Pregenerated sensors for IRAK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059883Ensembl transcript IDs: ENSMUST00000074936.10, ENSMUST00000109248.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCAGTGCTCGCTGCTGCCGGGAAATGTTACCTTTAGAGCCGCGCTaGGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RSARCCREMLPLEPR*EAALVSPRRDGRQQ Trigger: CTGCTGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAAGGTAACATTTCCCGGCAGCAGCGAGCACTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATaGAAGGCAGCAGGCGTTACAGCCGCAGCCCTTGCTTGTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: FRAALRGCTSVSQKG*KAAGVTAAALACSH Trigger: ATGAGAACAAGCAAGGGCTGCGGCTGTAACGCCTGCTGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR GCA 90 bp | GATGTGATCAGAAAGGTGGGCCGTGCCGTTTCAGCATACGGATGTTaGTCCAGTCTGCCCTTCATTCCCATGCTGTCCAGTGTGGTGTCG | + |
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Preference number: 1 (lower is better) Translates to: DVIRKVGRAVSAYGC*SSLPFIPMLSSVVS Trigger: CGACACCACACTGGACAGCATGGGAATGAAGGGCAGACTGGAGCAACATCCGTATGCTGAAACGGCACGGCCCACCTTTCTGATCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTaGGCCTCCTCTGGGAAGGCCTTAGCATCTCTTCGATGGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: DLASQSSPILVHARR*ASSGKALASLRWLL Trigger: CAGGAGCCATCGAAGAGATGCTAAGGCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 90 bp | GATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCAGGGCAGCTaGAGGCCGCAGTGCTCGCTGCTGCCGGGAAATGTTACCTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: DEGASEGFEFIRQGS*RPQCSLLPGNVTFR Trigger: TCTAAAGGTAACATTTCCCGGCAGCAGCGAGCACTGCGGCCTCCAGCTGCCCTGCCTTATGAATTCAAACCCCTCACTTGCTCCTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 90 bp | TCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTaGGAAGGCCTTAGCATCTCTTCGATGGCTCCTGACAGTCTACAC | + |
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Preference number: 1 (lower is better) Translates to: SELAHFSSCKKVGLL*EGLSISSMAPDSLH Trigger: GTGTAGACTGTCAGGAGCCATCGAAGAGATGCTAAGGCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR TCA 90 bp | CCTTGTCTTCCGTGTGGTACCTTCTGTCTCAGCACTGTATGCTTCTaGGCTTCTTGCCAGGAGCTTAGATGCAATTTGAGGAAGGTTATA | + |
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Preference number: 1 (lower is better) Translates to: PCLPCGTFCLSTVCF*ASCQELRCNLRKVI Trigger: TATAACCTTCCTCAAATTGCATCTAAGCTCCTGGCAAGAAGCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGAAGACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR TCA 90 bp | AGGGTTACAGGAGCAGTGGAGAGAGGTTCCTTACAGGAACCTAGGTaGGGAGCTATTTACAGGAGCATGAAGTTCCTATCAAAAACCAAA | + |
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Preference number: 1 (lower is better) Translates to: RVTGAVERGSLQEPR*GAIYRSMKFLSKTK Trigger: TTTGGTTTTTGATAGGAACTTCATGCTCCTGTAAATAGCTCCTCACCTAGGTTCCTGTAAGGAACCTCTCTCCACTGCTCCTGTAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 90 bp | ATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGCAGCTAAGAGCTaGTCCAAAGCTTTACAGGAGTGGCACACACCTTTAATCCCAACA | + |
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Preference number: 1 (lower is better) Translates to: IKNQKPALRLKAAKS*SKALQEWHTPLIPT Trigger: TGTTGGGATTAAAGGTGTGTGCCACTCCTGTAAAGCTTTGGACCAGCTCTTAGCTGCCTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 90 bp | GGAAAATGGCCTCTCCAGAACTTTCTTTACAGAGACTCATGCAGATaGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: GKWPLQNFLYRDSCR*SRPVEVICLFTSAG Trigger: TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCTGGAGAGGCCATTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 90 bp | TCCAGAACTTTCTTTACAGAGACTCATGCAGATGGAGCAGGCCTGTaGAAGTTATATGTCTTTTTACTTCAGCGGGAGCAGTACAATCAA | + |
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Preference number: 1 (lower is better) Translates to: SRTFFTETHADGAGL*KLYVFLLQREQYNQ Trigger: TTGATTGTACTGCTCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 90 bp | AAAGACATTTCAGCTACAAGAAACAGTCTTGAGATGAAGTCTTTCTaGGACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: KDISATRNSLEMKSF*DLASQSSPILVHAR Trigger: TCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTCCCAGAAAGACTTCATCTCAAGACTGTTTCTTGTAGCTGAAATGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR GCA 90 bp | GATAGAGGAAAATGGCCTCTCCAGAACTTTCTTTACAGAGACTCATaGAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCA | + |
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Preference number: 1 (lower is better) Translates to: DRGKWPLQNFLYRDS*RWSRPVEVICLFTS Trigger: TGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCTGGAGAGGCCATTTTCCTCTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 90 bp | AATGTAAGATTCCCTTCCTTAACACTGATTATCACTAGTGCTCACTaGCCATCTGTAGCATTAGGATTGCAACATATAGAACATTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: NVRFPSLTLIITSAH*PSVALGLQHIEHFC Trigger: GCAGAAATGTTCTATATGTTGCAATCCTAATGCTACAGATGGCCAGTGAGCACTAGTGATAATCAGTGTTAAGGAAGGGAATCTTACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGAGCTGGAGGCCGCAGTaGTCGCTGCTGCCGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ASQSSPILVHARRWASSGSWRPQ*SLLPGN Trigger: ATTTCCCGGCAGCAGCGAGCACTGCGGCCTCCAGCT...CCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGCCTTTAGAGCCGCGCTaGGAGGCTGCACTAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: CLSELAHFSSCKKVGLLWPLEPR*EAALVS Trigger: AGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAAGG...CCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCATACAGCCGCAGCCCTTaGTTGTTCTCATGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: FRAALRGCTSVSQKGWKAYSRSP*LFSCGR Trigger: CCTTCCACATGAGAACAAGCAAGGGCTGCGGCTGTA...TGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGCCCTAAAGTTGGGCTaGAGATTTGGTCTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: CLSELAHFSSCKKVGLLWALKLG*RFGLWA Trigger: GGCCCACAGACCAAATCTCCAGCCCAACTTTAGGGC...CCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGAAACCTCTTAGGCTTTaGCAGCAGACCTGGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ASQSSPILVHARRWASSGKPLRL*QQTWVS Trigger: AGACACCCAGGTCTGCTGGCAAAGCCTAAGAGGTTT...CCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGTGGTACCTTCTGTCTCAGCACTGTATGCTTCTGAGCTTCTTGCCAGGAGTCTCCCAGAAGGGATaGAAGGCAGCAGGCGTTACA | + |
