Pregenerated sensors for IQUB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046192Ensembl transcript IDs: ENSMUST00000052277.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTaGGGTCATCTTAGTTTGGTTGTTCTTTTGCAGACTGGTTACCAG | + |
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Preference number: 1 (lower is better) Translates to: WSKGGCETGGLLSSS*GHLSLVVLLQTGYQ Trigger: CTGGTAACCAGTCTGCAAAAGAACAACCAAACTAAGATGACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCCTTTGCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR CCA 90 bp | GTGAGACTGGGGGTTTGTTATCTAGTTCTTGAGGTCATCTTAGTTTaGTTGTTCTTTTGCAGACTGGTTACCAGTCCTCGCAGTGATCTA | + |
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Preference number: 1 (lower is better) Translates to: VRLGVCYLVLEVILV*LFFCRLVTSPRSDL Trigger: TAGATCACTGCGAGGACTGGTAACCAGTCTGCAAAAGAACAACCAAACTAAGATGACCTCAAGAACTAGATAACAAACCCCCAGTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR CCA 90 bp | TGTGCCACGTTTGGATACATCATCATCACATATTTCAGACAGATATaGAGTCAGTGGTTATTGATTAGTTTATTGAGAAGCAGTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: CATFGYIIITYFRQI*SQWLLISLLRSSGQ Trigger: CTGTCCACTGCTTCTCAATAAACTAATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCAAACGTGGCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTCTCTCTGGGTTCTCTaGCTTCTCCATCAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: FPNGEGNWSKGGCETGGLSLWVL*LLHQIL Trigger: CAAAATCTGATGGAGAAGCCAGAGAACCCAGAGAGA...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTTGGATACAGAAGCAGTGGACAGTTaGTTTGATCAAGTTTATGCT | + |
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Preference number: 2 (lower is better) Translates to: VNKLFLNHALWGVPRLDTEAVDS*FDQVYA Trigger: AGCATAAACTTGATCAAATCAACTGTCCACTGCTTC...TGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR CAA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTaGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VNKLFLNHALWGVPR*DTSSSHISDRYGVS Trigger: ACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTGTTTGGTTGTTCTTTTaGAGACTGGTTACCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: FPNAFYLALHNCSTINSPVWLFF*RLVTSP Trigger: AGGACTGGTAACCAGTCTGCAAAAGAACAACCAAAC...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR CCA 90 bp | GTATACCTGAAACATGACCCTGGATTCCTTCTGTTTCCCTGTGTCACGTATGTCTTTATTGAGAAGCAGTaGACAGTTGATTTGATCAAG | + |
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Preference number: 2 (lower is better) Translates to: VYLKHDPGFLLFPCVTYVFIEKQ*TVDLIK Trigger: CTTGATCAAATCAACTGTCCACTGCTTCTCAATAAA...GACATACGTGACACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR TCA 72 bp | TGGGTTCTCTGGCTTCTCCATCAGATTTTGTATACCTaGAACATGACCCTGGATTCCTTCTGTTTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WVLWLLHQILYT*NMTLDSFCFPV Trigger: CACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATACAAAATCTGATGGAGAAGCCAGAGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR TCA 72 bp | GTTGTTCTTTTGCAGACTGGTTACCAGTCCTCGCAGTaGTCTACTTATCTCCTTTCCATTCTCTCTGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: VVLLQTGYQSSQ*STYLLSILSGF Trigger: GAACCCAGAGAGAATGGAAAGGAGATAAGTAGATCACTGCGAGGACTGGTAACCAGTCTGCAAAAGAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR TCA 72 bp | GGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTaGGGTCATCTTAGTTTGGTTGTTCTTTTGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: GGCETGGLLSSS*GHLSLVVLLQT Trigger: AGTCTGCAAAAGAACAACCAAACTAAGATGACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR GCA 72 bp | CTAGTTCTTGAGGTCATCTTAGTTTGGTTGTTCTTTTaGAGACTGGTTACCAGTCCTCGCAGTGATCTACTT | + |
