RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQGAP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028068

Ensembl transcript IDs: ENSMUST00000071812.11, ENSMUST00000194440.2, ENSMUST00000195465.2

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGAGGGACCTGGGCTGTAGGGGACAGCGACACCCATGGCTTATaGAGCGGAGTTGGGCAGACAGCCTGGCCCGGGCTTTGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: HRGTWAVGDSDTHGL*SGVGQTAWPGLWKP
Trigger: GGGCTTCCAAAGCCCGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCCCTACAGCCCAGGTCCCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 90 bp TCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTaGCTTGCCCTCCTTGATGGCCTGGTTGATAGCAGCCACACCAAG +
Preference number: 1 (lower is better)
Translates to: SEGHIGVPQHTLCLG*LALLDGLVDSSHTK
Trigger: CTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp ATCCCTCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTaGGCTGCCTTGCCCTCCTTGATGGCCTGGTTGATAGCAGCCACA +
Preference number: 1 (lower is better)
Translates to: IPRRATLGFLNTRSV*AALPSLMAWLIAAT
Trigger: TGTGGCTGCTATCAACCAGGCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 90 bp TCTTCACAACGGAGTCAACGTTCTTCTGGAAGTATCGCAGACGCCTaGGGTATCGCCTCCGTGCTGCCCACATTCGGGCCCAGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: SSQRSQRSSGSIADA*GIASVLPTFGPRPG
Trigger: TCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAACGTTGACTCCGTTGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp GTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTaGCGCTGCGCCTTCCAGGGCCTGCTGGTAGCTTTTAGCGCAGTC +
Preference number: 1 (lower is better)
Translates to: VMLNPEGCVPRALLL*RCAFQGLLVAFSAV
Trigger: GACTGCGCTAAAAGCTACCAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 90 bp GCCCTCCTTGATGGCCTGGTTGATAGCAGCCACACCAAGGGCTACTaGTGGGCGTCAGGAAAGAGAAGTCAGTCCTTCTGGGGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: ALLDGLVDSSHTKGY*WASGKRSQSFWGPS
Trigger: GGAAGGACCCCAGAAGGACTGACTTCTCTTTCCTGACGCCCATCAGTAGCCCTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp GTAACACAGCTGTCCACGGAGGCAGCAGCCAGGCAAGGGCTCCTGTaGAAGGCAGTTCTAAACTTGGGTATTCCCTGCCCAGCTGTGTGT +
Preference number: 1 (lower is better)
Translates to: VTQLSTEAAARQGLL*KAVLNLGIPCPAVC
Trigger: ACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTTCCACAGGAGCCCTTGCCTGGCTGCTGCCTCCGTGGACAGCTGTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp GTTCTTCTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTGCTaGCCACATTCGGGCCCAGGCCTGGATCTTGATTATAGCATCCAG +
Preference number: 1 (lower is better)
Translates to: VLLEVSQTPEVSPPC*PHSGPGLDLDYSIQ
Trigger: CTGGATGCTATAATCAAGATCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp GCTGGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGCAAACTTCTaGCGAACAAGGAAGCCACGAAGGCGGGCCTGGAGCTTGATGACA +
Preference number: 1 (lower is better)
Translates to: AGSKVLKTWEDSANF*RTRKPRRRAWSLMT
Trigger: TGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp GCTCCCAAGTCCCCTGAAAGGTCTGCAGATGAAGGTAGTAGGCGGTaGCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: APKSPERSADEGSRR*HPSCHVEPRRLCPQ
Trigger: CTGGGGACACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACCTTTCAGGGGACTTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp AACGTTCTTCTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTaGTGCCCACATTCGGGCCCAGGCCTGGATCTTGATTATAGCATC +
Preference number: 1 (lower is better)
Translates to: NVLLEVSQTPEVSPP*CPHSGPGLDLDYSI
Trigger: GATGCTATAATCAAGATCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp GACTCAGCAAACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTaGAGCTTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTGG +
Preference number: 1 (lower is better)
Translates to: DSANFWRTRKPRRRA*SLMTKPTLAFQSSW
Trigger: CCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 90 bp CCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTaGGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGCACC +
Preference number: 1 (lower is better)
Translates to: PSDPHKNHHKWGKEI*GVHSAVMDISKCCT
Trigger: GGTGCAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR TCA 90 bp TGTATAAAAACAAACAAACTGAGCAAGCCACGAGGAGCAAGCCAGTaGGCAGCATCCCTCCACGGACTCGGCCTCCAGGTTCCTGTCTTG +
Preference number: 1 (lower is better)
Translates to: CIKTNKLSKPRGASQ*AASLHGLGLQVPVL
Trigger: CAAGACAGGAACCTGGAGGCCGAGTCCGTGGAGGGATGCTGCTCACTGGCTTGCTCCTCGTGGCTTGCTCAGTTTGTTTGTTTTTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp ACTTGGGTATTCCCTGCCCAGCTGTGTGTTGGGAAGTCTATCTTATaGTCAAAGCACCCTCCTGCTCCAGTTCTGACCTGTCCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: TWVFPAQLCVGKSIL*SKHPPAPVLTCPCA
Trigger: AGCACAGGGACAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 90 bp CCTCCACGGACTCGGCCTCCAGGTTCCTGTCTTGAGTTCTTGCCCTaGCTTCCTTCAGTGATGGACTGTGATGTGATGCTGAATAAAACC +
Preference number: 1 (lower is better)
Translates to: PPRTRPPGSCLEFLP*LPSVMDCDVMLNKT
Trigger: GGTTTTATTCAGCATCACATCACAGTCCATCACTGAAGGAAGTCAGGGCAAGAACTCAAGACAGGAACCTGGAGGCCGAGTCCGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp CCAGCTGTGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTaGTCCAGTTCTGACCTGTCCCTGTGCTTGTTGGTCTCTACCAAC +
Preference number: 1 (lower is better)
Translates to: PAVCWEVYLMVKAPS*SSSDLSLCLLVSTN
Trigger: GTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 90 bp AGGCAAGGGCTCCTGTGGAAGGCAGTTCTAAACTTGGGTATTCCCTaGCCAGCTGTGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCC +
Preference number: 1 (lower is better)
Translates to: RQGLLWKAVLNLGIP*PAVCWEVYLMVKAP
Trigger: GGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTTCCACAGGAGCCCTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp AACATTTTATTAAGAGGAAATCTAGAGGGCAGTGAGGCAGGAAGATaGGAGATGTGGGGAGGACAGAGATGGCCAAGGCTGGCCTACAGG +
Preference number: 1 (lower is better)
Translates to: NILLRGNLEGSEAGR*EMWGGQRWPRLAYR
Trigger: CCTGTAGGCCAGCCTTGGCCATCTCTGTCCTCCCCACATCTCCCATCTTCCTGCCTCACTGCCCTCTAGATTTCCTCTTAATAAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 90 bp ACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTaGACTCAGCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAA +
Preference number: 1 (lower is better)
Translates to: THIRTTTSGERRFEV*TQLSWTSASAAPSQ
Trigger: TTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CCA 90 bp TGGAAGGCAGTTCTAAACTTGGGTATTCCCTGCCCAGCTGTGTGTTaGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCT +
Preference number: 1 (lower is better)
Translates to: WKAVLNLGIPCPAVC*EVYLMVKAPSCSSS
Trigger: AGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 90 bp GATGGCGTGCGTGCACTAACATCCTGTAGTCATCACGGGCTTTCCTaGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCAACGTTCT +
Preference number: 1 (lower is better)
Translates to: DGVRALTSCSHHGLS*LGKMLESSQRSQRS
Trigger: AGAACGTTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACTACAGGATGTTAGTGCACGCACGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp TCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCCTTGCCCGAGGAGCAAGCCAGTaGGCAGCATCCCTCCACGGA +
Preference number: 2 (lower is better)
Translates to: SEGHIGVPQHTLCLGCLARGASQ*AASLHG
Trigger: TCCGTGGAGGGATGCTGCTCACTGGCTTGCTCCTCG...GGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGCAGCAGCCAGTCAGCTaGGAGGCCTCAGTTCCGCCT +
Preference number: 2 (lower is better)
Translates to: TIPLGREGQALWPELWSSQQPVS*EASVPP
Trigger: AGGCGGAACTGAGGCCTCTCAGCTGACTGGCTGCTG...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 90 bp AGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCCTaGCCCTCCTTGATGGCCTGGTTGATAGCAGCCACACCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: RATLGFLNTRSVWAA*PSLMAWLIAATPRA
Trigger: AGCCCTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp GCCGCTCCTGGTAAGCCTTCCGTTGTCTATAACCCCGCCAGTGAGCCTGGATCTTTGCTTCTTTGCCGCTaGGCCTTCCAGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: AAPGKPSVVYNPASEPGSLLLCR*AFQGLL
Trigger: CAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAA...AGATCCAGGCTCACTGGCGGGGTTATAGACAACGGAAGGCTTACCAGGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 90 bp AGGAAGCCACGAAGGCGGGCCTGGAGCTTGATGACAAAGCCAACATaGGCCTTCCAGAGCAGTTGGCGGTCATGGGCAGCAGTGACCTTG +
Preference number: 2 (lower is better)
Translates to: RKPRRRAWSLMTKPT*AFQSSWRSWAAVTL
Trigger: CAAGGTCACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 90 bp GCAAACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTGGAGCTaGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCA +
Preference number: 2 (lower is better)
Translates to: ANFWRTRKPRRRAWS*MTKPTLAFQSSWRS
Trigger: TGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCAGCAGCCAGTCAGCTaGGAGGCCTCAGTTCCGCCT +
Preference number: 2 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVQQPVS*EASVPP
Trigger: AGGCGGAACTGAGGCCTCTCAGCTGACTGGCTGCTG...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 90 bp ATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATaGCTTCTTTGCCGCTGCGCCTTCCAGGGCCTGCTGGTAGCTTTT +
Preference number: 2 (lower is better)
Translates to: ILHVMLNPEGCVPRA*LLCRCAFQGLLVAF
Trigger: AAAAGCTACCAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 90 bp GGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTaGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGC +
Preference number: 2 (lower is better)
Translates to: GLQMKVVGGAILHVM*NPEGCVPRALLLCR
Trigger: GCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 90 bp CAGGTTCGCTTTAAAATGCTGCAGCCGCTCCTGGTAAGCCTTCCGTaGTCTATAACCCCGCCAGTGAGCCTGGATCTTGATGACGGCTGG +
Preference number: 2 (lower is better)
Translates to: QVRFKMLQPLLVSLP*SITPPVSLDLDDGW
Trigger: CCAGCCGTCATCAAGATCCAGGCTCACTGGCGGGGTTATAGACAACGGAAGGCTTACCAGGAGCGGCTGCAGCATTTTAAAGCGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGGATGATAGAGGTGGCTaGGGGGCACAGCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLDDRGG*GAQHRG
Trigger: CCCTCTGTGCTGTGCCCCTCAGCCACCTCTATCATC...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR TCA 90 bp GCCTGGAGCTTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCACTCCTGCTCCAGTTCTaGCCTGTCCCTGTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: AWSLMTKPTLAFQSSWRSLLLQF*PVPVLV
Trigger: AACAAGCACAGGGACAGGTCAGAACTGGAGCAGGAG...TGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp CCGCCAGTGAGCCTGGATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTGTCCTTCATGTCATGTTaGACCCAGAAGGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PPVSLDLDDGWKQGPEDVSFMSC*TQKAVS
Trigger: GGACACAGCCTTCTGGGTTCAACATGACATGAAGGA...CACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCAGGCTCACTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp GTGGGAAGACTCAGCAAACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTGTCTGACCTGTCCCTGTaGTTGTTGGTCTCTACCAAC +
Preference number: 2 (lower is better)
Translates to: VGRLSKLLANKEATKAGLSDLSL*LLVSTN
Trigger: GTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGA...CAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp CCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCGAGGTATCGCCTCCGTaGTGCCCACATTCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PIQLRSPPDSGSRGERIFEVSPP*CPHSGP
Trigger: TGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTC...GAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACAGCGACACAAAACCATaGTTCTTTGCAGGACTGAGT +
Preference number: 2 (lower is better)
Translates to: REIRLLGSARTTGGHRGDSDTKP*FFAGLS
Trigger: ACTCAGTCCTGCAAAGAACCATGGTTTTGTGTCGCT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 90 bp GAGGCAGCAGCCAGGCAAGGGCTCCTGTGGAAGGCAGTTCTAAACTaGGGTATTCCCTGCCCAGCTGTGTGTTGGGAAGTCTATCTTATG +
Preference number: 2 (lower is better)
Translates to: EAAARQGLLWKAVLN*GIPCPAVCWEVYLM
Trigger: CATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTTCCACAGGAGCCCTTGCCTGGCTGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp CCCAAGTCCCCTGAAAGGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCATCCAGGTTCCTGTCTTaGGTTCTTGCCCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: PKSPERSADEGSRRCHPSSRFLS*VLALTS
Trigger: GGAAGTCAGGGCAAGAACTCAAGACAGGAACCTGGA...TGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACCTTTCAGGGGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp TCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGGTCAAAGCACCCTCCTaGTCCAGTTCTGACCTGTCC +
Preference number: 2 (lower is better)
Translates to: SCHVEPRRLCPQGIASLPVKAPS*SSSDLS
Trigger: GGACAGGTCAGAACTGGAGCAGGAGGGTGCTTTGAC...CGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp GGAGCTTTAGCAACTCCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAACGCTCTGTCTGGGCTaGCTTGCCCTCCTTGATGGC +
Preference number: 2 (lower is better)
Translates to: GALATPIQLRSPPDSGSRTLCLG*LALLDG
Trigger: GCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGT...TCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGGAGTTGCTAAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp AGCTGCTGGTTAGAGCGGATCTTCCTAACCACTTCCTCTTGGAGCTTTAGCAACAGGGCATTGCTTCTTTaGCGCTGCGCCTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SCWLERIFLTTSSWSFSNRALLL*RCAFQG
Trigger: GCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCT...GTTGCTAAAGCTCCAAGAGGAAGTGGTTAGGAAGATCCGCTCTAACCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGAGGGTCAAGCATTGTaGCCCGAGCTCTGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVEGQAL*PELWSS
Trigger: CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR CCA 90 bp CGGGCCCAGGCCTGGATCTTGATTATAGCATCCAGGTTCGCTTTAAAATGCTGCAACACACGCTCTGTCTaGGCTGCCTTGCCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RAQAWILIIASRFALKCCNTRSV*AALPSL
Trigger: CAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTT...GCAGCATTTTAAAGCGAACCTGGATGCTATAATCAAGATCCAGGCCTGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCTTTGCAGGACTGAGTaGAGGCTCCTGGTTCCCGGG +
Preference number: 2 (lower is better)
Translates to: NTPVTHIRTTTSGERRFELCRTE*RLLVPG
Trigger: CCCGGGAACCAGGAGCCTGCACTCAGTCCTGCAAAG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR CCA 90 bp CCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCAGCAGTTGGCGGTCATaGGCAGCAGTGACCTTGGTG +
Preference number: 2 (lower is better)
Translates to: PIQLRSPPDSGSRGERIFSSWRS*AAVTLV
Trigger: CACCAAGGTCACTGCTGCCCATGACCGCCAACTGCT...GAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp CATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCAACACACAAAACCACCATaGCTGATGGGGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: HHGLSWLGKMLESSQRSQHTKPP*LMGEMG
Trigger: CCCCATCTCCCCCATCAGCCATGGTGGTTTTGTGTG...TTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTCTTGAGTTCTTGCCCTaGCTTCCTTCAGTGATGGAC +
Preference number: 2 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCLEFLP*LPSVMD
Trigger: GTCCATCACTGAAGGAAGTCAGGGCAAGAACTCAAG...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATAAAACCATGGTTCTTTaGAGGACTGAGTGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDKTMVL*RTECRL
Trigger: GAGCCTGCACTCAGTCCTGCAAAGAACCATGGTTTT...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR GCA 90 bp GGAGCTTTAGCAACTCCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAAACTTGGGTATTCCCTaGCCAGCTGTGTGTTGGGAA +
Preference number: 2 (lower is better)
Translates to: GALATPIQLRSPPDSGSRNLGIP*PAVCWE
Trigger: TTCCCAACACACAGCTGGGCAGGGAATACCCAAGTT...TCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGGAGTTGCTAAAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp GGAGCTTTAGCAACTCCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGACTCAGCAAACTTCTaGCGAACAAGGAAGCCACGA +
Preference number: 2 (lower is better)
Translates to: GALATPIQLRSPPDSGSRDSANF*RTRKPR
Trigger: TCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTC...TCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGGAGTTGCTAAAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGGGAAGTCTATCTTATaGTCAAAGCACCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCGKSIL*SKHPPA
Trigger: AGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCC...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAAAAACCATGGTTCTTTaGAGGACTGAGTGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSKTMVL*RTECRL
Trigger: GAGCCTGCACTCAGTCCTGCAAAGAACCATGGTTTT...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR GCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGATGGACATCAGCAAGTaGTGCACCAAGTCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEMDISK*CTKSRL
Trigger: TAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCAT...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR CCA 90 bp CATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCAATGCCCAGCTGTGTGTTaGGAAGTCTATCTTATGGTC +
Preference number: 2 (lower is better)
Translates to: HHGLSWLGKMLESSQRSQCPAVC*EVYLMV
Trigger: GACCATAAGATAGACTTCCCAACACACAGCTGGGCA...TTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR TCA 90 bp TCCCTGCCCAGCTGTGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGTTCTTGATTAACAATTaGTGTGGAAACCCACTGATG +
Preference number: 2 (lower is better)
Translates to: SLPSCVLGSLSYGQSTLLFLINN*CGNPLM
Trigger: CATCAGTGGGTTTCCACATCAATTGTTAATCAAGAA...CAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAAGCGACACAAAACCATaGTTCTTTGCAGGACTGAGT +
Preference number: 2 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSSDTKP*FFAGLS
Trigger: ACTCAGTCCTGCAAAGAACCATGGTTTTGTGTCGCT...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR TCA 90 bp AGTCATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCTGCGGGGCATTTCTTaGTTAACAATTGATGTGGAA +
