTATTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | CCCAAATACAACAGGACATGGGCATTCTCAATAGGCTaGGATGCAGCTGGCTCTTTGGTAAGCTTATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PKYNRTWAFSIG*DAAGSLVSLSK Trigger: TTTTGATAAGCTTACCAAAGAGCCAGCTGCATCCCAGCCTATTGAGAATGCCCATGTCCTGTTGTATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | CACAATTTCGTACAGCAGCTTCCAATAGGACCCGTATaGAGTAAGGCAGAATATCATACTTGGTGCCGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: HNFVQQLPIGPV*SKAEYHTWCRQ Trigger: TTGGCGGCACCAAGTATGATATTCTGCCTTACTCAATACGGGTCCTATTGGAAGCTGCTGTACGAAATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | TCCAAAGAACTCAACAAACTTTCCAGCCACGCCTACTaGCCTGAGGTGCTTTGTAATGCCAAGGACAATATC | + |
|
Preference number: 6 (lower is better) Translates to: SKELNKLSSHAY*PEVLCNAKDNI Trigger: GATATTGTCCTTGGCATTACAAAGCACCTCAGGCAAGTAGGCGTGGCTGGAAAGTTTGTTGAGTTCTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | TTCTGCAGCTTCAAATACATCGAGCGTTTGTCCCGATaGAAAATGAATTGTTTTGGGAGCTGGCTTCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FCSFKYIERLSR*KMNCFGSWLPN Trigger: ATTGGGAAGCCAGCTCCCAAAACAATTCATTTTCCATCGGGACAAACGCTCGATGTATTTGAAGCTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | CCAAAACAGCTTTTACACCCAGCAAATAGGGTCCCTTaGCAGCCCAATCTCTTGAATTTCCTGAACCATATT | + |
|
Preference number: 6 (lower is better) Translates to: PKQLLHPANRVP*QPNLLNFLNHI Trigger: AATATGGTTCAGGAAATTCAAGAGATTGGGCTGCCAAGGGACCCTATTTGCTGGGTGTAAAAGCTGTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | GCACGGACACAATCACAGAGACGGCCTTCGAAATGTTaGTTTCCAGATAAAACTCCACAGGTAACCAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: ARTQSQRRPSKC*FPDKTPQVTKS Trigger: TGATTTGGTTACCTGTGGAGTTTTATCTGGAAACAAACATTTCGAAGGCCGTCTCTGTGATTGTGTCCGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS GCA 72 bp | CACAGATGGATTGCAATTATTGGTACAACTGATAACTaGAGCAATGACCACGGATCCATGGGACAGCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: HRWIAIIGTTDN*SNDHGSMGQLI Trigger: TATAAGCTGTCCCATGGATCCGTGGTCATTGCTGCAGTTATCAGTTGTACCAATAATTGCAATCCATCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CCA 72 bp | CATGGTTATATGAGAATCTGTGCCAACTACACTGTCTaGGAAGAGCAGGTCCGTTTCTTCAAAAACTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: HGYMRICANYTV*EEQVRFFKNYS Trigger: AGAGTAGTTTTTGAAGAAACGGACCTGCTCTTCCCAGACAGTGTAGTTGGCACAGATTCTCATATAACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | ATGCCAAGGACAATATCTATGGATGTAACAAAAGCATaGGATGACCCAGTTAGCTCACATCCAACCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MPRTISMDVTKA*DDPVSSHPTTS Trigger: AGAGGTGGTTGGATGTGAGCTAACTGGGTCATCCAATGCTTTTGTTACATCCATAGATATTGTCCTTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | TTAGCCAGAAGACCTGCAGCAAGCATCACAGATGGATaGCAATTATTGGTACAACTGATAACTGCAGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LARRPAASITDG*QLLVQLITAAM Trigger: CATTGCTGCAGTTATCAGTTGTACCAATAATTGCAATCCATCTGTGATGCTTGCTGCAGGTCTTCTGGCTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS TCA 72 bp | TTTAACACTGTCTCAGGTTCAGGCACTGGTTGCAAATaGAAAGGACACAAGACAGGTGTATTCTCAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FNTVSGSGTGCK*KGHKTGVFSIC Trigger: ACAGATTGAGAATACACCTGTCTTGTGTCCTTTTCATTTGCAACCAGTGCCTGAACCTGAGACAGTGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | CTCACTTCCATCATAACGAACAGAGACAGTGTCACTTaGTTTTTCTGCTGCAACTTGGAAGCCTTTAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LTSIITNRDSVT*FFCCNLEAFKS Trigger: GGATTTAAAGGCTTCCAAGTTGCAGCAGAAAAACAAAGTGACACTGTCTCTGTTCGTTATGATGGAAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | CTGCTTCTGATAAAGGTGCTGTATTTCCTACACATGTaGAACATCCATAGCCAACTATGTCAAACCCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLIKVLYFLHM*NIHSQLCQTLA Trigger: AGCTAGGGTTTGACATAGTTGGCTATGGATGTTCAACATGTGTAGGAAATACAGCACCTTTATCAGAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034843.9 ENSMUST00000214023.2 |
||
| CDS CAA 90 bp | CTACACTGTCTGGGAAGAGCAGGTCCGTTTCTTCAAAAACTACTCTaGATAAATATTCTAAGTTCACTTGATGAGCCATTCCAGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHCLGRAGPFLQKLL*INILSSLDEPFQFQ Trigger: CTGGAACTGGAATGGCTCATCAAGTGAACTTAGAATATTTATCAAGAGTAGTTTTTGAAGAAACGGACCTGCTCTTCCCAGACAGTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 90 bp | TGCTTTGTAATGCCAAGGACAATATCTATGGATGTAACAAAAGCATaGGATGACCCAGTTAGCTCACATCCAACCACCTCTGGTAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: CFVMPRTISMDVTKA*DDPVSSHPTTSGKV Trigger: TACTTTACCAGAGGTGGTTGGATGTGAGCTAACTGGGTCATCCAATGCTTTTGTTACATCCATAGATATTGTCCTTGGCATTACAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 90 bp | CAGCTTATACTCACTTCCATCATAACGAACAGAGACAGTGTCACTTaGTTTTTCTGCTGCAACTTGGAAGCCTTTAAATCCAACCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QLILTSIITNRDSVT*FFCCNLEAFKSNLF Trigger: GAAAAGGTTGGATTTAAAGGCTTCCAAGTTGCAGCAGAAAAACAAAGTGACACTGTCTCTGTTCGTTATGATGGAAGTGAGTATAAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||
| CDS CAA 72 bp | TTGGGAGCTGGCTTCCCAATAAACTTATTAAAAAGCTaGATGTTTGCAAATGTGCCTCTTGTCATCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGAGFPINLLKS*MFANVPLVITA Trigger: TGCTGTGATGACAAGAGGCACATTTGCAAACATCAAGCTTTTTAATAAGTTTATTGGGAAGCCAGCTCCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034843.9 |
||