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Pregenerated sensors for IQGAP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021676

Ensembl transcript IDs: ENSMUST00000068603.8

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTCCCCTCAGCCCATCTTGTCTATCCCTCTaGTGCAGTATCCAATTATCAAAAAGGCACATGGCTACATTCTTC +
Preference number: 1 (lower is better)
Translates to: VCVCVCPLSPSCLSL*CSIQLSKRHMATFF
Trigger: GAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATACTGCAGCAGAGGGATAGACAAGATGGGCTGAGGGGACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
3UTR GCA 90 bp TGTGTGTGTGTGTGTCCCCTCAGCCCATCTTGTCTATCCCTCTGCTaGAGTATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGA +
Preference number: 1 (lower is better)
Translates to: CVCVCPLSPSCLSLC*SIQLSKRHMATFFR
Trigger: TCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATACTGCAGCAGAGGGATAGACAAGATGGGCTGAGGGGACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
3UTR-3UTR GCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCCCGAGGCAGTACCTGTaGCACAGTACTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVPRQYL*HSTVCV
Trigger: CACACACACAGTACTGTGGCACAGGTACTGCCTCGG...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
3UTR-3UTR TCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGACACTTATAAGCCGTaGTTCCAATCATGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVDTYKP*FQSCFQ
Trigger: TTGAAAACATGATTGGAATCACGGCTTATAAGTGTC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGAGTCAGCGTGCTCCCTaGCTGGTTCCGGGTCACATC +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSQRAP*LVPGHI
Trigger: GATGTGACCCGGAACCAGCCAGGGAGCACGCTGACT...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGGTGGGGCTTCTGAGTTaGTTCTGCACAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVVGLLS*FCTATR
Trigger: CCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCAC...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTGCCACCGATTTTGCTaGAAGCCGGCATCTGGATCC +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVCHRFC*KPASGS
Trigger: GGATCCAGATGCCGGCTTTCAGCAAAATCGGTGGCA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCTATGGTGGGGCTTCTaGGTTGGTTCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVLWWGF*VGSAQP
Trigger: TGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCAGCTTAGCCAGGTATaGAGGTTTGGTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVQLSQV*RFGLEE
Trigger: CTCCTCCAGACCAAACCTTCATACCTGGCTAAGCTG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCATCGGGAGCCACAATaGCTGGGTTCATATACCGGT +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVHREPQ*LGSYTG
Trigger: ACCGGTATATGAACCCAGCCATTGTGGCTCCCGATG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCCAGGACTTTGTCGGTaGCCTTCCTCAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVPGLCR*PSSGFQ
Trigger: TTGAAAACCTGAGGAAGGTCACCGACAAAGTCCTGG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGAGCAAATCCTGGATCTaGGGCGCAATCCCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSKSWI*GAIPSL
Trigger: TAAACTGGGGATTGCGCCCCAGATCCAGGATTTGCT...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCTTCTATCACTGCTTaGCTCTGCTTCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSSITA*LCFPSS
Trigger: GGAGGAAGGGAAGCAGAGCCAAGCAGTGATAGAAGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGGTACTGATGTTGCTTTaGATTTCTGCCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVVLMLL*ISAWVS
Trigger: GCTGACCCAGGCAGAAATTCAAAGCAACATCAGTAC...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGGGATGTAATCTGATGTaGCCTCCTCCACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVGCNLM*PPPQCP
Trigger: AGGACATTGTGGAGGAGGTCACATCAGATTACATCC...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTTCTGGTTTCTTCAGTaGAAGCAGTGTGTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVFWFLQ*KQCVLG
Trigger: CCCGAGAACACACTGCTTGCACTGAAGAAACCAGAA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGACACGTGTCCAGTCTaGTCCAGCGTCCGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRDTCPV*SSVRRF
Trigger: GAACCTGCGGACGCTGGAGCAGACTGGACACGTGTC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGAAAGGACTCCACCGTaGGCACCTCCCCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRERTPP*APPPET
Trigger: AGTCTCTGGGGGAGGTGCCCACGGTGGAGTCCTTTC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCTTGGTACTTGTTTTTaGAGGACACGTGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVLGTCF*RTRVQS
Trigger: AGACTGGACACGTGTCCTCCAAAAACAAGTACCAAG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
3UTR CAA 72 bp GTGTGTGTGTGTGTGTGTGTGTCCCCTCAGCCCATCTaGTCTATCCCTCTGCTGCAGTATCCAATTATCAAA +
Preference number: 4 (lower is better)
