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Pregenerated sensors for IQSCHFP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000102422

Ensembl transcript IDs: ENSMUST00000182006.4

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAGCGAAGGCCAGTCACGGGACAGTAAGCTCGGACGTTACCAATaGCTAACACTGATGTCTGTTTCGGAACCACCTTTAGCAACAGCA +
Preference number: 1 (lower is better)
Translates to: RSEGQSRDSKLGRYQ*LTLMSVSEPPLATA
Trigger: TGCTGTTGCTAAAGGTGGTTCCGAAACAGACATCAGTGTTAGTCATTGGTAACGTCCGAGCTTACTGTCCCGTGACTGGCCTTCGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR CAA 90 bp CGTAGTATGGAGAGCTACGACTTCACTACGAGGCAGGCATGTATTTaGACTTGTATAGCACCGTCATTTACAGTTCCTCTTCAAAGCTAC +
Preference number: 2 (lower is better)
Translates to: RSMESYDFTTRQACI*TCIAPSFTVPLQSY
Trigger: GTAGCTTTGAAGAGGAACTGTAAATGACGGTGCTATACAAGTCAAAATACATGCCTGCCTCGTAGTGAAGTCGTAGCTCTCCATACTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR TCA 72 bp GGCCAGTCACGGGACAGTAAGCTCGGACGTTACCAATaGCTAACACTGATGTCTGTTTCGGAACCACCTTTA +
Preference number: 3 (lower is better)
Translates to: GQSRDSKLGRYQ*LTLMSVSEPPL
Trigger: TAAAGGTGGTTCCGAAACAGACATCAGTGTTAGTCATTGGTAACGTCCGAGCTTACTGTCCCGTGACTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR CCA 72 bp CAAAGTCAAAACTACCCTCTGCTTATCCACGGTTGTTaGTGGTTTAAGTACTGTACAGTTCTTGTAACAATG +
Preference number: 3 (lower is better)
Translates to: QSQNYPLLIHGC*WFKYCTVLVTM
Trigger: CATTGTTACAAGAACTGTACAGTACTTAAACCACCAACAACCGTGGATAAGCAGAGGGTAGTTTTGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR CCA 72 bp AGTCAAAACTACCCTCTGCTTATCCACGGTTGTTGGTaGTTTAAGTACTGTACAGTTCTTGTAACAATGTTT +
Preference number: 3 (lower is better)
Translates to: SQNYPLLIHGCW*FKYCTVLVTMF
Trigger: AAACATTGTTACAAGAACTGTACAGTACTTAAACCACCAACAACCGTGGATAAGCAGAGGGTAGTTTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR CAA 72 bp GAGAGCTACGACTTCACTACGAGGCAGGCATGTATTTaGACTTGTATAGCACCGTCATTTACAGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ESYDFTTRQACI*TCIAPSFTVPL
Trigger: AAGAGGAACTGTAAATGACGGTGCTATACAAGTCAAAATACATGCCTGCCTCGTAGTGAAGTCGTAGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
3UTR CAA 72 bp CTACGACTTCACTACGAGGCAGGCATGTATTTTGACTaGTATAGCACCGTCATTTACAGTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRLHYEAGMYFD*YSTVIYSSSSK
Trigger: CTTTGAAGAGGAACTGTAAATGACGGTGCTATACAAGTCAAAATACATGCCTGCCTCGTAGTGAAGTCGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 90 bp GACCCGCGTCCCGCCGTCCGGTGGCTGAAGGCAGAGGCCCCCAGATaGCCGGTTTCGGCCTCCGCGCCGGCTCCCTGGAGGCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: DPRPAVRWLKAEAPR*PVSASAPAPWRLGL
Trigger: AAGACCCAGCCTCCAGGGAGCCGGCGCGGAGGCCGAAACCGGGCATCTGGGGGCCTCTGCCTTCAGCCACCGGACGGCGGGACGCGGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 90 bp TGGATTGTGAGCTGGCGCGGCTGCTGCTGCTGCTGCCGGCGTCACTaGCTAGATCCATCCCATCCTCTCGGTAATCGGGTGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WIVSWRGCCCCCRRH*LDPSHPLGNRVCCC
Trigger: ACAGCAGCACACCCGATTACCGAGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCCGCGCCAGCTCACAATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 90 bp GGGTCACTTTGGTGGAGTTGGATTGTGAGCTGGCGCGGCTGCTGCTaGTGCTGCCGGCGTCACTGCCTAGATCCATCCCATCCTCTCGGT +
Preference number: 5 (lower is better)
Translates to: GSLWWSWIVSWRGCC*CCRRHCLDPSHPLG
Trigger: ACCGAGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCCGCGCCAGCTCACAATCCAACTCCACCAAAGTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 90 bp AAACTTTCAATCTGGGAGTGGAGGTCATTGACGATCACTTGTAGCTaGCCGATAGTCATGTCTCTCAGGTCGGTGGGCTTTAAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: KLSIWEWRSLTITCS*PIVMSLRSVGFKLL
Trigger: AAGAAGCTTAAAGCCCACCGACCTGAGAGACATGACTATCGGGCAGCTACAAGTGATCGTCAATGACCTCCACTCCCAGATTGAAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 90 bp CTAGTCAAGTCTTCAATGTCCACCAGCATGGCATCTTGTTCTGTGTaGAGCTCATCTCGAATAAGGAGCAGCTGGACCAACTCTTCATTC +