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Preference number: 3 (lower is better) Translates to: LVLEVILVWLFF*RLVTSPRSDLL Trigger: AAGTAGATCACTGCGAGGACTGGTAACCAGTCTGCAAAAGAACAACCAAACTAAGATGACCTCAAGAACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR CAA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATTTTCTACTGTTTGCCTaGTTTCATGGCATGCAATGC | + |
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Preference number: 3 (lower is better) Translates to: WIHHHHIFQTDMESVVIDFLLFA*FHGMQC Trigger: GCATTGCATGCCATGAAACAAGGCAAACAGTAGAAA...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR-3UTR CAA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATCAGTGGACAGTTGATTaGATCAAGTTTATGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: WIHHHHIFQTDMESVVIDQWTVD*IKFMLL Trigger: AAGAAGCATAAACTTGATCAAATCAACTGTCCACTG...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGCAGCGGTACACACGGTaGGAGGTGGGTGAGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLQRYTR*EVGETE Trigger: TTCTGTCTCACCCACCTCCCACCGTGTGTACCGCTG...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGGCACTGAGGGCCGACTaGGATGCCCAGATGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLALRAD*DAQMFS Trigger: AGAGAACATCTGGGCATCCCAGTCGGCCCTCAGTGC...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTCCAGCCTCTCGTCTTaGGAGAGGTCTTTCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLSSLSS*ERSFSR Trigger: CCTGCTGAAAGACCTCTCTCAAGACGAGAGGCTGGA...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGGAGGGCCGACTGGGATaGCCAGATGTTCTCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLEGRLG*PDVLCQ Trigger: TTGACAGAGAACATCTGGGCATCCCAGTCGGCCCTC...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGGGATACACTTGTAGATaGTTTGCAGCTCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLGYTCR*FAALWL Trigger: GAGCCAGAGAGCTGCAAAGCATCTACAAGTGTATCC...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTTGGATACAACGGTGGGAGGTGGGTaGGACAGAAAACTCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VNKLFLNHALWGVPRLDTTVGGG*DRKLHR Trigger: TCTGTGGAGTTTTCTGTCTCACCCACCTCCCACCGT...TGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTGAGGTCTGCTTTCATCCTTGGTaGGAAGAATGCAGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGAKEGVRLGVCYLVLEVCFHPW*EECSSR Trigger: CCTGGAACTGCATTCTTCTCACCAAGGATGAAAGCA...GACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGATCTTCAGGAGTTCTTaGTCTTCTTCCCACTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: FPNGEGNWSKGGCETGGLIFRSS*SSSHSN Trigger: GTTGGAGTGGGAAGAAGAGCAAGAACTCCTGAAGAT...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | ACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTGAGGTCATCTATGTCTCCCGATaGAAGCAATCATCTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGAKEGVRLGVCYLVLEVIYVSR*KQSSVS Trigger: AGACACAGATGATTGCTTCCATCGGGAGACATAGAT...GACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTTTGATCCTGAGATCCTaGGGCACTTCCAAGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPLILRS*GTSKGR Trigger: ACGTCCCTTGGAAGTGCCTCAGGATCTCAGGATCAA...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTGAGGTCTGTGTTCCAGCGTTGTaGTATTCTAGTCCTGTTATT | + |