Translates to: VCVCVCVSPQPI*SIPLLQYPIIK
Trigger: TTTGATAATTGGATACTGCAGCAGAGGGATAGACAAGATGGGCTGAGGGGACACACACACACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCTTCTTCCAGTTCAGTaGTTGGTGGCAATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVLLPVQ*LVAILQ
Trigger: TTGAAGAATTGCCACCAACCACTGAACTGGAAGAAG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGATAGCTCTTAACCACTaGACAGTGTTATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVIALNH*TVLSVC
Trigger: ACACACAGATAACACTGTGCAGTGGTTAAGAGCTAT...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATTTCCCAGCAAATCCTaGATCTGGGGCGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRFPSKS*IWGAIP
Trigger: GGGGATTGCGCCCCAGATCCAGGATTTGCTGGGAAA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACTGCTCTCCAAGGCCTaGTTTAGCAGAGCAACGGCA +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRLLSKA*FSRATA
Trigger: TGCCGTTGCTCTGCTAAACCAGGCCTTGGAGAGCAG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATACTGGTGCCAGGAGCTaGCGCAGGGTGTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYTGARS*RRVFCP
Trigger: GGGACAGAACACCCTGCGCCAGCTCCTGGCACCAGT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATGGTTGGAGTTGATCTaGCCTCCGGCTGTCATGTCA +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRWLELI*PPAVMS
Trigger: TGACATGACAGCCGGAGGTCAGATCAACTCCAACCA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTCTCTTTCACCACTGGTaGCAGGAGCTGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLLFHHW*QELAQG
Trigger: ACCCTGCGCCAGCTCCTGGCACCAGTGGTGAAAGAG...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACTGGCTTCTCCAGTCTaGGTTTCCAGTTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRLASPV*VSSWFT
Trigger: GGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACAGCTTGTTGGAGGCTaGGTGTTGCAGAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRQLVGG*VLQNLC
Trigger: GCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTGCGTGCTCTAGTTCCTaGTGCCCAGTTGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLACSSS*CPVAGV
Trigger: GACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGC...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATCCATGTCTTTGGCGTaGTCTAGTTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRSMSLA*SSSCCP
Trigger: TGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCATCACTGCTTGGCTCTaGTTCCCTTCCTCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVITAWL*FPSSGV
Trigger: GACCCCGGAGGAAGGGAAGCAGAGCCAAGCAGTGAT...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGGCAATAGATCATCCTTaGTATGTTTTTCCGATCGTA +
Preference number: 4 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVAIDHP*YVFPIV
Trigger: TACGATCGGAAAAACATACCAAGGATGATCTATTGC...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGGTCCACCTTTGATTTaGTTTCTTCCTCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRGPPLI*FLPPAQ
Trigger: CTGCGCTGGAGGAAGAAATCAAATCAAAGGTGGACC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATAGATTTCAGTCAGCGTaGTCCCTGGCTGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYRFQSA*SLAGSG
Trigger: CCCGGAACCAGCCAGGGAGCACGCTGACTGAAATCT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACCTCAAACAGCTTGTTaGAGGCTGCGTGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRPQTAC*RLRVAE
Trigger: TTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTTCCTTCTCCAGCTGCTaGTTGGCCCTGATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLSFSSC*LALIFV
Trigger: GACGAAGATCAGGGCCAATCAGCAGCTGGAGAAGGA...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCTCCTTTGGTTGGAGTTaGTCTGACCTCCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVSFGWS*SDLRLS
Trigger: TGACAGCCGGAGGTCAGATCAACTCCAACCAAAGGA...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTACAGCCACGAGGTCACTaGTCTCCAAGGCCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLQPRGH*SPRPGL
Trigger: TAAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTG...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTGCTCTAGTTCCTGCTaGCCAGTTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYCSSSC*PVAGVS
Trigger: AGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATGCATCTTCTATCACTaGTTGGCTCTGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRCIFYH*LALLPF
Trigger: GAAGGGAAGCAGAGCCAAGCAGTGATAGAAGATGCA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTCTTCTTCTCGTAGCCTaGCTACCTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLLLLVA*LPPAPP
Trigger: AGGAGGAGCTGGAGGTAGCCAGGCTACGAGAAGAAG...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTTCTGGTACTCCTGTaGGAGGCTGTCGTCCACACA +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLFLVLL*EAVVHT