Preference number: 2 (lower is better)
Translates to: SHHGLSWLGKMLESSQRSLRGIS*LTIDVE
Trigger: TTCCACATCAATTGTTAATCAAGAAATGCCCCGCAG...ACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp CGGAGTCAACGTTCTTCTGGAAGTATCGCAGACGCCTaGGGTATCGCCTCCGTGCTGCCCACATTCGGGCCC +
Preference number: 3 (lower is better)
Translates to: RSQRSSGSIADA*GIASVLPTFGP
Trigger: GGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAACGTTGACTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp GAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGCTaGGCCTTCCAGGGCCTGCTGGTAGCTTTTAGCGCA +
Preference number: 3 (lower is better)
Translates to: EGCVPRALLLCR*AFQGLLVAFSA
Trigger: TGCGCTAAAAGCTACCAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp CTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTaGTGCCCACATTCGGGCCCAGGCCTGGATCTTGAT +
Preference number: 3 (lower is better)
Translates to: LEVSQTPEVSPP*CPHSGPGLDLD
Trigger: ATCAAGATCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp ACCAAGTCAAGGCTAGGACAGGATGATAGAGGTGGCTaGGGGGCACAGCACAGAGGGACCTGGGCTGTAGGG +
Preference number: 3 (lower is better)
Translates to: TKSRLGQDDRGG*GAQHRGTWAVG
Trigger: CCCTACAGCCCAGGTCCCTCTGTGCTGTGCCCCTCAGCCACCTCTATCATCCTGTCCTAGCCTTGACTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 72 bp AACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTaGCGCTGCGCCTTCCAGGGCCTGCTGGTAGCTTTT +
Preference number: 3 (lower is better)
Translates to: NPEGCVPRALLL*RCAFQGLLVAF
Trigger: AAAAGCTACCAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CAA 90 bp CCTGAGGTATCGCCTCCGTGCTGCCCACATTCGGGCCCAGGCCTGGATCTTGATCTGTCCCTGTGCTTGTaGGTCTCTACCAACTTGACA +
Preference number: 3 (lower is better)
Translates to: PEVSPPCCPHSGPGLDLDLSLCL*VSTNLT
Trigger: TGTCAAGTTGGTAGAGACCAACAAGCACAGGGACAG...ATCAAGATCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CAA 90 bp TCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCCTTGCCAAGGCAGTTCTAAACTaGGGTATTCCCTGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: SEGHIGVPQHTLCLGCLAKAVLN*GIPCPA
Trigger: AGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTT...GGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp ACAAACAAACTGAGCAAGCCACGAGGAGCAAGCCAGTaGGCAGCATCCCTCCACGGACTCGGCCTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: TNKLSKPRGASQ*AASLHGLGLQV
Trigger: AACCTGGAGGCCGAGTCCGTGGAGGGATGCTGCTCACTGGCTTGCTCCTCGTGGCTTGCTCAGTTTGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp CACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTaGCTTGCCCTCCTTGATGGCCTGGTTGATAGCAGC +
Preference number: 3 (lower is better)
Translates to: HIGVPQHTLCLG*LALLDGLVDSS
Trigger: GCTGCTATCAACCAGGCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp GAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTGCTaGCCACATTCGGGCCCAGGCCTGGATCTTGATTAT +
Preference number: 3 (lower is better)
Translates to: EVSQTPEVSPPC*PHSGPGLDLDY
Trigger: ATAATCAAGATCCAGGCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp AGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTaGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: RTIPLGREGQAL*PELWSSEKRAG
Trigger: CCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CCA 72 bp AAGGTCCTGAAGACGTGGGAAGACTCAGCAAACTTCTaGCGAACAAGGAAGCCACGAAGGCGGGCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: KVLKTWEDSANF*RTRKPRRRAWS
Trigger: GCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCACGTCTTCAGGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp CTGACTGAATCTCCTCCCAGGTTAGATGGGAGGTATTaGGGTGGCAGCCGGAAGGATGCTCCCAAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: LTESPPRLDGRY*GGSRKDAPKSP
Trigger: AGGGGACTTGGGAGCATCCTTCCGGCTGCCACCTCAATACCTCCCATCTAACCTGGGAGGAGATTCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp ATAACCCCGCCAGTGAGCCTGGATCTTGATGACGGCTaGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGC +
Preference number: 3 (lower is better)
Translates to: ITPPVSLDLDDG*KQGPEDVGRLS
Trigger: GCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCAGGCTCACTGGCGGGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp GATGGCCTGGTTGATAGCAGCCACACCAAGGGCTACTaGTGGGCGTCAGGAAAGAGAAGTCAGTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DGLVDSSHTKGY*WASGKRSQSFW
Trigger: CCAGAAGGACTGACTTCTCTTTCCTGACGCCCATCAGTAGCCCTTGGTGTGGCTGCTATCAACCAGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp AACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTaGAGCTTGATGACAAAGCCAACATTGGCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: NFWRTRKPRRRA*SLMTKPTLAFQ
Trigger: CTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp GCAGTAGCGACACAAAACCATGGTTCTTTGCAGGACTaGGTGCAGGCTCCTGGTTCCCGGGGATGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: AVATQNHGSLQD*VQAPGSRGCGK
Trigger: TTTACCACATCCCCGGGAACCAGGAGCCTGCACTCAGTCCTGCAAAGAACCATGGTTTTGTGTCGCTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR-3UTR CAA 90 bp TCTATAACCCCGCCAGTGAGCCTGGATCTTGATGACGGCTGGAAGCAAGGTCCTATGACAAAGCCAACATaGGCCTTCCAGAGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: SITPPVSLDLDDGWKQGPMTKPT*AFQSSW
Trigger: CCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCAT...AGGACCTTGCTTCCAGCCGTCATCAAGATCCAGGCTCACTGGCGGGGTTATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp ACTCGGCCTCCAGGTTCCTGTCTTGAGTTCTTGCCCTaGCTTCCTTCAGTGATGGACTGTGATGTGATGCTG +
Preference number: 3 (lower is better)
Translates to: TRPPGSCLEFLP*LPSVMDCDVML
Trigger: CAGCATCACATCACAGTCCATCACTGAAGGAAGTCAGGGCAAGAACTCAAGACAGGAACCTGGAGGCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp GGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTaGACCAAGTCAAGGCTAGGACAGGATGATAGAGGT +
Preference number: 3 (lower is better)
Translates to: GVHSAVMDISKC*TKSRLGQDDRG
Trigger: ACCTCTATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 72 bp TCCCCTGAAAGGTCTGCAGATGAAGGTAGTAGGCGGTaGCATCCTTCATGTCATGTTGAACCCAGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: SPERSADEGSRR*HPSCHVEPRRL
Trigger: CAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACCTTTCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp TTCCCTGCCCAGCTGTGTGTTGGGAAGTCTATCTTATaGTCAAAGCACCCTCCTGCTCCAGTTCTGACCTGT +
Preference number: 3 (lower is better)
Translates to: FPAQLCVGKSIL*SKHPPAPVLTC
Trigger: ACAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp TTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTaGCGGTCATGGGCAGCAGTGACCTTGGTGATGACT +
Preference number: 3 (lower is better)
Translates to: LMTKPTLAFQSS*RSWAAVTLVMT
Trigger: AGTCATCACCAAGGTCACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CAA 90 bp CAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCGGACTATCCTTGATGGCCTGGTaGATAGCAGCCACACCAAGG +
Preference number: 3 (lower is better)
Translates to: QLRSPPDSGSRGERIFGLSLMAW*IAATPR
Trigger: CCTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGA...TAGTCCGAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CAA 90 bp AGCTGCTGGTTAGAGCGGATCTTCCTAACCACTTCCTCTTGGAGCTTTAGCAACCCTGTCCTCCCCATGTaGCCTTTAGCCATGGTGTTT +
Preference number: 3 (lower is better)
Translates to: SCWLERIFLTTSSWSFSNPVLPM*PLAMVF
Trigger: AAACACCATGGCTAAAGGCAACATGGGGAGGACAGG...GTTGCTAAAGCTCCAAGAGGAAGTGGTTAGGAAGATCCGCTCTAACCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR-3UTR CAA 90 bp CATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCAAGTTAGATGGGAGGTATaGAGGTGGCAGCCGGAAGGA +
Preference number: 3 (lower is better)
Translates to: HHGLSWLGKMLESSQRSQVRWEV*RWQPEG
Trigger: TCCTTCCGGCTGCCACCTCAATACCTCCCATCTAAC...TTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp AGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTaGACTCAGCTGTCATGGACATCAGCAAGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: RTTTSGERRFEV*TQLSWTSASAA
Trigger: TGCAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 72 bp AAAGCACCCTCCTGCTCCAGTTCTGACCTGTCCCTGTaGTTGTTGGTCTCTACCAACTTGACACAAATCCAG +
Preference number: 3 (lower is better)
Translates to: KAPSCSSSDLSL*LLVSTNLTQIQ
Trigger: CTGGATTTGTGTCAAGTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGAACTGGAGCAGGAGGGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp ATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTaGGAAGACTCAGCAAACTTCTGGCGAACAAGGAAG +
Preference number: 3 (lower is better)
Translates to: ILMTAGSKVLKT*EDSANFWRTRK
Trigger: CTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp CCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTaGGGTGTGCACTCAGCTGTCATGGACATCAGCAAG +
Preference number: 3 (lower is better)
Translates to: PHKNHHKWGKEI*GVHSAVMDISK
Trigger: CTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR TCA 72 bp CTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTaGCCTGTCCCTGTGCTTGTTGGTCTCTACCAACTT +
Preference number: 3 (lower is better)
Translates to: LSYGQSTLLLQF*PVPVLVGLYQL
Trigger: AAGTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR GCA 72 bp CTCCTGTGGAAGGCAGTTCTAAACTTGGGTATTCCCTaGCCAGCTGTGTGTTGGGAAGTCTATCTTATGGTC +
Preference number: 3 (lower is better)
Translates to: LLWKAVLNLGIP*PAVCWEVYLMV
Trigger: GACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACTGCCTTCCACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp GTTCTAAACTTGGGTATTCCCTGCCCAGCTGTGTGTTaGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: VLNLGIPCPAVC*EVYLMVKAPSC
Trigger: GCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp TGCTGGTTAGAGCGGATCTTCCTAACCACTTCCTCTTaGAGCTTTAGCAACTCCGATTCAGCTGAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: CWLERIFLTTSS*SFSNSDSAEKS
Trigger: GGACTTCTCAGCTGAATCGGAGTTGCTAAAGCTCCAAGAGGAAGTGGTTAGGAAGATCCGCTCTAACCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp AGGTCTATGAGAACCACCTGGAAGTCAGCTCTGAGGTaGCGAGAAGATGGCAAGACAAGAACTCTGAGTTCA +
Preference number: 3 (lower is better)
Translates to: RSMRTTWKSALR*REDGKTRTLSS
Trigger: TGAACTCAGAGTTCTTGTCTTGCCATCTTCTCGTCACCTCAGAGCTGACTTCCAGGTGGTTCTCATAGACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR GCA 72 bp CCTGTAGTCATCACGGGCTTTCCTGGCTCGGAAAAATaGTTGAATCTTCACAACGGAGTCAACGTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: PVVITGFPGSEK*LNLHNGVNVLL
Trigger: CAGAAGAACGTTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CCA 72 bp CGTGCACTAACATCCTGTAGTCATCACGGGCTTTCCTaGCTCGGAAAAATGCTTGAATCTTCACAACGGAGT +
Preference number: 3 (lower is better)
Translates to: RALTSCSHHGLS*LGKMLESSQRS
Trigger: ACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACTACAGGATGTTAGTGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR TCA 72 bp CTGACCTGTCCCTGTGCTTGTTGGTCTCTACCAACTTaGCACAAATCCAGATATATCTGGGAAGATATATCT +
Preference number: 3 (lower is better)
Translates to: LTCPCACWSLPT*HKSRYIWEDIS
Trigger: AGATATATCTTCCCAGATATATCTGGATTTGTGTCAAGTTGGTAGAGACCAACAAGCACAGGGACAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACCAGCGCATGGCGCTGTaGGGCGGCCAGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDQRMAL*GGQGAA
Trigger: GGCAGCACCCTGGCCGCCCCACAGCGCCATGCGCTG...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACGCGCTCCTCTGGCTCTaGTACCCGGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDALLWL*YPAGSA
Trigger: TGCAGAGCCTGCCGGGTACCAGAGCCAGAGGAGCGC...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp TCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCCTTGCCGGGCTTCAGGGCACATaGGCTCCTTCACGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SEGHIGVPQHTLCLGCLAGLQGT*APSRCQ
Trigger: CTGACACCGTGAAGGAGCTCATGTGCCCTGAAGCCC...GGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGCCTGGACCTGTTCATTaGCCTGGCTCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPPGPVH*PGSQQP
Trigger: AGGCTGCTGTGAGCCAGGTCAATGAACAGGTCCAGG...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCAGCGTGCTGTAGGAGCTaGGCCACGGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPACCRS*ATAPSA
Trigger: TGCGCTGGGAGCCGTGGCTCAGCTCCTACAGCACGC...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACAGCTCCCCCTGTTGCTaGTTCTGGAGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDSSPCC*FWRRAS
Trigger: GCTGGCTCTCCTCCAGAAGCAGCAACAGGGGGAGCT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACCCTCCATCCAACGCTTaGCTTCCTCCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDPPSNA*LPPAGR
Trigger: TCTGCCGGCTGGAGGAAGCCAAGCGTTGGATGGAGG...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGAGGTTGATGTGGCCCTaGATCTCTGCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPRLMWP*ISAWVR
Trigger: CCTCACCCAGGCAGAGATCCAGGGCCACATCAACCT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGCAGAACTCTTGGGTTTaGGGGCCAGGTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPQNSWV*GPGGQG
Trigger: GCCTTGACCACCTGGCCCCCAAACCCAAGAGTTCTG...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGCCCCCGATCTTGCTaGAGGCCGGTAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELCPRSC*RPVTGG
Trigger: GCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCA...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGCGTGCTGTAGGAGCTaGGCCACGGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCACCRS*ATAPSA
Trigger: TGCGCTGGGAGCCGTGGCTCAGCTCCTACAGCACGC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACCCCTGTTGCTGCTTCTaGAGGAGAGCCAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDPCCCF*RRASSC
Trigger: GCAAGAGCTGGCTCTCCTCCAGAAGCAGCAACAGGG...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGAGGCCTCCCGACGGTTaGAGGCATAGTTGTACAGAC +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPRPPDG*RHSCTD
Trigger: GTCTGTACAACTATGCCTCCAACCGTCGGGAGGCCT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCAGGGACTCCCCAGGGTaGAACTGGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELRDSPG*NWMRSA
Trigger: GGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp GAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTaGCCGCTGCGCCTTCCAGGGCCTGCTGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: EPRRLCPQGIAS*PLRLPGPAGSF
Trigger: AAAGCTACCAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 72 bp GTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATaGCTTCTTTGCCGCTGCGCCTTCCAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VMLNPEGCVPRA*LLCRCAFQGLL
Trigger: CAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACGTGCAACATGAAGGCTaGCATCTTCCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDVQHEG*HLPGQL
Trigger: CAGCTGGCCTGGAAGATGTCAGCCTTCATGTTGCAC...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTGCAGTGGGTCTTGGTaGCCTGGGGCCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQCSGSW*PGASWS
Trigger: AGACCAGCTGGCCCCAGGTCACCAAGACCCACTGCA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATGCAGTGGGTCTTGGTaGCCTGGGGCCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPCSGSW*PGASWS
Trigger: AGACCAGCTGGCCCCAGGTCACCAAGACCCACTGCA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGGATGGCCAGAATAGCTaGATGGACTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPDGQNS*MDCSLI
Trigger: GATGAGGCTGCAGTCCATGCAGCTATTCTGGCCATC...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GTGGGAAGACTCAGCAAACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTGAGCTCCCCCTGTTGCTaGTTCTGGAGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGRLSKLLANKEATKAGLSSPCC*FWRRAS
Trigger: GCTGGCTCTCCTCCAGAAGCAGCAACAGGGGGAGCT...CAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCACGCTCTGTCTGGGCTaGCTTGCCCTCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELTLCLG*LALLDG
Trigger: GCCATCAAGGAGGGCAAGGCAGCCCAGACAGAGCGT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGTATCGCCTCCGTGCTaGCCACATTCGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCVSPPC*PHSGPG
Trigger: GCCTGGGCCCGAATGTGGGCAGCACGGAGGCGATAC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTTGCCAAGGATCTCCTaGAGAGCGCTCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELLPRIS*RALCPR
Trigger: GCGGGGACAGAGCGCTCTGCAGGAGATCCTTGGCAA...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACGTCAGCTTCTTGCAGTaGGAGACTACCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDVSFLQ*ETTSCR
Trigger: CCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGAC...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACAGGAGCGACCACAGCTaGGTTCAGGAAGCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDRSDHS*VQEAVV
Trigger: TACTACCGCTTCCTGAACCCAGCTGTGGTCGCTCCT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGCGCTCCTCTGGCTCTaGTACCCGGCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCALLWL*YPAGSA
Trigger: TGCAGAGCCTGCCGGGTACCAGAGCCAGAGGAGCGC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGTGTACACCATGGGTTTaGCCACAGCCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPCTPWV*PQPPCL
Trigger: CAGACATGGTGGCTGTGGCCAAACCCATGGTGTACA...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCAGGTTTGGGGGCCAGGTaGTCAAGGCAGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPGLGAR*SRQAWM
Trigger: CATCCAGGCCTGCCTTGACCACCTGGCCCCCAAACC...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp TTAGCGCAGTCAGGAACTATCCCTCGGAGGGCCACATaGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAQSGTIPRRAT*GFLNTRSVWAA
Trigger: GGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGAGGGATAGTTCCTGACTGCGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 72 bp CGAAGGCGGGCCTGGAGCTTGATGACAAAGCCAACATaGGCCTTCCAGAGCAGTTGGCGGTCATGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RRRAWSLMTKPT*AFQSSWRSWAA