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Preference number: 2 (lower is better) Translates to: SVWYLLSQHCMLLSFLPGVSQKG*KAAGVT Trigger: TGTAACGCCTGCTGCCTTCCATCCCTTCTGGGAGAC...TCCTGGCAAGAAGCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCCTGCAGTTTACAAAGTaGGGTGTTGCTACCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: DLASQSSPILVHARRWASLQFTK*GVATRS Trigger: AGATCTGGTAGCAACACCCCACTTTGTAAACTGCAG...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCAGCTATAAGCCACTGTaGCTGGCTAAGTGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: DLASQSSPILVHARRWASSYKPL*LAKCKQ Trigger: CTGTTTACACTTAGCCAGCCACAGTGGCTTATAGCT...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGCAGCTAAGAGCTGGTCCCAAACAACAGGTAGGTaGCGCAGCTCAGTGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PIKNQKPALRLKAAKSWSQTTGR*RSSVSK Trigger: CTTTGACACTGAGCTGCGTCACCTACCTGTTGTTTG...GGACCAGCTCTTAGCTGCCTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGTGCCAGGAGCTTAGATaGAATTTGAGGAAGGTTATA | + |
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Preference number: 2 (lower is better) Translates to: CLSELAHFSSCKKVGLLWCQELR*NLRKVI Trigger: TATAACCTTCCTCAAATTGCATCTAAGCTCCTGGCA...CCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCATAAGCCACTGTGGCTaGCTAAGTGTAAACAGAATA | + |
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Preference number: 2 (lower is better) Translates to: DLASQSSPILVHARRWASISHCG*LSVNRI Trigger: TATTCTGTTTACACTTAGCCAGCCACAGTGGCTTAT...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGAAGGCTATTTATTCGATGCCTaGATACACGTGCAGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: SELAHFSSCKKVGLLWEGYLFDA*IHVQHK Trigger: CTTATGCTGCACGTGTATCCAGGCATCGAATAAATA...GCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGGAGCAGTGGAGAGAGGTTCCTTACAGGAACCTAGGTGAGGAGCTATTTAAGGCAGCTAAGAGCTaGTCCAAAGCTTTACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LQEQWREVPYRNLGEELFKAAKS*SKALQE Trigger: CTCCTGTAAAGCTTTGGACCAGCTCTTAGCTGCCTT...AAATAGCTCCTCACCTAGGTTCCTGTAAGGAACCTCTCTCCACTGCTCCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTTCTTTACAGAGACTCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGGGTTACAGGAGCAGTaGAGAGAGGTTCCTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: RTFFTETHADGAGLWKLYGLQEQ*REVPYR Trigger: CCTGTAAGGAACCTCTCTCCACTGCTCCTGTAACCC...ATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR-3UTR CCA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGATTGGTGATGTTGCTGTaGAACATGAGCCCCATACTA | + |
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Preference number: 2 (lower is better) Translates to: SCRWSRPVEVICLFTSAGLVMLL*NMSPIL Trigger: TAGTATGGGGCTCATGTTCCACAGCAACATCACCAA...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR-3UTR TCA 90 bp | AATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTTATACCTTACAGGAACCTAGGTaGGGAGCTATTTACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NTSTHTHTLQTHYWFCYTLQEPR*GAIYRS Trigger: GCTCCTGTAAATAGCTCCTCACCTAGGTTCCTGTAA...GGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGACATTTCAGCTACAAGAAACAGTCTTGAGATGAAGTCTTTCTGGGACCTTAGCTACAGATGGATGTaGTCAGAAAGGTGGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: KDISATRNSLEMKSFWDLSYRWM*SERWAV Trigger: CACGGCCCACCTTTCTGATCACATCCATCTGTAGCT...AAGGTCCCAGAAAGACTTCATCTCAAGACTGTTTCTTGTAGCTGAAATGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CAA 90 bp | CAGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATaGGTTCTGTTATACCCCACGTATAGTACCATGTATGTGAATTGG | + |
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Preference number: 2 (lower is better) Translates to: QRQYKHTHTHPPNSL*VLLYPTYSTMYVNW Trigger: CCAATTCACATACATGGTACTATACGTGGGGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CAA 90 bp | ACACTGATTATCACTAGTGCTCACTGGCCATCTGTAGCATTAGGATaGCAACATATAGAACATTTCTGCAGTTTACAAAGTGGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TLIITSAHWPSVALG*QHIEHFCSLQSGVL Trigger: CAACACCCCACTTTGTAAACTGCAGAAATGTTCTATATGTTGCAATCCTAATGCTACAGATGGCCAGTGAGCACTAGTGATAATCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTTCTTTACAGAGACTCATGCAGATGGAGCAGGCCTGTGGAAGTTATATAGTTACATGTTTTATTaGCCATTGCAGAGACAATAC | + |
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Preference number: 2 (lower is better) Translates to: RTFFTETHADGAGLWKLYSYMFY*PLQRQY Trigger: GTATTGTCTCTGCAATGGGCAATAAAACATGTAACT...ATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 72 bp | CAGCCGCAGCCCTTGCTTGTTCTCATGTGGAAGGTGTaGGTACACTCATGGAGGCATCCGCAGCTGGGCGCC | + |
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Preference number: 3 (lower is better) Translates to: QPQPLLVLMWKV*VHSWRHPQLGA Trigger: GGCGCCCAGCTGCGGATGCCTCCATGAGTGTACCCACACCTTCCACATGAGAACAAGCAAGGGCTGCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 72 bp | GCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATaGAAGGCAGCAGGCGTTACAGCCGCAGCCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: ALRGCTSVSQKG*KAAGVTAAALA Trigger: AGCAAGGGCTGCGGCTGTAACGCCTGCTGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR TCA 72 bp | CGCTGCTGCCGGGAAATGTTACCTTTAGAGCCGCGCTaGGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: RCCREMLPLEPR*EAALVSPRRDG Trigger: TCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAAGGTAACATTTCCCGGCAGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 72 bp | GCAAGTGAGGGGTTTGAATTCATAAGGCAGGGCAGCTaGAGGCCGCAGTGCTCGCTGCTGCCGGGAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: ASEGFEFIRQGS*RPQCSLLPGNV Trigger: AACATTTCCCGGCAGCAGCGAGCACTGCGGCCTCCAGCTGCCCTGCCTTATGAATTCAAACCCCTCACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR GCA 72 bp | GGGATGGAAGGCAGCAGGCGTTACAGCCGCAGCCCTTaGTTGTTCTCATGTGGAAGGTGTGGGTACACTCAT | + |
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Preference number: 3 (lower is better) Translates to: GMEGSRRYSRSP*LFSCGRCGYTH Trigger: ATGAGTGTACCCACACCTTCCACATGAGAACAAGCAAGGGCTGCGGCTGTAACGCCTGCTGCCTTCCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR GCA 72 bp | GGACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATaGAAGAAGGTGGGCCTCCTCTGGGAAGGCCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: GPCLSELAHFSS*KKVGLLWEGLS Trigger: GCTAAGGCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR GCA 72 bp | TTTGAATTCATAAGGCAGGGCAGCTGGAGGCCGCAGTaGTCGCTGCTGCCGGGAAATGTTACCTTTAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: FEFIRQGSWRPQ*SLLPGNVTFRA Trigger: GGCTCTAAAGGTAACATTTCCCGGCAGCAGCGAGCACTGCGGCCTCCAGCTGCCCTGCCTTATGAATTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCGACAGCTACAGATGGATGTGATCAGAAAGGTGGGCCGTGCCGTTTCAGCTTACAGCCGCAGCCCTaGCTTGTTCTCATGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RATATDGCDQKGGPCRFSLQPQP*LVLMWK Trigger: CTTCCACATGAGAACAAGCAAGGGCTGCGGCTGTAA...GCTGAAACGGCACGGCCCACCTTTCTGATCACATCCATCTGTAGCTGTCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR TCA 72 bp | ATCCCAACACGCAGTAGGCAGAGACAGGCAGATTGCTaGGTTCAAGGCCAGCCTGGTCTACAGAGCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPTRSRQRQADC*VQGQPGLQSKF Trigger: GAACTTGCTCTGTAGACCAGGCTGGCCTTGAACTCAGCAATCTGCCTGTCTCTGCCTACTGCGTGTTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR GCA 72 bp | ACAGCTACAGATGGATGTGATCAGAAAGGTGGGCCGTaGCGTTTCAGCATACGGATGTTGCTCCAGTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: TATDGCDQKGGP*RFSIRMLLQSA Trigger: GGCAGACTGGAGCAACATCCGTATGCTGAAACGGCACGGCCCACCTTTCTGATCACATCCATCTGTAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 72 bp | GGTGATGTTGCTGTGGAACATGAGCCCCATACTAGGTaGGCGGGGCCAAGTGCTACCATGCAACTATCACTT | + |