Trigger: TGTGTGGACGACAGCCTCTCACAGGAGTACCAGAAA...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTGGGCCTTGTCCTCAATaGTCTCTTTCACCACTGGTG +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLGPCPQ*SLSPLV
Trigger: CACCAGTGGTGAAAGAGATCATTGAGGACAAGGCCC...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGATCGAGGGAAGAAATaGTGGAGCCCAGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVDRGKK*WSPGLC
Trigger: ACAAAGTCCTGGGCTCCATCATTTCTTCCCTCGATC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTACGGCTGTCATGTCAATaGTGTCAAAGCCATCGGGAG +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLRLSCQ*CQSHRE
Trigger: CTCCCGATGGCTTTGACATCATTGACATGACAGCCG...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGTGGCAATGGCATCCTaGTGTTCCAGCAGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVVAMAS*CSSRSK
Trigger: TTTACTCCTGCTGGAACATCAGGATGCCATTGCCAC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGCCTCATTGATGGCTTaGTGTATCTCATCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVASLMA*CISSSQ
Trigger: CTGGCTGGATGAGATACAGCAAGCCATCAATGAGGC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAGTCATTGGGGTCAACTaGTCCTTCCCCGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLVIGVN*SFPEKG
Trigger: TCCTTTCTCGGGGAAGGAGCAGTTGACCCCAATGAC...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACCCATGAACCTTCACTaGACTCATTGTCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRPMNLH*THCQSL
Trigger: CAAAGACTGACAATGAGTCCAGTGAAGGTTCATGGG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGTCTGCGTTTCCAGTTaGTTCACCCAAGCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVVCVSS*FTQALY
Trigger: GTACAAGGCTTGGGTGAACCAACTGGAAACGCAGAC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTGCCGTGTACCTCACTaGCTTCACTCTCTTCGTTCC +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYCRVPH*LHSLRS
Trigger: GGAACGAAGAGAGTGAAGCCAGTGAGGTACACGGCA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTCCACGTTGGCCTCATTaGTGGCTTGCTGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLPRWPH*WLAVSH
Trigger: ATGAGATACAGCAAGCCATCAATGAGGCCAACGTGG...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGACAAGCAAGTCTTCTaGAGCAGACCACAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYDKQVF*SRPQLL
Trigger: GAGAAGCTGTGGTCTGCTTCAGAAGACTTGCTTGTC...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGCTGCTGATTGGCCCTaGTCTTCGTCACTACTTCTT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYAADWP*SSSLLL
Trigger: AAGAAGTAGTGACGAAGATCAGGGCCAATCAGCAGC...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTGTTGCTTTGAATTTCTaGCTGGGTCAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLVALNF*LGQQLL
Trigger: GAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAAC...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACAGCTTAAGGTATCTTaGCCTTGGGATAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRQLKVS*PWDNAS
Trigger: AGAAGCATTATCCCAAGGGCAAGATACCTTAAGCTG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTCTTCAGAGGGTTCCCTaGGTCGATGGCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLLQRVP*VDGFID
Trigger: ATCAATGAAGCCATCGACGCAGGGAACCCTCTGAAG...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATGTAACCCATTGCTTTaGTCTGTTCTCATCCACGTT +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRCNPLL*SVLIHV
Trigger: AACGTGGATGAGAACAGAGCAAAGCAATGGGTTACA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTAGAACTTGGCTAACTTaGCGAGGTAGACCCCATTCC +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLRTWLT*RGRPHS
Trigger: GGAATGGGGTCTACCTCGCCAAGTTAGCCAAGTTCT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCTACCTGGTCCACCTTTaGTTTGATTTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVYLVHL*FDFFLQ
Trigger: CTGGAGGAAGAAATCAAATCAAAGGTGGACCAGGTA...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTTTTTGGTCTTTATCATaGGGCTTCTGCCATCGACGG +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLFWSLS*GFCHRR
Trigger: CCGTCGATGGCAGAAGCCTCATGATAAAGACCAAAA...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACGTTCCTTTGGGTTCTaGTTTTCCATCCAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRRSFGF*FSIQFN
Trigger: ATTAAACTGGATGGAAAAGCAGAACCCAAAGGAACG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCCTCTCTTCGTTCCTTTaGGTTCTGCTTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVLSSFL*VLLFHP
Trigger: TGGATGGAAAAGCAGAACCCAAAGGAACGAAGAGAG...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTCTCATTGTCAGTCTTTaGCTCTTTCGCCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLLIVSL*LFRLHK
Trigger: CTTGTGAAGGCGAAAGAGTCAAAGACTGACAATGAG...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTAGAAAGCCTGGATTTTaGCCACGCTCTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLRKPGF*PRSLFV