Trigger: TGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGAGCCTGCTCAGGGGTaGCGTCATAGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCEPAQG*RHRGDG
Trigger: GCCATCTCCCCTATGACGTCACCCCTGAGCAGGCTC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GCCGCTCCTGGTAAGCCTTCCGTTGTCTATAACCCCGCCAGTGAGCCTGGATCTCGCTGCTTACTTCTCTaGGCCGTGCTTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AAPGKPSVVYNPASEPGSRCLLL*AVLVSS
Trigger: CGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCG...AGATCCAGGCTCACTGGCGGGGTTATAGACAACGGAAGGCTTACCAGGAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGGTGGCCCTGGATCTCTaGCTGGGTGAGGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQVALDL*LGEAGF
Trigger: GAATCCTGCCTCACCCAGGCAGAGATCCAGGGCCAC...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GGAGGCAGCAGCCAGGCAAGGGCTCCTGTGGAAGGCAGTTCTAAACTTGGGTATGTGGCCCTGGATCTCTaGCTGGGTGAGGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: GGSSQARAPVEGSSKLGYVALDL*LGEAGF
Trigger: GAATCCTGCCTCACCCAGGCAGAGATCCAGGGCCAC...ATACCCAAGTTTAGAACTGCCTTCCACAGGAGCCCTTGCCTGGCTGCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGTCTGTCCCCGCCCATTaGGGTAGAACCTCACCACCA +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSSVPAH*GRTSPP
Trigger: TGGTGGTGAGGTTCTACCGCAATGGGCGGGGACAGA...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGCGATGGGCTTCTTCATaGTCTCTGGGAGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSRWASS*SLGAEE
Trigger: CTCCTCGGCTCCCAGAGAGCATGAAGAAGCCCATCG...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGGAAGGCAGACCGATGTaGGCTACCGCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSEGRPM*ATAESQ
Trigger: TTGGCTCTCTGCGGTAGCCCACATCGGTCTGCCTTC...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCCCGCCTTCTCCATCTTaGCTAGGGCCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELPPSPS*LGPAAL
Trigger: AAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGG...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCATGGGCAGCAGTGACCTTGGTTGCTTGTGTCCTCGTTaGCTCTGGCCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ANIGLPEQLAVMGSSDLGCLCPR*LWPLLG
Trigger: GCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCA...ACCAAGGTCACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCAACACACGCTCTGTCTaGGCTGCCTTGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELNTRSV*AALPSL
Trigger: CAAGGAGGGCAAGGCAGCCCAGACAGAGCGTGTGTT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCAGCGCATGGCGCTGTaGGGCGGCCAGGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEQRMAL*GGQGAA
Trigger: GGCAGCACCCTGGCCGCCCCACAGCGCCATGCGCTG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTCCCCAGAGAAGATCTaGCCAGCAGCAGCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELSPEKI*PAAACC
Trigger: ACAGCACGCTGCTGCTGGCCAGATCTTCTCTGGGGA...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTAGGGACTCCCCAGGGTaGAACTGGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCRDSPG*NWMRSA
Trigger: GGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCT...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GTGGGAAGACTCAGCAAACTTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTGTCCGGATGGCTTTGTTaGTCCTCCACACAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGRLSKLLANKEATKAGLSGWLC*SSTQPG
Trigger: TCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGA...CAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTCTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp TTCTTCTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTGCTGCCCACATTAAGGCCCCAGGGTTCTaGCTCTCCAGAGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: FFWKYRRRLRYRLRAAHIKAPGF*LSRASS
Trigger: TGACGACGCTCTGGAGAGGCAGAACCCTGGGGCCTT...AATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATGGCTCACAGCAGCCTaGAGGTCATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPWLTAA*RSFQLR
Trigger: CCTGAGCTGGAATGACCTGCAGGCTGCTGTGAGCCA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTTGCTTCTTTGCCGCTaGGCCTTCCAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCLLLCR*AFQGLL
Trigger: CAGCAGGCCCTGGAAGGCGCAGCGGCAAAGAAGCAA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TTCTTCTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTGCTGCCCACATTCCTCCATCCAACGCTTaGCTTCCTCCAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: FFWKYRRRLRYRLRAAHIPPSNA*LPPAGR
Trigger: TCTGCCGGCTGGAGGAAGCCAAGCGTTGGATGGAGG...AATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACACTGGAGGCCATATTTaGCCAGTTCAGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDTGGHI*PVQRRC
Trigger: ACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATGCTTGTGTCCTCGTTaGCTCTGGCCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPCLCPR*LWPLLG
Trigger: GCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCACTCGGAGGGCCACATTaGGGTTCCTCAACACACGCT +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPLGGPH*GSSTHA
Trigger: AGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGAG...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGCCTGTCACCACATCCTaGGGCTGTTCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSPVTTS*GCSTFD
Trigger: GTCAAAGGTGGAACAGCCCCAGGATGTGGTGACAGG...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGAACTCTTGGGTTTaGGGGCCAGGTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQQNSWV*GPGGQG
Trigger: GCCTTGACCACCTGGCCCCCAAACCCAAGAGTTCTG...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGTTAGATGGGAGGTATTaGGGTGGCAGCCGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSLDGRY*GGSRKD
Trigger: ATCCTTCCGGCTGCCACCTCAATACCTCCCATCTAA...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCCTAGCACATCCTGGATaGCCTTGCCAAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELLAHPG*PCQGSP
Trigger: AGGAGATCCTTGGCAAGGTCATCCAGGATGTGCTAG...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGCCTGGCTCGGAAAAATaGTTGAATCTTCACAACGGA +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPPGSEK*LNLHNG
Trigger: TCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGG...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCAAGGTCCTGCTCCAGCTaGTGGTTAGAGCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPRSCSS*WLERIF
Trigger: GAAGATCCGCTCTAACCAGCAGCTGGAGCAGGACCT...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGATGTCTAATCGTCTCTaGACTTCAGAGTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPMSNRL*TSEWLR
Trigger: TCTGAGCCACTCTGAAGTGCAGAGACGATTAGACAT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGGATGTCTGTGGTCTCTaGGAGGAAGATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSDVCGL*EEDRRQ
Trigger: CTGCCTTCGATCTTCCTCCCAGAGACCACAGACATC...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TCTATAACCCCGCCAGTGAGCCTGGATCTTGATGACGGCTGGAAGCAAGGTCCTTGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: SITPPVSLDLDDGWKQGPCPRWL*PLLGGS
Trigger: AGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACA...AGGACCTTGCTTCCAGCCGTCATCAAGATCCAGGCTCACTGGCGGGGTTATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTAGCAGTTGGCGGTCATaGGCAGCAGTGACCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCSSWRS*AAVTLV
Trigger: CACCAAGGTCACTGCTGCCCATGACCGCCAACTGCT...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGGCTTGGCCAAATAGATaGGCTGAGTCTGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSAWPNR*AESAAG
Trigger: ACCTGCTGCAGACTCAGCCCATCTATTTGGCCAAGC...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGTCTGAAAGATCAGCTTaGCCAAATAGATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GTATPMAYEAELGRQPGPSERSA*PNRWAE
Trigger: CTCAGCCCATCTATTTGGCCAAGCTGATCTTTCAGA...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGTACACCATGGGTTTaGCCACAGCCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELCTPWV*PQPPCL
Trigger: CAGACATGGTGGCTGTGGCCAAACCCATGGTGTACA...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGGGTTTGGGGGCCAGGTaGTCAAGGCAGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLGLGAR*SRQAWM
Trigger: CATCCAGGCCTGCCTTGACCACCTGGCCCCCAAACC...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp CAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCGGACTATGCCCCCGATCTTGCTaGAGGCCGGTAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QLRSPPDSGSRGERIFGLCPRSC*RPVTGG
Trigger: GCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCA...TAGTCCGAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATGGGCTTCAGGGCACATaGGCTCCTTCACGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDGLQGT*APSRCQ
Trigger: CTGACACCGTGAAGGAGCTCATGTGCCCTGAAGCCC...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp TTCTGGCGAACAAGGAAGCCACGAAGGCGGGCCTGGAGCTTGATGACAAAGCCATACCGAGGTGCAACATaGAGGCTGACATCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FWRTRKPRRRAWSLMTKPYRGAT*RLTSSR
Trigger: CCTGGAAGATGTCAGCCTTCATGTTGCACCTCGGTA...TGGCTTTGTCATCAAGCTCCAGGCCCGCCTTCGTGGCTTCCTTGTTCGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCTAGCACATCCTGGATaGCCTTGCCAAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQLAHPG*PCQGSP
Trigger: AGGAGATCCTTGGCAAGGTCATCCAGGATGTGCTAG...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGGGGCCTCCTCCTGGTTaGTCCAGCTCTTATAGATGT +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQGPPPG*SSSYRC
Trigger: ACATCTATAAGAGCTGGATCAACCAGGAGGAGGCCC...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCTATGTTGTCCCCAATaGGGTCAGAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQLCCPQ*GQRWWV
Trigger: CACCCACCATCTCTGACCTCATTGGGGACAACATAG...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGAAGGCCCCAGGGTTCTaGCTCTCCAGAGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLKAPGF*LSRASS
Trigger: TGACGACGCTCTGGAGAGGCAGAACCCTGGGGCCTT...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp TGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCTGCCCAGCTCCCCCTGTTaGTGCTTCTGGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CWEVYLMVKAPSCSSSDLPSSPC*CFWRRA
Trigger: GGCTCTCCTCCAGAAGCAGCAACAGGGGGAGCTGGG...CAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACATGTCTAATCGTCTCTaGACTTCAGAGTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDMSNRL*TSEWLR
Trigger: TCTGAGCCACTCTGAAGTGCAGAGACGATTAGACAT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp TCCCTGCCCAGCTGTGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGGAAGGCAGACCGATGTaGGCTACCGCAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SLPSCVLGSLSYGQSTLLEGRPM*ATAESQ
Trigger: TTGGCTCTCTGCGGTAGCCCACATCGGTCTGCCTTC...CAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCATGATTCCTGGCATTaGCCGCCTTCTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQHDSWH*PPSPSW
Trigger: CCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATG...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCATCGTCATGATTCCTaGCATTGGCCGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQHRHDS*HWPPSP
Trigger: TGGAGAAGGCGGCCAATGCCAGGAATCATGACGATG...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGCCCTGTTGCTGCTTCTaGAGGAGAGCCAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SCHVEPRRLCPQGIASLPPCCCF*RRASSC
Trigger: GCAAGAGCTGGCTCTCCTCCAGAAGCAGCAACAGGG...CGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCGATCTTGATGACGGCTaGAAGCAAGGTCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELDLDDG*KQGPED
Trigger: GTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATC...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTCCTGCTCCAGCTGCTaGTTAGAGCGGATCTTCCTA +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQSCSSC*LERIFL
Trigger: TAGGAAGATCCGCTCTAACCAGCAGCTGGAGCAGGA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTGGGTCTTGGTGACCTaGGGCCAGCTGGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVWVLVT*GQLVLV
Trigger: CACCAAGACCAGCTGGCCCCAGGTCACCAAGACCCA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGTGGGTCTTGGTGACCTaGGGCCAGCTGGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLWVLVT*GQLVLV
Trigger: CACCAAGACCAGCTGGCCCCAGGTCACCAAGACCCA...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp AGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATaGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRTIPLGREGQA*WPELWSSEKRA
Trigger: AGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGCCATTTCCTCAGCTGTaGGGCGCTCATAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLPFPQL*GAHRLS
Trigger: GGACAGCCTATGAGCGCCTCACAGCTGAGGAAATGG...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCACCATTTCCTCAGCTGTaGGGCGCTCATAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLQMKVVGGAILHVMLNPPFPQL*GAHRLS
Trigger: GGACAGCCTATGAGCGCCTCACAGCTGAGGAAATGG...TGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTGGGATTCTGCAAGGTaGCCAGAGTGTCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCWDSAR*PECPLP
Trigger: TGGTAGAGGACACTCTGGTCACCTTGCAGAATCCCA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTACCGAGGTGCAACATaGAGGCTGACATCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCYRGAT*RLTSSR
Trigger: CCTGGAAGATGTCAGCCTTCATGTTGCACCTCGGTA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGCTTCAAACTTGTTGGTaGGTGTCAGGGACACTTCGA +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSLQTCW*VSGTLR
Trigger: TCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAG...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGACATTCTGTCGCCTCTaGTCATCCATTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSTFCRL*SSISSA
Trigger: AGCTGAGGAAATGGATGAGCAGAGGCGACAGAATGT...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGGGGGACCACAGAGGGTaGAAAACAGTGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLGDHRG*KTVAQL
Trigger: AAGCTGGGCCACTGTTTTGCACCCTCTGTGGTCCCC...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CGGGCCCAGGCCTGGATCTTGATTATAGCATCCAGGTTCGCTTTAAAATGCTGCGGGGACCACAGAGGGTaGAAAACAGTGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RAQAWILIIASRFALKCCGDHRG*KTVAQL
Trigger: AAGCTGGGCCACTGTTTTGCACCCTCTGTGGTCCCC...GCAGCATTTTAAAGCGAACCTGGATGCTATAATCAAGATCCAGGCCTGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTTGATGTTGTCCGTGTaGCGGAAATGCAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQLMLSV*RKCKPV
Trigger: GACTGGCTTGCATTTCCGGCACACGGACAACATCAA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGTCAACAACTTCCAGTaGCCCCTGGACGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVVNNFQ*PLDVGE
Trigger: CTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGAC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCCCAGCTCCCCCTGTTaGTGCTTCTGGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEPSSPC*CFWRRA
Trigger: GGCTCTCCTCCAGAAGCAGCAACAGGGGGAGCTGGG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CGGGCCCAGGCCTGGATCTTGATTATAGCATCCAGGTTCGCTTTAAAATGCTGCTGGCTCACAGCAGCCTaGAGGTCATTCCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAQAWILIIASRFALKCCWLTAA*RSFQLR
Trigger: CCTGAGCTGGAATGACCTGCAGGCTGCTGTGAGCCA...GCAGCATTTTAAAGCGAACCTGGATGCTATAATCAAGATCCAGGCCTGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAGAGGTATCGCCTCCGTaGTGCCCACATTCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSEVSPP*CPHSGP
Trigger: TGGGCCCGAATGTGGGCAGCACGGAGGCGATACCTC...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATCTTGGTCAGCTTCTTaGAGTGGGAGACTACCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPSWSAS*SGRLPP
Trigger: AGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACATCATGTCCGACAGTTaGTCCTTATTCTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: REIRLLGSARTTGGHRGDIMSDS*SLFFLV
Trigger: GACCAAGAAGAATAAGGAGCAACTGTCGGACATGAT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATCGATGGGCTTCTTCATaGTCTCTGGGAGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDRWASS*SLGAEE
Trigger: CTCCTCGGCTCCCAGAGAGCATGAAGAAGCCCATCG...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGCCACACCCTCATACTaGAGCTGCAAGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVATPSY*SCKRSW
Trigger: CCAGGACCTCTTGCAGCTGCAGTATGAGGGTGTGGC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATTCCCATACAGGTCATaGATCTGTGGAGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPFPYRS*ICGANP
Trigger: GGGATTGGCTCCACAGATCCATGACCTGTATGGGAA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGGACTCAGCAAACTTCTaGCGAACAAGGAAGCCACGA +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQDSANF*RTRKPR
Trigger: TCGTGGCTTCCTTGTTCGCCAGAAGTTTGCTGAGTC...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTCCCCAGAGAAGATCTaGCCAGCAGCAGCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVSPEKI*PAAACC
Trigger: ACAGCACGCTGCTGCTGGCCAGATCTTCTCTGGGGA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCACTTTGGTTGCTGTTGTaGTCAGCATCTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPLWLLL*SASVSS
Trigger: GCTGGAGACAGATGCTGACCACAACAGCAACCAAAG...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp CTTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTaGGCGGTCATGGGCAGCAGTGACCTTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LDDKANIGLPEQ*AVMGSSDLGDD
Trigger: GTCATCACCAAGGTCACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAGAGCCTGCTCAGGGGTaGCGTCATAGGGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEEPAQG*RHRGDG
Trigger: GCCATCTCCCCTATGACGTCACCCCTGAGCAGGCTC...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp CACGGACTCGGCCTCCAGGTTCCTGTCTTGAGTTCTTGCCCTGACTTCCTTCAGCTCTTGGTAGACAGCTaGCAGAGGTTCTCGAAGATT +
Preference number: 4 (lower is better)
Translates to: HGLGLQVPVLSSCPDFLQLLVDS*QRFSKI
