Pregenerated sensors for IRAK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060477Ensembl transcript IDs: ENSMUST00000059286.14, ENSMUST00000089022.9, ENSMUST00000089023.11, ENSMUST00000204744.3
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTaGATAGAGCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: FSKCFCSRCTHPPKS*IEQLCSSPGRTEQG Trigger: ACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGCTCTATTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR GCA 90 bp | AAAGGTGCCCTCGCTGATTCGGTGGCTTTGGTCAAAGTCCTCAGTTaGTTGGACGACATCTGCTTCACTCCAGAAAAGCCTGTCTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: KGALADSVALVKVLS*LDDICFTPEKPVSG Trigger: CCCGGAGACAGGCTTTTCTGGAGTGAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGCCACCGAATCAGCGAGGGCACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR GCA 90 bp | GATTCGGTGGCTTTGGTCAAAGTCCTCAGTTGCTTGGACGACATCTaGTTCACTCCAGAAAAGCCTGTCTCCGGGCAAACCCAAAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: DSVALVKVLSCLDDI*FTPEKPVSGQTQKP Trigger: AGGCTTTTGGGTTTGCCCGGAGACAGGCTTTTCTGGAGTGAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGCCACCGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR CCA 90 bp | GATGAAGCCATGTTTCCTTCTGTTCAGGCTGATGTTTGGGTTGTGTaGGTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: DEAMFPSVQADVWVV*VSTDLGQPKTSSLP Trigger: AGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTGAACAGAAGGAAACATGGCTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 90 bp | CTCGACTCTGATGAAGCCATGTTTCCTTCTGTTCAGGCTGATGTTTaGGTTGTGTGGGTCTCAACAGACCTTGGGCAGCCAAAGACCTCT | + |
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Preference number: 1 (lower is better) Translates to: LDSDEAMFPSVQADV*VVWVSTDLGQPKTS Trigger: AGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTGAACAGAAGGAAACATGGCTTCATCAGAGTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR TCA 90 bp | GTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTaGGCTACCACCCACCAAGTGATTGACTTAACTAGCAGCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: VLPQGEQSRVILQGY*ATTHQVIDLTSSRI Trigger: GATTCTGCTGCTAGTTAAGTCAATCACTTGGTGGGTGGTAGCTCAGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR TCA 90 bp | AGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATaGCTGACAGATGATAACTCTGGAAAACGCCACGGATGCTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RSFKKWEFAESCLQI*LTDDNSGKRHGCCR Trigger: CCTGCAGCATCCGTGGCGTTTTCCAGAGTTATCATCTGTCAGTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR TCA 90 bp | CTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACTaGCAGATGATAACTCTGGAAAACGCCACGGATGCTGCAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: LLRSGNLQKAVYKYD*QMITLENATDAAGL Trigger: CAATCCTGCAGCATCCGTGGCGTTTTCCAGAGTTATCATCTGTCAGTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CAA 90 bp | GGCCACCTCCCTGAGCTTCTTGAAGGCGAAGGCCACACCGTTCCTTaGACCCTGGTAGATATCGGCAAAGGTGCCCTCGCTGATTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: GHLPELLEGEGHTVP*TLVDIGKGALADSV Trigger: CACCGAATCAGCGAGGGCACCTTTGCCGATATCTACCAGGGTCAAAGGAACGGTGTGGCCTTCGCCTTCAAGAAGCTCAGGGAGGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTTTGCAGTCCTGAACTTGGTGTCTGTATAAGCTaGGGTCCCCTACCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: EKAYGVLCQPSCFCSPELGVCIS*GPLPPP Trigger: GGGTGGGGGTAGGGGACCTCAGCTTATACAGACACC...AAGTTCAGGACTGCAAAAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CAA 90 bp | TCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTaGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCTGTGCGCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: STDLGQPKTSSLPGR*SVQLRIRVFSCALV Trigger: GACCAGCGCACAGCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CAA 90 bp | CTTCTGTTCAGGCTGATGTTTGGGTTGTGTGGGTCTCAACAGACCTaGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLFRLMFGLCGSQQT*GSQRPLPCLDVCLS Trigger: GGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTGAACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTGGGGTGGTCCAAAGACCTCTTCCCTaGCTGGACGTTTGTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VRCGELRGLGATASLGVVQRPLP*LDVCLS Trigger: GGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTG...GACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTGGGGTGGTCTCCTTCTGTTCAGGCTaGTGTTTGGGTTGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VRCGELRGLGATASLGVVSFCSG*CLGCVG Trigger: ACCCACACAACCCAAACATCAGCCTGAACAGAAGGA...GACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCACAAAGACCTCTTCCCTaGCTGGACGTTTGTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LQDCSVRCGELRGLGATAQRPLP*LDVCLS Trigger: GGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTG...TGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGTCAACAACGTGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGCTCAGAGAGGAGGAGTaGTTCCTGGATATGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GWSTTWVPRNHKNHPNPWLREEE*FLDMVS Trigger: AGACACCATATCCAGGAAGCACTCCTCCTCTCTGAG...CCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCACGTTGTTGACCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CAA 90 bp | CCTACGGAGTCCTTTGCCAACCGTCCTGCTTTTGCAGTCCTGAACTaGAGAACTTGCGGAGACACCGGCTGTAGGTCTTTTAAGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTESFANRPAFAVLN*RTCGDTGCRSFKKW Trigger: CCACTTCTTAAAAGACCTACAGCCGGTGTCTCCGCAAGTTCTCAAGTTCAGGACTGCAAAAGCAGGACGGTTGGCAAAGGACTCCGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAACAGCATCTCTTGGGGTaGTCAACAACGTGGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: IHFQSASAAAAPILPRAEQHLLG*STTWVP Trigger: GGGAACCCACGTTGTTGACCACCCCAAGAGATGCTG...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCCTCAGAGAGGAGGAGTaGTTCCTGGATATGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPLREEE*FLDMVS Trigger: AGACACCATATCCAGGAAGCACTCCTCCTCTCTGAG...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTACAGGATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAGGTCTCAACAGACCTTaGGCAGCCAAAGACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: WLTGSPTEEGESLRSPLPGLNRP*AAKDLF Trigger: GAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACC...TGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATCCTGTAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTGGGGTGGTCAGTGCTTCCTGGATATaGTGTCTGTATAAGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VRCGELRGLGATASLGVVSASWI*CLYKLR Trigger: CCTCAGCTTATACAGACACCATATCCAGGAAGCACT...GACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTGACCTCTTCCCTGCCTaGACGTTTGTCTGTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVDLFPA*TFVCPV Trigger: AACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCAGTGCTTCCTGGATATaGTGTCTGTATAAGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCSASWI*CLYKLR Trigger: CCTCAGCTTATACAGACACCATATCCAGGAAGCACT...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTTCCTTCTGTTCAGGCTaGTGTTTGGGTTGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVSFCSG*CLGCVG Trigger: ACCCACACAACCCAAACATCAGCCTGAACAGAAGGA...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR TCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTGTCTACAAATATGACTaGCAGATGATAACTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPTEEGESLRSPLPTVLLVYKYD*QMITLE Trigger: TTCCAGAGTTATCATCTGTCAGTCATATTTGTAGAC...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAGCTGTCTACAAATATaGCTGACAGATGATAACTCT | + |