Trigger: AACAAACAGAGAGCGTGGTCAAAATCCAGGCTTTCT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCCAGCAGTCCAATCTTaGTGTCCATTAGGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYPAVQS*CPLGSS
Trigger: ACTTGAACCTAATGGACATCAAGATTGGACTGCTGG...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAACATCACACGCTTCTTaGAAATATTTCCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRTSHAS*KYFLNS
Trigger: GGAATTCAGGAAATATTTTCAAGAAGCGTGTGATGT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATCGGTTTTGGAGAGTTaGTTTAATGTGTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRSVLES*FNVFSL
Trigger: CAAGGAAAACACATTAAATCAACTCTCCAAAACCGA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCCTTGGCAATCTCGTTaGGAATGTCTTGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYPWQSR*ECLGTC
Trigger: ACAAGTACCAAGACATTCTCAACGAGATTGCCAAGG...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCAAGATAACTCTTCCTTaGTGTCACCATTCGGAACCA +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVKITLP*CHHSEP
Trigger: TGGTTCCGAATGGTGACAGCAAGGAAGAGTTATCTT...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCTGCCTTCTTATTAAGTaGGTTCAGGGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVCLLIK*VQGLLK
Trigger: CTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCA...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTTTTGAAGGTCATCTATaGCCAACAGGACGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLFEGHL*PTGRLC
Trigger: ACAAAGGCGTCCTGTTGGGCATAGATGACCTTCAAA...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAACTATGTCTTGTACCTaGTCCACCTTTGATTTGATT +
Preference number: 4 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRTMSCT*STFDLI
Trigger: AATCAAATCAAAGGTGGACCAGGTACAAGACATAGT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCTTTTCAGTGGCAATaGCATCCTGATGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLSFQWQ*HPDVPA
Trigger: TGCTGGAACATCAGGATGCCATTGCCACTGAAAAGA...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTACCCAAGAGCCTTCTTTaGAATCCGTGTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLPKSLL*NPCCNS
Trigger: ACTATTACAACACGGATTCCAAAGAAGGCTCTTGGG...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAGTAGATCTTCTTCTCTaGTACCATTTTTGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLVDLLL*YHFWSE
Trigger: TTCGCTCCAAAAATGGTATCAGAGAAGAAGATCTAC...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCTTGAAAATATTTCCTaGATTCCTGGTAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYLENIS*IPGRSL
Trigger: CAGAGACCTACCAGGAATTCAGGAAATATTTTCAAG...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTCTGGGAGTATGTTATaGATATTGCTAGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYSGSML*ILLGED
Trigger: GTCTTCTCCTAGCAATATCCATAACATACTCCCAGA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCCTTGTTGGCACATTCTaGGAGTATGTTATGGATATT +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVLVGTF*EYVMDI
Trigger: AATATCCATAACATACTCCCAGAATGTGCCAACAAG...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR TCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTCTGTTTCTGGAGGTTaGAGAGTTCATTTTGATACA +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYSVSGG*RVHFDT
Trigger: TGTATCAAAATGAACTCTTCAACCTCCAGAAACAGA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGATGTGTTCTGTTTCTaGAGGTTGAAGAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYDVFCF*RLKSSF
Trigger: AAATGAACTCTTCAACCTCCAGAAACAGAACACATC...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATAAGGTATCTTGCCCTTaGGATAATGCTTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYKVSCP*DNASCL
Trigger: TAAACAAGAAGCATTATCCCAAGGGCAAGATACCTT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATATCATAGTACTTGTTaGCACATTCTGGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLYHSTC*HILGVC
Trigger: ACATACTCCCAGAATGTGCCAACAAGTACTATGATA...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CCA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCAGTTCTTCAGTACTTTaGCTATATACCTCAATCCAT +
Preference number: 4 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVSSSVL*LYTSIH
Trigger: ATGGATTGAGGTATATAGCCAAAGTACTGAAGAACT...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR GCA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATATCTTCATAAAACGCTaGCTTCTTATTAAGTGCGTT +
Preference number: 4 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYIFIKR*LLIKCV
Trigger: AACGCACTTAATAAGAAGGCAGCGTTTTATGAAGAT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp GGTGTTAATGACCAGGGCCTTGTCCTCAATGATCTCTTTCACCACTaGTGCCAGGAGCTGGCGCAGGGTGTTCTGTCCCCGGGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: GVNDQGLVLNDLFHH*CQELAQGVLSPGAS