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Preference number: 4 (lower is better) Translates to: TGAKEGVRLGVCYLVLEVCVPAL*YSSPVI Trigger: AATAACAGGACTAGAATATCACAACGCTGGAACACA...GACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | GTATACCTGAAACATGACCCTGGATTCCTTCTGTTTCCCTGTGTCACGTATGTCCCAGACATTTGGAGCTaGACACTTATCCAGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VYLKHDPGFLLFPCVTYVPDIWS*TLIQKS Trigger: GCTTTTCTGGATAAGTGTTCAGCTCCAAATGTCTGG...GACATACGTGACACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTTGGATACATGCACTTCATCGTCTTaGTCTGGCATCACATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: VNKLFLNHALWGVPRLDTCTSSS*SGITSD Trigger: GTCAGATGTGATGCCAGAGCAAGACGATGAAGTGCA...TGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATCACTTCCAAGGGACGTaGCCTCTTCCCTGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDHFQGT*PLPWVW Trigger: CCAAACCCAGGGAAGAGGTCACGTCCCTTGGAAGTG...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTTGGATACAGTGGTACTCTGCTGCTaGAAAGTAATTTCCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VNKLFLNHALWGVPRLDTVVLCC*KVISWL Trigger: AAGCCAGGAAATTACTTTTCAGCAGCAGAGTACCAC...TGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTTATCTAGTTCTTGAGGTCAGTTCTAGGATTTCTTaGGTCAGTTTACACTCATGT | + |
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Preference number: 4 (lower is better) Translates to: TGAKEGVRLGVCYLVLEVSSRIS*VSLHSC Trigger: ACATGAGTGTAAACTGACTCAAGAAATCCTAGAACT...GACCTCAAGAACTAGATAACAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTAACGATTCCCGCCTCTaGGTCTCATTCTCCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPNDSRL*VSFSRF Trigger: AAACCTGGAGAATGAGACTCAGAGGCGGGAATCGTT...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | CATGACCTCTGTATTACTCTCATCGTAGAGAACAAAACCTCTCATCTTCAAATTCTCGGTAGCCTGAGGTaGGCTGTGCTTTCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HDLCITLIVENKTSHLQILGSLR*AVLSSL Trigger: CAAGGATGAAAGCACAGCTCACCTCAGGCTACCGAG...AATTTGAAGATGAGAGGTTTTGTTCTCTACGATGAGAGTAATACAGAGGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | GTATACCTGAAACATGACCCTGGATTCCTTCTGTTTCCCTGTGTCACGTATGTCCCATTTCAATGGTTTTaGCATCACCTCTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYLKHDPGFLLFPCVTYVPFQWF*HHLFSR Trigger: TCTGGAGAAGAGGTGATGGCAAAACCATTGAAATGG...GACATACGTGACACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | GTATACCTGAAACATGACCCTGGATTCCTTCTGTTTCCCTGTGTCACGTATGTCCCAATTTTAGTCATCTaGGTGGAGGTGGTATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VYLKHDPGFLLFPCVTYVPILVI*VEVVFV Trigger: TACAAATACCACCTCCACTCAGATGACTAAAATTGG...GACATACGTGACACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTAGTCCTTCGAGATTATaGGGTTTGACTCCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPSPSRL*GLTPLI Trigger: GATGAGAGGAGTCAAACCTCATAATCTCGAAGGACT...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTTTATCCAGAAAAGCTTaGATAGCTGCATCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPLSRKA*IAASCL Trigger: GAGGCAGGATGCAGCTATCCAAGCTTTTCTGGATAA...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATACACACGGTGGGAGGTaGGTGAGACAGAAAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDTHGGR*VRQKTP Trigger: TGGAGTTTTCTGTCTCACCCACCTCCCACCGTGTGT...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| 3UTR CAA 72 bp | CTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTaGGATACATCATCATCACATATTTCAGACAGATAT | + |
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Preference number: 4 (lower is better) Translates to: LFLNHALWGVPR*DTSSSHISDRY Trigger: ATATCTGTCTGAAATATGTGATGATGATGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTAGTAATTTCCTGGCTTaGGCAGTTTATCGGTCATGT | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPSNFLA*AVYRSC Trigger: ACATGACCGATAAACTGCTCAAGCCAGGAAATTACT...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTCTTCTGACTGGATATTaGTCAGGAAGTGTGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPLLTGY*SGSVEN Trigger: GTTTTCCACACTTCCTGACCAATATCCAGTCAGAAG...