Trigger: AATCTTCGAGAACCTCTGGCAGCTGTCTACCAAGAG...CTGAAGGAAGTCAGGGCAAGAACTCAAGACAGGAACCTGGAGGCCGAGTCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGTCAACAACTTCCAGTaGCCCCTGGACGTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCVNNFQ*PLDVGE
Trigger: CTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGAC...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAAGGGCATTGCTTCTTTaGCGCTGCGCCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSRALLL*RCAFQG
Trigger: GCCCTGGAAGGCGCAGCGGCAAAGAAGCAATGCCCT...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATTGGGAGACTACCTCCTaGAGGGTGATGCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDWETTS*RVMRFL
Trigger: CAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCA...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTTGCCAAGGATCTCCTaGAGAGCGCTCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFELPRIS*RALCPR
Trigger: GCGGGGACAGAGCGCTCTGCAGGAGATCCTTGGCAA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAAACAGTGGCCCAGCTTaGCCAGTAGCACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GLQMKVVGGAILHVMLNPNSGPA*PVALHS
Trigger: GGAATGGAGTGCTACTGGCCAAGCTGGGCCACTGTT...TGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp CCCAAGTCCCCTGAAAGGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCAACTGGAGGCCATATTTaGCCAGTTCAGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: PKSPERSADEGSRRCHPSTGGHI*PVQRRC
Trigger: ACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGT...TGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACCTTTCAGGGGACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp AGCTGCTGGTTAGAGCGGATCTTCCTAACCACTTCCTCTTGGAGCTTTAGCAACCCGCCTTCTCCATCTTaGCTAGGGCCAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SCWLERIFLTTSSWSFSNPPSPS*LGPAAL
Trigger: AAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGG...GTTGCTAAAGCTCCAAGAGGAAGTGGTTAGGAAGATCCGCTCTAACCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp TGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCTGAGGTTGATGTGGCCCTaGATCTCTGCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CWEVYLMVKAPSCSSSDLRLMWP*ISAWVR
Trigger: CCTCACCCAGGCAGAGATCCAGGGCCACATCAACCT...CAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTTTTCAGGACAGCCCTaGTCCAGAGCCTCATTGATG +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCFSGQP*SRASLM
Trigger: CATCAATGAGGCTCTGGACCAGGGCTGTCCTGAAAA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGAGGCCTCCCGACGGTTaGAGGCATAGTTGTACAGAC +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVRPPDG*RHSCTD
Trigger: GTCTGTACAACTATGCCTCCAACCGTCGGGAGGCCT...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGCCTGTCACCACATCCTaGGGCTGTTCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLPVTTS*GCSTFD
Trigger: GTCAAAGGTGGAACAGCCCCAGGATGTGGTGACAGG...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCCCTCTCGGTGGCATTaGGGAACTTCTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVPSRWH*GTSSPR
Trigger: CCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGG...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTaGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: MKVVGGAILHVM*NPEGCVPRALL
Trigger: AAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATCAGAGAGCCAAAAGTTaGTGTTGTCCGTGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDQRAKS*CCPCAG
Trigger: TCCGGCACACGGACAACATCAACTTTTGGCTCTCTG...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGTGCAGCCTCATCGGCTaGAAACTCATTGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLCSLIG*KLIGQD
Trigger: ATCCTGGCCAATGAGTTTTCAGCCGATGAGGCTGCA...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGGGATCTCTGCCTGGGTaGGGCAGGATTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLGSLPG*GRIHRC
Trigger: ACATCTATGAATCCTGCCTCACCCAGGCAGAGATCC...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp TGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCAATCAGAACCACGGCTaGCAGCATCTCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: CVGKSILWSKHPPAPVLTNQNHG*QHLHSH
Trigger: GTGGCTGTGGAGATGCTGTCAGCCGTGGTTCTGATT...GGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGTGCAACATGAAGGCTaGCATCTTCCAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCVQHEG*HLPGQL
Trigger: CAGCTGGCCTGGAAGATGTCAGCCTTCATGTTGCAC...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCATGACGTTTCTGAAGTaGGAAACAGGGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELMTFLK*ETGRSS
Trigger: TGAAGATCTCCCTGTTTCTCACTTCAGAAACGTCAT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp TTCTTCTGGAAGTATCGCAGACGCCTGAGGTATCGCCTCCGTGCTGCCCACATTACATTCTGTCGCCTCTaGTCATCCATTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FFWKYRRRLRYRLRAAHITFCRL*SSISSA
Trigger: AGCTGAGGAAATGGATGAGCAGAGGCGACAGAATGT...AATGTGGGCAGCACGGAGGCGATACCTCAGGCGTCTGCGATACTTCCAGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp TGTGGAAACCCACTGATGATGGTGTTACCTGTGAGAAGGTGGTCCTGGGGTGTAGATGGCCAGAATAGCTaGATGGACTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: CGNPLMMVLPVRRWSWGVDGQNS*MDCSLI
Trigger: GATGAGGCTGCAGTCCATGCAGCTATTCTGGCCATC...TACACCCCAGGACCACCTTCTCACAGGTAACACCATCATCAGTGGGTTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp TGGATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGCAGAGATGGTACCGAGGTaGAACATGAAGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: WILMTAGSKVLKTWEDSAEMVPR*NMKADI
Trigger: GATGTCAGCCTTCATGTTGCACCTCGGTACCATCTC...TGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCATCATGTCCGACAGTTaGTCCTTATTCTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELIMSDS*SLFFLV
Trigger: GACCAAGAAGAATAAGGAGCAACTGTCGGACATGAT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTCTGCCGTTTCTCTCTaGTCAGTGACTTTAATCCCT +
Preference number: 4 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQSAVSL*SVTLIP
Trigger: AGGGATTAAAGTCACTGAGCAGAGAGAAACGGCAGA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATCTGTCCCCGCCCATTaGGGTAGAACCTCACCACCA +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSSVPAH*GRTSPP
Trigger: TGGTGGTGAGGTTCTACCGCAATGGGCGGGGACAGA...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATTCAGGACTCGAAGGTaGCGGCTCTCCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSFRTRR*RLSPEK
Trigger: CTTCTCTGGGGAGAGCCGGCACCTTCGAGTCCTGAA...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTTCAGGACTCGAAGGTaGCGGCTCTCCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEFRTRR*RLSPEK
Trigger: CTTCTCTGGGGAGAGCCGGCACCTTCGAGTCCTGAA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAGCCACACCCTCATACTaGAGCTGCAAGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSATPSY*SCKRSW
Trigger: CCAGGACCTCTTGCAGCTGCAGTATGAGGGTGTGGC...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp CGGGCCCAGGCCTGGATCTTGATTATAGCATCCAGGTTCGCTTTAAAATGCTGCTACTTCTCTGAGCCGTaGTTGTGTCCTCGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RAQAWILIIASRFALKCCYFSEP*LCPRWL
Trigger: GAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTA...GCAGCATTTTAAAGCGAACCTGGATGCTATAATCAAGATCCAGGCCTGGGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGAGGGTGCAAAACAGTaGCCCAGCTTGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEEGAKQ*PSLASS
Trigger: GCTACTGGCCAAGCTGGGCCACTGTTTTGCACCCTC...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGTGGAAACCCACTGATGATGGTGTTACCTGTGAGAAGGTGGTCCTGGGGTGTAGATGTCTGTGGTCTCTaGGAGGAAGATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGNPLMMVLPVRRWSWGVDVCGL*EEDRRQ
Trigger: CTGCCTTCGATCTTCCTCCCAGAGACCACAGACATC...TACACCCCAGGACCACCTTCTCACAGGTAACACCATCATCAGTGGGTTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp TGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCCAGGTCATGGATCTGTaGAGCCAATCCCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: CVGKSILWSKHPPAPVLTQVMDL*SQSQPE
Trigger: TTCCGGCTGGGATTGGCTCCACAGATCCATGACCTG...GGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp TGGATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGCATTCCCATACAGGTCATaGATCTGTGGAGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: WILMTAGSKVLKTWEDSAFPYRS*ICGANP
Trigger: GGGATTGGCTCCACAGATCCATGACCTGTATGGGAA...TGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGAAGGCCGGTAACTaGAGGCCATATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVLKAGN*RPYLAS
Trigger: ACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAG...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGTGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCCGGCTGAAAACTCATTaGCCAGGATGCCCCCGATCT +
Preference number: 4 (lower is better)
Translates to: CVGKSILWSKHPPAPVLTRLKTH*PGCPRS
Trigger: AGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCG...GGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATTCCTCCCAGGTTAGATaGGAGGTATTGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDSSQVR*EVLRWQ
Trigger: CTGCCACCTCAATACCTCCCATCTAACCTGGGAGGA...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGCTTGGCCAAATAGATaGGCTGAGTCTGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVAWPNR*AESAAG
Trigger: ACCTGCTGCAGACTCAGCCCATCTATTTGGCCAAGC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTGGACAGGGTCTGTGTaGATGCTGACTGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVWTGSV*MLTDLS
Trigger: AGACAGGTCAGTCAGCATCCACACAGACCCTGTCCA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCACCTTCCCAGAACTCTTaGGTTTGGGGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSPSQNS*VWGPGG
Trigger: ACCACCTGGCCCCCAAACCCAAGAGTTCTGGGAAGG...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp CCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCCAGAGAGCCAAAAGTTaGTGTTGTCCGTGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PIQLRSPPDSGSRGERIFQRAKS*CCPCAG
Trigger: TCCGGCACACGGACAACATCAACTTTTGGCTCTCTG...GAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGGAAGAGGAAGAGACTaGGAGCGTGAATGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVGRGRD*ERECSR
Trigger: TCTACTGCATTCACGCTCTCAGTCTCTTCCTCTTCC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp TGTTGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTGCTCCAGTTCTGACCTGTGCAGCCTCATCGGCTaGAAACTCATTGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CWEVYLMVKAPSCSSSDLCSLIG*KLIGQD
Trigger: ATCCTGGCCAATGAGTTTTCAGCCGATGAGGCTGCA...CAGGTCAGAACTGGAGCAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTTGGGATTCTGCAAGGTaGCCAGAGTGTCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCWDSAR*PECPLP
Trigger: TGGTAGAGGACACTCTGGTCACCTTGCAGAATCCCA...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp ATGAAGGTAGTAGGCGGTGCCATCCTTCATGTCATGTTGAACCCAGAAGGCTGTGGATCTCTGCCTGGGTaGGGCAGGATTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: MKVVGGAILHVMLNPEGCGSLPG*GRIHRC
Trigger: ACATCTATGAATCCTGCCTCACCCAGGCAGAGATCC...ACAGCCTTCTGGGTTCAACATGACATGAAGGATGGCACCGCCTACTACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTCCGGATGGCTTTGTTaGTCCTCCACACAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFESGWLC*SSTQPG
Trigger: TCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGCTCGGAAAAATGCTTaGATCTTCACAACGGAGTCA +
Preference number: 4 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCARKNA*IFTTES
Trigger: TGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGGGGCTGTTCCACCTTTaGCTTTATTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLGLFHL*LYFLLE
Trigger: CTCCAGGAGGAAATAAAGTCAAAGGTGGAACAGCCC...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGGGCTGTTCCACCTTTaGCTTTATTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVGLFHL*LYFLLE
Trigger: CTCCAGGAGGAAATAAAGTCAAAGGTGGAACAGCCC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCCAGGAACTTGGCATTaGCGAAAAACCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVPGTWH*RKTFLP
Trigger: AGGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGG...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATTCTTGGTCAGCTTCTTaGAGTGGGAGACTACCTCCT +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDSWSAS*SGRLPP
Trigger: AGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGA...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGAACAGTGGCCCAGCTTaGCCAGTAGCACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFENSGPA*PVALHS
Trigger: GGAATGGAGTGCTACTGGCCAAGCTGGGCCACTGTT...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp TGGATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGCATGTCATAGATGTCTGTaGTCTCTGGGAGGAAGATCG +
Preference number: 4 (lower is better)
Translates to: WILMTAGSKVLKTWEDSACHRCL*SLGGRS
Trigger: CGATCTTCCTCCCAGAGACCACAGACATCTATGACA...TGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCAGGTCATGGATCTGTaGAGCCAATCCCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEQVMDL*SQSQPE
Trigger: TTCCGGCTGGGATTGGCTCCACAGATCCATGACCTG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp GGAGCTTTAGCAACTCCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGACTGAAGGCCGGTAACTaGAGGCCATATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GALATPIQLRSPPDSGSRLKAGN*RPYLAS
Trigger: ACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAG...TCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGGAGTTGCTAAAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp CAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCGGACTACATCGTCATGATTCCTaGCATTGGCCGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLRSPPDSGSRGERIFGLHRHDS*HWPPSP
Trigger: TGGAGAAGGCGGCCAATGCCAGGAATCATGACGATG...TAGTCCGAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAATGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGECPRWL*PLLGGS
Trigger: AGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACA...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGTTGTTTTCAGGACTTTaGCCATATACCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: TIPLGREGQALWPELWSSLFSGL*PYTSSH
Trigger: ATGGGATGAGGTATATGGCCAAAGTCCTGAAAACAA...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTTGTTTTCAGGACTTTaGCCATATACCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: PSRTIPLGREGQALWPELLFSGL*PYTSSH
Trigger: ATGGGATGAGGTATATGGCCAAAGTCCTGAAAACAA...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAAGGAGCGACCACAGCTaGGTTCAGGAAGCGGTAGTA +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSRSDHS*VQEAVV
Trigger: TACTACCGCTTCCTGAACCCAGCTGTGGTCGCTCCT...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACCTTCCCAGAACTCTTaGGTTTGGGGGCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEPSQNS*VWGPGG
Trigger: ACCACCTGGCCCCCAAACCCAAGAGTTCTGGGAAGG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp GCACCCTCCTGCTCCAGTTCTGACCTGTCCCTGTGCTaGTTGGTCTCTACCAACTTGACACAAATCCAGATA +
Preference number: 4 (lower is better)
Translates to: APSCSSSDLSLC*LVSTNLTQIQI
Trigger: TATCTGGATTTGTGTCAAGTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGAACTGGAGCAGGAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 72 bp TTTAAAATGCTGCAGCCGCTCCTGGTAAGCCTTCCGTaGTCTATAACCCCGCCAGTGAGCCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: FKMLQPLLVSLP*SITPPVSLDLD
Trigger: ATCAAGATCCAGGCTCACTGGCGGGGTTATAGACAACGGAAGGCTTACCAGGAGCGGCTGCAGCATTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAATCAGAACCACGGCTaGCAGCATCTCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGENQNHG*QHLHSH
Trigger: GTGGCTGTGGAGATGCTGTCAGCCGTGGTTCTGATT...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGGGCCTCCTCCTGGTTaGTCCAGCTCTTATAGATGT +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEGPPPG*SSSYRC
Trigger: ACATCTATAAGAGCTGGATCAACCAGGAGGAGGCCC...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCACTATGTTGTCCCCAATaGGGTCAGAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSLCCPQ*GQRWWV
Trigger: CACCCACCATCTCTGACCTCATTGGGGACAACATAG...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATCTCTTGGTAGACAGCTaGCAGAGGTTCTCGAAGATT +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDLLVDS*QRFSKI
Trigger: AATCTTCGAGAACCTCTGGCAGCTGTCTACCAAGAG...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAATGGGAGACTACCTCCTaGAGGGTGATGCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEWETTS*RVMRFL
Trigger: CAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCA...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTGTCATAGATGTCTGTaGTCTCTGGGAGGAAGATCG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVCHRCL*SLGGRS
Trigger: CGATCTTCCTCCCAGAGACCACAGACATCTATGACA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACGGCTGAAAACTCATTaGCCAGGATGCCCCCGATCT +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGERLKTH*PGCPRS
Trigger: AGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACCCTCCTTGATGGCCTaGTTGATAGCAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEPSLMA*LIAATP
Trigger: TGGTGTGGCTGCTATCAACCAGGCCATCAAGGAGGG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTGGACAGGGTCTGTGTaGATGCTGACTGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEWTGSV*MLTDLS
Trigger: AGACAGGTCAGTCAGCATCCACACAGACCCTGTCCA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACCCTCTCGGTGGCATTaGGGAACTTCTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEPSRWH*GTSSPR
Trigger: CCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGGTTGCAGATGTCCTTaGCCAGCTCGTCTACAAGTC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEGCRCP*PARLQV
Trigger: GACTTGTAGACGAGCTGGCCAAGGACATCTGCAACC...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR TCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCGAGTTCCTCAGCTGTaGATTTCACTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVRVPQL*ISLSHT