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Preference number: 2 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPSCLQI*LTDDNS Trigger: AGAGTTATCATCTGTCAGTCATATTTGTAGACAGCT...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTGTCTACAAATATGACTaGCAGATGATAACTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AALFFPRENRAGLSYKDTVYKYD*QMITLE Trigger: TTCCAGAGTTATCATCTGTCAGTCATATTTGTAGAC...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACGGTCTCAACAGACCTTaGGCAGCCAAAGACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDGLNRP*AAKDLF Trigger: GAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACC...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAAAGGTCTTTTAAGAAGTaGGAATTTGCAGAAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IHFQSASAAAAPILPRAERSFKK*EFAESC Trigger: ACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCT...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATATTGCTCTGTCCGTTGTaGAGAACTAAGAGGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: WQSHELHTFYSIENTEQILLCPL*RTKRFG Trigger: CCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAA...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAAGGTCTTTTAAGAAGTaGGAATTTGCAGAAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: WQSHELHTFYSIENTEQIRSFKK*EFAESC Trigger: ACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCT...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | GAACAAGGGGCATCCATCTCGCACGGACGCTGCCGCTaGGCCCCAGCCATGATGGGCCCTGTGTCTAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: EQGASISHGRCR*APAMMGPVSRR Trigger: CCTTCTAGACACAGGGCCCATCATGGCTGGGGCCCAGCGGCAGCGTCCGTGCGAGATGGATGCCCCTTGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR TCA 72 bp | TGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTaGATAGAGCAGCTCTGTTCTTCCCCAGGGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: CFCSRCTHPPKS*IEQLCSSPGRT Trigger: TGTTCTCCCTGGGGAAGAACAGAGCTGCTCTATTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | TGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTaGGGTGGTCAACAACGTGGGTTCCCCGGAACCACA | + |
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Preference number: 3 (lower is better) Translates to: WRTKRFGGNSIS*GGQQRGFPGTT Trigger: TGTGGTTCCGGGGAACCCACGTTGTTGACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CAA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCGGGCAACAGCATCTCTaGGGGTGGTCAACAACGTGG | + |
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Preference number: 3 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPGQQHL*GWSTTW Trigger: CCACGTTGTTGACCACCCCAAGAGATGCTGTTGCCC...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | AACGCCACGGATGCTGCAGGATTGCTCTGTCCGTTGTaGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: NATDAAGLLCPL*RTKRFGGNSIS Trigger: AGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGTGGCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR GCA 72 bp | GCTTTGGTCAAAGTCCTCAGTTGCTTGGACGACATCTaGTTCACTCCAGAAAAGCCTGTCTCCGGGCAAACC | + |
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Preference number: 3 (lower is better) Translates to: ALVKVLSCLDDI*FTPEKPVSGQT Trigger: GGTTTGCCCGGAGACAGGCTTTTCTGGAGTGAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR CCA 72 bp | ATATCGGCAAAGGTGCCCTCGCTGATTCGGTGGCTTTaGTCAAAGTCCTCAGTTGCTTGGACGACATCTGCT | + |
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Preference number: 3 (lower is better) Translates to: ISAKVPSLIRWL*SKSSVAWTTSA Trigger: AGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGCCACCGAATCAGCGAGGGCACCTTTGCCGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR-3UTR CAA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCCGTTTGTCTGTCCAGTaGAGAATAAGGGTCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCRLSVQ*RIRVFS Trigger: GCTGAAGACCCTTATTCTCAACTGGACAGACAAACG...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR-3UTR CAA 90 bp | GATTCGGTGGCTTTGGTCAAAGTCCTCAGTTGCTTGGACGACATCTGCTTCACTACCCAAAAGCCTTTCTaGCTTGGGGGCAGATGTGGA | + |
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Preference number: 3 (lower is better) Translates to: DSVALVKVLSCLDDICFTTQKPF*LGGRCG Trigger: TCCACATCTGCCCCCAAGCAAGAAAGGCTTTTGGGT...AGTGAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGCCACCGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR TCA 72 bp | TTTGACCCTGGTAGATATCGGCAAAGGTGCCCTCGCTaGTTCGGTGGCTTTGGTCAAAGTCCTCAGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: FDPGRYRQRCPR*FGGFGQSPQLL Trigger: AAGCAACTGAGGACTTTGACCAAAGCCACCGAATCAGCGAGGGCACCTTTGCCGATATCTACCAGGGTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
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| 3UTR GCA 72 bp | CACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTaGCAACCGTCCTGCTTTTGCAGTCCTGAACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HQLKKEKAYGVL*QPSCFCSPELE Trigger: CTCAAGTTCAGGACTGCAAAAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | AACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTaGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: NRPWAAKDLFPA*TFVCPVENKGL Trigger: AAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | TGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTTaGATCACATACAAGGTGTTCCACTTCACAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: WVPRNHKNHPNP*ITYKVFHFTAL Trigger: GAGGGCTGTGAAGTGGAACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| 3UTR CCA 72 bp | ATGTTTCCTTCTGTTCAGGCTGATGTTTGGGTTGTGTaGGTCTCAACAGACCTTGGGCAGCCAAAGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MFPSVQADVWVV*VSTDLGQPKTS Trigger: AGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTGAACAGAAGGAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CCA 72 bp | TTGGGGGCAGATGTGGAAGTACTGCAATACTTAGACTaGGGAGAGTCGGGTGCATCAGTTTTCAGGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LGADVEVLQYLD*GESGASVFREQ Trigger: TTGTTCCCTGAAAACTGATGCACCCGACTCTCCCCAGTCTAAGTATTGCAGTACTTCCACATCTGCCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| 3UTR CCA 72 bp | CTGATTCGGTGGCTTTGGTCAAAGTCCTCAGTTGCTTaGACGACATCTGCTTCACTCCAGAAAAGCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LIRWLWSKSSVA*TTSASLQKSLS Trigger: AGACAGGCTTTTCTGGAGTGAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGACCAAAGCCACCGAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| 3UTR CCA 72 bp | GTCGAAGGTGAAAAGCAGGCAGTTCCTAAATACCGGTaGCTTACAGGATCACCAACTGAAGAAGGAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VEGEKQAVPKYR*LTGSPTEEGES Trigger: GCTTTCTCCTTCTTCAGTTGGTGATCCTGTAAGCCACCGGTATTTAGGAACTGCCTGCTTTTCACCTTCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTACAGGATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCATTAAGAAGTGGGAATTaGCAGAAAGCTGTCTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: WLTGSPTEEGESLRSPLPLRSGN*QKAVYK Trigger: TTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAA...TGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATCCTGTAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR TCA 72 bp | AGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACTaGCAGATGATAACTCTGGAAAACGCCACGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGNLQKAVYKYD*QMITLENATDA Trigger: AGCATCCGTGGCGTTTTCCAGAGTTATCATCTGTCAGTCATATTTGTAGACAGCTTTCTGCAAATTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTCTGTCCATGGACCCTaGACTGGAGCCGGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQSVHGP*TGAGHL Trigger: GAGGTGGCCGGCTCCAGTCCAGGGTCCATGGACAGA...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCGCCTGTGCAAGCCTCTaGCGAGGAGTCAGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGACASL*RGVSLL Trigger: CAGGAGGCTGACTCCTCGTCAGAGGCTTGCACAGGC...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCATCTCGCACGGACGCTaGCGCTGGGCCCCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPISHGR*RWAPAM Trigger: CATGGCTGGGGCCCAGCGGCAGCGTCCGTGCGAGAT...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCATCTCGCACGGACGCTaGCGCTGGGCCCCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSISHGR*RWAPAM Trigger: CATGGCTGGGGCCCAGCGGCAGCGTCCGTGCGAGAT...