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | GAAATATATAGGTGGTTTTCCATGTCACATGACCTCTGTATTACTCTCATCGTAAGCCCTCTATTCTTCTaGCTGGATATTGGTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: EIYRWFSMSHDLCITLIVSPLFF*LDIGQE Trigger: TTCCTGACCAATATCCAGTCAGAAGAATAGAGGGCT...TACGATGAGAGTAATACAGAGGTCATGTGACATGGAAAACCACCTATATATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTCAACGTTGGGATCTGTaGAAAATAGTTTTTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPQRWDL*KIVFSQ Trigger: CTGGCTAAAAACTATTTTTCACAGATCCCAACGTTG...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TATAGGTGGTTTTCCATGTCACATGACCTCTGTATTACTCTCATCGTAGAGAACGGCATTATAATTTCCTaGCCTGCAGGAATAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: YRWFSMSHDLCITLIVENGIIIS*PAGIST Trigger: TGTACTTATTCCTGCAGGCCAGGAAATTATAATGCC...GTTCTCTACGATGAGAGTAATACAGAGGTCATGTGACATGGAAAACCACCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR CCA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTATCATAAAACTTCAGTaGGTCTTGAGGGACCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: FPNAFYLALHNCSTINSPIIKLQ*VLRDLK Trigger: CTTAAGGTCCCTCAAGACCCACTGAAGTTTTATGAT...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATCATTCTTCCTTCTCTTaGATCTTCAGGAGTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDHSSFS*IFRSSC Trigger: GCAAGAACTCCTGAAGATTCAAGAGAAGGAAGAATG...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR GCA 90 bp | CATGACCTCTGTATTACTCTCATCGTAGAGAACAAAACCTCTCATCTTCAAATTGACCTTAAGGTACTTTaGAACTTCAGGATTAAACAG | + |
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Preference number: 4 (lower is better) Translates to: HDLCITLIVENKTSHLQIDLKVL*NFRIKQ Trigger: CTGTTTAATCCTGAAGTTGCAAAGTACCTTAAGGTC...AATTTGAAGATGAGAGGTTTTGTTCTCTACGATGAGAGTAATACAGAGGTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS-3UTR TCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATGGATATGTTTGTGCTTaGTCTTGTGAACAAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDGYVCA*SCEQNG Trigger: ACCATTTTGTTCACAAGATCAAGCACAAACATATCC...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR TCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATTGGAGTGTTTACTCCTaGTATCTTCTACTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDWSVYS*YLLLHH Trigger: ATGATGAAGTAGAAGATATCAGGAGTAAACACTCCA...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CCA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATCTTGAGGAATCTAAATaGAGCATCAACTCTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WIHHHHIFQTDMESVVIDLEESK*SINSKR Trigger: CCTTTTAGAGTTGATGCTCCATTTAGATTCCTCAAG...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CCA 90 bp | CATGACCTCTGTATTACTCTCATCGTAGAGAACAAAACCTCTCATCTTCAAATTCCAAGAAATGGCTTGTaGAAGTCAGATTTTATTATC | + |
|
Preference number: 4 (lower is better) Translates to: HDLCITLIVENKTSHLQIPRNGL*KSDFII Trigger: GATAATAAAATCTGACTTCCACAAGCCATTTCTTGG...AATTTGAAGATGAGAGGTTTTGTTCTCTACGATGAGAGTAATACAGAGGTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 90 bp | GGTTTGGAGTCGTCGGATTTGGGGGTTGAAAGACTAAATTCACTATaGCTCTCCACGTTCTCCTCGCTCTCGGTGGTGAGTTCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GLESSDLGVERLNSL*LSTFSSLSVVSSCT Trigger: AGTGCAGGAACTCACCACCGAGAGCGAGGAGAACGTGGAGAGGCATAGTGAATTTAGTCTTTCAACCCCCAAATCCGACGACTCCAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 90 bp | TCTCCAGGTTTATGCAGTGGCGGCAGCGGTACACACGGTGGGAGGTaGGTGAGACAGAAAACTCCACAGAAGGCAAATAATTTTGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPGLCSGGSGTHGGR*VRQKTPQKANNFGN Trigger: GTTGCCAAAATTATTTGCCTTCTGTGGAGTTTTCTGTCTCACCCACCTCCCACCGTGTGTACCGCTGCCGCCACTGCATAAACCTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGATCCAGCCTCTCGTCTaGAGAGAGGTCTTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPNGEGNWSKGGCETGGLIQPLV*REVFQQ Trigger: CTGCTGAAAGACCTCTCTCAAGACGAGAGGCTGGAT...