Trigger: AGAGGCGCCCGGGGACAGAACACCCTGCGCCAGCTCCTGGCACCAGTGGTGAAAGAGATCATTGAGGACAAGGCCCTGGTCATTAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 90 bp TTGGAGGACACGTGTCCAGTCTGCTCCAGCGTCCGCAGGTTCCTCTaGATCTTCCTCTTCTTTTGCTCGAGGGGCAGGCGTGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LEDTCPVCSSVRRFL*IFLFFCSRGRRASS
Trigger: AGAAGATGCACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATTCAGAGGAACCTGCGGACGCTGGAGCAGACTGGACACGTGTCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp ACAACGGCACGGCTCTCCATGTCTTTGGCGTGCTCTAGTTCCTGCTaGCCAGTTGCTGGGGTCTCTAAGATTTCAGTCAGCGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TTARLSMSLACSSSC*PVAGVSKISVSVLP
Trigger: AGGGAGCACGCTGACTGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGAGAGCCGTGCCGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp GGGGTCCTGGAGTCTACAACGGCACGGCTCTCCATGTCTTTGGCGTaGTCTAGTTCCTGCTGCCCAGTTGCTGGGGTCTCTAAGATTTCA +
Preference number: 5 (lower is better)
Translates to: GVLESTTARLSMSLA*SSSCCPVAGVSKIS
Trigger: TGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGAGAGCCGTGCCGTTGTAGACTCCAGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp TCTACAACGGCACGGCTCTCCATGTCTTTGGCGTGCTCTAGTTCCTaGTGCCCAGTTGCTGGGGTCTCTAAGATTTCAGTCAGCGTGCTC +
Preference number: 5 (lower is better)
Translates to: STTARLSMSLACSSS*CPVAGVSKISVSVL
Trigger: GAGCACGCTGACTGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGAGAGCCGTGCCGTTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp CTGAGTTGGTTCTGCACAGCCACGAGGTCACTGCTCTCCAAGGCCTaGTTTAGCAGAGCAACGGCAGACAACATTTCCACGGCAATCAGG +
Preference number: 5 (lower is better)
Translates to: LSWFCTATRSLLSKA*FSRATADNISTAIR
Trigger: CCTGATTGCCGTGGAAATGTTGTCTGCCGTTGCTCTGCTAAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp TGTGCCTCATCCAGATTGTTGAAGCCTATGGTGGGGCTTCTGAGTTaGTTCTGCACAGCCACGAGGTCACTGCTCTCCAAGGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: CASSRLLKPMVGLLS*FCTATRSLLSKAWF
Trigger: AAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAATCTGGATGAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCGCCCTCAAACAGCTaGTTGGAGGCTGCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSPSNS*LEAACC
Trigger: GCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp TCATCCAGATTGTTGAAGCCTATGGTGGGGCTTCTGAGTTGGTTCTaGACAGCCACGAGGTCACTGCTCTCCAAGGCCTGGTTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSRLLKPMVGLLSWF*TATRSLLSKAWFSR
Trigger: TCTGCTAAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAATCTGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTGGTTCACCCAAGCCTaGTACACCTCCACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVWFTQA*YTSTGL
Trigger: CAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCCCTCAAACAGCTTGTaGGAGGCTGCGTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVPSNSL*EAACCR
Trigger: TCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp GGAGCCCAGGACTTTGTCGGTGACCTTCCTCAGGTTTTCAATAGATaGCTCCAGTTTATTCTTCACCTCCGGGTATGTCAGGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GAQDFVGDLPQVFNR*LQFILHLRVCQGLL
Trigger: GAGCAAGCCCTGACATACCCGGAGGTGAAGAATAAACTGGAGGCATCTATTGAAAACCTGAGGAAGGTCACCGACAAAGTCCTGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp CTCGCCCTCAAACAGCTTGTTGGAGGCTGCGTGTTGCAGAACCTTTaGCACAGATCCCAAGTTTCTCCTTTGGTTGGAGTTGATCTGACC +
Preference number: 5 (lower is better)
Translates to: LALKQLVGGCVLQNL*HRSQVSPLVGVDLT
Trigger: GGTCAGATCAACTCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp ATACATAACAGCAGCAAAGGGATAGACAGCTGGCAGCTGGGCTTCTaGTTTCTTCAGTGCAAGCAGTGTGTTCTCGGGGTCACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: IHNSSKGIDSWQLGF*FLQCKQCVLGVTFL
Trigger: CAGGAAGGTGACCCCGAGAACACACTGCTTGCACTGAAGAAACCAGAAGCCCAGCTGCCAGCTGTCTATCCCTTTGCTGCTGTTATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCCTTGTTAGGGTCATaGGGGTCAACTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSLLGS*GSTAPS
Trigger: GGAAGGAGCAGTTGACCCCAATGACCCTAACAAGGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 90 bp ATGTGGTCCACAGCAGCCATCCTGTTGACGGTACTGATGTTGCTTTaGATTTCTGCCTGGGTCAGCAGCTCCTCATACGCATCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: MWSTAAILLTVLMLL*ISAWVSSSSYASLS
Trigger: AGAGAGAGATGCGTATGAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAACATCAGTACCGTCAACAGGATGGCTGCTGTGGACCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCCACGTTGGCCTCATaGATGGCTTGCTGTATCTCA +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSTLAS*MACCIS
Trigger: TGAGATACAGCAAGCCATCAATGAGGCCAACGTGGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp AAATGCTCATTCTCGCCCTCAAACAGCTTGTTGGAGGCTGCGTGTTaGAGAACCTTTGCCACAGATCCCAAGTTTCTCCTTTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KCSFSPSNSLLEAAC*RTFATDPKFLLWLE