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGGCAGCCCTGAGCAGATaGTGGCCCGCTGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLFPAWTFVCPVENKGLQAALSR*WPAVAR Trigger: CCTGGCCACAGCGGGCCAGCATCTGCTCAGGGCTGC...CTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCCCGTGGCCTGCCGCATaGACCACCACCACAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGPWPAA*TTTTVA Trigger: AGCTACTGTGGTGGTGGTCCATGCGGCAGGCCACGG...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGTGTCTAGAAGGGAACGTGGCTTCACAGGCCGGACTTTCTCCTGTTCATCCAGTCCCACTCACTaGGCGTGTCGATATTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVSRRERGFTGRTFSCSSSPTH*ACRYCG Trigger: GCCGCAATATCGACACGCTCAGTGAGTGGGACTGGA...TGAACAGGAGAAAGTCCGGCCTGTGAAGCCACGTTCCCTTCTAGACACAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| CDS-3UTR GCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAAGCAGCCCTGAGCAGATaGTGGCCCGCTGTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHFQSASAAAAPILPRAEAALSR*WPAVAR Trigger: CCTGGCCACAGCGGGCCAGCATCTGCTCAGGGCTGC...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGCCACTGCCTTCCCCATaGTGGTCTTCCTGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQPLPSP*WSSWSR Trigger: TCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGG...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAACCAGCTGCTGGACCGTaGCCTGCCGCATGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: IHFQSASAAAAPILPRAEPAAGP*PAAWTT Trigger: GGTGGTCCATGCGGCAGGCCACGGTCCAGCAGCTGG...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGGTAGGAATCTGTCCATaGACCCTGGACTGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQVGICP*TLDWSR Trigger: CCGGCTCCAGTCCAGGGTCCATGGACAGATTCCTAC...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGCTGCCTTCCCCATGCTaGTCTTCCTGGAGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQLPSPC*SSWSRL Trigger: CAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAG...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTAGACACTCACAGCGGTaGCCCAGGCTTCCTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLGQPKTSSLPGRLSRHSQR*PRLPHR Trigger: CCTGTGAGGAAGCCTGGGCCACCGCTGTGAGTGTCT...AGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAGACACTCACAGCGGTaGCCCAGGCTTCCTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGRHSQR*PRLPHR Trigger: CCTGTGAGGAAGCCTGGGCCACCGCTGTGAGTGTCT...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTTCCAGTCCCACTCACTaGGCGTGTCGATATTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLGQPKTSSLPGRLSSSPTH*ACRYCG Trigger: GCCGCAATATCGACACGCTCAGTGAGTGGGACTGGA...AGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTGGGGTGGTCATGTCTGAGTTGCCCTaGGCCCAGAGTCTGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRCGELRGLGATASLGVVMSELP*AQSLSC Trigger: GCACGACAGACTCTGGGCTCAGGGCAACTCAGACAT...GACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCGCCTGTGCAAGCCTCTaGCGAGGAGTCAGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPACASL*RGVSLL Trigger: CAGGAGGCTGACTCCTCGTCAGAGGCTTGCACAGGC...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCCTCAGGCAGCAGCCCTaGCCTCTTCTCCACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGLRQQP*PLLHMS Trigger: AGACATGTGGAGAAGAGGGCAGGGCTGCTGCCTGAG...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGATGTTTGGGTTGTGTGGGTCTCAACAGACCTTGGGCAGCCAAAGACCGTGATGCTCACCCCCTaGACCCTCTCCATGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QADVWVVWVSTDLGQPKTVMLTP*TLSMDL Trigger: CAAGTCCATGGAGAGGGTCCAGGGGGTGAGCATCAC...GGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCCCTCCTGTCTCCCACTaGTGGATGGCTGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCPPVSH*WMAVLL Trigger: GAGCAGCACAGCCATCCACCAGTGGGAGACAGGAGG...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | CCTGAGCTTCTTGAAGGCGAAGGCCACACCGTTCCTTaGACCCTGGTAGATATCGGCAAAGGTGCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PELLEGEGHTVP*TLVDIGKGALA Trigger: AGCGAGGGCACCTTTGCCGATATCTACCAGGGTCAAAGGAACGGTGTGGCCTTCGCCTTCAAGAAGCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| CDS-3UTR TCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTCCAGTCCCACTCACTaGGCGTGTCGATATTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCSSPTH*ACRYCG Trigger: GCCGCAATATCGACACGCTCAGTGAGTGGGACTGGA...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCAATGTCTGAGTTGCCCTaGGCCCAGAGTCTGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSVRCGELRGLGATAMSELP*AQSLSC Trigger: GCACGACAGACTCTGGGCTCAGGGCAACTCAGACAT...TGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCTGCTCCATGTCCCGTaGAGAGTGGAGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSLLHVP*RVERRQ Trigger: CTGCCTCCTCTCCACTCTTCACGGGACATGGAGCAG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCGTGATGCTCACCCCCTaGACCCTCTCCATGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCVMLTP*TLSMDL Trigger: CAAGTCCATGGAGAGGGTCCAGGGGGTGAGCATCAC...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCGGTAGGACGTTCGCGTaGCAGCATCTGAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSGRTFA*QHLRQS Trigger: GCTCTGCCTCAGATGCTGCCACGCGAACGTCCTACC...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCATGTCCCGTGAAGAGTaGAGAGGAGGCAGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPMSREE*RGGSPW Trigger: CCAGGGGCTGCCTCCTCTCCACTCTTCACGGGACAT...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCCTCCTGTCTCCCACTaGTGGATGGCTGTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSPPVSH*WMAVLL Trigger: GAGCAGCACAGCCATCCACCAGTGGGAGACAGGAGG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | AGGCTGATGTTTGGGTTGTGTGGGTCTCAACAGACCTaGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLMFGLCGSQQT*GSQRPLPCLDV Trigger: AACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | CGTGGCTTCACAGGCCGGACTTTCTCCTGTTCATCCTaGAGGTTTCTTCTAGAAGTAGCCACAGCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGFTGRTFSCSS*RFLLEVATAPG Trigger: GCCAGGGGCTGTGGCTACTTCTAGAAGAAACCTCAAGGATGAACAGGAGAAAGTCCGGCCTGTGAAGCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| CDS-3UTR TCA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCCCATGTAGGGGTAGATaGGGCTGTGGAACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGPCRGR*GCGTVF Trigger: GAAGACAGTTCCACAGCCTCATCTACCCCTACATGG...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGATGTTTGGGTTGTGTGGGTCTCAACAGACCTTGGGCAGCCAAAGACCCCAAAGAAGGGACGCTaGGGCTGGAATTGTCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: QADVWVVWVSTDLGQPKTPKKGR*GWNCQR Trigger: ACGTTGACAATTCCAGCCTCAGCGTCCCTTCTTTGG...GGTCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTCTGCTCCATGTCCCGTaGAGAGTGGAGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AALFFPRENRAGLSYKDTLLHVP*RVERRQ Trigger: CTGCCTCCTCTCCACTCTTCACGGGACATGGAGCAG...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGAGCTTGGGGTTAAGATaGTGGTCCAGCAAGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQSLGLR*WSSKTL Trigger: CAACGTCTTGCTGGACCAGCATCTTAACCCCAAGCT...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTCCGTGGCCTGCCGCATaGACCACCACCACAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVPWPAA*TTTTVA Trigger: AGCTACTGTGGTGGTGGTCCATGCGGCAGGCCACGG...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGAGAGGAGGCAGCCCCTaGGCACGATGCCATCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLFPAWTFVCPVENKGLQRGGSP*ARCHHN Trigger: GTTATGATGGCATCGTGCCCAGGGGCTGCCTCCTCT...CTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTTACAGGATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAATGTCCCGTGAAGAGTaGAGAGGAGGCAGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTGSPTEEGESLRSPLPMSREE*RGGSPW Trigger: CCAGGGGCTGCCTCCTCTCCACTCTTCACGGGACAT...TGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATCCTGTAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCCCTGTCTCCCACTGGTaGATGGCTGTGCTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPPVSHW*MAVLLH Trigger: ATGGAGCAGCACAGCCATCCACCAGTGGGAGACAGG...