Preference number: 5 (lower is better)
Translates to: LVKSSMSTSMASCSV*SSSRIRSSWTNSSF
Trigger: GAATGAAGAGTTGGTCCAGCTGCTCCTTATTCGAGATGAGCTGCACACAGAACAAGATGCCATGCTGGTGGACATTGAAGACTTGACTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS GCA 72 bp AGCTGGCGCGGCTGCTGCTGCTGCTGCCGGCGTCACTaGCTAGATCCATCCCATCCTCTCGGTAATCGGGTG +
Preference number: 6 (lower is better)
Translates to: SWRGCCCCCRRH*LDPSHPLGNRV
Trigger: CACCCGATTACCGAGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCCGCGCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp GATTTGCACTCGGAGCAAGGGGTCACTTTGGTGGAGTaGGATTGTGAGCTGGCGCGGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DLHSEQGVTLVE*DCELARLLLLL
Trigger: CAGCAGCAGCAGCAGCCGCGCCAGCTCACAATCCAACTCCACCAAAGTGACCCCTTGCTCCGAGTGCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp GCCAGCTACCACCACGTTGCCATTGTGCCTGAGGTCTaGAGGGTCGTGCGGATGGAGGTTGCCGTTAGGCAT +
Preference number: 6 (lower is better)
Translates to: ASYHHVAIVPEV*RVVRMEVAVRH
Trigger: ATGCCTAACGGCAACCTCCATCCGCACGACCCTCAAGACCTCAGGCACAATGGCAACGTGGTGGTAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 90 bp GTGCTGCTGTCGGAGAAGGTGTTCATGCTGACAGAGCTGCTCAGCTaGTCTGAAGAGACAGAAGGTGGGGATGGGCTCCGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VLLSEKVFMLTELLS*SEETEGGDGLRFSR
Trigger: CCTGGAGAAGCGGAGCCCATCCCCACCTTCTGTCTCTTCAGACAAGCTGAGCAGCTCTGTCAGCATGAACACCTTCTCCGACAGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp GACGATGAGGATTTGCACTCGGAGCAAGGGGTCACTTaGGTGGAGTTGGATTGTGAGCTGGCGCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DDEDLHSEQGVT*VELDCELARLL
Trigger: CAGCAGCCGCGCCAGCTCACAATCCAACTCCACCAAAGTGACCCCTTGCTCCGAGTGCAAATCCTCATCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS TCA 72 bp GAAGGTGTTCATGCTGACAGAGCTGCTCAGCTTGTCTaGAGAGACAGAAGGTGGGGATGGGCTCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: EGVHADRAAQLV*RDRRWGWAPLL
Trigger: GAGAAGCGGAGCCCATCCCCACCTTCTGTCTCTTCAGACAAGCTGAGCAGCTCTGTCAGCATGAACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS TCA 72 bp AATCGGGTGTGCTGCTGTCGGAGAAGGTGTTCATGCTaGCAGAGCTGCTCAGCTTGTCTGAAGAGACAGAAG +
Preference number: 6 (lower is better)
Translates to: NRVCCCRRRCSC*QSCSACLKRQK
Trigger: CTTCTGTCTCTTCAGACAAGCTGAGCAGCTCTGTCAGCATGAACACCTTCTCCGACAGCAGCACACCCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp GGAGGTTCATCCCGCTCTGTAGTCTTGCAGAAAGGCTaGGCTTCCCACTTTTGCTGCAGCTGGTATAGATTC +
Preference number: 6 (lower is better)
Translates to: GGSSRSVVLQKG*ASHFCCSWYRF
Trigger: GAATCTATACCAGCTGCAGCAAAAGTGGGAAGCCAAGCCTTTCTGCAAGACTACAGAGCGGGATGAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp TCATCTGCATCGCTGTCCTTGTCACTGCCGCTGTCATaGACAAAGCATATCTGGAGGTTCATCCCGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SSASLSLSLPLS*TKHIWRFIPLC
Trigger: ACAGAGCGGGATGAACCTCCAGATATGCTTTGTCAATGACAGCGGCAGTGACAAGGACAGCGATGCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp CTGGTTTCCGTCTTACTGTCATCTGCATCGCTGTCCTaGTCACTGCCGCTGTCATTGACAAAGCATATCTGG +
Preference number: 6 (lower is better)
Translates to: LVSVLLSSASLS*SLPLSLTKHIW
Trigger: CCAGATATGCTTTGTCAATGACAGCGGCAGTGACAAGGACAGCGATGCAGATGACAGTAAGACGGAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp AGTCCATGTCATCCAGGGATTCAGACTCCTCCTCAGTaGTGTCTCTATCCGAATAGGAAGAACTCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: SPCHPGIQTPPQ*CLYPNRKNSAC
Trigger: GCAAGCAGAGTTCTTCCTATTCGGATAGAGACACAACTGAGGAGGAGTCTGAATCCCTGGATGACATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4
CDS CAA 72 bp TCTTCATTCAAACTTTCAATCTGGGAGTGGAGGTCATaGACGATCACTTGTAGCTGCCCGATAGTCATGTCT +
Preference number: 6 (lower is better)
Translates to: SSFKLSIWEWRS*TITCSCPIVMS
Trigger: AGACATGACTATCGGGCAGCTACAAGTGATCGTCAATGACCTCCACTCCCAGATTGAAAGTTTGAATGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182006.4