Trigger: CTCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp GGATTTTGTATAGAACAGAACATCCTGGTAGTGTTGGGCGCAGTCTaGGTCCACATCTCTGATATTAGCAGTGGGCAGCAGCAAGGTATC +
Preference number: 5 (lower is better)
Translates to: GFCIEQNILVVLGAV*VHISDISSGQQQGI
Trigger: GATACCTTGCTGCTGCCCACTGCTAATATCAGAGATGTGGACCCAGACTGCGCCCAACACTACCAGGATGTTCTGTTCTATACAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAGCCGTAGCGGGGCCGTaGCAACGACGGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLAVAGP*QRRQLF
Trigger: GAAGAGCTGCCGTCGTTGCAACGGCCCCGCTACGGC...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGGTGGGGCTTCTGAGTaGGTTCTGCACAGCCACGAG +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRGGASE*VLHSHE
Trigger: CTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGGCAGTTTTGAAGAGCTaGAGCAACAGGTATTCTTCC +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVAVLKS*SNRYSS
Trigger: GGAAGAATACCTGTTGCTCAAGCTCTTCAAAACTGC...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCCTTGGCAATCTCGTaGAGAATGTCTTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSLAIS*RMSWYL
Trigger: CAAGTACCAAGACATTCTCAACGAGATTGCCAAGGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp CCGTGGCATCGGGGAATTTCTCACGGATCGAGTTCTTCAGTACTTTaGCTATATACCTCAATCCATAAGGCAGCAGATCGAGGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: PWHRGISHGSSSSVL*LYTSIHKAADRGKK
Trigger: TTTCTTCCCTCGATCTGCTGCCTTATGGATTGAGGTATATAGCCAAAGTACTGAAGAACTCGATCCGTGAGAAATTCCCCGATGCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp TGTTCATTGATGACAAATGCTCATTCTCGCCCTCAAACAGCTTGTTaGAGGCTGCGTGTTGCAGAACCTTTGCCACAGATCCCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: CSLMTNAHSRPQTAC*RLRVAEPLPQIPSF
Trigger: GAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCATCAATGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAAACATCCTGGTAGTGTaGGGCGCAGTCTGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRNILVV*GAVWVH
Trigger: GTGGACCCAGACTGCGCCCAACACTACCAGGATGTT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACGGGTATGTCAGGGCTaGCTCTGTGGTGACGTCGTA +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRRVCQG*LCGDVV
Trigger: TACGACGTCACCACAGAGCAAGCCCTGACATACCCG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp ATCCAAACACTCATTCACGTCAACGACCAGTGTAACCCATTGCTTTaGTCTGTTCTCATCCACGTTGGCCTCATTGATGGCTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IQTLIHVNDQCNPLL*SVLIHVGLIDGLLY
Trigger: ATACAGCAAGCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp TTTCTATCCAAACACTCATTCACGTCAACGACCAGTGTAACCCATTaGTTTGCTCTGTTCTCATCCACGTTGGCCTCATTGATGGCTTGC +
Preference number: 5 (lower is better)
Translates to: FLSKHSFTSTTSVTH*FALFSSTLASLMAC
Trigger: GCAAGCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTTGGATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTGCAATAGATCATCCTaGGTATGTTTTTCCGATCGT +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVCNRSS*VCFSDR
Trigger: ACGATCGGAAAAACATACCAAGGATGATCTATTGCA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCAAGTTAACACTGCGTaGGGGTTTCTTAGTGTTATA +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVQVNTA*GFLSVI
Trigger: TATAACACTAAGAAACCCCAACGCAGTGTTAACTTG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGCGAGTTTCTGGGATTTaGTATAGAACAGAACATCCT +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVRVSGI*YRTEHP
Trigger: AGGATGTTCTGTTCTATACAAAATCCCAGAAACTCG...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAGGGCAGGTCCCAAGGTaGTGGCCTCGAAGCGGACAA +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLGQVPR*WPRSGQ
Trigger: TTGTCCGCTTCGAGGCCACAACCTTGGGACCTGCCC...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ATTCAAATAAATGGTGCGGGTGAAGGTGGGGGTCTATACCTGCTGTCCACCGTGTCGATGATCAGCTTTTaGGTCTTTATCATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: IQINGAGEGGGLYLLSTVSMISF*VFIMRL
Trigger: AAGCCTCATGATAAAGACCAAAAAGCTGATCATCGA...CACGGTGGACAGCAGGTATAGACCCCCACCTTCACCCGCACCATTTATTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGTTCCTGCTGCCCAGTaGCTGGGGTCTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRVPAAQ*LGSLRF
Trigger: AAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAAC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 90 bp AGGTATCTAAAGTCTTCAGAGGGTTCCCTGCGTCGATGGCTTCATTaGTGTACCCGAGAACTACCATTCGGTCATTTTCTTCTTGAATCT +
Preference number: 5 (lower is better)
Translates to: RYLKSSEGSLRRWLH*CTRELPFGHFLLES
Trigger: AGATTCAAGAAGAAAATGACCGAATGGTAGTTCTCGGGTACATCAATGAAGCCATCGACGCAGGGAACCCTCTGAAGACTTTAGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp CTGTGCAGATATTCCTGGCGTTGTTTGAACCCCTTCCAGAAAGCCTaGATTTTGACCACGCTCTCTGTTTGTTCATATAAGAATGCTTTC +
Preference number: 5 (lower is better)
Translates to: LCRYSWRCLNPFQKA*ILTTLSVCSYKNAF
Trigger: GAAAGCATTCTTATATGAACAAACAGAGAGCGTGGTCAAAATCCAGGCTTTCTGGAAGGGGTTCAAACAACGCCAGGAATATCTGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp GGTAGTATAGGAGATTTCCAACAATCTTTAACAGCTCTTCTTCCGTaGCATCGGGGAATTTCTCACGGATCGAGTTCTTCAGTACTTTGG +
Preference number: 5 (lower is better)
Translates to: GSIGDFQQSLTALLP*HRGISHGSSSSVLW
Trigger: CCAAAGTACTGAAGAACTCGATCCGTGAGAAATTCCCCGATGCCACGGAAGAAGAGCTGTTAAAGATTGTTGGAAATCTCCTATACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAAGTCTGCGTTTCCAGTaGGTTCACCCAAGCCTTGTA +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRSLRFQ*VHPSLV
Trigger: TACAAGGCTTGGGTGAACCAACTGGAAACGCAGACT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 90 bp AGCAGCTCGTTCAGTAGGTCACTCTTTTCAGTGGCAATGGCATCCTaGTGTTCCAGCAGGAGTAAATGTGTATTGATGATTTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: SSSFSRSLFSVAMAS*CSSRSKCVLMISSM
Trigger: CATAGAAGAAATCATCAATACACATTTACTCCTGCTGGAACATCAGGATGCCATTGCCACTGAAAAGAGTGACCTACTGAACGAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 90 bp CTCTTTCGCCTTCACAAGGGTATCATAGTACTTGTTGGCACATTCTaGGAGTATGTTATGGATATTGCTAGGAGAAGACTTGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LFRLHKGIIVLVGTF*EYVMDIARRRLECS
Trigger: ACTGCACTCAAGTCTTCTCCTAGCAATATCCATAACATACTCCCAGAATGTGCCAACAAGTACTATGATACCCTTGTGAAGGCGAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGAGGAGGTAGAACAGTaGCTGGTAGGTCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVEEVEQ*LVGLQC
Trigger: ACACTGGAGACCTACCAGCAACTGTTCTACCTCCTC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAAAGCTGACAACCATCTaGATGACTGTAGGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRKLTTI*MTVGLP
Trigger: AGGCAACCCTACAGTCATCAAGATGGTTGTCAGCTT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATAATCTTCCTCTTCTTTaGCTCGAGGGGCAGGCGTGC +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYNLPLL*LEGQAC
Trigger: GCACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGATCTTGGTACTTGTTTTaGGAGGACACGTGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRSWYLF*EDTCPV
Trigger: GACTGGACACGTGTCCTCCAAAAACAAGTACCAAGA...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTACCCAACAGGACGCCTTaGTCATGTAGCTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLPNRTP*SCSFAA
Trigger: GGCAGCAAAGCTACATGACAAAGGCGTCCTGTTGGG...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTGGCCTCATTGATGGCTaGCTGTATCTCATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLGLIDG*LYLIQP
Trigger: TGGCTGGATGAGATACAGCAAGCCATCAATGAGGCC...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp ACACAAGTTAACACTGCGTTGGGGTTTCTTAGTGTTATAATGGTCTaGTTGGCCACTCCCTTTTCAATAGCCTCATTAATAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: TQVNTALGFLSVIMV*LATPFSIASLIAMT
Trigger: AGTCATAGCTATTAATGAGGCTATTGAAAAGGGAGTGGCCAAGCAGACCATTATAACACTAAGAAACCCCAACGCAGTGTTAACTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTCCACAGACAGTTCATaGGCCAGAATGCCACCGATT +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYSTDSS*ARMPPI
Trigger: AATCGGTGGCATTCTGGCCAATGAACTGTCTGTGGA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGTTATAATGGTCTGCTaGGCCACTCCCTTTTCAATA +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRVIMVC*ATPFSI
Trigger: TATTGAAAAGGGAGTGGCCAAGCAGACCATTATAAC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCTCCCAAGTTTCTCCTTaGGTTGGAGTTGATCTGACC +
Preference number: 5 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVSQVSP*VGVDLT
Trigger: GGTCAGATCAACTCCAACCAAAGGAGAAACTTGGGA...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGACTCGTTGAGAATGTCTaGGTACTTGTTTTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRLVENV*VLVFGG
Trigger: TCCTCCAAAAACAAGTACCAAGACATTCTCAACGAG...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAACGTTCACTTTCACCTaGTCGAACATTTTCATCACG +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPRTFTFT*SNIFIT
Trigger: CGTGATGAAAATGTTCGACAAGGTGAAAGTGAACGT...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAGGTACTGATGTTGCTTaGAATTTCTGCCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLGTDVA*NFCLGQ
Trigger: CTGACCCAGGCAGAAATTCAAAGCAACATCAGTACC...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTGACCAGTGTAACCCATaGCTTTGCTCTGTTCTCATC +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLDQCNP*LCSVLI
Trigger: GATGAGAACAGAGCAAAGCAATGGGTTACACTGGTC...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTACCAGCAAACACCTGTaGTCTGTGCAGATATTCCTG +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLTSKHL*SVQIFL