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCCTGTCTCCCACTGGTaGATGGCTGTGCTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSPVSHW*MAVLLH Trigger: ATGGAGCAGCACAGCCATCCACCAGTGGGAGACAGG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTGTCTCTGTAGCGTTCTaGGGTGTCTGTGGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPTEEGESLRSPLPTVLLVSVAF*GVCGPV Trigger: CACAGGCCCACAGACACCCCAGAACGCTACAGAGAC...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | GAAAACGCCACGGATGCTGCAGGATTGCTCTGTCCGTaGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ENATDAAGLLCP*WRTKRFGGNSI Trigger: GATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGTGGCGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCGGGGTATTGGAAGATaGGCCTGTGGCCTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLFPAWTFVCPVENKGLQRGIGR*ACGLRN Trigger: GTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCG...CTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCGGGGTATTGGAAGATaGGCCTGTGGCCTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSRGIGR*ACGLRN Trigger: GTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTAGCTTGGGGTTAAGATaGTGGTCCAGCAAGACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTDLGQPKTSSLPGRLSSLGLR*WSSKTL Trigger: CAACGTCTTGCTGGACCAGCATCTTAACCCCAAGCT...AGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCTGAAGATGTCCACCTaGTTGGTCAGCTGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSLKMST*LVSCPT Trigger: AGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTCCACTGCCTTCCCCATaGTGGTCTTCCTGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AALFFPRENRAGLSYKDTPLPSP*WSSWSR Trigger: TCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGG...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAAAGTAGCCACAGCCCCTaGCTTCACAGCCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHFQSASAAAAPILPRAESSHSP*LHSLWE Trigger: TTCCCAGAGGCTGTGAAGCCAGGGGCTGTGGCTACT...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059286.14 |
||
| CDS-3UTR CCA 90 bp | GTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCATCTCTTGGGGTGGTCCCATGCTGGTCTTCCTaGAGCAGACTGAAGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRCGELRGLGATASLGVVPCWSS*SRLKKY Trigger: GTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGG...GACCACCCCAAGAGATGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTTGGAAGATGAGCCTGTaGCCTCAGAAACCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKDLFPAWTFVCPVENKGWKMSL*PQKPCS Trigger: GGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCA...ACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | CTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTaGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQPKTSSLPGR*SVQLRIRVFSC Trigger: ACAGCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCGCTGTGTCAGGTCTGTaGTCACGTAGGAAGCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSAVSGL*SRRKRT Trigger: AGTTCGCTTCCTACGTGATCACAGACCTGACACAGC...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTCCATGTAGGGGTAGATaGGGCTGTGGAACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTEEGESLRSPLPTVLLPCRGR*GCGTVF Trigger: GAAGACAGTTCCACAGCCTCATCTACCCCTACATGG...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTCCAAAGAAGGGACGCTaGGGCTGGAATTGTCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTEEGESLRSPLPTVLLPKKGR*GWNCQR Trigger: ACGTTGACAATTCCAGCCTCAGCGTCCCTTCTTTGG...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCGGAACTGTCTTCCAGTaGAGAAACCCAGCAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCGTVFQ*RNPAEV Trigger: TACCTCTGCTGGGTTTCTGCACTGGAAGACAGTTCC...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTCTCAGGCAGCAGCCCTaGCCTCTTCTCCACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVLRQQP*PLLHMS Trigger: AGACATGTGGAGAAGAGGGCAGGGCTGCTGCCTGAG...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAGCCCCTGGGCACGATaGCATCATAACCAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPSPWAR*HHNQRR Trigger: CCTTCTTTGGTTATGATGGCATCGTGCCCAGGGGCT...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTGTAGGAATCTGTCCATaGACCCTGGACTGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVVGICP*TLDWSR Trigger: CCGGCTCCAGTCCAGGGTCCATGGACAGATTCCTAC...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTTGGAAGATGAGCCTGTaGCCTCAGAAACCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AALFFPRENRAGLSYKDTWKMSL*PQKPCS Trigger: GGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCA...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCATACAATTCCACAGCTaGAGATGTCCACCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCIQFHS*RCPPAW Trigger: CCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTAT...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTGATCTCTTTCACCACTaGCTTCCCCATGCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTEEGESLRSPLPTVLLDLFHH*LPHAGL Trigger: AAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGATC...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCCTGATTCGGTGGCTTTaGTCAAAGTCCTCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCLIRWL*SKSSVA Trigger: AGCAACTGAGGACTTTGACCAAAGCCACCGAATCAG...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | GTGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTaGGATCACATACAAGGTGTTCCACTTCACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSPEPQKPPKS*DHIQGVPLHSP Trigger: AGGGCTGTGAAGTGGAACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | TCCTTTGCCAACCGTCCTGCTTTTGCAGTCCTGAACTaGAGAACTTGCGGAGACACCGGCTGTAGGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFANRPAFAVLN*RTCGDTGCRSF Trigger: AAAAGACCTACAGCCGGTGTCTCCGCAAGTTCTCAAGTTCAGGACTGCAAAAGCAGGACGGTTGGCAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | AGCCTGTCTCCGGGCAAACCCAAAAGCCTTTCTTGCTaGGGGGCAGATGTGGAAGTACTGCAATACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSPGKPKSLSC*GADVEVLQYLD Trigger: GTCTAAGTATTGCAGTACTTCCACATCTGCCCCCAAGCAAGAAAGGCTTTTGGGTTTGCCCGGAGACAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| CDS-3UTR TCA 90 bp | TCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTATACAATTCCACAGCTaGAGATGTCCACCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTEEGESLRSPLPTVLLIQFHS*RCPPAW Trigger: CCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTAT...AAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGTCAACAACGTGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGGATCTCAATTTTCCATaGAGTCTCTGTAGCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWSTTWVPRNHKNHPNPWDLNFP*SLCSVL Trigger: CAGAACGCTACAGAGACTTCATGGAAAATTGAGATC...CCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCACGTTGTTGACCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATATCTGTCCATGGACCCTaGACTGGAGCCGGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQSHELHTFYSIENTEQISVHGP*TGAGHL Trigger: GAGGTGGCCGGCTCCAGTCCAGGGTCCATGGACAGA...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| 3UTR CAA 72 bp | AAGCCATGTTTCCTTCTGTTCAGGCTGATGTTTGGGTaGTGTGGGTCTCAACAGACCTTGGGCAGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPCFLLFRLMFG*CGSQQTLGSQR Trigger: TCTTTGGCTGCCCAAGGTCTGTTGAGACCCACACAACCCAAACATCAGCCTGAACAGAAGGAAACATGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCAACAGCAGATCTCAATTTTCCATaGAGTCTCTGTAGCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSVRCGELRGLGATADLNFP*SLCSVL Trigger: CAGAACGCTACAGAGACTTCATGGAAAATTGAGATC...TGCTGTTGCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAAAAAGCCTTTCTTGCTTaGGGGCAGATGTGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IHFQSASAAAAPILPRAEKAFLA*GQMWKY Trigger: GTACTTCCACATCTGCCCCCAAGCAAGAAAGGCTTT...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAACTGATTCGGTGGCTTTaGTCAAAGTCCTCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHFQSASAAAAPILPRAELIRWL*SKSSVA Trigger: AGCAACTGAGGACTTTGACCAAAGCCACCGAATCAG...