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Preference number: 3 (lower is better) Translates to: GDVAVEHEPHTR*AGPSATMQLSL Trigger: AAGTGATAGTTGCATGGTAGCACTTGGCCCCGCCCACCTAGTATGGGGCTCATGTTCCACAGCAACATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| 3UTR CCA 72 bp | GTCCGTAGGTATGTGACGCCTGCCTTGTCTTCCGTGTaGTACCTTCTGTCTCAGCACTGTATGCTTCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VRRYVTPALSSV*YLLSQHCMLLS Trigger: GCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGAAGACAAGGCAGGCGTCACATACCTACGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR CCA 72 bp | GCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTaGGAAGGCCTTAGCATCTCTTCGATGGCTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: AHFSSCKKVGLL*EGLSISSMAPD Trigger: GTCAGGAGCCATCGAAGAGATGCTAAGGCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| 3UTR TCA 72 bp | AAAGATTCTTCCTTATCAACCGCTGGTGTTGGGTGCTaGGCCTGGGGCAGTTCTAGATCCCGTCCATCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KDSSLSTAGVGC*AWGSSRSRPSL Trigger: GAGTGATGGACGGGATCTAGAACTGCCCCAGGCTCAGCACCCAACACCAGCGGTTGATAAGGAAGAATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR CCA 72 bp | TGGGCCTCCTCTGGGAAGGCCTTAGCATCTCTTCGATaGCTCCTGACAGTCTACACCTCTGTACATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: WASSGKALASLR*LLTVYTSVHHL Trigger: AAGATGATGTACAGAGGTGTAGACTGTCAGGAGCCATCGAAGAGATGCTAAGGCCTTCCCAGAGGAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR CCA 72 bp | TCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTaGGCCTCCTCTGGGAAGGCCTTAGCATCTCTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SQSSPILVHARR*ASSGKALASLR Trigger: TCGAAGAGATGCTAAGGCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTGGTGCCTTCCTCTCTaGCAGATTGAGATAGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: DLASQSSPILVHARRWASWCLPL*QIEIDN Trigger: ATTGTCTATCTCAATCTGCAAGAGAGGAAGGCACCA...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR TCA 72 bp | GGAGCAGTGGAGAGAGGTTCCTTACAGGAACCTAGGTaGGGAGCTATTTACAGGAGCATGAAGTTCCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GAVERGSLQEPR*GAIYRSMKFLS Trigger: TGATAGGAACTTCATGCTCCTGTAAATAGCTCCTCACCTAGGTTCCTGTAAGGAACCTCTCTCCACTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR TCA 72 bp | GGAAAGACATTTCAGCTACAAGAAACAGTCTTGAGATaGAGTCTTTCTGGGACCTTGCCTCTCAGAGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GKTFQLQETVLR*SLSGTLPLRAR Trigger: GCGAGCTCTGAGAGGCAAGGTCCCAGAAAGACTTCATCTCAAGACTGTTTCTTGTAGCTGAAATGTCTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR GCA 72 bp | GACAGCTTGGCCTCAGTTACATGTTTTATTGCCCATTaGAGAGACAATACAAGCACACACACACACACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DSLASVTCFIAH*RDNTSTHTHTL Trigger: GAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTAACTGAGGCCAAGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR GCA 72 bp | CCCCTCAGACAGCTTGGCCTCAGTTACATGTTTTATTaGCCATTGCAGAGACAATACAAGCACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PLRQLGLSYMFY*PLQRQYKHTHT Trigger: TGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTAACTGAGGCCAAGCTGTCTGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR TCA 72 bp | TCTGCATCTTGTAATTCTCTGCTTAAACAGGCAGGCTaGAGAGACAGCTCAGCTCTAGTGGCAAGTCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SASCNSLLKQAG*RDSSALVASLS Trigger: ACTAAGACTTGCCACTAGAGCTGAGCTGTCTCTTCAGCCTGCCTGTTTAAGCAGAGAATTACAAGATGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CCA 72 bp | ACAAGCACACACACACACACCCTCCAAACTCACTATTaGTTCTGTTATACCCCACGTATAGTACCATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: TSTHTHTLQTHY*FCYTPRIVPCM Trigger: CATACATGGTACTATACGTGGGGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CCA 72 bp | TGCGCTAAGTGCGTGGTAGCTATAAGCCACTGTGGCTaGCTAAGTGTAAACAGAATAAAATGTAAGATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CAKCVVAISHCG*LSVNRIKCKIP Trigger: GGGAATCTTACATTTTATTCTGTTTACACTTAGCCAGCCACAGTGGCTTATAGCTACCACGCACTTAGCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTCCCCAAATAATCCTATaGTCTCTGTATAGCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RDNTSTHTHTLQTHYWFCPQIIL*SLYSTV Trigger: CACTGTGCTATACAGAGACAATAGGATTATTTGGGG...ACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGAATGTTTTATTGCCCATaGCAGAGACAATACAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCRWSRPVEVICLFTSAGMFYCP*QRQYKH Trigger: GTGCTTGTATTGTCTCTGCAATGGGCAATAAAACAT...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR TCA 72 bp | TACAGGAACCTAGGTGAGGAGCTATTTACAGGAGCATaGAGTTCCTATCAAAAACCAAAAGCCAGCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YRNLGEELFTGA*SSYQKPKASTK Trigger: CTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAAATAGCTCCTCACCTAGGTTCCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CCA 72 bp | CCTCTCCAGAACTTTCTTTACAGAGACTCATGCAGATaGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: PLQNFLYRDSCR*SRPVEVICLFT Trigger: AGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGTCTCTGTAAAGAAAGTTCTGGAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGACAGTTACATGTTTTATaGCCCATTGCAGAGACAATA | + |
|