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 90 bp | TTTGGAGCTGAACACTTATCCAGAAAAGCTTGGATAGCTGCATCCTaGCTCTCCATACGAGCAGCGGATCTATGTCTCCCGATGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FGAEHLSRKAWIAAS*LSIRAADLCLPMEA Trigger: TGCTTCCATCGGGAGACATAGATCCGCTGCTCGTATGGAGAGGCAGGATGCAGCTATCCAAGCTTTTCTGGATAAGTGTTCAGCTCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 90 bp | GACCAGGTCATTGAGATCATCCCAGGCACTGAGGGCCGACTGGGATaGCCAGATGTTCTCTGTCAAGTATTTAATATCCTGAAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DQVIEIIPGTEGRLG*PDVLCQVFNILKLH Trigger: ATGCAGCTTCAGGATATTAAATACTTGACAGAGAACATCTGGGCATCCCAGTCGGCCCTCAGTGCCTGGGATGATCTCAATGACCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTCTTCTGACTGGATATaGGTCAGGAAGTGTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPNGEGNWSKGGCETGGLSSDWI*VRKCGK Trigger: TTTTCCACACTTCCTGACCAATATCCAGTCAGAAGA...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 90 bp | CGTTATGATCTGGGAGCCCTCACTCAAGCCCTCTATTCTTCTGACTaGATATTGGTCAGGAAGTGTGGAAAACACCTCCACTTGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RYDLGALTQALYSSD*ILVRKCGKHLHLNN Trigger: ATTGTTCAAGTGGAGGTGTTTTCCACACTTCCTGACCAATATCCAGTCAGAAGAATAGAGGGCTTGAGTGAGGGCTCCCAGATCATAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 90 bp | GCAGGATACACTTGTAGATGCTTTGCAGCTCTCTGGCTCTTATCGTaGACTGTGTATCCATTTCAATGGTTTTGCCATCACCTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGYTCRCFAALWLLS*TVYPFQWFCHHLFS Trigger: GGAGAAGAGGTGATGGCAAAACCATTGAAATGGATACACAGTTCACGATAAGAGCCAGAGAGCTGCAAAGCATCTACAAGTGTATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 90 bp | TCCTCCAAGAAATGGCTTGTGGAAGTCAGATTTTATTATCTCAACTaGTACCTCCTCATAGCGATCGATGCTGGTCTGAATGGTGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSKKWLVEVRFYYLN*YLLIAIDAGLNGDR Trigger: ACGGTCACCATTCAGACCAGCATCGATCGCTATGAGGAGGTAGCAGTTGAGATAATAAAATCTGACTTCCACAAGCCATTTCTTGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGTCCCTACAGAACAGATaGTCTTTTTCAGGAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPNGEGNWSKGGCETGGLSLQNR*SFSGIF Trigger: AAAGATTCCTGAAAAAGACAATCTGTTCTGTAGGGA...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | GTATACCTGAAACATGACCCTGGATTCCTTCTGTTTCCCTGTGTCACGTATGTCCTCTTCTCCAGACATTaGGAGCTGAACACTTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYLKHDPGFLLFPCVTYVLFSRH*ELNTYP Trigger: TGGATAAGTGTTCAGCTCCAAATGTCTGGAGAAGAG...GACATACGTGACACAGGGAAACAGAAGGAATCCAGGGTCATGTTTCAGGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAATGGAGAAGGCAACTGGAGCAAAGGAGGGTGTGAGACTGGGGGTTTGAGAAGGCAAATAATTTaGGCAACTGTGGCAAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPNGEGNWSKGGCETGGLRRQII*ATVAKV Trigger: TACTTTTGCCACAGTTGCCAAAATTATTTGCCTTCT...CAAACCCCCAGTCTCACACCCTCCTTTGCTCCAGTTGCCTTCTCCATTTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | GTAAATAAGCTCTTCTTGAACCATGCTCTTTGGGGTGTGCCACGTTTGGATACACTTTCTAGGTACAGTTaGTGTTCCAGCGTTGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VNKLFLNHALWGVPRLDTLSRYS*CSSVVI Trigger: TATCACAACGCTGGAACACAAACTGTACCTAGAAAG...TGTATCCAAACGTGGCACACCCCAAAGAGCATGGTTCAAGAAGAGCTTATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAATGCTTTCTATTTAGCCCTCCATAACTGTTCAACCATTAACTCCCCTTCCATTTCAATGGTTTaGCCATCACCTCTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPNAFYLALHNCSTINSPSISMV*PSPLLQ Trigger: CTGGAGAAGAGGTGATGGCAAAACCATTGAAATGGA...AGGGGAGTTAATGGTTGAACAGTTATGGAGGGCTAAATAGAAAGCATTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 90 bp | CTCATCATAAGGTCAACTTCTCTGTCAATCAGTTCTAGGATTTCTTaGGTCAGTTTACACTCATGTTCCTTCACAGTGTGTTTAAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIIRSTSLSISSRIS*VSLHSCSFTVCLSV Trigger: GACGCTTAAACACACTGTGAAGGAACATGAGTGTAAACTGACTCAAGAAATCCTAGAACTGATTGACAGAGAAGTTGACCTTATGATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | GAAATATATAGGTGGTTTTCCATGTCACATGACCTCTGTATTACTCTCATCGTAAATCTTCAGGAGTTCTaGCTCTTCTTCCCACTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EIYRWFSMSHDLCITLIVNLQEF*LFFPLQ Trigger: TTGGAGTGGGAAGAAGAGCAAGAACTCCTGAAGATT...TACGATGAGAGTAATACAGAGGTCATGTGACATGGAAAACCACCTATATATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | TGGATACATCATCATCACATATTTCAGACAGATATGGAGTCAGTGGTTATTGATCGGGTTATTATGATTTaGGGTGGACTCTTTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WIHHHHIFQTDMESVVIDRVIMI*GGLFVE Trigger: CTCCACAAAGAGTCCACCCAAAATCATAATAACCCG...ATCAATAACCACTGACTCCATATCTGTCTGAAATATGTGATGATGATGTATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS-3UTR CAA 90 bp | GAAATATATAGGTGGTTTTCCATGTCACATGACCTCTGTATTACTCTCATCGTAGGAAAACACCTCCACTaGAACAATTTCTTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EIYRWFSMSHDLCITLIVGKHLH*NNFLWF Trigger: AAACCACAAGAAATTGTTCAAGTGGAGGTGTTTTCC...TACGATGAGAGTAATACAGAGGTCATGTGACATGGAAAACCACCTATATATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 90 bp | TGCAGGAATAAGTACAATTTTTACTGTTGCTATAGACTCTCTCACTaGCGTCTGCAAAGTCTCCTTTATAGCTTTTATCTTATGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRNKYNFYCCYRLSH*RLQSLLYSFYLMQK Trigger: TTTCTGCATAAGATAAAAGCTATAAAGGAGACTTTGCAGACGTCAGTGAGAGAGTCTATAGCAACAGTAAAAATTGTACTTATTCCTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | GGAGACCACTCCACGTGTTTATCCCACCTGACCATGACCAGGTCATaGAGATCATCCCAGGCACTGAGGGCCGACTGGGATGCCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GDHSTCLSHLTMTRS*RSSQALRADWDAQM Trigger: CATCTGGGCATCCCAGTCGGCCCTCAGTGCCTGGGATGATCTCAATGACCTGGTCATGGTCAGGTGGGATAAACACGTGGAGTGGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 72 bp | TCCAGGTTTATGCAGTGGCGGCAGCGGTACACACGGTaGGAGGTGGGTGAGACAGAAAACTCCACAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRFMQWRQRYTR*EVGETENSTEG Trigger: GCCTTCTGTGGAGTTTTCTGTCTCACCCACCTCCCACCGTGTGTACCGCTGCCGCCACTGCATAAACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | CTTGATCCTGAGATCCTGAGGCACTTCCAAGGGACGTaGCCTCTTCCCTGGGTTTGGAGTCGTCGGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LDPEILRHFQGT*PLPWVWSRRIW Trigger: CCAAATCCGACGACTCCAAACCCAGGGAAGAGGTCACGTCCCTTGGAAGTGCCTCAGGATCTCAGGATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 72 bp | TTATGCAGTGGCGGCAGCGGTACACACGGTGGGAGGTaGGTGAGACAGAAAACTCCACAGAAGGCAAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LCSGGSGTHGGR*VRQKTPQKANN Trigger: ATTATTTGCCTTCTGTGGAGTTTTCTGTCTCACCCACCTCCCACCGTGTGTACCGCTGCCGCCACTGCATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 72 bp | TCGTCGGATTTGGGGGTTGAAAGACTAAATTCACTATaGCTCTCCACGTTCTCCTCGCTCTCGGTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSDLGVERLNSL*LSTFSSLSVVS Trigger: ACTCACCACCGAGAGCGAGGAGAACGTGGAGAGGCATAGTGAATTTAGTCTTTCAACCCCCAAATCCGACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 72 bp | GAACACTTATCCAGAAAAGCTTGGATAGCTGCATCCTaGCTCTCCATACGAGCAGCGGATCTATGTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EHLSRKAWIAAS*LSIRAADLCLP Trigger: CGGGAGACATAGATCCGCTGCTCGTATGGAGAGGCAGGATGCAGCTATCCAAGCTTTTCTGGATAAGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 