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCTCTTAACATTGCTGTaGATGATGTCCAGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: DLFPAWTFVCPVENKGLQLLTLL*MMSRLC Trigger: GCATAGCCTGGACATCATCCACAGCAATGTTAAGAG...CTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTCCATGCTGGTCTTCCTaGAGCAGACTGAAGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVPCWSS*SRLKKY Trigger: GTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGG...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTCCATTGAGAACACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGGGTGGATGGCTGTGCTaGTCCATGTCCCGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTPLRTQNRYIFKVLLQPGGWLC*SMSREE Trigger: CTCTTCACGGGACATGGAGCAGCACAGCCATCCACC...CGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTGTTCTCAATGGAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAGGTGGATGGCTGTGCTaGTCCATGTCCCGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQSHELHTFYSIENTEQIGGWLC*SMSREE Trigger: CTCTTCACGGGACATGGAGCAGCACAGCCATCCACC...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACGGTAGGACGTTCGCGTaGCAGCATCTGAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDGRTFA*QHLRQS Trigger: GCTCTGCCTCAGATGCTGCCACGCGAACGTCCTACC...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTCTCTTAACATTGCTGTaGATGATGTCCAGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: AALFFPRENRAGLSYKDTLLTLL*MMSRLC Trigger: GCATAGCCTGGACATCATCCACAGCAATGTTAAGAG...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | TTTACTCCATTGAGAACACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGAGAGGAGGCAGCCCCTaGGCACGATGCCATCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTPLRTQNRYIFKVLLQPRGGSP*ARCHHN Trigger: GTTATGATGGCATCGTGCCCAGGGGCTGCCTCCTCT...CGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTGTTCTCAATGGAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTCCATTGAGAACACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGAAGATGTCCACCTaGTTGGTCAGCTGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTPLRTQNRYIFKVLLQPLKMST*LVSCPT Trigger: AGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAG...CGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTGTTCTCAATGGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACCTGCCTTCCCCATGCTaGTCTTCCTGGAGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDLPSPC*SSWSRL Trigger: CAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAG...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACGTCTCTGTAGCGTTCTaGGGTGTCTGTGGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDVSVAF*GVCGPV Trigger: CACAGGCCCACAGACACCCCAGAACGCTACAGAGAC...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAGCTGTGTCAGGTCTGTaGTCACGTAGGAAGCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WQSHELHTFYSIENTEQIAVSGL*SRRKRT Trigger: AGTTCGCTTCCTACGTGATCACAGACCTGACACAGC...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTTTTGCAGTCCTGAACTTTCCTTTTGGCTTCATTaGTCTCAATTTTCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKAYGVLCQPSCFCSPELSFWLH*SQFSMK Trigger: CTTCATGGAAAATTGAGATCAATGAAGCCAAAAGGA...AAGTTCAGGACTGCAAAAGCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACAGCCCCTGGGCACGATaGCATCATAACCAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDSPWAR*HHNQRR Trigger: CCTTCTTTGGTTATGATGGCATCGTGCCCAGGGGCT...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | TTTACTCCATTGAGAACACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGGTCAAAGTCCTCAGTTaGTTGGACGACATCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTPLRTQNRYIFKVLLQPVKVLS*LDDICF Trigger: GAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGAC...CGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTGTTCTCAATGGAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACGATCTCTTTCACCACTaGCTTCCCCATGCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDDLFHH*LPHAGL Trigger: AAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGATC...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACGTCAAAGTCCTCAGTTaGTTGGACGACATCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDVKVLS*LDDICF Trigger: GAAGCAGATGTCGTCCAAGCAACTGAGGACTTTGAC...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGGTCTTTTAAGAAGTGGGAATTTGCAGAAAGCTGTCTACAAATATGACAAAGCCTTTCTTGCTTaGGGGCAGATGTGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLRSGNLQKAVYKYDKAFLA*GQMWKY Trigger: GTACTTCCACATCTGCCCCCAAGCAAGAAAGGCTTT...GTCATATTTGTAGACAGCTTTCTGCAAATTCCCACTTCTTAAAAGACCTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 90 bp | CCTCCACCCCGGCCAGGGAGACTCGTGCCTCCTCCACGCTGGCATTaGGCCTCCGCAGGCAGACACTCACAGCGGTGGCCCAGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPRPGRLVPPPRWH*ASAGRHSQRWPRLP Trigger: AGGAAGCCTGGGCCACCGCTGTGAGTGTCTGCCTGCGGAGGCGCAATGCCAGCGTGGAGGAGGCACGAGTCTCCCTGGCCGGGGTGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 90 bp | AGGGAAGGGACAGCTGCCCTCGGAGTTGCTCCTCCACGCTGGCATTaGGCCTCCGCAGGCAGACACTCACAGCGGTGGCCCAGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: REGTAALGVAPPRWH*ASAGRHSQRWPRLP Trigger: AGGAAGCCTGGGCCACCGCTGTGAGTGTCTGCCTGCGGAGGCGCAATGCCAGCGTGGAGGAGCAACTCCGAGGGCAGCTGTCCCTTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | GGCTATGCAGGTGCTCCACGGCTAGAAGCAGCCCTGAGCAGATGCTaGCCCGCTGTGGCCAGGGCAGCATGTCTGAGTTGCCCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GYAGAPRLEAALSRC*PAVARAACLSCPEP Trigger: GGGCTCAGGGCAACTCAGACATGCTGCCCTGGCCACAGCGGGCCAGCATCTGCTCAGGGCTGCTTCTAGCCGTGGAGCACCTGCATAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 90 bp | CCAGGCTATGCAGGTGCTCCACGGCTAGAAGCAGCCCTGAGCAGATaGTGGCCCGCTGTGGCCAGGGCAGCATGTCTGAGTTGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGYAGAPRLEAALSR*WPAVARAACLSCPE Trigger: CTCAGGGCAACTCAGACATGCTGCCCTGGCCACAGCGGGCCAGCATCTGCTCAGGGCTGCTTCTAGCCGTGGAGCACCTGCATAGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS TCA 90 bp | AAGGGGCATCCATCTCGCACGGACGCTGCCGCTGGGCCCCAGCCATaGTGGGCCAGCTCAAGACAATCTGGGCAGCTCGGTAGAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGHPSRTDAAAGPQP*WASSRQSGQLGRVP Trigger: TGGAACTCTACCGAGCTGCCCAGATTGTCTTGAGCTGGCCCATCATGGCTGGGGCCCAGCGGCAGCGTCCGTGCGAGATGGATGCCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089022.9 |
||
| CDS TCA 90 bp | AGTCTCTGTAGCGTTCTGGGGTGTCTGTGGGCCTGTGCAAGCCTCTaGCGAGGAGTCAGCCTCCTGTCTCCCACTGGTGGATGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCSVLGCLWACASL*RGVSLLSPTGGWLC Trigger: GCACAGCCATCCACCAGTGGGAGACAGGAGGCTGACTCCTCGTCAGAGGCTTGCACAGGCCCACAGACACCCCAGAACGCTACAGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 90 bp | CCCAGCAGAGGTAGGACGTTCGCGTGGCAGCATCTGAGGCAGAGCTaGATCTCTGCCTGTAGGAATCTGTCCATGGACCCTGGACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRGRTFAWQHLRQS*ISACRNLSMDPGLE Trigger: CTCCAGTCCAGGGTCCATGGACAGATTCCTACAGGCAGAGATGCAGCTCTGCCTCAGATGCTGCCACGCGAACGTCCTACCTCTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 90 bp | AAGGCTGGGAGGGGAGATGTGCTCTCAGGAACCGGCTTCCCGAACTaGATCCAGTCCCACTCACTGAGCGTGTCGATATTGCGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAGRGDVLSGTGFPN*IQSHSLSVSILRHR Trigger: CCTGTGCCGCAATATCGACACGCTCAGTGAGTGGGACTGGATGCAGTTCGGGAAGCCGGTTCCTGAGAGCACATCTCCCCTCCCAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | GAGGTTTCTTCTAGAAGTAGCCACAGCCCCTGGCTTCACAGCCTCTaGGAAGGCTGGGAGGGGAGATGTGCTCTCAGGAACCGGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSSRSSHSPWLHSL*EGWEGRCALRNRLP Trigger: GGGAAGCCGGTTCCTGAGAGCACATCTCCCCTCCCAGCCTTCCCAGAGGCTGTGAAGCCAGGGGCTGTGGCTACTTCTAGAAGAAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | GCCATGATGGGCCCTGTGTCTAGAAGGGAACGTGGCTTCACAGGCCGGACTTTCCTGAGCGTGTCGATATaGCGGCACAGGTCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AMMGPVSRRERGFTGRTFLSVSI*RHRSSS Trigger: GCTGGACGACCTGTGCCGCAATATCGACACGCTCAG...GAAAGTCCGGCCTGTGAAGCCACGTTCCCTTCTAGACACAGGGCCCATCATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204744.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCCAGCTGCCCTCGGAGTaGCTCCTCCACCCCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRTDTFSKCFCSRCTHPPQLPSE*LLHPGQ Trigger: CTGGCCGGGGTGGAGGAGCAACTCCGAGGGCAGCTG...GGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGCCAGCTGCCCTCGGAGTaGCTCCTCCACCCCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSLPGRLSVQLRIRVFSQLPSE*LLHPGQ Trigger: CTGGCCGGGGTGGAGGAGCAACTCCGAGGGCAGCTG...GCTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS CCA 90 bp | GAGGTTTCTTCTAGAAGTAGCCACAGCCCCTGGCTTCACAGCCTCTaGGAAGGCTGGGAGGGGAGATGTGCTCTCAGGAACCGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVSSRSSHSPWLHSL*EGWEGRCALRNRLP Trigger: TGGAAGCCGGTTCCTGAGAGCACATCTCCCCTCCCAGCCTTCCCAGAGGCTGTGAAGCCAGGGGCTGTGGCTACTTCTAGAAGAAACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059286.14 |