Preference number: 3 (lower is better) Translates to: SCRWSRPVEVICLFTSAGQLHVL*PIAETI Trigger: TATTGTCTCTGCAATGGGCAATAAAACATGTAACTG...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CCA 72 bp | TATAGAGGCATTCCTTTGTCCATTGATAGAGGAAAATaGCCTCTCCAGAACTTTCTTTACAGAGACTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: YRGIPLSIDRGK*PLQNFLYRDSC Trigger: GCATGAGTCTCTGTAAAGAAAGTTCTGGAGAGGCCATTTTCCTCTATCAATGGACAAAGGAATGCCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTATCAACCGCTGGTGTTGGGTGCTGAGCCTGGGGCAGTTCTAGATCCCGGTTGTCGCTGTCGCTaGAGAAGCCGAGCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPYQPLVLGAEPGAVLDPGCRCR*RSRAAP Trigger: TGGAGCTGCTCGGCTTCTCCAGCGACAGCGACAACC...GGGATCTAGAACTGCCCCAGGCTCAGCACCCAACACCAGCGGTTGATAAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCACCATTTGCTGTCCCCTaGGCAACCTTGCACCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRAALRGCTSVSQKGWKAPFAVP*ATLHLV Trigger: CACAAGGTGCAAGGTTGCTCAGGGGACAGCAAATGG...TGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCGACAGCTACAGATGGATGTGATCAGAAAGGTGGGCCGTGCCGTTTCAGCCCGCAAAGCTTCGGGTaGCATGTAAGCCGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RATATDGCDQKGGPCRFSPQSFG*HVSRCA Trigger: GGCACAACGGCTTACATGGCACCCGAAGCTTTGCGG...GCTGAAACGGCACGGCCCACCTTTCTGATCACATCCATCTGTAGCTGTCGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | TCCGTGTGGTACCTTCTGTCTCAGCACTGTATGCTTCTGAGCTTCTTGCCAGGACCGGCAGCAGGAGAGTaGCGGGGGCAAACAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVWYLLSQHCMLLSFLPGPAAGE*RGQTAQ Trigger: TTGAGCTGTTTGCCCCCGCCACTCTCCTGCTGCCGG...TCCTGGCAAGAAGCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGCCTTGCCGAAGCCCGTaGAAGCCCAAAGTCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQSSPILVHARRWASSGPCRSP*KPKVRY Trigger: ATATCTGACTTTGGGCTTGCACGGGCTTCGGCAAGG...CCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTACAGGAGCAGTGGAGAGAGGTTCCTTACAGGAACCTAGGTGAGGAGCTACCGCAAAGCTTCGGGTaGCATGTAAGCCGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQEQWREVPYRNLGEELPQSFG*HVSRCA Trigger: GGCACAACGGCTTACATGGCACCCGAAGCTTTGCGG...TAGCTCCTCACCTAGGTTCCTGTAAGGAACCTCTCTCCACTGCTCCTGTAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | ACTCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGCCGGCAGCAGGAGAGTaGCGGGGGCAAACAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THADGAGLWKLYVFLLQRPAAGE*RGQTAQ Trigger: TTGAGCTGTTTGCCCCCGCCACTCTCCTGCTGCCGG...CCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | TCCGTGTGGTACCTTCTGTCTCAGCACTGTATGCTTCTGAGCTTCTTGCCAGGATCCCCTGAGCAACCTTaGACCTTGTGTGCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVWYLLSQHCMLLSFLPGSPEQP*TLCARK Trigger: TTTCCTGGCACACAAGGTGCAAGGTTGCTCAGGGGA...TCCTGGCAAGAAGCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCAATGCTCTTCAGTTCATaGAACGAGAAGCTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRAALRGCTSVSQKGWKAMLFSS*NEKLWN Trigger: GTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCAT...TGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR TCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCCGTCGAAGTTGTTTGTaGTGCTCTTCAGTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLASQSSPILVHARRWASRRSCL*CSSVHG Trigger: TCCATGAACTGAAGAGCATCACAAACAACTTCGACG...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTAGGTAGCCCAGGGGATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCTGTGCAGTTCGTGGTaGCCCAGTCAAACAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGSPGDEGASEGFEFIRLCSSW*PSQTAV Trigger: AACTGCTGTTTGACTGGGGCACCACGAACTGCACAG...CCTTATGAATTCAAACCCCTCACTTGCTCCTTCATCCCCTGGGCTACCTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | GACCTTGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCCTGTTTTTCTTCTCATaGAGACACTGGCTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLASQSSPILVHARRWASLFFFS*RHWLAA Trigger: TGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAG...GGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTAGGTAGCCCAGGGGATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCAACTGTGCAGTTCGTaGTGCCCCAGTCAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGSPGDEGASEGFEFIRQLCSS*CPSQTA Trigger: TGCTGTTTGACTGGGGCACCACGAACTGCACAGTTG...CCTTATGAATTCAAACCCCTCACTTGCTCCTTCATCCCCTGGGCTACCTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTGGTTGTCGCTGTCGCTaGAGAAGCCGAGCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDNTSTHTHTLQTHYWFCGCRCR*RSRAAP Trigger: TGGAGCTGCTCGGCTTCTCCAGCGACAGCGACAACC...ACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CAA 72 bp | AGACTACTTAGAGTCCGTAGGTATGTGACGCCTGCCTaGTCTTCCGTGTGGTACCTTCTGTCTCAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLRVRRYVTPA*SSVWYLLSQHC Trigger: ACAGTGCTGAGACAGAAGGTACCACACGGAAGACAAGGCAGGCGTCACATACCTACGGACTCTAAGTAGTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGGAAGGCTTCTTCCACCCTTCTTaGGGATCAATAAAATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SELAHFSSCKKVGLLWEGFFHPS*GSIKSD Trigger: GTCGGATTTTATTGATCCTCAAGAAGGGTGGAAGAA...GCCTTCCCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGCAGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGCCATTTGCTGTCCCCTaGGCAACCTTGCACCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRQYKHTHTHPPNSLLPFAVP*ATLHLV Trigger: CACAAGGTGCAAGGTTGCTCAGGGGACAGCAAATGG...CAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | AGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTCAAGGTCGCCAACTGTaGAGTTCGTGGTGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDNTSTHTHTLQTHYWFCQGRQL*SSWCPS Trigger: ACTGGGGCACCACGAACTGCACAGTTGGCGACCTTG...ACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | CCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGCAGCTAAGAGCTGGTCCTCCCCTGAGCAACCTTaGACCTTGTGTGCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PIKNQKPALRLKAAKSWSSPEQP*TLCARK Trigger: TTTCCTGGCACACAAGGTGCAAGGTTGCTCAGGGGA...GGACCAGCTCTTAGCTGCCTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | ACTCTAGGTAGCCCAGGGGATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCCAGCAAGGACCCGTTaGGCATGTAAGCATACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGSPGDEGASEGFEFIRPARTR*ACKHTL Trigger: TAGTGTATGCTTACATGCCCAACGGGTCCTTGCTGG...CCTTATGAATTCAAACCCCTCACTTGCTCCTTCATCCCCTGGGCTACCTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCAGAGCTCGCCCATTTTAGTTCATGCAAGAAGGTGGGCCTCCTCTGGTGTAGATGTCAGATTTaGGTGTTATTTCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSELAHFSSCKKVGLLWCRCQI*VLFLPA Trigger: TGCGGGGAGAAATAACACCCAAATCTGACATCTACA...CCAGAGGAGGCCCACCTTCTTGCATGAACTAAAATGGGCGAGCTCTGAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTAGGTAGCCCAGGGGATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCTCCTTATATGGAACTaGTTGTATCTGTCGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLGSPGDEGASEGFEFIRLLIWN*LYLSSP Trigger: CGGCGACGACAGATACAATCAGTTCCATATAAGGAG...CCTTATGAATTCAAACCCCTCACTTGCTCCTTCATCCCCTGGGCTACCTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGCAGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGCCAGCAAGGACCCGTTaGGCATGTAAGCATACACTA | + |
|