Trigger: TGTATGGGAAAGTGAAATTCACAGCTGAGGAACTCG...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp ATCCAGATATATCTGGGAAGATATATCTTAAGACAATGTTCCCACCGGGTAGCCCCTGGACCTGTTCATTaGCCTGGCTCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IQIYLGRYILRQCSHRVAPGPVH*PGSQQP
Trigger: AGGCTGCTGTGAGCCAGGTCAATGAACAGGTCCAGG...GGCTACCCGGTGGGAACATTGTCTTAAGATATATCTTCCCAGATATATCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTCCTTCATGTCATGTTaGACCCAGAAGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFESFMSC*TQKAVS
Trigger: GGACACAGCCTTCTGGGTTCAACATGACATGAAGGA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCCAGGAACTTGGCATTaGCGAAAAACCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEPGTWH*RKTFLP
Trigger: AGGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR GCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTCTGCCGTTTCTCTCTaGTCAGTGACTTTAATCCCT +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVSAVSL*SVTLIP
Trigger: AGGGATTAAAGTCACTGAGCAGAGAGAAACGGCAGA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp AGTCATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTTTTTCAGGACAGCCCTaGTCCAGAGCCTCATTGATG +
Preference number: 4 (lower is better)
Translates to: SHHGLSWLGKMLESSQRSFSGQP*SRASLM
Trigger: CATCAATGAGGCTCTGGACCAGGGCTGTCCTGAAAA...ACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTCTGAAAGATCAGCTTaGCCAAATAGATGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVSERSA*PNRWAE
Trigger: CTCAGCCCATCTATTTGGCCAAGCTGATCTTTCAGA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGATCCCATACGGAATGTaGTCCACAGATGAACTGATG +
Preference number: 4 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVIPYGM*STDELM
Trigger: CATCAGTTCATCTGTGGACCACATTCCGTATGGGAT...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATATCCCATACGGAATGTaGTCCACAGATGAACTGATG +
Preference number: 4 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDIPYGM*STDELM
Trigger: CATCAGTTCATCTGTGGACCACATTCCGTATGGGAT...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCACTTTGGTTGCTGTTGTaGTCAGCATCTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSLWLLL*SASVSS
Trigger: GCTGGAGACAGATGCTGACCACAACAGCAACCAAAG...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAGGTTGCAGATGTCCTTaGCCAGCTCGTCTACAAGTC +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEGCRCP*PARLQV
Trigger: GACTTGTAGACGAGCTGGCCAAGGACATCTGCAACC...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
3UTR CAA 72 bp AGTTCTAAACTTGGGTATTCCCTGCCCAGCTGTGTGTaGGGAAGTCTATCTTATGGTCAAAGCACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSKLGYSLPSCV*GSLSYGQSTLL
Trigger: CAGGAGGGTGCTTTGACCATAAGATAGACTTCCCAACACACAGCTGGGCAGGGAATACCCAAGTTTAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR GCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAGAGATGGTACCGAGGTaGAACATGAAGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEEMVPR*NMKADI
Trigger: GATGTCAGCCTTCATGTTGCACCTCGGTACCATCTC...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR GCA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAGAAGGTAGTAGGCGGTaGCATCCTTCATGTCATGTT +
Preference number: 4 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSEGSRR*HPSCHV
Trigger: AACATGACATGAAGGATGGCACCGCCTACTACCTTC...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCATCACGGGCTTTCCTaGCTCGGAAAAATGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEHHGLS*LGKMLE
Trigger: TTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CCA 90 bp ATCCAGATATATCTGGGAAGATATATCTTAAGACAATGTTCCCACCGGGTAGCCCATGATTCCTGGCATTaGCCGCCTTCTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: IQIYLGRYILRQCSHRVAHDSWH*PPSPSW
Trigger: CCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATG...GGCTACCCGGTGGGAACATTGTCTTAAGATATATCTTCCCAGATATATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 72 bp GTAGTCATCACGGGCTTTCCTGGCTCGGAAAAATGCTaGAATCTTCACAACGGAGTCAACGTTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VVITGFPGSEKC*NLHNGVNVLLE
Trigger: TTCCAGAAGAACGTTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATGACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR TCA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGATGACGTTTCTGAAGTaGGAAACAGGGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEMTFLK*ETGRSS
Trigger: TGAAGATCTCCCTGTTTCTCACTTCAGAAACGTCAT...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CCA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACTAACCACTTCCTCTTaGAGCTTTAGCAACTCCGAT +
Preference number: 4 (lower is better)
Translates to: QVRINTPVTHIRTTTSGELTTSS*SFSNSD
Trigger: ATCGGAGTTGCTAAAGCTCCAAGAGGAAGTGGTTAG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR TCA 90 bp ATCCAGATATATCTGGGAAGATATATCTTAAGACAATGTTCCCACCGGGTAGCCCGAGTTCCTCAGCTGTaGATTTCACTTTCCCATACA +
Preference number: 4 (lower is better)
Translates to: IQIYLGRYILRQCSHRVARVPQL*ISLSHT
Trigger: TGTATGGGAAAGTGAAATTCACAGCTGAGGAACTCG...GGCTACCCGGTGGGAACATTGTCTTAAGATATATCTTCCCAGATATATCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
3UTR CAA 72 bp TCTGACCTGTCCCTGTGCTTGTTGGTCTCTACCAACTaGACACAAATCCAGATATATCTGGGAAGATATATC +
Preference number: 4 (lower is better)
Translates to: SDLSLCLLVSTN*TQIQIYLGRYI
Trigger: GATATATCTTCCCAGATATATCTGGATTTGTGTCAAGTTGGTAGAGACCAACAAGCACAGGGACAGGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS TCA 90 bp CCTTGGCCAGCTCGTCTACAAGTCCCTGGTAGCAGTCACTGGCCCTaGCCAGCCCCAGGCCCTGTAGCCGACGCAGGTTCCGCAGAACGC +
Preference number: 5 (lower is better)
Translates to: PWPARLQVPGSSHWP*PAPGPVADAGSAER
Trigger: GCGTTCTGCGGAACCTGCGTCGGCTACAGGGCCTGGGGCTGGTCAGGGCCAGTGACTGCTACCAGGGACTTGTAGACGAGCTGGCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp GGGCCCCTCCCTGCAGGGTGCCCCGCTGCTTACTTCTCTGAGCCGTaGTTGTGTCCTCGTTGGCTCTGGCCACTCCTTGGCGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: GPLPAGCPAAYFSEP*LCPRWLWPLLGGSP
Trigger: AGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCCTGCAGGGAGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS GCA 90 bp CCCTGCAGTGTGGTCCGGAGCCTCAGCATCTCTGCCTTCCGCCGTTaGCGGTGCCTACGCTGGTTGCAGATGTCCTTGGCCAGCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PCSVVRSLSISAFRR*RCLRWLQMSLASSS
Trigger: AGACGAGCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGATGCTGAGGCTCCGGACCACACTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGGGCCTTCCAGAGCAGTaGGCGGTCATGGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPGLPEQ*AVMGSS
Trigger: ACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCC...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS GCA 90 bp GGCCCCAGGGTTCTGCCTCTCCAGAGCGTCGTCAACAACTTCCAGTaGCCCCTGGACGTTGGCGAGGTTGATGTGGCCCTGGATCTCTGC +
Preference number: 5 (lower is better)
Translates to: GPRVLPLQSVVNNFQ*PLDVGEVDVALDLC
Trigger: GCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCTGGAGAGGCAGAACCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp GGGTGCCCCGCTGCTTACTTCTCTGAGCCGTGCTTGTGTCCTCGTTaGCTCTGGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: GCPAAYFSEPCLCPR*LWPLLGGSPPATAQ
Trigger: CTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACCCCTTCCCAGAACTCTaGGGTTTGGGGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDPFPEL*GLGARW
Trigger: CCACCTGGCCCCCAAACCCAAGAGTTCTGGGAAGGG...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp GGGTTCTGCCTCTCCAGAGCGTCGTCAACAACTTCCAGTGCCCCCTaGACGTTGGCGAGGTTGATGTGGCCCTGGATCTCTGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GFCLSRASSTTSSAP*TLARLMWPWISAWV
Trigger: CACCCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCTGGAGAGGCAGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp CCCGCTGCTTACTTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PAAYFSEPCLCPRWL*PLLGGSPPATAQLQ
Trigger: CTGGAGCTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp TCGGAGGGCCACATTGGGGTTCCTCAACACACGCTCTGTCTGGGCTGCCTTGCCAGGATGCCCCCGATCTaGCTGAAGGCCGGTAACTGG +
Preference number: 5 (lower is better)
Translates to: SEGHIGVPQHTLCLGCLARMPPI*LKAGNW
Trigger: CCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCT...GGCAAGGCAGCCCAGACAGAGCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS TCA 90 bp TCAGCAAAGGTTCCTCTCACCCCTTGTAGGGCCAGGACAGGATCGTaGAGGGCCTCAAGCAAGGCCCCAGGGTTCTGCCTCTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SAKVPLTPCRARTGS*RASSKAPGFCLSRA
Trigger: CGCTCTGGAGAGGCAGAACCCTGGGGCCTTGCTTGAGGCCCTTCACGATCCTGTCCTGGCCCTACAAGGGGTGAGAGGAACCTTTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 90 bp GGTGGCTCCCCAAGGTCTTCTAGGAGCTGGTGCAGTGGGTCTTGGTaGCCTGGGGCCAGCTGGTCTTGGTGTTCGAGCAAGAGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GGSPRSSRSWCSGSW*PGASWSWCSSKSLC
Trigger: ACACAGGCTCTTGCTCGAACACCAAGACCAGCTGGCCCCAGGTCACCAAGACCCACTGCACCAGCTCCTAGAAGACCTTGGGGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp AGCCCCAGGCCCTGTAGCCGACGCAGGTTCCGCAGAACGCGTTGCTaGTTCTCCGACAGTGACAGGAGACTGTGTGCCATTAGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: SPRPCSRRRFRRTRC*FSDSDRRLCAISEW
Trigger: CCACTCACTAATGGCACACAGTCTCCTGTCACTGTCGGAGAAGCAGCAACGCGTTCTGCGGAACCTGCGTCGGCTACAGGGCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp ACCAGCCCCAGGCCCTGTAGCCGACGCAGGTTCCGCAGAACGCGTTaGTGCTTCTCCGACAGTGACAGGAGACTGTGTGCCATTAGTGAG +
Preference number: 5 (lower is better)
Translates to: TSPRPCSRRRFRRTR*CFSDSDRRLCAISE
Trigger: CTCACTAATGGCACACAGTCTCCTGTCACTGTCGGAGAAGCAGCAACGCGTTCTGCGGAACCTGCGTCGGCTACAGGGCCTGGGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp CACCAAGGGCTATTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCACAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HQGLFSEPCLCPRWL*PLLGGSPPATAQLQ
Trigger: CTGGAGCTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAATAGCCCTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS CCA 90 bp CAGCCACACCAAGGGCTATTCTCTGAGCCGTGCTTGTGTCCTCGTTaGCTCTGGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: QPHQGLFSEPCLCPR*LWPLLGGSPPATAQ
Trigger: CTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAATAGCCCTTGGTGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGGCAGAGAGCCAAAAGTaGATGTTGTCCGTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPAESQK*MLSVCR
Trigger: CCGGCACACGGACAACATCAACTTTTGGCTCTCTGC...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGGCCGCCTTCTCCATCTaGGCTAGGGCCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: TIPLGREGQALWPELWSSAAFSI*ARASSS
Trigger: AGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGC...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGCTGGTAAGCCTTCCGTaGTCTATAACCCCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPLVSLP*SITPPV
Trigger: CACTGGCGGGGTTATAGACAACGGAAGGCTTACCAG...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCCGGTGCCTACGCTGGTaGCAGATGTCCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSRTIPLGREGQALWPELRCLRW*QMSLAS
Trigger: GCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCG...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp CAGTGCCCCCTGGACGTTGGCGAGGTTGATGTGGCCCTGGATCTCTaGCTGGGTGAGGCAGGATTCATAGATGTCCTGCTCCTGACCATC +
Preference number: 5 (lower is better)
Translates to: QCPLDVGEVDVALDL*LGEAGFIDVLLLTI
Trigger: GATGGTCAGGAGCAGGACATCTATGAATCCTGCCTCACCCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp GTCCCCGCCCATTGCGGTAGAACCTCACCACCAGTCTCACCACTGTaGGGTTGCCTGTCACCACATCCTGGGGCTGTTCCACCTTTGACT +
Preference number: 5 (lower is better)
Translates to: VPAHCGRTSPPVSPL*GCLSPHPGAVPPLT
Trigger: AGTCAAAGGTGGAACAGCCCCAGGATGTGGTGACAGGCAACCCCACAGTGGTGAGACTGGTGGTGAGGTTCTACCGCAATGGGCGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp CTTGGCGCCAACACATCAACCGACGATGGGCTTCTTCATGCTCTCTaGGAGCCGAGGAGGTCAGGATCTCTTCCAGGGACTCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LGANTSTDDGLLHAL*EPRRSGSLPGTPQG
Trigger: ACCCTGGGGAGTCCCTGGAAGAGATCCTGACCTCCTCGGCTCCCAGAGAGCATGAAGAAGCCCATCGTCGGTTGATGTGTTGGCGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACAAACAGTGGCCCAGCTaGGCCAGTAGCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDKQWPS*ASSTPF
Trigger: GAATGGAGTGCTACTGGCCAAGCTGGGCCACTGTTT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACTCCTTGATGGCCTGGTaGATAGCAGCCACACCAAGG +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDSLMAW*IAATPR
Trigger: CCTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGA...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCACCTCGGAGGGCCACATaGGGGTTCCTCAACACACGC +
Preference number: 5 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPPRRAT*GFLNTR
Trigger: GCGTGTGTTGAGGAACCCCAATGTGGCCCTCCGAGG...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCACCCTTCCCAGAACTCTaGGGTTTGGGGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPPFPEL*GLGARW
Trigger: CCACCTGGCCCCCAAACCCAAGAGTTCTGGGAAGGG...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 90 bp TCCTTGATGGCCTGGTTGATAGCAGCCACACCAAGGGCTATTCTCTaGGCCGTGCTTGTGTCCTCGTTGGCTCTGGCCACTCCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: SLMAWLIAATPRAIL*AVLVSSLALATPWR
Trigger: CCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAATAGCCCTTGGTGTGGCTGCTATCAACCAGGCCATCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS GCA 90 bp GCTGCCAGAGGTTCTCGAAGATTCCCCAGGAGAGCATTGGGATTCTaGAAGGTGACCAGAGTGTCCTCTACCACCCCTCGCTCCACGGCA +
Preference number: 5 (lower is better)
Translates to: AARGSRRFPRRALGF*KVTRVSSTTPRSTA
Trigger: TGCCGTGGAGCGAGGGGTGGTAGAGGACACTCTGGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAATCTTCGAGAACCTCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 90 bp TCACAGGCTTGGCGCCAACACATCAACCGACGATGGGCTTCTTCATaGTCTCTGGGAGCCGAGGAGGTCAGGATCTCTTCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SQAWRQHINRRWASS*SLGAEEVRISSRDS
Trigger: GGAGTCCCTGGAAGAGATCCTGACCTCCTCGGCTCCCAGAGAGCATGAAGAAGCCCATCGTCGGTTGATGTGTTGGCGCCAAGCCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp ACACCATGGGTTTGGCCACAGCCACCATGTCTGAGTATTCATCGATaGCGAAGCGCTCCTCTGGCTCTGGTACCCGGCAGGCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TPWVWPQPPCLSIHR*RSAPLALVPGRLCR
Trigger: TCTGCAGAGCCTGCCGGGTACCAGAGCCAGAGGAGCGCTTCGCCATCGATGAATACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp GCCGAGGAGGTCAGGATCTCTTCCAGGGACTCCCCAGGGTGGAACTaGATGAGGTCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTT +
Preference number: 5 (lower is better)
Translates to: AEEVRISSRDSPGWN*MRSASICLVLRSRL
Trigger: AAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCTGGAAGAGATCCTGACCTCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp CCTGTTCCTCATAGAAGATGGTTTTTGCATCTAGGCCCTGCAGTGTaGTCCGGAGCCTCAGCATCTCTGCCTTCCGCCGTTGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: PVPHRRWFLHLGPAV*SGASASLPSAVAGA
Trigger: GGCACCGGCAACGGCGGAAGGCAGAGATGCTGAGGCTCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATGAGGAACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACAGCCTGGAGCATAGTTaGCTCTTCATCCCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDSLEHS*LFIPLL
Trigger: GAGAAGGGGGATGAAGAGCAAACTATGCTCCAGGCT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GCCGCTCCTGGTAAGCCTTCCGTTGTCTATAACCCCGCCAGTGAGCCTGGATCTTTCTCTGAGCCGTGCTaGTGTCCTCGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: AAPGKPSVVYNPASEPGSFSEPC*CPRWLW
Trigger: CCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAA...AGATCCAGGCTCACTGGCGGGGTTATAGACAACGGAAGGCTTACCAGGAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGAGCCCTTCAAACTTGTaGGTGAGTGTCAGGGACACT +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPSPSNL*VSVRDT
Trigger: AGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGAGACTTTGGTTGCTGTaGTGGTCAGCATCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPRLWLL*WSASVS
Trigger: GGAGACAGATGCTGACCACAACAGCAACCAAAGTCT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp CCTGACCATCGTCATGATTCCTGGCATTGGCCGCCTTCTCCATCTTaGCTAGGGCCAGCAGCTCTTGGTAGACAGCTGCCAGAGGTTCTC +
Preference number: 5 (lower is better)
Translates to: PDHRHDSWHWPPSPS*LGPAALGRQLPEVL
Trigger: GAGAACCTCTGGCAGCTGTCTACCAAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATGACGATGGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp ACAGGGTCTGTGTGGATGCTGACTGACCTGTCTTCTAGCACATCCTaGATGACCTTGCCAAGGATCTCCTGCAGAGCGCTCTGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: TGSVWMLTDLSSSTS*MTLPRISCRALCPR
Trigger: GCGGGGACAGAGCGCTCTGCAGGAGATCCTTGGCAAGGTCATCCAGGATGTGCTAGAAGACAGGTCAGTCAGCATCCACACAGACCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCAGTTCAGAGGCGATGTaGCCGAGTTCCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PSRTIPLGREGQALWPELSSEAM*PSSSAV
Trigger: CACAGCTGAGGAACTCGGCAACATCGCCTCTGAACT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp TCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGGCCGCCTTCTCCATCTaGGCTAGGGCCAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SCHVEPRRLCPQGIASLPAAFSI*ARASSS
Trigger: AGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGC...CGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGGGCTCGGAAAAATGCTaGAATCTTCACAACGGAGTC +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPGSEKC*NLHNGV
Trigger: GACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCC...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS TCA 90 bp CCTCATCGGCTGAAAACTCATTGGCCAGGATGCCCCCGATCTTGCTaGAGGCCGGTAACTGGAGGCCATATTTGGCCAGTTCAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: PHRLKTHWPGCPRSC*RPVTGGHIWPVQRR
Trigger: TCGCCTCTGAACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 90 bp ACAGACATCTCCAGCTTCCAGAGCACGGTTAATCAGAACCACGGCTaGCAGCATCTCCACAGCCACAAAGAGCTCCTCCTGGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TDISSFQSTVNQNHG*QHLHSHKELLLAQL