||
| CDS CCA 90 bp | TCTCCCACTGGTGGATGGCTGTGCTGCTCCATGTCCCGTGAAGAGTaGAGAGGAGGCAGCCCCTGGGCACGATGCCATCATAACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPTGGWLCCSMSREE*RGGSPWARCHHNQR Trigger: TCTTTGGTTATGATGGCATCGTGCCCAGGGGCTGCCTCCTCTCCACTCTTCACGGGACATGGAGCAGCACAGCCATCCACCAGTGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | TGTCAACGTCATCTGTTTCCTCCGGGGTATTGGAAGATGAGCCTGTaGCCTCAGAAACCCTGCTCCAGGGAAGGGACAGCTGCCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CQRHLFPPGYWKMSL*PQKPCSREGTAALG Trigger: TCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | GGGTGGTCAACAACGTGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGCTGAGCGTGTCGATATaGCGGCACAGGTCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWSTTWVPRNHKNHPNPWLSVSI*RHRSSS Trigger: GCTGGACGACCTGTGCCGCAATATCGACACGCTCAG...CCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCACGTTGTTGACCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGTCAACAACGTGGGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGGTTTCCTCCGGGGTATaGGAAGATGAGCCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSTTWVPRNHKNHPNPWVSSGV*EDEPVA Trigger: GGCCACAGGCTCATCTTCCAATACCCCGGAGGAAAC...CCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACCCACGTTGTTGACCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS TCA 90 bp | GCTGGAATTGTCAACGTCATCTGTTTCCTCCGGGGTATTGGAAGATaGGCCTGTGGCCTCAGAAACCCTGCTCCAGGGAAGGGACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGIVNVICFLRGIGR*ACGLRNPAPGKGQL Trigger: CAGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS GCA 90 bp | AAGACGTTGGCACTCTTAACATTGCTGTGGATGATGTCCAGGCTATaGAGGTGCTCCACGGCTAGAAGCAGCCCTGAGCAGATGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTLALLTLLWMMSRL*RCSTARSSPEQMLA Trigger: GGCCAGCATCTGCTCAGGGCTGCTTCTAGCCGTGGAGCACCTGCATAGCCTGGACATCATCCACAGCAATGTTAAGAGTGCCAACGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 90 bp | AACTGTCTTCCAGTGCAGAAACCCAGCAGAGGTAGGACGTTCGCGTaGCAGCATCTGAGGCAGAGCTGCATCTCTGCCTGTAGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NCLPVQKPSRGRTFA*QHLRQSCISACRNL Trigger: CAGATTCCTACAGGCAGAGATGCAGCTCTGCCTCAGATGCTGCCACGCGAACGTCCTACCTCTGCTGGGTTTCTGCACTGGAAGACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS TCA 90 bp | CCCAGAGTCTGTCGTGCAGAGAGCCATTTGCCATGTAGGGGTAGATaGGGCTGTGGAACTGTCTTCCAGTGCAGAAACCCAGCAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRVCRAESHLPCRGR*GCGTVFQCRNPAEV Trigger: TACCTCTGCTGGGTTTCTGCACTGGAAGACAGTTCCACAGCCTCATCTACCCCTACATGGCAAATGGCTCTCTGCACGACAGACTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS GCA 90 bp | GCCAATACAATTCCACAGCTGAAGATGTCCACCTGCTTGGTCAGCTaGCCCACTCTGATGAAGTGTTCCGGCAGATATGCAGCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANTIPQLKMSTCLVS*PTLMKCSGRYAAEA Trigger: GGCCTCAGCTGCATATCTGCCGGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCACCCAAAAGCCTTTCTaGCTTGGGGGCAGATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGTQKPF*LGGRCG Trigger: TCCACATCTGCCCCCAAGCAAGAAAGGCTTTTGGGT...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGCTGATTCGGTGGCTTaGGTCAAAGTCCTCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSTDLGQPKTSSLPGRLSADSVA*VKVLSC Trigger: GCAACTGAGGACTTTGACCAAAGCCACCGAATCAGC...AGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | ACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTGGTCCAGCAAGACGTaGGCACTCTTAACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TDLGQPKTSSLPGRLSVQWSSKT*ALLTLL Trigger: CAGCAATGTTAAGAGTGCCAACGTCTTGCTGGACCA...CTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTAAGATGTCCACCTGCTaGGTCAGCTGCCCCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKDLFPAWTFVCPVENKGKMSTC*VSCPTL Trigger: CAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTT...ACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS TCA 90 bp | GGTCAGCTGCCCCACTCTGATGAAGTGTTCCGGCAGATATGCAGCTaGGGCCTGGAACAGGTGAGTCCTCATGACGGTATATTTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQLPHSDEVFRQICS*GLEQVSPHDGIFGL Trigger: AAGACCAAATATACCGTCATGAGGACTCACCTGTTCCAGGCCTCAGCTGCATATCTGCCGGAACACTTCATCAGAGTGGGGCAGCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | GGTTCCCCGGAACCACAAAAACCACCCAAATCCTTGGATCACATACAAGGTGTTCTGAGCGTGTCGATATaGCGGCACAGGTCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPEPQKPPKSLDHIQGVLSVSI*RHRSSS Trigger: GCTGGACGACCTGTGCCGCAATATCGACACGCTCAG...AACACCTTGTATGTGATCCAAGGATTTGGGTGGTTTTTGTGGTTCCGGGGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 90 bp | GTAAGGACCTCGGCCAATACAATTCCACAGCTGAAGATGTCCACCTaGTTGGTCAGCTGCCCCACTCTGATGAAGTGTTCCGGCAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: VRTSANTIPQLKMST*LVSCPTLMKCSGRY Trigger: ATATCTGCCGGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTATTGGCCGAGGTCCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | TTAAGATGCTGGTCCAGCAAGACGTTGGCACTCTTAACATTGCTGTaGATGATGTCCAGGCTATGCAGGTGCTCCACGGCTAGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRCWSSKTLALLTLL*MMSRLCRCSTARSS Trigger: GCTGCTTCTAGCCGTGGAGCACCTGCATAGCCTGGACATCATCCACAGCAATGTTAAGAGTGCCAACGTCTTGCTGGACCAGCATCTTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | AGTACTGTTGGGAATCTCACTGAGAAGCAAATCCTTCAGGTAAACTaGACTGCGGTCCTTGTCCATCGCAGGGATGCCGGTAAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: STVGNLTEKQILQVN*TAVLVHRRDAGKDL Trigger: GAGGTCCTTACCGGCATCCCTGCGATGGACAAGGACCGCAGTCCAGTTTACCTGAAGGATTTGCTTCTCAGTGAGATTCCCAACAGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | CCACATGTCTCTGGCAGATCTCTTTCACCACTGCCTTCCCCATGCTaGTCTTCCTGGAGCAGACTGAAGAAGTACTGTTGGGAATCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PHVSGRSLSPLPSPC*SSWSRLKKYCWESH Trigger: GTGAGATTCCCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGATCTGCCAGAGACATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 90 bp | TTGGCTTCATTGATCTCAATTTTCCATGAAGTCTCTGTAGCGTTCTaGGGTGTCTGTGGGCCTGTGCAAGCCTCTGACGAGGAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LASLISIFHEVSVAF*GVCGPVQASDEESA Trigger: GGCTGACTCCTCGTCAGAGGCTTGCACAGGCCCACAGACACCCCAGAACGCTACAGAGACTTCATGGAAAATTGAGATCAATGAAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS TCA 90 bp | GTTCCGGCAGATATGCAGCTGAGGCCTGGAACAGGTGAGTCCTCATaGCGGTATATTTGGTCTTTTTATTGTCGGGATGAGGGTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPADMQLRPGTGESS*RYIWSFYCRDEGEP Trigger: TGGCTCACCCTCATCCCGACAATAAAAAGACCAAATATACCGTCATGAGGACTCACCTGTTCCAGGCCTCAGCTGCATATCTGCCGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 90 bp | TCTCCACATGTCTCTGGCAGATCTCTTTCACCACTGCCTTCCCCATaGTGGTCTTCCTGGAGCAGACTGAAGAAGTACTGTTGGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPHVSGRSLSPLPSP*WSSWSRLKKYCWES Trigger: AGATTCCCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGATCTGCCAGAGACATGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACAGGATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAGCTGATTCGGTGGCTTaGGTCAAAGTCCTCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLTGSPTEEGESLRSPLPADSVA*VKVLSC