Preference number: 4 (lower is better) Translates to: PLQRQYKHTHTHPPNSLLPARTR*ACKHTL Trigger: TAGTGTATGCTTACATGCCCAACGGGTCCTTGCTGG...CAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGACTCCTTATATGGAACTaGTTGTATCTGTCGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCRWSRPVEVICLFTSAGLLIWN*LYLSSP Trigger: CGGCGACGACAGATACAATCAGTTCCATATAAGGAG...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTTCAGCTACAAGAAACAGTCTTGAGATGAAGTCTTTCTGGGACCTTCAAGGTCGCCAACTGTaGAGTTCGTGGTGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDISATRNSLEMKSFWDLQGRQL*SSWCPS Trigger: ACTGGGGCACCACGAACTGCACAGTTGGCGACCTTG...AAGGTCCCAGAAAGACTTCATCTCAAGACTGTTTCTTGTAGCTGAAATGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | TTACAGGAGCATGAAGTTCCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGAGGCCCGTGTGTTTGTaGCACTGTTGCCGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQEHEVPIKNQKPALRLKRPVCL*HCCRFS Trigger: AGAGAAGCGGCAACAGTGGCACAAACACACGGGCCT...CTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | TCCGTGTGGTACCTTCTGTCTCAGCACTGTATGCTTCTGAGCTTCTTGCCAGGACTCGTGCTGACACGTTaGCATTACTTTAATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVWYLLSQHCMLLSFLPGLVLTR*HYFNFL Trigger: CAAGAAATTAAAGTAATGGCAACGTGTCAGCACGAG...TCCTGGCAAGAAGCTCAGAAGCATACAGTGCTGAGACAGAAGGTACCACACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | AATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTTATACCCCTTGCCGAAGCCCGTaGAAGCCCAAAGTCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: NTSTHTHTLQTHYWFCYTPCRSP*KPKVRY Trigger: ATATCTGACTTTGGGCTTGCACGGGCTTCGGCAAGG...GGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | TTACAGGAGCATGAAGTTCCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGTCCTGTCCTTTTCCTaGCAAGGCCCGTGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQEHEVPIKNQKPALRLKVLSFS*QGPCVC Trigger: ACAAACACACGGGCCTTGTCAGGAAAAGGACAGGAC...CTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | ACTCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGCGTCGAAGTTGTTTGTaGTGCTCTTCAGTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: THADGAGLWKLYVFLLQRRRSCL*CSSVHG Trigger: TCCATGAACTGAAGAGCATCACAAACAACTTCGACG...CCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | TTACAGGAGCATGAAGTTCCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGCTGTGCAGTTCGTGGTaGCCCAGTCAAACAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQEHEVPIKNQKPALRLKLCSSW*PSQTAV Trigger: AACTGCTGTTTGACTGGGGCACCACGAACTGCACAG...CTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR GCA 90 bp | ACTCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGCTGTTTTTCTTCTCATaGAGACACTGGCTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: THADGAGLWKLYVFLLQRLFFFS*RHWLAA Trigger: TGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAG...CCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | TTACAGGAGCATGAAGTTCCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGCAACTGTGCAGTTCGTaGTGCCCCAGTCAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQEHEVPIKNQKPALRLKQLCSS*CPSQTA Trigger: TGCTGTTTGACTGGGGCACCACGAACTGCACAGTTG...CTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | TACATGTTTTATTGCCCATTGCAGAGACAATACAAGCACACACACACACACCCTGGAACCGAGTGTCGCTaGACTCTACACTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMFYCPLQRQYKHTHTHPGTECR*TLHFCC Trigger: ACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCC...AGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGAATGCTCTTCAGTTCATaGAACGAGAAGCTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCRWSRPVEVICLFTSAGMLFSS*NEKLWN Trigger: GTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCAT...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | CCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGCAGCTAAGAGCTGGTCCAACCTTTGCAATGTCTaGCCGTCTGTTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PIKNQKPALRLKAAKSWSNLCNV*PSVFLL Trigger: GAGAAGAAAAACAGACGGCCAGACATTGCAAAGGTT...GGACCAGCTCTTAGCTGCCTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CAA 72 bp | AGACAGCTTGGCCTCAGTTACATGTTTTATTGCCCATaGCAGAGACAATACAAGCACACACACACACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQLGLSYMFYCP*QRQYKHTHTHP Trigger: AGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTAACTGAGGCCAAGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | TCATGCAGATGGAGCAGGCCTGTGGAAGTTATATGTCTTTTTACTTCAGCGGGATTCTTCCACCCTTCTTaGGGATCAATAAAATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SCRWSRPVEVICLFTSAGFFHPS*GSIKSD Trigger: GTCGGATTTTATTGATCCTCAAGAAGGGTGGAAGAA...TCCCGCTGAAGTAAAAAGACATATAACTTCCACAGGCCTGCTCCATCTGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| 3UTR CAA 72 bp | TACAAGCACACACACACACACCCTCCAAACTCACTATaGGTTCTGTTATACCCCACGTATAGTACCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YKHTHTHPPNSL*VLLYPTYSTMY Trigger: ATACATGGTACTATACGTGGGGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | AATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTTATACCTTAGTTCTTCAGTACTaGTTTCAACCATCGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NTSTHTHTLQTHYWFCYTLVLQY*FQPSLR Trigger: TCGGAGCGATGGTTGAAATCAGTACTGAAGAACTAA...GGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | TTACAGGAGCATGAAGTTCCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGTTCTCATGCAGACACTaGCTAGCAGCAGAGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: LQEHEVPIKNQKPALRLKFSCRH*LAAEYI Trigger: AATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAA...CTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGGAACTTCATGCTCCTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | GAACATTTCTGCAGTTTACAAAGTGGGGTGTTGCTACCAGATCTCCATATATCTTTCTCATGCAGACACTaGCTAGCAGCAGAGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: EHFCSLQSGVLLPDLHISFSCRH*LAAEYI Trigger: AATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAA...AGATATATGGAGATCTGGTAGCAACACCCCACTTTGTAAACTGCAGAAATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR GCA 90 bp | TACATGTTTTATTGCCCATTGCAGAGACAATACAAGCACACACACACACACCCTCTCGTGCTGACACGTTaGCATTACTTTAATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YMFYCPLQRQYKHTHTHPLVLTR*HYFNFL Trigger: CAAGAAATTAAAGTAATGGCAACGTGTCAGCACGAG...AGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CCA 90 bp | ACGGAATGGCTGATTCCATTCATTATAGAGGCATTCCTTTGTCCATTGATAGAGTGTAGATGTCAGATTTaGGTGTTATTTCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEWLIPFIIEAFLCPLIECRCQI*VLFLPA Trigger: TGCGGGGAGAAATAACACCCAAATCTGACATCTACA...CTCTATCAATGGACAAAGGAATGCCTCTATAATGAATGGAATCAGCCATTCCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR TCA 90 bp | AAAGACATTTCAGCTACAAGAAACAGTCTTGAGATGAAGTCTTTCTGGGACCTTTTAGTTCTTCAGTACTaGTTTCAACCATCGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KDISATRNSLEMKSFWDLLVLQY*FQPSLR Trigger: TCGGAGCGATGGTTGAAATCAGTACTGAAGAACTAA...AAGGTCCCAGAAAGACTTCATCTCAAGACTGTTTCTTGTAGCTGAAATGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS CCA 90 bp | TGTGCCACTGTTGCCGCTTCTCTAGGAGGCAGGCTTTTGACGGTTTaGGGAACGGCATCCGGCAGCAGGAGAGTGGCGGGGGCAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CATVAASLGGRLLTV*GTASGSRRVAGANS Trigger: GCTGTTTGCCCCCGCCACTCTCCTGCTGCCGGATGCCGTTCCCCAAACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAACAGTGGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS TCA 90 bp | CTTCGGGTGCCATGTAAGCCGTTGTGCCCACGATTCGGCTGGTCATaGCCGTCTGCGCTAGCCTTGCCGAAGCCCGTGCAAGCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVPCKPLCPRFGWS*PSALALPKPVQAQS Trigger: ACTTTGGGCTTGCACGGGCTTCGGCAAGGCTAGCGCAGACGGTCATGACCAGCCGAATCGTGGGCACAACGGCTTACATGGCACCCGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS GCA 90 bp | TCTGGACCAGTAGATCCACAAGGTCGCCAACTGTGCAGTTCGTGGTaGCCCAGTCAAACAGCAGTTCACAGGTGGGGCTCTTCCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGPVDPQGRQLCSSW*PSQTAVHRWGSSRS Trigger: AGACCGGGAAGAGCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTACTGGTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS CCA 90 bp | CAATCTGGACCAGTAGATCCACAAGGTCGCCAACTGTGCAGTTCGTaGTGCCCCAGTCAAACAGCAGTTCACAGGTGGGGCTCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSGPVDPQGRQLCSS*CPSQTAVHRWGSSR Trigger: CCGGGAAGAGCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTACTGGTCCAGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS CCA 90 bp | GTGGTGTACCATCCAGGCAGGACAGTCTGTCCAGCAAGGACCCGTTaGGCATGTAAGCATACACTAAGCACAGGTTGTCGCTGTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVYHPGRTVCPARTR*ACKHTLSTGCRCRW Trigger: CCAGCGACAGCGACAACCTGTGCTTAGTGTATGCTTACATGCCCAACGGGTCCTTGCTGGACAGACTGTCCTGCCTGGATGGTACACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS TCA 90 bp | TCCGGTTGCCACCGGCAGACGCGGGTTGCTCGTCGAAGTTGTTTGTaGTGCTCTTCAGTTCATGGAACGAGAAGCTGTGGAACCGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGCHRQTRVARRSCL*CSSVHGTRSCGTEC Trigger: ACACTCGGTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCATCACAAACAACTTCGACGAGCAACCCGCGTCTGCCGGTGGCAACCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS GCA 90 bp | CAAACAGCTCAATCTGGACCAGTAGATCCACAAGGTCGCCAACTGTaGAGTTCGTGGTGCCCCAGTCAAACAGCAGTTCACAGGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTAQSGPVDPQGRQL*SSWCPSQTAVHRWG Trigger: GCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTACTGGTCCAGATTGAGCTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 90 bp | TGCTCTTCAGTTCATGGAACGAGAAGCTGTGGAACCGAGTGTCGCTaGACTCTACACTTCTGTTGTCTGGGCTTGAGGAGTCCGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSVHGTRSCGTECR*TLHFCCLGLRSPVA Trigger: AGCCACCGGACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCGACAGCTACAGATGGATGTGATCAGAAAGGTGGGCCGTGCCGTTTCAGCTACACTAAGCACAGGTaGTCGCTGTCGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RATATDGCDQKGGPCRFSYTKHR*SLSLEK Trigger: CTTCTCCAGCGACAGCGACAACCTGTGCTTAGTGTA...GCTGAAACGGCACGGCCCACCTTTCTGATCACATCCATCTGTAGCTGTCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCAAAACCGAAAGGTCCTTaGCAATGTCTGGCCGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRAALRGCTSVSQKGWKAKPKGP*QCLAVC Trigger: ACAGACGGCCAGACATTGCAAAGGACCTTTCGGTTT...TGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| CDS GCA 90 bp | CATTACGGATGTCCTGTCCTTTTCCTGACAAGGCCCGTGTGTTTGTaGCACTGTTGCCGCTTCTCTAGGAGGCAGGCTTTTGACGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HYGCPVLFLTRPVCL*HCCRFSRRQAFDGL Trigger: CAAACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAACAGTGGCACAAACACACGGGCCTTGTCAGGAAAAGGACAGGACATCCGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 90 bp | GTAGATGTCAGATTTGGGTGTTATTTCTCCCCGCAAAGCTTCGGGTaGCATGTAAGCCGTTGTGCCCACGATTCGGCTGGTCATGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VDVRFGCYFSPQSFG*HVSRCAHDSAGHDR Trigger: ACGGTCATGACCAGCCGAATCGTGGGCACAACGGCTTACATGGCACCCGAAGCTTTGCGGGGAGAAATAACACCCAAATCTGACATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS-3UTR CAA 90 bp | TTTAGAGCCGCGCTGAGAGGCTGCACTAGTGTCTCCCAGAAGGGATGGAAGGCATCGCCGGACGGCTTTTaGATAGCTACTGCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRAALRGCTSVSQKGWKASPDGF*IATANF Trigger: GAAATTAGCAGTAGCTATCAAAAAGCCGTCCGGCGA...TGCCTTCCATCCCTTCTGGGAGACACTAGTGCAGCCTCTCAGCGCGGCTCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| CDS CCA 90 bp | CAACTGTGCAGTTCGTGGTGCCCCAGTCAAACAGCAGTTCACAGGTaGGGCTCTTCCCGGTCTGAAGTAAGGCTTCGAATCTCCTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: QLCSSWCPSQTAVHR*GSSRSEVRLRISLY Trigger: ATATAAGGAGATTCGAAGCCTTACTTCAGACCGGGAAGAGCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 90 bp | ACCTTTGCAATGTCTGGCCGTCTGTTTTTCTTCTCATGCAGACACTaGCTAGCAGCAGAGTACATTGCTTCCACCGAAGCAGGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSGRLFFFSCRH*LAAEYIASTEAGSA Trigger: TGCGGACCCTGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACATTGCAAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| CDS CCA 90 bp | TCCTTTGCAATGTCTGGCCGTCTGTTTTTCTTCTCATGCAGACACTaGCTAGCAGCAGAGTACATTGCTTCCACCGAAGCAGGGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFAMSGRLFFFSCRH*LAAEYIASTEAGSA Trigger: TGCGGACCCTGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACATTGCAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS GCA 90 bp | TCTGTTTTTCTTCTCATGCAGACACTGGCTAGCAGCAGAGTACATTaGTTCCACCGAAGCAGGGTCCGCATCGCTCATCTTCTCATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFLLMQTLASSRVH*FHRSRVRIAHLLIR Trigger: ACGGATGAGAAGATGAGCGATGCGGACCCTGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 90 bp | TTATCAGCTCCAACAGAACCACGCCGAAGCTGTAGATGTCAGATTTaGGTGTTATTTCTCCCCGCAAAGCTTCGGGTGCCATGTAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPTEPRRSCRCQI*VLFLPAKLRVPCKP Trigger: CGGCTTACATGGCACCCGAAGCTTTGCGGGGAGAAATAACACCCAAATCTGACATCTACAGCTTCGGCGTGGTTCTGTTGGAGCTGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS GCA 90 bp | ACCGAAAGGTCCTTTGCAATGTCTGGCCGTCTGTTTTTCTTCTCATaGAGACACTGGCTAGCAGCAGAGTACATTGCTTCCACCGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TERSFAMSGRLFFFS*RHWLAAEYIASTEA Trigger: TGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACATTGCAAAGGACCTTTCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS CCA 90 bp | TCGAAGTTGTTTGTGATGCTCTTCAGTTCATGGAACGAGAAGCTGTaGAACCGAGTGTCGCTGGACTCTACACTTCTGTTGTCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKLFVMLFSSWNEKL*NRVSLDSTLLLSGL Trigger: AAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCATCACAAACAACTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS GCA 90 bp | ATCTCTATGAATGTGATGATTTTCATGCAGAAACCTGATGCCATTTaGTGTCCCCTGAGCAACCTTGCACCTTGTGTGCCAGGAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISMNVMIFMQKPDAI*CPLSNLAPCVPGKR Trigger: CCGCTTTCCTGGCACACAAGGTGCAAGGTTGCTCAGGGGACAGCAAATGGCATCAGGTTTCTGCATGAAAATCATCACATTCATAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS-3UTR CAA 90 bp | CCTATCAAAAACCAAAAGCCAGCACTAAGGCTTAAGGCAGCTAAGAGCTGGTCCTCGCCGGACGGCTTTTaGATAGCTACTGCTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PIKNQKPALRLKAAKSWSSPDGF*IATANF Trigger: GAAATTAGCAGTAGCTATCAAAAAGCCGTCCGGCGA...GGACCAGCTCTTAGCTGCCTTAAGCCTTAGTGCTGGCTTTTGGTTTTTGATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CAA 90 bp | TACATGTTTTATTGCCCATTGCAGAGACAATACAAGCACACACACACACACCCTGACTCTACACTTCTGTaGTCTGGGCTTGAGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YMFYCPLQRQYKHTHTHPDSTLL*SGLEES Trigger: GGACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTC...AGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CAA 90 bp | TACATGTTTTATTGCCCATTGCAGAGACAATACAAGCACACACACACACACCCTTACACTAAGCACAGGTaGTCGCTGTCGCTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YMFYCPLQRQYKHTHTHPYTKHR*SLSLEK Trigger: CTTCTCCAGCGACAGCGACAACCTGTGCTTAGTGTA...AGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATGGGCAATAAAACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CAA 90 bp | ACTCTAGGTAGCCCAGGGGATGAAGGAGCAAGTGAGGGGTTTGAATTCATAAGGCCAAAGTCAGATATTTaGGCAGTAAAGTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLGSPGDEGASEGFEFIRPKSDI*AVKSLS Trigger: AGACAAAGACTTTACTGCCAAAATATCTGACTTTGG...CCTTATGAATTCAAACCCCTCACTTGCTCCTTCATCCCCTGGGCTACCTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CAA 90 bp | CATTGCAGAGACAATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTTCTTCCACCCTTCTaGAGGATCAATAAAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HCRDNTSTHTHTLQTHYWFLPPF*RINKIR Trigger: TCGGATTTTATTGATCCTCAAGAAGGGTGGAAGAAA...CCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATTGTCTCTGCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS-3UTR CAA 90 bp | GAACATTTCTGCAGTTTACAAAGTGGGGTGTTGCTACCAGATCTCCATATATCTTTTCTTCCACCCTTCTaGAGGATCAATAAAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EHFCSLQSGVLLPDLHISFLPPF*RINKIR Trigger: TCGGATTTTATTGATCCTCAAGAAGGGTGGAAGAAA...AGATATATGGAGATCTGGTAGCAACACCCCACTTTGTAAACTGCAGAAATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
||
| CDS-3UTR CAA 90 bp | AATACAAGCACACACACACACACCCTCCAAACTCACTATTGGTTCTGTTATACCCCAAAGTCAGATATTTaGGCAGTAAAGTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NTSTHTHTLQTHYWFCYTPKSDI*AVKSLS Trigger: AGACAAAGACTTTACTGCCAAAATATCTGACTTTGG...GGTATAACAGAACCAATAGTGAGTTTGGAGGGTGTGTGTGTGTGTGCTTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
||
| CDS GCA 72 bp | GCCGTTGTGCCCACGATTCGGCTGGTCATGACCGTCTaGGCTAGCCTTGCCGAAGCCCGTGCAAGCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVVPTIRLVMTV*ASLAEARASPK Trigger: CTTTGGGCTTGCACGGGCTTCGGCAAGGCTAGCGCAGACGGTCATGACCAGCCGAATCGTGGGCACAACGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS CCA 72 bp | GTTGCCGCTTCTCTAGGAGGCAGGCTTTTGACGGTTTaGGGAACGGCATCCGGCAGCAGGAGAGTGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAASLGGRLLTV*GTASGSRRVAG Trigger: CCCCGCCACTCTCCTGCTGCCGGATGCCGTTCCCCAAACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
||
| CDS CAA 72 bp | TGTTGCCGCTTCTCTAGGAGGCAGGCTTTTGACGGTTaGGGGAACGGCATCCGGCAGCAGGAGAGTGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCRFSRRQAFDG*GNGIRQQESGG Trigger: CCCGCCACTCTCCTGCTGCCGGATGCCGTTCCCCAAACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | CCATGTAAGCCGTTGTGCCCACGATTCGGCTGGTCATaGCCGTCTGCGCTAGCCTTGCCGAAGCCCGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PCKPLCPRFGWS*PSALALPKPVQ Trigger: TTGCACGGGCTTCGGCAAGGCTAGCGCAGACGGTCATGACCAGCCGAATCGTGGGCACAACGGCTTACATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 72 bp | CTGTGGAACCGAGTGTCGCTGGACTCTACACTTCTGTaGTCTGGGCTTGAGGAGTCCGGTGGCTCGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWNRVSLDSTLL*SGLEESGGSQL Trigger: CAGCTGCGAGCCACCGGACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | CCCTCTCCCATCCGGTTGCCACCGGCAGACGCGGGTTaGTCGTCGAAGTTGTTTGTGATGCTCTTCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSPIRLPPADAG*SSKLFVMLFSS Trigger: TGAACTGAAGAGCATCACAAACAACTTCGACGAGCAACCCGCGTCTGCCGGTGGCAACCGGATGGGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | CCAGTAGATCCACAAGGTCGCCAACTGTGCAGTTCGTaGTGCCCCAGTCAAACAGCAGTTCACAGGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PVDPQGRQLCSS*CPSQTAVHRWG Trigger: GCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 90 bp | AACGAGAAGCTGTGGAACCGAGTGTCGCTGGACTCTACACTTCTGTaGTCTGGGCTTGAGGAGTCCGGTGGCTCGCAGCTGTGTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: NEKLWNRVSLDSTLL*SGLEESGGSQLCSS Trigger: GCTAGAACACAGCTGCGAGCCACCGGACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAGCTTCTCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | GTAGATCCACAAGGTCGCCAACTGTGCAGTTCGTGGTaGCCCAGTCAAACAGCAGTTCACAGGTGGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VDPQGRQLCSSW*PSQTAVHRWGS Trigger: AGAGCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 72 bp | GAGTGTCGCTGGACTCTACACTTCTGTTGTCTGGGCTaGAGGAGTCCGGTGGCTCGCAGCTGTGTTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: ECRWTLHFCCLG*RSPVARSCVLA Trigger: AGCTAGAACACAGCTGCGAGCCACCGGACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | AGTTCGTGGTGCCCCAGTCAAACAGCAGTTCACAGGTaGGGCTCTTCCCGGTCTGAAGTAAGGCTTCGAATC | + |
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Preference number: 6 (lower is better) Translates to: SSWCPSQTAVHR*GSSRSEVRLRI Trigger: GATTCGAAGCCTTACTTCAGACCGGGAAGAGCCCCACCTGTGAACTGCTGTTTGACTGGGGCACCACGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | TGTAAGCATACACTAAGCACAGGTTGTCGCTGTCGCTaGAGAAGCCGAGCAGCTCCACCAGGTTCTCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CKHTLSTGCRCR*RSRAAPPGSRA Trigger: AGCACGAGAACCTGGTGGAGCTGCTCGGCTTCTCCAGCGACAGCGACAACCTGTGCTTAGTGTATGCTTACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | CATCCAGGCAGGACAGTCTGTCCAGCAAGGACCCGTTaGGCATGTAAGCATACACTAAGCACAGGTTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: HPGRTVCPARTR*ACKHTLSTGCR Trigger: GCGACAACCTGTGCTTAGTGTATGCTTACATGCCCAACGGGTCCTTGCTGGACAGACTGTCCTGCCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 72 bp | ACCATCGCTCCGAGCTTCTTCACCGCCACGATGGTGTaGTTCACACAGCCCTTGTACACCACTCCAAATCCC | + |