Trigger: GAGCTGGGCCAGGAGGAGCTCTTTGTGGCTGTGGAGATGCTGTCAGCCGTGGTTCTGATTAACCGTGCTCTGGAAGCTGGAGATGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 90 bp CCCTACAGTGATGTACACCATGGGTTTGGCCACAGCCACCATGTCTaGGTATTCATCGATGGCGAAGCGCTCCTCTGGCTCTGGTACCCG +
Preference number: 5 (lower is better)
Translates to: PYSDVHHGFGHSHHV*VFIDGEALLWLWYP
Trigger: CGGGTACCAGAGCCAGAGGAGCGCTTCGCCATCGATGAATACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACTGTAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp ATGGTACCGAGGTGCAACATGAAGGCTGACATCTTCCAGGCCAGCTaGAGGAAGCAGCAGGGCAGACAGAGTCTTTTCAGGACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: MVPRCNMKADIFQAS*RKQQGRQSLFRTAL
Trigger: CAGGGCTGTCCTGAAAAGACTCTGTCTGCCCTGCTGCTTCCTGCAGCTGGCCTGGAAGATGTCAGCCTTCATGTTGCACCTCGGTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp GCAGCCACTCCCCTCCGGATGGCTTTGTTGATCCTCCACACAGCCTaGAGCATAGTTTGCTCTTCATCCCCCTTCTCATTGGCTACAGCC +
Preference number: 5 (lower is better)
Translates to: AATPLRMALLILHTA*SIVCSSSPFSLATA
Trigger: GGCTGTAGCCAATGAGAAGGGGGATGAAGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGGAGTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCATGGGCAGCAGTGACCTTGGTAACTGGAGGCCATATTaGGCCAGTTCAGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: ANIGLPEQLAVMGSSDLGNWRPY*ASSEAM
Trigger: CATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTT...ACCAAGGTCACTGCTGCCCATGACCGCCAACTGCTCTGGAAGGCCAATGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp CCCAAGTCCCCTGAAAGGTCTGCAGATGAAGGTAGTAGGCGGTGCCATCCTTCATCGGCTGAAAACTCATaGGCCAGGATGCCCCCGATC +
Preference number: 5 (lower is better)
Translates to: PKSPERSADEGSRRCHPSSAENS*ARMPPI
Trigger: GATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGA...TGAAGGATGGCACCGCCTACTACCTTCATCTGCAGACCTTTCAGGGGACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTTCCCCAGGAGAGCATaGGGATTCTGCAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQFPRRA*GFCKVT
Trigger: GGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp TGGATCTTGATGACGGCTGGAAGCAAGGTCCTGAAGACGTGGGAAGACTCAGCACCCCTCCGGATGGCTTaGTTGATCCTCCACACAGCC +
Preference number: 5 (lower is better)
Translates to: WILMTAGSKVLKTWEDSAPLRMA*LILHTA
Trigger: GGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGG...TGCTGAGTCTTCCCACGTCTTCAGGACCTTGCTTCCAGCCGTCATCAAGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTTCTCTGAGCCGTGCTaGTGTCCTCGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCFSEPC*CPRWLW
Trigger: CCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACATCCTTCATGTCATGTaGAACCCAGAAGGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDILHVM*NPEGCV
Trigger: GACACAGCCTTCTGGGTTCAACATGACATGAAGGAT...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGACATCCTGGATGACCTaGCCAAGGATCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TIPLGREGQALWPELWSSTSWMT*PRISCR
Trigger: TCTGCAGGAGATCCTTGGCAAGGTCATCCAGGATGT...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATCGGTGCCTACGCTGGTaGCAGATGTCCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDRCLRW*QMSLAS
Trigger: GCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCG...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AGGGAGATAAGGCTGCTGGGCAGTGCTAGGACGACTGGCGGACACCGTGGTGACTCCACACCCAGGAACTaGGCATTGACGAAAAACCTT +
Preference number: 5 (lower is better)
Translates to: REIRLLGSARTTGGHRGDSTPRN*ALTKNL
Trigger: AAGGTTTTTCGTCAATGCCAAGTTCCTGGGTGTGGA...GTCACCACGGTGTCCGCCAGTCGTCCTAGCACTGCCCAGCAGCCTTATCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 90 bp TGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTGGTaGGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCACATGCCCGT +
Preference number: 5 (lower is better)
Translates to: CCCGQHLSPALQTCW*VSGTLRACSGPHAR
Trigger: ACGGGCATGTGGACCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp TTGTTGGTGAGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCACATaGCCGTCTGTGGCTATGTTGTCCCCAATGAGGTCAGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LLVSVRDTSSLLRST*PSVAMLSPMRSEMV
Trigger: CACCATCTCTGACCTCATTGGGGACAACATAGCCACAGACGGGCATGTGGACCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp GGCAGGATTCATAGATGTCCTGCTCCTGACCATCGTCATGATTCCTaGCATTGGCCGCCTTCTCCATCTTGGCTAGGGCCAGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: GRIHRCPAPDHRHDS*HWPPSPSWLGPAAL
Trigger: AAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATGACGATGGTCAGGAGCAGGACATCTATGAATCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GCCTGGAGCTTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCAAAACAGTGGCCCAGCTaGGCCAGTAGCACTCCATTC +
Preference number: 5 (lower is better)
Translates to: AWSLMTKPTLAFQSSWRSKQWPS*ASSTPF
Trigger: GAATGGAGTGCTACTGGCCAAGCTGGGCCACTGTTT...TGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp CCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCAGCCAAAAGTTGATGTaGTCCGTGTGCCGGAAATGC +
Preference number: 5 (lower is better)
Translates to: PSRTIPLGREGQALWPELSQKLM*SVCRKC
Trigger: GCATTTCCGGCACACGGACAACATCAACTTTTGGCT...GAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCAAACTGGAGGCCATATTaGGCCAGTTCAGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPNWRPY*ASSEAM
Trigger: CATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTT...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGTTAGATGGGAGGTATaGAGGTGGCAGCCGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCVRWEV*RWQPEG
Trigger: TCCTTCCGGCTGCCACCTCAATACCTCCCATCTAAC...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCATTCTTGGTCAGCTTCTaGCAGTGGGAGACTACCTCC +
Preference number: 5 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPFLVSF*QWETTS
Trigger: GGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAA...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGCCAGAACTCTTGGGTTaGGGGGCCAGGTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLPELLG*GARWSR
Trigger: CCTTGACCACCTGGCCCCCAAACCCAAGAGTTCTGG...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATCCAGAACTCTTGGGTTaGGGGGCCAGGTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDPELLG*GARWSR
Trigger: CCTTGACCACCTGGCCCCCAAACCCAAGAGTTCTGG...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp GCCCATTGCGGTAGAACCTCACCACCAGTCTCACCACTGTGGGGTTaGCTGTCACCACATCCTGGGGCTGTTCCACCTTTGACTTTATTT +
Preference number: 5 (lower is better)
Translates to: AHCGRTSPPVSPLWG*LSPHPGAVPPLTLF
Trigger: AAATAAAGTCAAAGGTGGAACAGCCCCAGGATGTGGTGACAGGCAACCCCACAGTGGTGAGACTGGTGGTGAGGTTCTACCGCAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCCTGGAGCTTGATGACAAAGCCAACATTGGCCTTCCAGAGCAGTTGGCGGTCAAGCCTGGAGCATAGTTaGCTCTTCATCCCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: AWSLMTKPTLAFQSSWRSSLEHS*LFIPLL
Trigger: GAGAAGGGGGATGAAGAGCAAACTATGCTCCAGGCT...TGACCGCCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCATCAAGCTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGATGACAAAGCCAACATaGGCCTTCCAGAGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQMTKPT*AFQSSW
Trigger: CCAACTGCTCTGGAAGGCCAATGTTGGCTTTGTCAT...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGCAGCCAGGGGCTGTTCCACCTTaGACTTTATTTCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PSSGLRRKELGNGEAQQPGAVPP*TLFPPG
Trigger: TCCAGGAGGAAATAAAGTCAAAGGTGGAACAGCCCC...TGGCTGCTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTCCCAGGAACTTGGCATaGACGAAAAACCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCPRNLA*TKNLPA
Trigger: GGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGGG...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp ACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTGGCCCGAGCTCTGGTCTTCGCGAAGGAACTTCTTGTaGAGCAGGAAGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TIPLGREGQALWPELWSSRRNFL*SRKMRR
Trigger: TCTCCTCATCTTCCTGCTCAACAAGAAGTTCCTTCG...CGAAGACCAGAGCTCGGGCCACAATGCTTGACCCTCCCGCCCAAGAGGAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp ATTCATAGATGTCCTGCTCCTGACCATCGTCATGATTCCTGGCATTaGCCGCCTTCTCCATCTTGGCTAGGGCCAGCAGCTCTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: IHRCPAPDHRHDSWH*PPSPSWLGPAALGR
Trigger: TCTACCAAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATGACGATGGTCAGGAGCAGGACATCTATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGAGGATGCCCCCGATCTaGCTGAAGGCCGGTAACTGG +
Preference number: 5 (lower is better)
Translates to: NTPVTHIRTTTSGERRFERMPPI*LKAGNW
Trigger: CCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCT...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GGTCCTGGGGTGTATAAAAACAAACAAACTGAGCAAGCCACGAGGAGCAAGCCACTCCGGATGGCTTTGTaGATCCTCCACACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GPGVYKNKQTEQATRSKPLRMAL*ILHTAW
Trigger: CCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAG...TGGCTTGCTCCTCGTGGCTTGCTCAGTTTGTTTGTTTTTATACACCCCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGTGCTCCTTATTCTTCTaGGTCAGCTTCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQCSLFF*VSFLQW
Trigger: CCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCA...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGACAGCGACACCCATGGCTTATGAAGCGGAGTTGGGCAGACAGCCTGGCCCGACGTTGACTTTGGCTTaGTTAAAGAGTTTCATGACA +
Preference number: 5 (lower is better)
Translates to: GTATPMAYEAELGRQPGPTLTLA*LKSFMT
Trigger: TGTCATGAAACTCTTTAACAAAGCCAAAGTCAACGT...CGGGCCAGGCTGTCTGCCCAACTCCGCTTCATAAGCCATGGGTGTCGCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp ATGTCCGACAGTTGCTCCTTATTCTTCTTGGTCAGCTTCTTGCAGTaGGAGACTACCTCCTGCAGGGTGATGCGGTTCTTGACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: MSDSCSLFFLVSFLQ*ETTSCRVMRFLTSR
Trigger: TCTGCTCGTCAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCAACTGTCGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp TGGATGAGGTCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTTaGTTGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: WMRSASICLVLRSRL*LLLWSASVSSPSNL
Trigger: CAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATCGGCTGAAAACTCATaGGCCAGGATGCCCCCGATC +
Preference number: 5 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSSAENS*ARMPPI
Trigger: GATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGA...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGCTCCGGATGGCTTTGTaGATCCTCCACACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: NTPVTHIRTTTSGERRFELRMAL*ILHTAW
Trigger: CCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAG...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAACCCCTCCGGATGGCTTaGTTGATCCTCCACACAGCC +
Preference number: 5 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEPLRMA*LILHTA
Trigger: GGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGG...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp TCATGTCATGTTGAACCCAGAAGGCTGTGTCCCCAGGGCATTGCTTCTTTGCCGGCGGGATTCACTAGATaGTCCCAAAAGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: SCHVEPRRLCPQGIASLPAGFTR*SQKAQT
Trigger: TGTCTGTGCCTTTTGGGACAATCTAGTGAATCCCGC...CGGCAAAGAAGCAATGCCCTGGGGACACAGCCTTCTGGGTTCAACATGACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATGCCCAGGCCTGGATCTaGATTATAGCATCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDAQAWI*IIASRF
Trigger: GAACCTGGATGCTATAATCAAGATCCAGGCCTGGGC...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGTTCTTGGTCAGCTTCTaGCAGTGGGAGACTACCTCC +
Preference number: 5 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVFLVSF*QWETTS
Trigger: GGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAA...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTAGAAGCAGACTTTGGTaGCTGTTGTGGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCRSRLW*LLWSAS
Trigger: AGATGCTGACCACAACAGCAACCAAAGTCTGCTTCT...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCCCACTTCAGCCAAGTAGGACAATTCCTCTTGGGCGGGAGGGTCAAGCATTGTTCCACACCCAGGAACTaGGCATTGACGAAAAACCTT +
Preference number: 5 (lower is better)
Translates to: AHFSQVGQFLLGGRVKHCSTPRN*ALTKNL
Trigger: AAGGTTTTTCGTCAATGCCAAGTTCCTGGGTGTGGA...ACAATGCTTGACCCTCCCGCCCAAGAGGAATTGTCCTACTTGGCTGAAGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp TTGCCGAGTTCCTCAGCTGTGAATTTCACTTTCCCATACAGGTCATaGATCTGTGGAGCCAATCCCAGCCGGAAGAGGAAGAGACTGAGA +
Preference number: 5 (lower is better)
Translates to: LPSSSAVNFTFPYRS*ICGANPSRKRKRLR
Trigger: TCTCAGTCTCTTCCTCTTCCGGCTGGGATTGGCTCCACAGATCCATGACCTGTATGGGAAAGTGAAATTCACAGCTGAGGAACTCGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 90 bp GCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTTGGTTGCTGTTGTaGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTGGTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: ASICLVLRSRLWLLL*SASVSSPSNLLVSV
Trigger: GACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp CCTGGATGTATTGGTTGTAGTAGTCACCCTGTTCCTCATAGAAGATaGTTTTTGCATCTAGGCCCTGCAGTGTGGTCCGGAGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PGCIGCSSHPVPHRR*FLHLGPAVWSGASA
Trigger: TGCTGAGGCTCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATGAGGAACAGGGTGACTACTACAACCAATACATCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp CATCACGGGCTTTCCTGGCTCGGAAAAATGCTTGAATCTTCACAACGGAGTCAAAGTTCAGAGGCGATGTaGCCGAGTTCCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: HHGLSWLGKMLESSQRSQSSEAM*PSSSAV
Trigger: CACAGCTGAGGAACTCGGCAACATCGCCTCTGAACT...TTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGAGCCAGGAAAGCCCGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATGCGGGATTCACTAGATaGTCCCAAAAGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDAGFTR*SQKAQT
Trigger: TGTCTGTGCCTTTTGGGACAATCTAGTGAATCCCGC...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATAGACTTTGGTTGCTGTaGTGGTCAGCATCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDRLWLL*WSASVS
Trigger: GGAGACAGATGCTGACCACAACAGCAACCAAAGTCT...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 90 bp CTCCATGTCCACACCCAGGAACTTGGCATTGACGAAAAACCTTCCTaGCTCGTCTCCAGGAGTGATGTCAAAGATGACGTTTCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LHVHTQELGIDEKPS*LVSRSDVKDDVSEV
Trigger: CACTTCAGAAACGTCATCTTTGACATCACTCCTGGAGACGAGGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGGGTGTGGACATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 90 bp TTCCTCAGCTGTGAATTTCACTTTCCCATACAGGTCATGGATCTGTaGAGCCAATCCCAGCCGGAAGAGGAAGAGACTGAGAGCGTGAAT +
Preference number: 5 (lower is better)
Translates to: FLSCEFHFPIQVMDL*SQSQPEEEETESVN
Trigger: ATTCACGCTCTCAGTCTCTTCCTCTTCCGGCTGGGATTGGCTCCACAGATCCATGACCTGTATGGGAAAGTGAAATTCACAGCTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp CCGATTCAGCTGAGAAGTCCTCCTGACTCTGGTTCAAGAGGTGAGCGAATTTTCAGCCAAAAGTTGATGTaGTCCGTGTGCCGGAAATGC +
Preference number: 5 (lower is better)
Translates to: PIQLRSPPDSGSRGERIFSQKLM*SVCRKC
Trigger: GCATTTCCGGCACACGGACAACATCAACTTTTGGCT...GAAAATTCGCTCACCTCTTGAACCAGAGTCAGGAGGACTTCTCAGCTGAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGGCCTCTATGTGTTCCTaGAAACTGCTGAACCTTCAC +
Preference number: 5 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVASMCS*KLLNLH
Trigger: GTGAAGGTTCAGCAGTTTCAAGGAACACATAGAGGC...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGCGGGCCTGGAGCTaGATGACAAAGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: QVRINTPVTHIRTTTSGERRAWS*MTKPTL
Trigger: CAATGTTGGCTTTGTCATCAAGCTCCAGGCCCGCCT...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATTGCTCCTTATTCTTCTaGGTCAGCTTCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDCSLFF*VSFLQW
Trigger: CCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCA...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGACATCCTGGATGACCTaGCCAAGGATCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NTPVTHIRTTTSGERRFETSWMT*PRISCR
Trigger: TCTGCAGGAGATCCTTGGCAAGGTCATCCAGGATGT...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGCAGGCCTGGATGTATaGGTTGTAGTAGTCACCCTG +
Preference number: 5 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEAGLDV*VVVVTL
Trigger: CAGGGTGACTACTACAACCAATACATCCAGGCCTGC...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAGCAGGCCTGGATGTATaGGTTGTAGTAGTCACCCTG +
Preference number: 5 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSAGLDV*VVVVTL
Trigger: CAGGGTGACTACTACAACCAATACATCCAGGCCTGC...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCACCCAGGAACTTGGCATaGACGAAAAACCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSPRNLA*TKNLPA
Trigger: GGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGGG...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGCGAAGGAACTTCTTGTaGAGCAGGAAGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLRRNFL*SRKMRR
Trigger: TCTCCTCATCTTCCTGCTCAACAAGAAGTTCCTTCG...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATTTCCGAAGGAACTTCTaGTTGAGCAGGAAGATGAGG +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDFRRNF*LSRKMR
Trigger: CCTCATCTTCCTGCTCAACAAGAAGTTCCTTCGGAA...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGTTCCGAAGGAACTTCTaGTTGAGCAGGAAGATGAGG +
Preference number: 5 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLFRRNF*LSRKMR
Trigger: CCTCATCTTCCTGCTCAACAAGAAGTTCCTTCGGAA...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AGCTGCTGGTTAGAGCGGATCTTCCTAACCACTTCCTCTTGGAGCTTTAGCAACGCCTCTATGTGTTCCTaGAAACTGCTGAACCTTCAC +
Preference number: 5 (lower is better)
Translates to: SCWLERIFLTTSSWSFSNASMCS*KLLNLH
Trigger: GTGAAGGTTCAGCAGTTTCAAGGAACACATAGAGGC...GTTGCTAAAGCTCCAAGAGGAAGTGGTTAGGAAGATCCGCTCTAACCAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAGGGGCTGTTCCACCTTaGACTTTATTTCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSGAVPP*TLFPPG