Trigger: GCAACTGAGGACTTTGACCAAAGCCACCGAATCAGC...TGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATCCTGTAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS TCA 90 bp | CTCTTTCACCACTGCCTTCCCCATGCTGGTCTTCCTGGAGCAGACTaGAGAAGTACTGTTGGGAATCTCACTGAGAAGCAAATCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFHHCLPHAGLPGAD*RSTVGNLTEKQILQ Trigger: CTGAAGGATTTGCTTCTCAGTGAGATTCCCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGGTGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | ATACATTTTCAAAGTGCTTCTGCAGCCGCTGCACCCATCCTCCCAAGAGCTGAATGGTCCAGCAAGACGTaGGCACTCTTAACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHFQSASAAAAPILPRAEWSSKT*ALLTLL Trigger: CAGCAATGTTAAGAGTGCCAACGTCTTGCTGGACCA...TTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAAGCACTTTGAAAATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS TCA 90 bp | TGGTCTTCCTGGAGCAGACTGAAGAAGTACTGTTGGGAATCTCACTaGGAAGCAAATCCTTCAGGTAAACTGGACTGCGGTCCTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSSWSRLKKYCWESH*EANPSGKLDCGPCP Trigger: TGGACAAGGACCGCAGTCCAGTTTACCTGAAGGATTTGCTTCTCAGTGAGATTCCCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS-3UTR CAA 90 bp | GACCTCTTCCCTGCCTGGACGTTTGTCTGTCCAGTTGAGAATAAGGGTCTTCAGACTGAAGAAGTACTGTaGGGAATCTCACTGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLFPAWTFVCPVENKGLQTEEVL*GISLRS Trigger: GCTTCTCAGTGAGATTCCCAACAGTACTTCTTCAGT...CTGAAGACCCTTATTCTCAACTGGACAGACAAACGTCCAGGCAGGGAAGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCAACAGACCTTGGGCAGCCAAAGACCTCTTCCCTGCCTGGACGTTTGTCTTCCATCAGTCTCCTTTaGGCTTCATTGATCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: VSTDLGQPKTSSLPGRLSSISLL*ASLISI Trigger: AATTGAGATCAATGAAGCCAAAAGGAGACTGATGGA...AGACAAACGTCCAGGCAGGGAAGAGGTCTTTGGCTGCCCAAGGTCTGTTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | TTTACTCCATTGAGAACACAGAACAGATACATTTTCAAAGTGCTTCTGCAGCCGAAGATGTCCACCTGCTaGGTCAGCTGCCCCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTPLRTQNRYIFKVLLQPKMSTC*VSCPTL Trigger: CAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTT...CGGCTGCAGAAGCACTTTGAAAATGTATCTGTTCTGTGTTCTCAATGGAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAGTTTCCTCCGGGGTATaGGAAGATGAGCCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WQSHELHTFYSIENTEQIVSSGV*EDEPVA Trigger: GGCCACAGGCTCATCTTCCAATACCCCGGAGGAAAC...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | ACGGATGCTGCAGGATTGCTCTGTCCGTTGTGGAGAACTAAGAGGTTTGGGGGCCTCCTTTTGGCTTCATaGATCTCAATTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TDAAGLLCPLWRTKRFGGLLLAS*ISIFHE Trigger: TTCATGGAAAATTGAGATCAATGAAGCCAAAAGGAG...GCCCCCAAACCTCTTAGTTCTCCACAACGGACAGAGCAATCCTGCAGCATCCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GATCACCAACTGAAGAAGGAGAAAGCCTACGGAGTCCTTTGCCAACCGTCCTGCTCCATCAGTCTCCTTTaGGCTTCATTGATCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: DHQLKKEKAYGVLCQPSCSISLL*ASLISI Trigger: AATTGAGATCAATGAAGCCAAAAGGAGACTGATGGA...GCAGGACGGTTGGCAAAGGACTCCGTAGGCTTTCTCCTTCTTCAGTTGGTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAACCCAAAAGCCTTTCTaGCTTGGGGGCAGATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WQSHELHTFYSIENTEQITQKPF*LGGRCG Trigger: TCCACATCTGCCCCCAAGCAAGAAAGGCTTTTGGGT...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCTGTTCTTCCCCAGGGAGAACAGAGCAGGGTTATCTTACAAGGATACTCTCCTTTTGGCTTCATaGATCTCAATTTTCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: AALFFPRENRAGLSYKDTLLLAS*ISIFHE Trigger: TTCATGGAAAATTGAGATCAATGAAGCCAAAAGGAG...AGTATCCTTGTAAGATAACCCTGCTCTGTTCTCCCTGGGGAAGAACAGAGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAGCCATGAACTACATACCTTTTACTCCATTGAGAACACAGAACAGATAACTGAAGAAGTACTGTaGGGAATCTCACTGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WQSHELHTFYSIENTEQITEEVL*GISLRS Trigger: GCTTCTCAGTGAGATTCCCAACAGTACTTCTTCAGT...TATCTGTTCTGTGTTCTCAATGGAGTAAAAGGTATGTAGTTCATGGCTCTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS CAA 90 bp | TCCTCCACCCCGGCCAGGGAGACTCGTGCCTCCTCCACGCTGGCATaGCGCCTCCGCAGGCAGACACTCACAGCGGTGGCCCAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTPARETRASSTLA*RLRRQTLTAVAQAS Trigger: GGAAGCCTGGGCCACCGCTGTGAGTGTCTGCCTGCGGAGGCGCAATGCCAGCGTGGAGGAGGCACGAGTCTCCCTGGCCGGGGTGGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 72 bp | ACCCTGCTCCAGGGAAGGGACAGCTGCCCTCGGAGTTaGTCCTCCACCCCGGCCAGGGAGACTCGTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLLQGRDSCPRS*SSTPARETRAS Trigger: GGAGGCACGAGTCTCCCTGGCCGGGGTGGAGGAGCAACTCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 72 bp | GTGGCCTCAGAAACCCTGCTCCAGGGAAGGGACAGCTaGCCTCGGAGTTGCTCCTCCACCCCGGCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VASETLLQGRDS*PRSCSSTPARE Trigger: CTCCCTGGCCGGGGTGGAGGAGCAACTCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
||
| CDS GCA 72 bp | ACAGCTGCCCTCGGAGTTGCTCCTCCACGCTGGCATTaGGCCTCCGCAGGCAGACACTCACAGCGGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAALGVAPPRWH*ASAGRHSQRWP Trigger: GGGCCACCGCTGTGAGTGTCTGCCTGCGGAGGCGCAATGCCAGCGTGGAGGAGCAACTCCGAGGGCAGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS GCA 72 bp | ACCCTGCTCCAGGGAAGGGACAGCTGCCCTCGGAGTTaGTCCTCCACGCTGGCATTGCGCCTCCGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLQGRDSCPRS*SSTLALRLRRQ Trigger: CTGCCTGCGGAGGCGCAATGCCAGCGTGGAGGAGCAACTCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS CCA 72 bp | TGGCATTGCGCCTCCGCAGGCAGACACTCACAGCGGTaGCCCAGGCTTCCTCACAGGCCTCAGGCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WHCASAGRHSQR*PRLPHRPQAAA Trigger: GGCTGCTGCCTGAGGCCTGTGAGGAAGCCTGGGCCACCGCTGTGAGTGTCTGCCTGCGGAGGCGCAATGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 72 bp | CCAGGTGACACAGGAGGTCCACCAGCTGCTGGACCGTaGCCTGCCGCATGGACCACCACCACAGTAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGDTGGPPAAGP*PAAWTTTTVAP Trigger: GGGAGCTACTGTGGTGGTGGTCCATGCGGCAGGCCACGGTCCAGCAGCTGGTGGACCTCCTGTGTCACCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| CDS GCA 72 bp | GTGGCCTCAGAAACCCTGCTCCAGGGAAGGGACAGCTaGCCTCGGAGTTGCTCCTCCACGCTGGCATTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VASETLLQGRDS*PRSCSSTLALR Trigger: GCGCAATGCCAGCGTGGAGGAGCAACTCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
||
| CDS GCA 72 bp | TTCAGGGAACAAGGGGCATCCATCTCGCACGGACGCTaGCGCTGGGCCCCAGCCATGATGGGCCAGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FREQGASISHGR*RWAPAMMGQLK Trigger: CTTGAGCTGGCCCATCATGGCTGGGGCCCAGCGGCAGCGTCCGTGCGAGATGGATGCCCCTTGTTCCCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089022.9 |
||
| CDS TCA 72 bp | GCCCGCTGTGGCCAGGGCAGCATGTCTGAGTTGCCCTaGGCCCAGAGTCTGTCGTGCAGAGAGCCATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARCGQGSMSELP*AQSLSCREPFA Trigger: GGCAAATGGCTCTCTGCACGACAGACTCTGGGCTCAGGGCAACTCAGACATGCTGCCCTGGCCACAGCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS GCA 72 bp | GGAGTCAGCCTCCTGTCTCCCACTGGTGGATGGCTGTaGTGCTCCATGTCCCGTGAAGAGTGGAGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GVSLLSPTGGWL*CSMSREEWRGG Trigger: GCCTCCTCTCCACTCTTCACGGGACATGGAGCAGCACAGCCATCCACCAGTGGGAGACAGGAGGCTGACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 72 bp | GGTGGATGGCTGTGCTGCTCCATGTCCCGTGAAGAGTaGAGAGGAGGCAGCCCCTGGGCACGATGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGWLCCSMSREE*RGGSPWARCHH Trigger: ATGATGGCATCGTGCCCAGGGGCTGCCTCCTCTCCACTCTTCACGGGACATGGAGCAGCACAGCCATCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 72 bp | AACTGCATCCAGTCCCACTCACTGAGCGTGTCGATATaGCGGCACAGGTCGTCCAGCACCCAGGACGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NCIQSHSLSVSI*RHRSSSTQDGS Trigger: GCTGCCGTCCTGGGTGCTGGACGACCTGTGCCGCAATATCGACACGCTCAGTGAGTGGGACTGGATGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 ENSMUST00000204744.3 |