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Preference number: 6 (lower is better) Translates to: TIAPSFFTATMV*FTQPLYTTPNP Trigger: GGGATTTGGAGTGGTGTACAAGGGCTGTGTGAACAACACCATCGTGGCGGTGAAGAAGCTCGGAGCGATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 90 bp | AGGCATTACGGATGTCCTGTCCTTTTCCTGACAAGGCCCGTGTGTTaGTGCCACTGTTGCCGCTTCTCTAGGAGGCAGGCTTTTGACGGT | + |
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Preference number: 6 (lower is better) Translates to: RHYGCPVLFLTRPVC*CHCCRFSRRQAFDG Trigger: ACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAACAGTGGCACAAACACACGGGCCTTGTCAGGAAAAGGACAGGACATCCGTAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | TTCGGCATAGGCATTACGGATGTCCTGTCCTTTTCCTaGCAAGGCCCGTGTGTTTGTGCCACTGTTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: FGIGITDVLSFS*QGPCVCATVAA Trigger: AGCGGCAACAGTGGCACAAACACACGGGCCTTGTCAGGAAAAGGACAGGACATCCGTAATGCCTATGCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | CACCGGCAGACGCGGGTTGCTCGTCGAAGTTGTTTGTaGTGCTCTTCAGTTCATGGAACGAGAAGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HRQTRVARRSCL*CSSVHGTRSCG Trigger: TCCACAGCTTCTCGTTCCATGAACTGAAGAGCATCACAAACAACTTCGACGAGCAACCCGCGTCTGCCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | CAATCTGGACCAGTAGATCCACAAGGTCGCCAACTGTaGAGTTCGTGGTGCCCCAGTCAAACAGCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QSGPVDPQGRQL*SSWCPSQTAVH Trigger: GTGAACTGCTGTTTGACTGGGGCACCACGAACTGCACAGTTGGCGACCTTGTGGATCTACTGGTCCAGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | CTTTTCCTGACAAGGCCCGTGTGTTTGTGCCACTGTTaGCGCTTCTCTAGGAGGCAGGCTTTTGACGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFLTRPVCLCHC*RFSRRQAFDGL Trigger: CAAACCGTCAAAAGCCTGCCTCCTAGAGAAGCGGCAACAGTGGCACAAACACACGGGCCTTGTCAGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | TGTCCTGTCCTTTTCCTGACAAGGCCCGTGTGTTTGTaGCACTGTTGCCGCTTCTCTAGGAGGCAGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: CPVLFLTRPVCL*HCCRFSRRQAF Trigger: AAAAGCCTGCCTCCTAGAGAAGCGGCAACAGTGGCACAAACACACGGGCCTTGTCAGGAAAAGGACAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | AGATTTGGGTGTTATTTCTCCCCGCAAAGCTTCGGGTaGCATGTAAGCCGTTGTGCCCACGATTCGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RFGCYFSPQSFG*HVSRCAHDSAG Trigger: ACCAGCCGAATCGTGGGCACAACGGCTTACATGGCACCCGAAGCTTTGCGGGGAGAAATAACACCCAAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | CTTCTCATGCAGACACTGGCTAGCAGCAGAGTACATTaGTTCCACCGAAGCAGGGTCCGCATCGCTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: LLMQTLASSRVH*FHRSRVRIAHL Trigger: AAGATGAGCGATGCGGACCCTGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | GTTCATGGAACGAGAAGCTGTGGAACCGAGTGTCGCTaGACTCTACACTTCTGTTGTCTGGGCTTGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VHGTRSCGTECR*TLHFCCLGLRS Trigger: ACTCCTCAAGCCCAGACAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAGCTTCTCGTTCCATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | TTTCAACCATCGCTCCGAGCTTCTTCACCGCCACGATaGTGTTGTTCACACAGCCCTTGTACACCACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FQPSLRASSPPR*CCSHSPCTPLQ Trigger: TTGGAGTGGTGTACAAGGGCTGTGTGAACAACACCATCGTGGCGGTGAAGAAGCTCGGAGCGATGGTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | CCAACAGAACCACGCCGAAGCTGTAGATGTCAGATTTaGGTGTTATTTCTCCCCGCAAAGCTTCGGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTEPRRSCRCQI*VLFLPAKLRVP Trigger: TGGCACCCGAAGCTTTGCGGGGAGAAATAACACCCAAATCTGACATCTACAGCTTCGGCGTGGTTCTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | TTTTCATGCAGAAACCTGATGCCATTTGCTGTCCCCTaGGCAACCTTGCACCTTGTGTGCCAGGAAAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: FSCRNLMPFAVP*ATLHLVCQESG Trigger: ACCGCTTTCCTGGCACACAAGGTGCAAGGTTGCTCAGGGGACAGCAAATGGCATCAGGTTTCTGCATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CCA 72 bp | ATGTCTGGCCGTCTGTTTTTCTTCTCATGCAGACACTaGCTAGCAGCAGAGTACATTGCTTCCACCGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: MSGRLFFFSCRH*LAAEYIASTEA Trigger: TGCTTCGGTGGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | ACCTTTGCAATGTCTGGCCGTCTGTTTTTCTTCTCATaGAGACACTGGCTAGCAGCAGAGTACATTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TFAMSGRLFFFS*RHWLAAEYIAS Trigger: GGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACATTGCAAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074936.10 |
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| CDS GCA 72 bp | TCCTTTGCAATGTCTGGCCGTCTGTTTTTCTTCTCATaGAGACACTGGCTAGCAGCAGAGTACATTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SFAMSGRLFFFS*RHWLAAEYIAS Trigger: GGAAGCAATGTACTCTGCTGCTAGCCAGTGTCTGCATGAGAAGAAAAACAGACGGCCAGACATTGCAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109248.2 |
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| CDS CCA 72 bp | TTTGTGATGCTCTTCAGTTCATGGAACGAGAAGCTGTaGAACCGAGTGTCGCTGGACTCTACACTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FVMLFSSWNEKL*NRVSLDSTLLL Trigger: CAACAGAAGTGTAGAGTCCAGCGACACTCGGTTCCACAGCTTCTCGTTCCATGAACTGAAGAGCATCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | TCATCTTCAATCTCTTCTTTAATATCCAGCAGTAGTTaGGGTTCACGGTTTTCATCCACAGCCGCCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSSISSLISSSS*GSRFSSTAASP Trigger: CGGGCTGGCGGCTGTGGATGAAAACCGTGAACCTCAACTACTGCTGGATATTAAAGAAGAGATTGAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | GCCGAGCAGCTCCACCAGGTTCTCGTGCTGACACGTTaGCATTACTTTAATTTCTTGATCAAACTGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AEQLHQVLVLTR*HYFNFLIKLLL Trigger: AAGCAACAGTTTGATCAAGAAATTAAAGTAATGGCAACGTGTCAGCACGAGAACCTGGTGGAGCTGCTCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS GCA 72 bp | AATGTGATGATTTTCATGCAGAAACCTGATGCCATTTaGTGTCCCCTGAGCAACCTTGCACCTTGTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: NVMIFMQKPDAI*CPLSNLAPCVP Trigger: TGGCACACAAGGTGCAAGGTTGCTCAGGGGACAGCAAATGGCATCAGGTTTCTGCATGAAAATCATCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS CAA 72 bp | AAATCCGACAGCTTCCTAAGGATCCCCACATTAAGGTaGCGTATGTATGTCGATGGTGTCAACGGCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KSDSFLRIPTLR*RMYVDGVNGLF Trigger: GAACAAGCCGTTGACACCATCGACATACATACGCAACCTTAATGTGGGGATCCTTAGGAAGCTGTCGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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| CDS TCA 72 bp | TTTTTGATAGCTACTGCTAATTTCTTCCACCCTTCTTaGGGATCAATAAAATCCGACAGCTTCCTAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: FLIATANFFHPS*GSIKSDSFLRI Trigger: GATCCTTAGGAAGCTGTCGGATTTTATTGATCCTCAAGAAGGGTGGAAGAAATTAGCAGTAGCTATCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074936.10 ENSMUST00000109248.2 |
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