Trigger: TCCAGGAGGAAATAAAGTCAAAGGTGGAACAGCCCC...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp TGTGGCCCGAGCTCTGGTCTTCGGAGAAAAGAGCTGGGTAATGGAGAAGCGCAGACGTTGACTTTGGCTTaGTTAAAGAGTTTCATGACA +
Preference number: 5 (lower is better)
Translates to: CGPSSGLRRKELGNGEAQTLTLA*LKSFMT
Trigger: TGTCATGAAACTCTTTAACAAAGCCAAAGTCAACGT...CTGCGCTTCTCCATTACCCAGCTCTTTTCTCCGAAGACCAGAGCTCGGGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 90 bp GACTTTGGCCATATACCTCATCCCATACGGAATGTGGTCCACAGATaGACTGATGGCGACAAAGAACTTCTCAGTCAAGGTGAGGAGACT +
Preference number: 5 (lower is better)
Translates to: DFGHIPHPIRNVVHR*TDGDKELLSQGEET
Trigger: AGTCTCCTCACCTTGACTGAGAAGTTCTTTGTCGCCATCAGTTCATCTGTGGACCACATTCCGTATGGGATGAGGTATATGGCCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp TCGGAAAAATGCTTGAATCTTCACAACGGAGTCAACGTTCTTCTGGAAGTATCGTTCCCCAGGAGAGCATaGGGATTCTGCAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: SEKCLNLHNGVNVLLEVSFPRRA*GFCKVT
Trigger: GGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAA...CGATACTTCCAGAAGAACGTTGACTCCGTTGTGAAGATTCAAGCATTTTTCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS-3UTR CAA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGCCCTTCAAACTTGTaGGTGAGTGTCAGGGACACT +
Preference number: 5 (lower is better)
Translates to: QVRINTPVTHIRTTTSGESPSNL*VSVRDT
Trigger: AGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCT...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp ATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCAAGAAGCAGACTTTGGTaGCTGTTGTGGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: IRTTTSGERRFEVCTQLSRSRLW*LLWSAS
Trigger: AGATGCTGACCACAACAGCAACCAAAGTCTGCTTCT...TGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GTGGGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGATGAGGAGATTGACGTaGACTTTGGCTTTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: VGKGDLRCALSCHGHQQVMRRLT*TLALLK
Trigger: CTTTAACAAAGCCAAAGTCAACGTCAATCTCCTCAT...CACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp AATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAAGGAGATTTGAGTTTAATCCCTTCTGTTaGTCCAGGATCATCATGTCC +
Preference number: 5 (lower is better)
Translates to: NTPVTHIRTTTSGERRFEFNPFC*SRIIMS
Trigger: GGACATGATGATCCTGGACAAACAGAAGGGATTAAA...CTCAAATCTCCTTTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GCTGTCATGGACATCAGCAAGTGCTGCACCAAGTCAAGGCTAGGACAGGATGATAGATTGACGTTGACTTaGGCTTTGTTAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: AVMDISKCCTKSRLGQDDRLTLT*ALLKSF
Trigger: GAAACTCTTTAACAAAGCCAAAGTCAACGTCAATCT...ATCATCCTGTCCTAGCCTTGACTTGGTGCAGCACTTGCTGATGTCCATGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp GGGAAAGGAGATTTGAGGTGTGCACTCAGCTGTCATGGACATCAGCAAGTGCTGAGATTGACGTTGACTTaGGCTTTGTTAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: GKGDLRCALSCHGHQQVLRLTLT*ALLKSF
Trigger: GAAACTCTTTAACAAAGCCAAAGTCAACGTCAATCT...CAGCACTTGCTGATGTCCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAATTTAATCCCTTCTGTTaGTCCAGGATCATCATGTCC +
Preference number: 5 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEFNPFC*SRIIMS
Trigger: GGACATGATGATCCTGGACAAACAGAAGGGATTAAA...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS-3UTR CAA 90 bp CAGGTTAGAATAAATACCCCAGTGACCCACATAAGAACCACCACAAGTGGGGAAATGAGGAGATTGACGTaGACTTTGGCTTTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: QVRINTPVTHIRTTTSGEMRRLT*TLALLK
Trigger: CTTTAACAAAGCCAAAGTCAACGTCAATCTCCTCAT...TTCCCCACTTGTGGTGGTTCTTATGTGGGTCACTGGGGTATTTATTCTAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp GCCCTGCAGTGTGGTCCGGAGCCTCAGCATCTCTGCCTTCCGCCGTaGCCGGTGCCTACGCTGGTTGCAGATGTCCTTGGCCAGCTCGTC +
Preference number: 6 (lower is better)
Translates to: ALQCGPEPQHLCLPP*PVPTLVADVLGQLV
Trigger: GACGAGCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGATGCTGAGGCTCCGGACCACACTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 72 bp GCCCCTCCCTGCAGGGTGCCCCGCTGCTTACTTCTCTaGGCCGTGCTTGTGTCCTCGTTGGCTCTGGCCACT +
Preference number: 6 (lower is better)
Translates to: APPCRVPRCLLL*AVLVSSLALAT
Trigger: AGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCCTGCAGGGAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS GCA 72 bp GTGGTCCGGAGCCTCAGCATCTCTGCCTTCCGCCGTTaGCGGTGCCTACGCTGGTTGCAGATGTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: VVRSLSISAFRR*RCLRWLQMSLA
Trigger: GGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGATGCTGAGGCTCCGGACCAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp CCCCTCCCTGCAGGGTGCCCCGCTGCTTACTTCTCTGAGCCGTGCTaGTGTCCTCGTTGGCTCTGGCCACTCCTTGGCGGATCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PLPAGCPAAYFSEPC*CPRWLWPLLGGSPP
Trigger: TGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCCTGCAGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS GCA 72 bp CCTGCAGGGTGCCCCGCTGCTTACTTCTCTGAGCCGTaGTTGTGTCCTCGTTGGCTCTGGCCACTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: PAGCPAAYFSEP*LCPRWLWPLLG
Trigger: GCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS CAA 72 bp AGCCGTGCTTGTGTCCTCGTTGGCTCTGGCCACTCCTaGGCGGATCTCCTCCAGCCACAGCACAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRACVLVGSGHS*ADLLQPQHSSR
Trigger: CCTGGAGCTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp GCAGGGTGCCCCGCTGCTTACTTCTCTGAGCCGTGCTaGTGTCCTCGTTGGCTCTGGCCACTCCTTGGCGGA +
Preference number: 6 (lower is better)
Translates to: AGCPAAYFSEPC*CPRWLWPLLGG
Trigger: TCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTAAGCAGCGGGGCACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS CAA 90 bp TGCCTCTCCAGAGCGTCGTCAACAACTTCCAGTGCCCCCTGGACGTaGGCGAGGTTGATGTGGCCCTGGATCTCTGCCTGGGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: CLSRASSTTSSAPWT*ARLMWPWISAWVRQ
Trigger: CTGCCTCACCCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCTGGAGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GTTCCTCTCACCCCTTGTAGGGCCAGGACAGGATCGTaGAGGGCCTCAAGCAAGGCCCCAGGGTTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VPLTPCRARTGS*RASSKAPGFCL
Trigger: GAGGCAGAACCCTGGGGCCTTGCTTGAGGCCCTTCACGATCCTGTCCTGGCCCTACAAGGGGTGAGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp AGGCCCTGTAGCCGACGCAGGTTCCGCAGAACGCGTTaGTGCTTCTCCGACAGTGACAGGAGACTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: RPCSRRRFRRTR*CFSDSDRRLCA
Trigger: GGCACACAGTCTCCTGTCACTGTCGGAGAAGCAGCAACGCGTTCTGCGGAACCTGCGTCGGCTACAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp ACTTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTGGCCACTCCTaGGCGGATCTCCTCCAGCCACAGCACAGCTCCAGGGTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: TSLSRACVLVGSGHS*ADLLQPQHSSRVSC
Trigger: ACAGGAGACCCTGGAGCTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS GCA 72 bp GTTCTGCCTCTCCAGAGCGTCGTCAACAACTTCCAGTaGCCCCTGGACGTTGGCGAGGTTGATGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: VLPLQSVVNNFQ*PLDVGEVDVAL
Trigger: CAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCTGGAGAGGCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp CAAGGATCTCCTGCAGAGCGCTCTGTCCCCGCCCATTaGGGTAGAACCTCACCACCAGTCTCACCACTGTGG +
Preference number: 6 (lower is better)
Translates to: QGSPAERSVPAH*GRTSPPVSPLW
Trigger: CCACAGTGGTGAGACTGGTGGTGAGGTTCTACCGCAATGGGCGGGGACAGAGCGCTCTGCAGGAGATCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp TCTCTGCCTTCCGCCGTTGCCGGTGCCTACGCTGGTTaGAGATGTCCTTGGCCAGCTCGTCTACAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: SLPSAVAGAYAG*RCPWPARLQVP
Trigger: AGGGACTTGTAGACGAGCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp ACTTCCAGTGCCCCCTGGACGTTGGCGAGGTTGATGTaGCCCTGGATCTCTGCCTGGGTGAGGCAGGATTCA +
Preference number: 6 (lower is better)
Translates to: TSSAPWTLARLM*PWISAWVRQDS
Trigger: TGAATCCTGCCTCACCCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp AGAGCGTCGTCAACAACTTCCAGTGCCCCCTGGACGTaGGCGAGGTTGATGTGGCCCTGGATCTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RASSTTSSAPWT*ARLMWPWISAW
Trigger: CCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp ATCTCTGCCTTCCGCCGTTGCCGGTGCCTACGCTGGTaGCAGATGTCCTTGGCCAGCTCGTCTACAAGTCCC +
Preference number: 6 (lower is better)
Translates to: ISAFRRCRCLRW*QMSLASSSTSP
Trigger: GGGACTTGTAGACGAGCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp TATTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTGGCCACTCCTaGGCGGATCTCCTCCAGCCACAGCACAGCTCCAGGGTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: YSLSRACVLVGSGHS*ADLLQPQHSSRVSC
Trigger: ACAGGAGACCCTGGAGCTGTGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS GCA 72 bp CCCTGTAGCCGACGCAGGTTCCGCAGAACGCGTTGCTaGTTCTCCGACAGTGACAGGAGACTGTGTGCCATT +
Preference number: 6 (lower is better)
Translates to: PCSRRRFRRTRC*FSDSDRRLCAI
Trigger: AATGGCACACAGTCTCCTGTCACTGTCGGAGAAGCAGCAACGCGTTCTGCGGAACCTGCGTCGGCTACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp CTCTCCAGAGCGTCGTCAACAACTTCCAGTGCCCCCTaGACGTTGGCGAGGTTGATGTGGCCCTGGATCTCT +
Preference number: 6 (lower is better)
Translates to: LSRASSTTSSAP*TLARLMWPWIS
Trigger: AGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAGGGGGCACTGGAAGTTGTTGACGACGCTCTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CTATTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCA +
Preference number: 6 (lower is better)
Translates to: LFSEPCLCPRWL*PLLGGSPPATA
Trigger: TGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAATAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071812.11
CDS CCA 72 bp GTTTGGCCACAGCCACCATGTCTGAGTATTCATCGATaGCGAAGCGCTCCTCTGGCTCTGGTACCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: VWPQPPCLSIHR*RSAPLALVPGR
Trigger: CCTGCCGGGTACCAGAGCCAGAGGAGCGCTTCGCCATCGATGAATACTCAGACATGGTGGCTGTGGCCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp AGCATCTCTGCCTTCCGCCGTTGCCGGTGCCTACGCTaGTTGCAGATGTCCTTGGCCAGCTCGTCTACAAGT +
Preference number: 6 (lower is better)
Translates to: SISAFRRCRCLR*LQMSLASSSTS
Trigger: ACTTGTAGACGAGCTGGCCAAGGACATCTGCAACCAGCGTAGGCACCGGCAACGGCGGAAGGCAGAGATGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp TACTTCTCTGAGCCGTGCTTGTGTCCTCGTTGGCTCTaGCCACTCCTTGGCGGATCTCCTCCAGCCACAGCA +
Preference number: 6 (lower is better)
Translates to: YFSEPCLCPRWL*PLLGGSPPATA
Trigger: TGCTGTGGCTGGAGGAGATCCGCCAAGGAGTGGCCAGAGCCAACGAGGACACAAGCACGGCTCAGAGAAGTA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195465.2
CDS CAA 72 bp GCTGCATGGACTGCAGCCTCATCGGCTGAAAACTCATaGGCCAGGATGCCCCCGATCTTGCTGAAGGCCGGT +
Preference number: 6 (lower is better)
Translates to: AAWTAASSAENS*ARMPPILLKAG
Trigger: ACCGGCCTTCAGCAAGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGATGAGGCTGCAGTCCATGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp AGCCTGCTCAGGTCCACATGCCCGTCTGTGGCTATGTaGTCCCCAATGAGGTCAGAGATGGTGGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SLLRSTCPSVAM*SPMRSEMVGGS
Trigger: GGAGCCACCCACCATCTCTGACCTCATTGGGGACAACATAGCCACAGACGGGCATGTGGACCTGAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp GTGTGGATGCTGACTGACCTGTCTTCTAGCACATCCTGGATGACCTaGCCAAGGATCTCCTGCAGAGCGCTCTGTCCCCGCCCATTGCGG +
Preference number: 6 (lower is better)
Translates to: VWMLTDLSSSTSWMT*PRISCRALCPRPLR
Trigger: CCGCAATGGGCGGGGACAGAGCGCTCTGCAGGAGATCCTTGGCAAGGTCATCCAGGATGTGCTAGAAGACAGGTCAGTCAGCATCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp GACACTTCGAGCCTGCTCAGGTCCACATGCCCGTCTGTGGCTATGTaGTCCCCAATGAGGTCAGAGATGGTGGGTGGCTCCCCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: DTSSLLRSTCPSVAM*SPMRSEMVGGSPRS
Trigger: AGACCTTGGGGAGCCACCCACCATCTCTGACCTCATTGGGGACAACATAGCCACAGACGGGCATGTGGACCTGAGCAGGCTCGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp GCCAGAATAGCTGCATGGACTGCAGCCTCATCGGCTGAAAACTCATaGGCCAGGATGCCCCCGATCTTGCTGAAGGCCGGTAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: ARIAAWTAASSAENS*ARMPPILLKAGNWR
Trigger: CCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGATGAGGCTGCAGTCCATGCAGCTATTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp AGCTCCTTCACGGTGTCAGCAGCCACTCCCCTCCGGATGGCTTTGTaGATCCTCCACACAGCCTGGAGCATAGTTTGCTCTTCATCCCCC +
Preference number: 6 (lower is better)
Translates to: SSFTVSAATPLRMAL*ILHTAWSIVCSSSP
Trigger: GGGGGATGAAGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGGAGTGGCTGCTGACACCGTGAAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GAAGATTCCCCAGGAGAGCATTGGGATTCTGCAAGGTaGCCAGAGTGTCCTCTACCACCCCTCGCTCCACGG +
Preference number: 6 (lower is better)
Translates to: EDSPGEHWDSAR*PECPLPPLAPR
Trigger: CCGTGGAGCGAGGGGTGGTAGAGGACACTCTGGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GGATCTCTTCCAGGGACTCCCCAGGGTGGAACTGGATaGGGTCGGCCAGCATCTGTTTGGTGCTCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: GSLPGTPQGGTG*GRPASVWCSEA
Trigger: TGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCTGGAAGAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp CTGGACGTTGGCGAGGTTGATGTGGCCCTGGATCTCTaGCTGGGTGAGGCAGGATTCATAGATGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LDVGEVDVALDL*LGEAGFIDVLL
Trigger: GAGCAGGACATCTATGAATCCTGCCTCACCCAGGCAGAGATCCAGGGCCACATCAACCTCGCCAACGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp GTGAGGAGACTGCGCAGGGAGATGTCTAATCGTCTCTaGACTTCAGAGTGGCTCAGAGCCTGCTCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: VRRLRREMSNRL*TSEWLRACSGV
Trigger: CACCCCTGAGCAGGCTCTGAGCCACTCTGAAGTGCAGAGACGATTAGACATCTCCCTGCGCAGTCTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp TGGCGCCAACACATCAACCGACGATGGGCTTCTTCATaGTCTCTGGGAGCCGAGGAGGTCAGGATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: WRQHINRRWASS*SLGAEEVRISS
Trigger: GGAAGAGATCCTGACCTCCTCGGCTCCCAGAGAGCATGAAGAAGCCCATCGTCGGTTGATGTGTTGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp ATCTTCTTCAGGGGGACCACAGAGGGTGCAAAACAGTaGCCCAGCTTGGCCAGTAGCACTCCATTCCGGAGG +
Preference number: 6 (lower is better)
Translates to: IFFRGTTEGAKQ*PSLASSTPFRR
Trigger: CCTCCGGAATGGAGTGCTACTGGCCAAGCTGGGCCACTGTTTTGCACCCTCTGTGGTCCCCCTGAAGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp GCCAGGATGCCCCCGATCTTGCTGAAGGCCGGTAACTaGAGGCCATATTTGGCCAGTTCAGAGGCGATGTTG +
Preference number: 6 (lower is better)
Translates to: ARMPPILLKAGN*RPYLASSEAML
Trigger: CAACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CGTCATGATTCCTGGCATTGGCCGCCTTCTCCATCTTaGCTAGGGCCAGCAGCTCTTGGTAGACAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: RHDSWHWPPSPS*LGPAALGRQLP
Trigger: TGGCAGCTGTCTACCAAGAGCTGCTGGCCCTAGCCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp AGCAGCAGGGCAGACAGAGTCTTTTCAGGACAGCCCTaGTCCAGAGCCTCATTGATGAGGCTGATGGCGAGG +
Preference number: 6 (lower is better)
Translates to: SSRADRVFSGQP*SRASLMRLMAR
Trigger: CCTCGCCATCAGCCTCATCAATGAGGCTCTGGACCAGGGCTGTCCTGAAAAGACTCTGTCTGCCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CATTGCGGTAGAACCTCACCACCAGTCTCACCACTGTaGGGTTGCCTGTCACCACATCCTGGGGCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: HCGRTSPPVSPL*GCLSPHPGAVP
Trigger: TGGAACAGCCCCAGGATGTGGTGACAGGCAACCCCACAGTGGTGAGACTGGTGGTGAGGTTCTACCGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp GTCAGGATCTCTTCCAGGGACTCCCCAGGGTGGAACTaGATGAGGTCGGCCAGCATCTGTTTGGTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: VRISSRDSPGWN*MRSASICLVLR
Trigger: TCTGAGCACCAAACAGATGCTGGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCTGGAAGAGATCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp CCGATGTGGGCTACCGCAGAGAGCCAAAAGTTGATGTaGTCCGTGTGCCGGAAATGCAAGCCAGTCGCCTGG +
Preference number: 6 (lower is better)
Translates to: PMWATAESQKLM*SVCRKCKPVAW
Trigger: CCAGGCGACTGGCTTGCATTTCCGGCACACGGACAACATCAACTTTTGGCTCTCTGCGGTAGCCCACATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp AAGGTGACCAGAGTGTCCTCTACCACCCCTCGCTCCACGGCATCATaGATGGCCAGAATAGCTGCATGGACTGCAGCCTCATCGGCTGAA +
Preference number: 6 (lower is better)
Translates to: KVTRVSSTTPRSTAS*MARIAAWTAASSAE
Trigger: TTCAGCCGATGAGGCTGCAGTCCATGCAGCTATTCTGGCCATCAATGATGCCGTGGAGCGAGGGGTGGTAGAGGACACTCTGGTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GGCCAGAATAGCTGCATGGACTGCAGCCTCATCGGCTaGAAACTCATTGGCCAGGATGCCCCCGATCTTGCT +
Preference number: 6 (lower is better)
Translates to: GQNSCMDCSLIG*KLIGQDAPDLA
Trigger: AGCAAGATCGGGGGCATCCTGGCCAATGAGTTTTCAGCCGATGAGGCTGCAGTCCATGCAGCTATTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GATGGCTGCGCTGTCCAGTCTGGGCCTCCTCCTGGTTaGTCCAGCTCTTATAGATGTGGACAGGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: DGCAVQSGPPPG*SSSYRCGQGLC
Trigger: ACACAGACCCTGTCCACATCTATAAGAGCTGGATCAACCAGGAGGAGGCCCAGACTGGACAGCGCAGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp GGTTCTCGAAGATTCCCCAGGAGAGCATTGGGATTCTaGAAGGTGACCAGAGTGTCCTCTACCACCCCTCGC +
Preference number: 6 (lower is better)
Translates to: GSRRFPRRALGF*KVTRVSSTTPR
Trigger: GCGAGGGGTGGTAGAGGACACTCTGGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAATCTTCGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp AGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCACATaGCCGTCTGTGGCTATGTTGTCCCCAATGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SVRDTSSLLRST*PSVAMLSPMRS
Trigger: TGACCTCATTGGGGACAACATAGCCACAGACGGGCATGTGGACCTGAGCAGGCTCGAAGTGTCCCTGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp AGAGTGTCCTCTACCACCCCTCGCTCCACGGCATCATaGATGGCCAGAATAGCTGCATGGACTGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: RVSSTTPRSTAS*MARIAAWTAAS