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| CDS GCA 72 bp | GGGTATTGGAAGATGAGCCTGTGGCCTCAGAAACCCTaGTCCAGGGAAGGGACAGCTGCCCTCGGAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GYWKMSLWPQKP*SREGTAALGVA Trigger: AGCAACTCCGAGGGCAGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS GCA 72 bp | GGTAGGACGTTCGCGTGGCAGCATCTGAGGCAGAGCTaGATCTCTGCCTGTAGGAATCTGTCCATGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRTFAWQHLRQS*ISACRNLSMDP Trigger: AGGGTCCATGGACAGATTCCTACAGGCAGAGATGCAGCTCTGCCTCAGATGCTGCCACGCGAACGTCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 72 bp | TCAGGCAGCAGCCCTGCCCTCTTCTCCACATGTCTCTaGCAGATCTCTTTCACCACTGCCTTCCCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSSPALFSTCL*QISFTTAFPML Trigger: CAGCATGGGGAAGGCAGTGGTGAAAGAGATCTGCCAGAGACATGTGGAGAAGAGGGCAGGGCTGCTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 72 bp | CGGGTGATGCTCACCCCCTGGACCCTCTCCATGGACTaGATCTTCCTCAGCTGTGTCAGGTCTGTGATCACG | + |
|
Preference number: 6 (lower is better) Translates to: RVMLTPWTLSMD*IFLSCVRSVIT Trigger: CGTGATCACAGACCTGACACAGCTGAGGAAGATCAAGTCCATGGAGAGGGTCCAGGGGGTGAGCATCACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 |
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| CDS TCA 72 bp | TCACGTAGGAAGCGAACTGCATCCAGTCCCACTCACTaGGCGTGTCGATATTGCGGCACAGGTCGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRKRTASSPTH*ACRYCGTGRPA Trigger: TGCTGGACGACCTGTGCCGCAATATCGACACGCTCAGTGAGTGGGACTGGATGCAGTTCGCTTCCTACGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000204744.3 |
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| CDS GCA 72 bp | GCCCTGAGCCCAGAGTCTGTCGTGCAGAGAGCCATTTaGCATGTAGGGGTAGATGAGGCTGTGGAACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALSPESVVQRAI*HVGVDEAVELS Trigger: AGACAGTTCCACAGCCTCATCTACCCCTACATGGCAAATGGCTCTCTGCACGACAGACTCTGGGCTCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS GCA 72 bp | AGGGGAGATGTGCTCTCAGGAACCGGCTTCCCGAACTaGATCCAGTCCCACTCACTGAGCGTGTCGATATTG | + |
|
Preference number: 6 (lower is better) Translates to: RGDVLSGTGFPN*IQSHSLSVSIL Trigger: CAATATCGACACGCTCAGTGAGTGGGACTGGATGCAGTTCGGGAAGCCGGTTCCTGAGAGCACATCTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089023.11 |
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| CDS CCA 72 bp | CATCTGTTTCCTCCGGGGTATTGGAAGATGAGCCTGTaGCCTCAGAAACCCTGCTCCAGGGAAGGGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLFPPGYWKMSL*PQKPCSREGTA Trigger: AGCTGTCCCTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 90 bp | ACGCTGAGGCTGGAATTGTCAACGTCATCTGTTTCCTCCGGGGTATaGGAAGATGAGCCTGTGGCCTCAGAAACCCTGCTCCAGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLRLELSTSSVSSGV*EDEPVASETLLQGR Trigger: CCTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCAGCCTCAGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS TCA 72 bp | GTCAACGTCATCTGTTTCCTCCGGGGTATTGGAAGATaGGCCTGTGGCCTCAGAAACCCTGCTCCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VNVICFLRGIGR*ACGLRNPAPGK Trigger: CTTCCCTGGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS TCA 72 bp | CCCCACTCTGATGAAGTGTTCCGGCAGATATGCAGCTaGGGCCTGGAACAGGTGAGTCCTCATGACGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: PHSDEVFRQICS*GLEQVSPHDGI Trigger: TATACCGTCATGAGGACTCACCTGTTCCAGGCCTCAGCTGCATATCTGCCGGAACACTTCATCAGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 72 bp | TGGTCCAGCAAGACGTTGGCACTCTTAACATTGCTGTaGATGATGTCCAGGCTATGCAGGTGCTCCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSSKTLALLTLL*MMSRLCRCSTA Trigger: AGCCGTGGAGCACCTGCATAGCCTGGACATCATCCACAGCAATGTTAAGAGTGCCAACGTCTTGCTGGACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 72 bp | GGGAATCTCACTGAGAAGCAAATCCTTCAGGTAAACTaGACTGCGGTCCTTGTCCATCGCAGGGATGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GNLTEKQILQVN*TAVLVHRRDAG Trigger: ACCGGCATCCCTGCGATGGACAAGGACCGCAGTCCAGTTTACCTGAAGGATTTGCTTCTCAGTGAGATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 72 bp | GCCAATACAATTCCACAGCTGAAGATGTCCACCTGCTaGGTCAGCTGCCCCACTCTGATGAAGTGTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ANTIPQLKMSTC*VSCPTLMKCSG Trigger: GCCGGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTATTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 90 bp | AGGACCTCGGCCAATACAATTCCACAGCTGAAGATGTCCACCTGCTaGGTCAGCTGCCCCACTCTGATGAAGTGTTCCGGCAGATATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTSANTIPQLKMSTC*VSCPTLMKCSGRYA Trigger: TGCATATCTGCCGGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTATTGGCCGAGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS TCA 72 bp | TGTCGTGCAGAGAGCCATTTGCCATGTAGGGGTAGATaGGGCTGTGGAACTGTCTTCCAGTGCAGAAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: CRAESHLPCRGR*GCGTVFQCRNP Trigger: TGGGTTTCTGCACTGGAAGACAGTTCCACAGCCTCATCTACCCCTACATGGCAAATGGCTCTCTGCACGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 72 bp | ATTCCACAGCTGAAGATGTCCACCTGCTTGGTCAGCTaGCCCACTCTGATGAAGTGTTCCGGCAGATATGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPQLKMSTCLVS*PTLMKCSGRYA Trigger: TGCATATCTGCCGGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS GCA 72 bp | TCGGCCAATACAATTCCACAGCTGAAGATGTCCACCTaGTTGGTCAGCTGCCCCACTCTGATGAAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SANTIPQLKMST*LVSCPTLMKCS Trigger: GGAACACTTCATCAGAGTGGGGCAGCTGACCAAGCAGGTGGACATCTTCAGCTGTGGAATTGTATTGGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 72 bp | TCTGGCAGATCTCTTTCACCACTGCCTTCCCCATGCTaGTCTTCCTGGAGCAGACTGAAGAAGTACTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRSLSPLPSPC*SSWSRLKKYCW Trigger: CCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGATCTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CCA 72 bp | TGGAATTGTCAACGTCATCTGTTTCCTCCGGGGTATTaGAAGATGAGCCTGTGGCCTCAGAAACCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WNCQRHLFPPGY*KMSLWPQKPCS Trigger: GGAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CAA 72 bp | CTGGAATTGTCAACGTCATCTGTTTCCTCCGGGGTATaGGAAGATGAGCCTGTGGCCTCAGAAACCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LELSTSSVSSGV*EDEPVASETLL Trigger: GAGCAGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
||
| CDS CAA 90 bp | GGGCACGATGCCATCATAACCAAAGAAGGGACGCTGAGGCTGGAATaGTCAACGTCATCTGTTTCCTCCGGGGTATTGGAAGATGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GHDAIITKEGTLRLE*STSSVSSGVLEDEP Trigger: AGGCTCATCTTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCAGCCTCAGCGTCCCTTCTTTGGTTATGATGGCATCGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CCA 72 bp | TCTCTTTCACCACTGCCTTCCCCATGCTGGTCTTCCTaGAGCAGACTGAAGAAGTACTGTTGGGAATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SLSPLPSPCWSS*SRLKKYCWESH Trigger: GTGAGATTCCCAACAGTACTTCTTCAGTCTGCTCCAGGAAGACCAGCATGGGGAAGGCAGTGGTGAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS CAA 72 bp | GCCATCATAACCAAAGAAGGGACGCTGAGGCTGGAATaGTCAACGTCATCTGTTTCCTCCGGGGTATTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AIITKEGTLRLE*STSSVSSGVLE Trigger: TTCCAATACCCCGGAGGAAACAGATGACGTTGACAATTCCAGCCTCAGCGTCCCTTCTTTGGTTATGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS TCA 72 bp | GATATGCAGCTGAGGCCTGGAACAGGTGAGTCCTCATaGCGGTATATTTGGTCTTTTTATTGTCGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: DMQLRPGTGESS*RYIWSFYCRDE Trigger: CTCATCCCGACAATAAAAAGACCAAATATACCGTCATGAGGACTCACCTGTTCCAGGCCTCAGCTGCATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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| CDS TCA 72 bp | TGGAGCAGACTGAAGAAGTACTGTTGGGAATCTCACTaGGAAGCAAATCCTTCAGGTAAACTGGACTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: WSRLKKYCWESH*EANPSGKLDCG Trigger: ACCGCAGTCCAGTTTACCTGAAGGATTTGCTTCTCAGTGAGATTCCCAACAGTACTTCTTCAGTCTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059286.14 ENSMUST00000089022.9 ENSMUST00000089023.11 |
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