72 bp | CTGGGAGCCCTCACTCAAGCCCTCTATTCTTCTGACTaGATATTGGTCAGGAAGTGTGGAAAACACCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGALTQALYSSD*ILVRKCGKHLH Trigger: GTGGAGGTGTTTTCCACACTTCCTGACCAATATCCAGTCAGAAGAATAGAGGGCTTGAGTGAGGGCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 72 bp | GACGTGACCTCTTCCCTGGGTTTGGAGTCGTCGGATTaGGGGGTTGAAAGACTAAATTCACTATGCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVTSSLGLESSD*GVERLNSLCLS Trigger: GGAGAGGCATAGTGAATTTAGTCTTTCAACCCCCAAATCCGACGACTCCAAACCCAGGGAAGAGGTCACGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 72 bp | CAGACATTTGGAGCTGAACACTTATCCAGAAAAGCTTaGATAGCTGCATCCTGCCTCTCCATACGAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QTFGAEHLSRKA*IAASCLSIRAA Trigger: CGCTGCTCGTATGGAGAGGCAGGATGCAGCTATCCAAGCTTTTCTGGATAAGTGTTCAGCTCCAAATGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | TGTCCATACCCCTTTTCAATACTCGGTAGCCTGAGGTaGGCTGTGCTTTCATCCTTGGTGAGAAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPYPFSILGSLR*AVLSSLVRRMQ Trigger: CTGCATTCTTCTCACCAAGGATGAAAGCACAGCTCACCTCAGGCTACCGAGTATTGAAAAGGGGTATGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 72 bp | ATTGAGATCATCCCAGGCACTGAGGGCCGACTGGGATaGCCAGATGTTCTCTGTCAAGTATTTAATATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IEIIPGTEGRLG*PDVLCQVFNIL Trigger: CAGGATATTAAATACTTGACAGAGAACATCTGGGCATCCCAGTCGGCCCTCAGTGCCTGGGATGATCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CCA 72 bp | AGGTCATTGAGATCATCCCAGGCACTGAGGGCCGACTaGGATGCCCAGATGTTCTCTGTCAAGTATTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: RSLRSSQALRAD*DAQMFSVKYLI Trigger: TATTAAATACTTGACAGAGAACATCTGGGCATCCCAGTCGGCCCTCAGTGCCTGGGATGATCTCAATGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 72 bp | GCCCTCACTCAAGCCCTCTATTCTTCTGACTGGATATaGGTCAGGAAGTGTGGAAAACACCTCCACTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALTQALYSSDWI*VRKCGKHLHLN Trigger: GTTCAAGTGGAGGTGTTTTCCACACTTCCTGACCAATATCCAGTCAGAAGAATAGAGGGCTTGAGTGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | GATCTGGGAGCCCTCACTCAAGCCCTCTATTCTTCTGACTGGATATaGGTCAGGAAGTGTGGAAAACACCTCCACTTGAACAATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLGALTQALYSSDWI*VRKCGKHLHLNNFL Trigger: CAAGAAATTGTTCAAGTGGAGGTGTTTTCCACACTTCCTGACCAATATCCAGTCAGAAGAATAGAGGGCTTGAGTGAGGGCTCCCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | CTTCACAGTGTGTTTAAGCGTCAGGAGTATATCCAGCCTCTCGTCTaGAGAGAGGTCTTTCAGCAGGATACACTTGTAGATGCTTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSVFKRQEYIQPLV*REVFQQDTLVDALQ Trigger: CTGCAAAGCATCTACAAGTGTATCCTGCTGAAAGACCTCTCTCAAGACGAGAGGCTGGATATACTCCTGACGCTTAAACACACTGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | GTTGTGCCTCCGGTAATAGTCCATTCGTATCCATTCTTCCTTCTCTaGAATCTTCAGGAGTTCTTGCTCTTCTTCCCACTCCAACCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VVPPVIVHSYPFFLL*NLQEFLLFFPLQPQ Trigger: TTGAGGTTGGAGTGGGAAGAAGAGCAAGAACTCCTGAAGATTCAAGAGAAGGAAGAATGGATACGAATGGACTATTACCGGAGGCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | GGTTTTGCCATCACCTCTTCTCCAGACATTTGGAGCTaGACACTTATCCAGAAAAGCTTGGATAGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GFAITSSPDIWS*TLIQKSLDSCI Trigger: GATGCAGCTATCCAAGCTTTTCTGGATAAGTGTTCAGCTCCAAATGTCTGGAGAAGAGGTGATGGCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 72 bp | GTGTTTAAGCGTCAGGAGTATATCCAGCCTCTCGTCTaGAGAGAGGTCTTTCAGCAGGATACACTTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VFKRQEYIQPLV*REVFQQDTLVD Trigger: ATCTACAAGTGTATCCTGCTGAAAGACCTCTCTCAAGACGAGAGGCTGGATATACTCCTGACGCTTAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | AGCTCTCTGGCTCTTATCGTGAACTGTGTATCCATTTCAATGGTTTaGCCATCACCTCTTCTCCAGACATTTGGAGCTGAACACTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLALIVNCVSISMV*PSPLLQTFGAEHLS Trigger: GGATAAGTGTTCAGCTCCAAATGTCTGGAGAAGAGGTGATGGCAAAACCATTGAAATGGATACACAGTTCACGATAAGAGCCAGAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 90 bp | CTCGTCTTGAGAGAGGTCTTTCAGCAGGATACACTTGTAGATGCTTaGCAGCTCTCTGGCTCTTATCGTGAACTGTGTATCCATTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LVLREVFQQDTLVDA*QLSGSYRELCIHFN Trigger: ATTGAAATGGATACACAGTTCACGATAAGAGCCAGAGAGCTGCAAAGCATCTACAAGTGTATCCTGCTGAAAGACCTCTCTCAAGACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | ACTTGTAGATGCTTTGCAGCTCTCTGGCTCTTATCGTaGACTGTGTATCCATTTCAATGGTTTTGCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: TCRCFAALWLLS*TVYPFQWFCHH Trigger: GTGATGGCAAAACCATTGAAATGGATACACAGTTCACGATAAGAGCCAGAGAGCTGCAAAGCATCTACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | AGCGTTGTGATTCTCTTTCTGAGTCCTTCGAGATTATaGGGTTTGACTCCTCTCATCATAAGGTCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVVILFLSPSRL*GLTPLIIRSTS Trigger: AGAAGTTGACCTTATGATGAGAGGAGTCAAACCTCATAATCTCGAAGGACTCAGAAAGAGAATCACAACGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS GCA 72 bp | AAATGGCTTGTGGAAGTCAGATTTTATTATCTCAACTaGTACCTCCTCATAGCGATCGATGCTGGTCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KWLVEVRFYYLN*YLLIAIDAGLN Trigger: ATTCAGACCAGCATCGATCGCTATGAGGAGGTAGCAGTTGAGATAATAAAATCTGACTTCCACAAGCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS TCA 72 bp | GGATATTGGTCAGGAAGTGTGGAAAACACCTCCACTTaGACAATTTCTTGTGGTTTGATTCCATATTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: GYWSGSVENTST*TISCGLIPYCI Trigger: AATACAATATGGAATCAAACCACAAGAAATTGTTCAAGTGGAGGTGTTTTCCACACTTCCTGACCAATATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
||
| CDS CAA 72 bp | TGGATATTGGTCAGGAAGTGTGGAAAACACCTCCACTaGAACAATTTCTTGTGGTTTGATTCCATATTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: WILVRKCGKHLH*NNFLWFDSILY Trigger: ATACAATATGGAATCAAACCACAAGAAATTGTTCAAGTGGAGGTGTTTTCCACACTTCCTGACCAATATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS GCA 72 bp | ATTTTTACTGTTGCTATAGACTCTCTCACTGACGTCTaGAAAGTCTCCTTTATAGCTTTTATCTTATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IFTVAIDSLTDV*KVSFIAFILCR Trigger: TCTGCATAAGATAAAAGCTATAAAGGAGACTTTGCAGACGTCAGTGAGAGAGTCTATAGCAACAGTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS CCA 72 bp | GTTATTTTATGTCTAAATCCTCCAAGAAATGGCTTGTaGAAGTCAGATTTTATTATCTCAACTGCTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VILCLNPPRNGL*KSDFIISTATS Trigger: GGAGGTAGCAGTTGAGATAATAAAATCTGACTTCCACAAGCCATTTCTTGGAGGATTTAGACATAAAATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS TCA 72 bp | AAGTACAATTTTTACTGTTGCTATAGACTCTCTCACTaGCGTCTGCAAAGTCTCCTTTATAGCTTTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: KYNFYCCYRLSH*RLQSLLYSFYL Trigger: AAGATAAAAGCTATAAAGGAGACTTTGCAGACGTCAGTGAGAGAGTCTATAGCAACAGTAAAAATTGTACTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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| CDS GCA 72 bp | AGCATCAACTCTAAAAGGCATTATAATTTCCTGGCCTaGAGGAATAAGTACAATTTTTACTGTTGCTATAGA | + |
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Preference number: 6 (lower is better) Translates to: SINSKRHYNFLA*RNKYNFYCCYR Trigger: TCTATAGCAACAGTAAAAATTGTACTTATTCCTGCAGGCCAGGAAATTATAATGCCTTTTAGAGTTGATGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052277.5 |
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