Trigger: TGAGGCTGCAGTCCATGCAGCTATTCTGGCCATCAATGATGCCGTGGAGCGAGGGGTGGTAGAGGACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp ACGGTGTCAGCAGCCACTCCCCTCCGGATGGCTTTGTaGATCCTCCACACAGCCTGGAGCATAGTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: TVSAATPLRMAL*ILHTAWSIVCS
Trigger: AGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGGAGTGGCTGCTGACACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp TTCACGGTGTCAGCAGCCACTCCCCTCCGGATGGCTTaGTTGATCCTCCACACAGCCTGGAGCATAGTTTGC +
Preference number: 6 (lower is better)
Translates to: FTVSAATPLRMA*LILHTAWSIVC
Trigger: GCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGGAGTGGCTGCTGACACCGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp AGGATGCCCCCGATCTTGCTGAAGGCCGGTAACTGGAGGCCATATTaGGCCAGTTCAGAGGCGATGTTGCCGAGTTCCTCAGCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: RMPPILLKAGNWRPY*ASSEAMLPSSSAVN
Trigger: ATTCACAGCTGAGGAACTCGGCAACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp ATGAGCTCCTTCACGGTGTCAGCAGCCACTCCCCTCCGGATGGCTTaGTTGATCCTCCACACAGCCTGGAGCATAGTTTGCTCTTCATCC +
Preference number: 6 (lower is better)
Translates to: MSSFTVSAATPLRMA*LILHTAWSIVCSSS
Trigger: GGATGAAGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCCATCCGGAGGGGAGTGGCTGCTGACACCGTGAAGGAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp CTGTGTGTGCCGATGAGCTCCCCTACAGTGATGTACACCATGGGTTaGGCCACAGCCACCATGTCTGAGTATTCATCGATGGCGAAGCGC +
Preference number: 6 (lower is better)
Translates to: LCVPMSSPTVMYTMG*ATATMSEYSSMAKR
Trigger: GCGCTTCGCCATCGATGAATACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACTGTAGGGGAGCTCATCGGCACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp AGGGACTCCCCAGGGTGGAACTGGATGAGGTCGGCCAGCATCTGTTaGGTGCTCAGAAGCAGACTTTGGTTGCTGTTGTGGTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: RDSPGWNWMRSASIC*VLRSRLWLLLWSAS
Trigger: AGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCATCCAGTTCCACCCTGGGGAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 72 bp TCCAGCTTCCAGAGCACGGTTAATCAGAACCACGGCTaGCAGCATCTCCACAGCCACAAAGAGCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SSFQSTVNQNHG*QHLHSHKELLL
Trigger: CAGGAGGAGCTCTTTGTGGCTGTGGAGATGCTGTCAGCCGTGGTTCTGATTAACCGTGCTCTGGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS TCA 72 bp GATGTACACCATGGGTTTGGCCACAGCCACCATGTCTaGGTATTCATCGATGGCGAAGCGCTCCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: DVHHGFGHSHHV*VFIDGEALLWL
Trigger: GAGCCAGAGGAGCGCTTCGCCATCGATGAATACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 72 bp GGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTGGTaGGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GQHLSPALQTCW*VSGTLRACSGP
Trigger: TGGACCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp AGGTGCAACATGAAGGCTGACATCTTCCAGGCCAGCTaGAGGAAGCAGCAGGGCAGACAGAGTCTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: RCNMKADIFQAS*RKQQGRQSLFR
Trigger: CCTGAAAAGACTCTGTCTGCCCTGCTGCTTCCTGCAGCTGGCCTGGAAGATGTCAGCCTTCATGTTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp GTGGTCTCTGGGAGGAAGATCGAAGGCAGACCGATGTaGGCTACCGCAGAGAGCCAAAAGTTGATGTTGTCC +
Preference number: 6 (lower is better)
Translates to: VVSGRKIEGRPM*ATAESQKLMLS
Trigger: GGACAACATCAACTTTTGGCTCTCTGCGGTAGCCCACATCGGTCTGCCTTCGATCTTCCTCCCAGAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CGCTCCACGGCATCATTGATGGCCAGAATAGCTGCATaGACTGCAGCCTCATCGGCTGAAAACTCATTGGCC +
Preference number: 6 (lower is better)
Translates to: RSTASLMARIAA*TAASSAENSLA
Trigger: GGCCAATGAGTTTTCAGCCGATGAGGCTGCAGTCCATGCAGCTATTCTGGCCATCAATGATGCCGTGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CATAGATGTCCTGCTCCTGACCATCGTCATGATTCCTaGCATTGGCCGCCTTCTCCATCTTGGCTAGGGCCA +
Preference number: 6 (lower is better)
Translates to: HRCPAPDHRHDS*HWPPSPSWLGP
Trigger: TGGCCCTAGCCAAGATGGAGAAGGCGGCCAATGCCAGGAATCATGACGATGGTCAGGAGCAGGACATCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp CATAGAAGATGGTTTTTGCATCTAGGCCCTGCAGTGTaGTCCGGAGCCTCAGCATCTCTGCCTTCCGCCGTT +
Preference number: 6 (lower is better)
Translates to: HRRWFLHLGPAV*SGASASLPSAV
Trigger: AACGGCGGAAGGCAGAGATGCTGAGGCTCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp CCGATCTTGCTGAAGGCCGGTAACTGGAGGCCATATTaGGCCAGTTCAGAGGCGATGTTGCCGAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: PILLKAGNWRPY*ASSEAMLPSSS
Trigger: TGAGGAACTCGGCAACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAGCAAGATCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp GCTGCCAGAGGTTCTCGAAGATTCCCCAGGAGAGCATaGGGATTCTGCAAGGTGACCAGAGTGTCCTCTACC +
Preference number: 6 (lower is better)
Translates to: AARGSRRFPRRA*GFCKVTRVSST
Trigger: GGTAGAGGACACTCTGGTCACCTTGCAGAATCCCAATGCTCTCCTGGGGAATCTTCGAGAACCTCTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp GTCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTaGGTTGCTGTTGTGGTCAGCATCTGTCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: VGQHLFGAQKQT*VAVVVSICLQP
Trigger: GGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp TGGTTGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTaGGTGAGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCACATGC +
Preference number: 6 (lower is better)
Translates to: WLLLWSASVSSPSNL*VSVRDTSSLLRSTC
Trigger: GCATGTGGACCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 72 bp CTGAAAACTCATTGGCCAGGATGCCCCCGATCTTGCTaGAGGCCGGTAACTGGAGGCCATATTTGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: LKTHWPGCPRSC*RPVTGGHIWPV
Trigger: AACTGGCCAAATATGGCCTCCAGTTACCGGCCTTCAGCAAGATCGGGGGCATCCTGGCCAATGAGTTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp TCTAGAAGTCTCACCAGGCCCAGCTCCTGTGATTTCTaGTCTCGGTCTGAAGTCAGCTGTTCCAGGTACCAG +
Preference number: 6 (lower is better)
Translates to: SRSLTRPSSCDF*SRSEVSCSRYQ
Trigger: CTGGTACCTGGAACAGCTGACTTCAGACCGAGAGCAGAAATCACAGGAGCTGGGCCTGGTGAGACTTCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp TCCTGGACCTGTTCATTGACCTGGCTCACAGCAGCCTaGAGGTCATTCCAGCTCAGGATGCCTCTATGTGTT +
Preference number: 6 (lower is better)
Translates to: SWTCSLTWLTAA*RSFQLRMPLCV
Trigger: AACACATAGAGGCATCCTGAGCTGGAATGACCTGCAGGCTGCTGTGAGCCAGGTCAATGAACAGGTCCAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS GCA 72 bp TTCTTGGTCAGCTTCTTGCAGTGGGAGACTACCTCCTaGAGGGTGATGCGGTTCTTGACGAGCAGACCAATC +
Preference number: 6 (lower is better)
Translates to: FLVSFLQWETTS*RVMRFLTSRPI
Trigger: GATTGGTCTGCTCGTCAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp ATTAGTGAGTGGTGTCGTCGAAGTGGCTCTGGTTTCTaGGTGTCACAGGCTTGGCGCCAACACATCAACCGA +
Preference number: 6 (lower is better)
Translates to: ISEWCRRSGSGF*VSQAWRQHINR
Trigger: TCGGTTGATGTGTTGGCGCCAAGCCTGTGACACCCAGAAACCAGAGCCACTTCGACGACACCACTCACTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp TCCGACAGTTGCTCCTTATTCTTCTTGGTCAGCTTCTaGCAGTGGGAGACTACCTCCTGCAGGGTGATGCGG +
Preference number: 6 (lower is better)
Translates to: SDSCSLFFLVSF*QWETTSCRVMR
Trigger: CCGCATCACCCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCAACTGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp TTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTaGGTGAGTGTCAGGGACACTTCGAGCCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LWSASVSSPSNL*VSVRDTSSLLR
Trigger: CCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp CTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTaGTTGGTGAGTGTCAGGGACACTTCGAGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LLWSASVSSPSN*LVSVRDTSSLL
Trigger: GAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp CTTTGGTTGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTaGTTGGTGAGTGTCAGGGACACTTCGAGCCTGCTCAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: LWLLLWSASVSSPSN*LVSVRDTSSLLRST
Trigger: TGTGGACCTGAGCAGGCTCGAAGTGTCCCTGACACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp GGCTCACAGCAGCCTGCAGGTCATTCCAGCTCAGGATaGCTCTATGTGTTCCTTGAAACTGCTGAACCTTCA +
Preference number: 6 (lower is better)
Translates to: GSQQPAGHSSSG*LYVFLETAEPS
Trigger: TGAAGGTTCAGCAGTTTCAAGGAACACATAGAGGCATCCTGAGCTGGAATGACCTGCAGGCTGCTGTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp GGCTTTGTTGATCCTCCACACAGCCTGGAGCATAGTTaGCTCTTCATCCCCCTTCTCATTGGCTACAGCCAC +
Preference number: 6 (lower is better)
Translates to: GFVDPPHSLEHS*LFIPLLIGYSH
Trigger: GTGGCTGTAGCCAATGAGAAGGGGGATGAAGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp TCTACCTGGGCTAGGCCAGTTGCGGGATTCACTAGATaGTCCCAAAAGGCACAGACATCTCCAGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: STWARPVAGFTR*SQKAQTSPASR
Trigger: TCTGGAAGCTGGAGATGTCTGTGCCTTTTGGGACAATCTAGTGAATCCCGCAACTGGCCTAGCCCAGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp CCGATGAGCTCCCCTACAGTGATGTACACCATGGGTTaGGCCACAGCCACCATGTCTGAGTATTCATCGATG +
Preference number: 6 (lower is better)
Translates to: PMSSPTVMYTMG*ATATMSEYSSM
Trigger: CATCGATGAATACTCAGACATGGTGGCTGTGGCCAAACCCATGGTGTACATCACTGTAGGGGAGCTCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp AGCAGCCTGCAGGTCATTCCAGCTCAGGATGCCTCTATGTGTTCCTaGAAACTGCTGAACCTTCACCAGGGCATCAAAGTAACGTTGGGC +
Preference number: 6 (lower is better)
Translates to: SSLQVIPAQDASMCS*KLLNLHQGIKVTLG
Trigger: GCCCAACGTTACTTTGATGCCCTGGTGAAGGTTCAGCAGTTTCAAGGAACACATAGAGGCATCCTGAGCTGGAATGACCTGCAGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp CTGGATGAGGTCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTaGGTTGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTT +
Preference number: 6 (lower is better)
Translates to: LDEVGQHLFGAQKQT*VAVVVSICLQPFKL
Trigger: AAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp ATCATCATGTCCGACAGTTGCTCCTTATTCTTCTTGGTCAGCTTCTaGCAGTGGGAGACTACCTCCTGCAGGGTGATGCGGTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: IIMSDSCSLFFLVSF*QWETTSCRVMRFLT
Trigger: CGTCAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCAACTGTCGGACATGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp TCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTTGGTTGCTGTaGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: SASICLVLRSRLWLL*WSASVSSPSNLLVS
Trigger: ACTCACCAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp ATGAGGTCGGCCAGCATCTGTTTGGTGCTCAGAAGCAGACTTTGGTaGCTGTTGTGGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: MRSASICLVLRSRLW*LLWSASVSSPSNLL
Trigger: CAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACAGATGCTGGCCGACCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp ACTCTTGGGTTTGGGGGCCAGGTGGTCAAGGCAGGCCTGGATGTATaGGTTGTAGTAGTCACCCTGTTCCTCATAGAAGATGGTTTTTGC +
Preference number: 6 (lower is better)
Translates to: TLGFGGQVVKAGLDV*VVVVTLFLIEDGFC
Trigger: GCAAAAACCATCTTCTATGAGGAACAGGGTGACTACTACAACCAATACATCCAGGCCTGCCTTGACCACCTGGCCCCCAAACCCAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp GCTTTGTTGATCCTCCACACAGCCTGGAGCATAGTTTaGTCTTCATCCCCCTTCTCATTGGCTACAGCCACA +
Preference number: 6 (lower is better)
Translates to: ALLILHTAWSIV*SSSPFSLATAT
Trigger: TGTGGCTGTAGCCAATGAGAAGGGGGATGAAGAGCAAACTATGCTCCAGGCTGTGTGGAGGATCAACAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp TCCTCAGCTGTGAATTTCACTTTCCCATACAGGTCATaGATCTGTGGAGCCAATCCCAGCCGGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SSAVNFTFPYRS*ICGANPSRKRK
Trigger: CTTCCTCTTCCGGCTGGGATTGGCTCCACAGATCCATGACCTGTATGGGAAAGTGAAATTCACAGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp AGTTGCTCCTTATTCTTCTTGGTCAGCTTCTTGCAGTaGGAGACTACCTCCTGCAGGGTGATGCGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SCSLFFLVSFLQ*ETTSCRVMRFL
Trigger: CAAGAACCGCATCACCCTGCAGGAGGTAGTCTCCCACTGCAAGAAGCTGACCAAGAAGAATAAGGAGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp TGTAGTAGTCACCCTGTTCCTCATAGAAGATGGTTTTaGCATCTAGGCCCTGCAGTGTGGTCCGGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: CSSHPVPHRRWF*HLGPAVWSGAS
Trigger: TGAGGCTCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATGAGGAACAGGGTGACTACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp TTTTCTTCTTCTACCTGGGCTAGGCCAGTTGCGGGATTCACTAGATaGTCCCAAAAGGCACAGACATCTCCAGCTTCCAGAGCACGGTTA +
Preference number: 6 (lower is better)
Translates to: FSSSTWARPVAGFTR*SQKAQTSPASRARL
Trigger: TAACCGTGCTCTGGAAGCTGGAGATGTCTGTGCCTTTTGGGACAATCTAGTGAATCCCGCAACTGGCCTAGCCCAGGTAGAAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp TGTATTGGTTGTAGTAGTCACCCTGTTCCTCATAGAAGATGGTTTTaGCATCTAGGCCCTGCAGTGTGGTCCGGAGCCTCAGCATCTCTG +
Preference number: 6 (lower is better)
Translates to: CIGCSSHPVPHRRWF*HLGPAVWSGASASL
Trigger: CAGAGATGCTGAGGCTCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATGAGGAACAGGGTGACTACTACAACCAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS GCA 72 bp CACACCCAGGAACTTGGCATTGACGAAAAACCTTCCTaGCTCGTCTCCAGGAGTGATGTCAAAGATGACGTT +
Preference number: 6 (lower is better)
Translates to: HTQELGIDEKPS*LVSRSDVKDDV
Trigger: AACGTCATCTTTGACATCACTCCTGGAGACGAGGCAGGAAGGTTTTTCGTCAATGCCAAGTTCCTGGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp TGTGAATTTCACTTTCCCATACAGGTCATGGATCTGTaGAGCCAATCCCAGCCGGAAGAGGAAGAGACTGAG +
Preference number: 6 (lower is better)
Translates to: CEFHFPIQVMDL*SQSQPEEEETE
Trigger: CTCAGTCTCTTCCTCTTCCGGCTGGGATTGGCTCCACAGATCCATGACCTGTATGGGAAAGTGAAATTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp GGAGGTTCCCAACCACCTTATAGATGTCCCTCTCGGTaGCATTGGGGAACTTCTTCTCCAAGGTTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: GGSQPPYRCPSR*HWGTSSPRLFS
Trigger: TGAAAACAACCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGGACATCTATAAGGTGGTTGGGAACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp AACTGGAGGCCATATTTGGCCAGTTCAGAGGCGATGTaGCCGAGTTCCTCAGCTGTGAATTTCACTTTCCCA +
Preference number: 6 (lower is better)
Translates to: NWRPYLASSEAM*PSSSAVNFTFP
Trigger: TGGGAAAGTGAAATTCACAGCTGAGGAACTCGGCAACATCGCCTCTGAACTGGCCAAATATGGCCTCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp GTTGGGCATTTTCTTCTTCTACCTGGGCTAGGCCAGTaGCGGGATTCACTAGATTGTCCCAAAAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: VGHFLLLPGLGQ*RDSLDCPKRHR
Trigger: TCTGTGCCTTTTGGGACAATCTAGTGAATCCCGCAACTGGCCTAGCCCAGGTAGAAGAAGAAAATGCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 72 bp CCCTCTCGGTGGCATTGGGGAACTTCTTCTCCAAGGTaGTTTTCAGGACTTTGGCCATATACCTCATCCCAT +
Preference number: 6 (lower is better)
Translates to: PSRWHWGTSSPR*FSGLWPYTSSH
Trigger: ATGGGATGAGGTATATGGCCAAAGTCCTGAAAACAACCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp CAAAGTAACGTTGGGCATTTTCTTCTTCTACCTGGGCTAGGCCAGTaGCGGGATTCACTAGATTGTCCCAAAAGGCACAGACATCTCCAG +
Preference number: 6 (lower is better)
Translates to: QSNVGHFLLLPGLGQ*RDSLDCPKRHRHLQ
Trigger: CTGGAGATGTCTGTGCCTTTTGGGACAATCTAGTGAATCCCGCAACTGGCCTAGCCCAGGTAGAAGAAGAAAATGCCCAACGTTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CCA 72 bp TCCCAACCACCTTATAGATGTCCCTCTCGGTGGCATTaGGGAACTTCTTCTCCAAGGTTGTTTTCAGGACTT +
Preference number: 6 (lower is better)
Translates to: SQPPYRCPSRWH*GTSSPRLFSGL
Trigger: AAGTCCTGAAAACAACCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGGACATCTATAAGGTGGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp TGTTTGGTGCTCAGAAGCAGACTTTGGTTGCTGTTGTaGTCAGCATCTGTCTCCAGCCCTTCAAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: CLVLRSRLWLLL*SASVSSPSNLL
Trigger: CAACAAGTTTGAAGGGCTGGAGACAGATGCTGACCACAACAGCAACCAAAGTCTGCTTCTGAGCACCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CCA 72 bp ATTGGTTGTAGTAGTCACCCTGTTCCTCATAGAAGATaGTTTTTGCATCTAGGCCCTGCAGTGTGGTCCGGA +
Preference number: 6 (lower is better)
Translates to: IGCSSHPVPHRR*FLHLGPAVWSG
Trigger: TCCGGACCACACTGCAGGGCCTAGATGCAAAAACCATCTTCTATGAGGAACAGGGTGACTACTACAACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp CAGGTCATTCCAGCTCAGGATGCCTCTATGTGTTCCTaGAAACTGCTGAACCTTCACCAGGGCATCAAAGTA +
Preference number: 6 (lower is better)
Translates to: QVIPAQDASMCS*KLLNLHQGIKV
Trigger: TACTTTGATGCCCTGGTGAAGGTTCAGCAGTTTCAAGGAACACATAGAGGCATCCTGAGCTGGAATGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000195465.2
CDS CAA 90 bp TCGGTGGCATTGGGGAACTTCTTCTCCAAGGTTGTTTTCAGGACTTaGGCCATATACCTCATCCCATACGGAATGTGGTCCACAGATGAA +
Preference number: 6 (lower is better)
Translates to: SVALGNFFSKVVFRT*AIYLIPYGMWSTDE
Trigger: TTCATCTGTGGACCACATTCCGTATGGGATGAGGTATATGGCCAAAGTCCTGAAAACAACCTTGGAGAAGAAGTTCCCCAATGCCACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 90 bp TATAGATGTCCCTCTCGGTGGCATTGGGGAACTTCTTCTCCAAGGTaGTTTTCAGGACTTTGGCCATATACCTCATCCCATACGGAATGT +
Preference number: 6 (lower is better)
Translates to: YRCPSRWHWGTSSPR*FSGLWPYTSSHTEC
Trigger: ACATTCCGTATGGGATGAGGTATATGGCCAAAGTCCTGAAAACAACCTTGGAGAAGAAGTTCCCCAATGCCACCGAGAGGGACATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS TCA 72 bp CATATACCTCATCCCATACGGAATGTGGTCCACAGATaGACTGATGGCGACAAAGAACTTCTCAGTCAAGGT +
Preference number: 6 (lower is better)
Translates to: HIPHPIRNVVHR*TDGDKELLSQG
Trigger: ACCTTGACTGAGAAGTTCTTTGTCGCCATCAGTTCATCTGTGGACCACATTCCGTATGGGATGAGGTATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp CGTTTCTCTCTGCTCAGTGACTTTAATCCCTTCTGTTaGTCCAGGATCATCATGTCCGACAGTTGCTCCTTA +
Preference number: 6 (lower is better)
Translates to: RFSLLSDFNPFC*SRIIMSDSCSL
Trigger: TAAGGAGCAACTGTCGGACATGATGATCCTGGACAAACAGAAGGGATTAAAGTCACTGAGCAGAGAGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2
CDS CAA 72 bp TTGTTGAGCAGGAAGATGAGGAGATTGACGTTGACTTaGGCTTTGTTAAAGAGTTTCATGACAGCCACACCC +
Preference number: 6 (lower is better)
Translates to: LLSRKMRRLTLT*ALLKSFMTATP
Trigger: GGGTGTGGCTGTCATGAAACTCTTTAACAAAGCCAAAGTCAACGTCAATCTCCTCATCTTCCTGCTCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071812.11
ENSMUST00000194440.2