Trigger: CAGGAATATCTGCACAGACAACAGGTGTTTGCTGGT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTTGGTCCACCTTTGATTaGATTTCTTCCTCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLWSTFD*ISSSSA
Trigger: TGCGCTGGAGGAAGAAATCAAATCAAAGGTGGACCA...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AACAAAAATACTAGACAAGCCCATTTCTCAAGGCAGGCAATAGAGAATCCACGAGAGTTCTTCAGTACTTaGGCTATATACCTCAATCCA +
Preference number: 5 (lower is better)
Translates to: NKNTRQAHFSRQAIENPREFFST*AIYLNP
Trigger: TGGATTGAGGTATATAGCCAAAGTACTGAAGAACTC...TCGTGGATTCTCTATTGCCTGCCTTGAGAAATGGGCTTGTCTAGTATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCTTCCAGTTCAGTGGTaGGTGGCAATTCTTCAACTA +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYLPVQW*VAILQL
Trigger: TAGTTGAAGAATTGCCACCAACCACTGAACTGGAAG...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCCTTCACTGGACTCATaGTCAGTCTTTGACTCTTTC +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYPSLDS*SVFDSF
Trigger: GAAAGAGTCAAAGACTGACAATGAGTCCAGTGAAGG...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGTAGTTATATTTCTCTaGCACGTTGAGTGTGACCCA +
Preference number: 5 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVVVIFL*HVECDP
Trigger: TGGGTCACACTCAACGTGCAAGAGAAATATAACTAC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTAAAGATAACTCTTCCTaGCTGTCACCATTCGGAACC +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLKDNSS*LSPFGT
Trigger: GGTTCCGAATGGTGACAGCAAGGAAGAGTTATCTTT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTACCAGCAGTCCAATCTaGATGTCCATTAGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLTSSPI*MSIRFK
Trigger: CTTGAACCTAATGGACATCAAGATTGGACTGCTGGT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTTGATGACTGTAGGGTaGCCTGTCACTATGTCTTGT +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYLMTVG*PVTMSC
Trigger: ACAAGACATAGTGACAGGCAACCCTACAGTCATCAA...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATTAATGACCAGGGCCTaGTCCTCAATGATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLLMTRA*SSMISF
Trigger: GAAAGAGATCATTGAGGACAAGGCCCTGGTCATTAA...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp GTAATAATTAATTTGATCTTCATAAAACGCTGCCTTCTTATTAAGTaGGTTCAGGGTTTGCTGAAGTTTCGACAGCTCAGCTTTTCGAAG +
Preference number: 5 (lower is better)
Translates to: VIINLIFIKRCLLIK*VQGLLKFRQLSFSK
Trigger: CTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCAGCGTTTTATGAAGATCAAATTAATTATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 90 bp CTTGATGTAGGTGTCGTAATAATTAATTTGATCTTCATAAAACGCTaGCTTCTTATTAAGTGCGTTCAGGGTTTGCTGAAGTTTCGACAG +
Preference number: 5 (lower is better)
Translates to: LDVGVVIINLIFIKR*LLIKCVQGLLKFRQ
Trigger: CTGTCGAAACTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCAGCGTTTTATGAAGATCAAATTAATTATTACGACACCTACATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTTCTCTGATACCATTTTaGGAGCGAAGAACTTGGCTA +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLSLIPF*ERRTWL
Trigger: TAGCCAAGTTCTTCGCTCCAAAAATGGTATCAGAGA...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATACTCATTGTCAGTCTTaGACTCTTTCGCCTTCACAA +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYTHCQS*TLSPSQ
Trigger: TTGTGAAGGCGAAAGAGTCAAAGACTGACAATGAGT...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTAATGAATTTCGTCGACTaGTTCTGTGGCATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLMNFVD*FCGIWK
Trigger: TTTCCAGATGCCACAGAACAAGTCGACGAAATTCAT...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp ACAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATCTTTGACGTCATACTaGCTTGTCAAGGAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: TKVLFKTDNSQKTGLRTLSLTSY*LVKERE
Trigger: TTCCCTTTCCTTGACAAGCAAGTATGACGTCAAAGA...TAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp TATCCAATTATCAAAAAGGCACATGGCTACATTCTTCAGAACAGTTTTGGTCTTAGAATGTCTTGGTACTaGTTTTTGGAGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: YPIIKKAHGYILQNSFGLRMSWY*FLEDTC
Trigger: ACACGTGTCCTCCAAAAACAAGTACCAAGACATTCT...AAGACCAAAACTGTTCTGAAGAATGTAGCCATGTGCCTTTTTGATAATTGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp AAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGTCGTCCTGAATATTGAGTaGTACCTTTTCCATCTCAAC +
Preference number: 5 (lower is better)
Translates to: KFSLKLIIPRRQGLELYVVLNIE*YLFHLN
Trigger: GTTGAGATGGAAAAGGTACAACTCAATATTCAGGAC...GACATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS-3UTR CAA 90 bp CAAAAGTTCTCTTTAAAACTGATAATTCCCAGAAGACAGGGCTTAGAACTCTATGACATCACACGCTTCTaGAAAATATTTCCTGAATTC +
Preference number: 5 (lower is better)
Translates to: QKFSLKLIIPRRQGLELYDITRF*KIFPEF
Trigger: GAATTCAGGAAATATTTTCAAGAAGCGTGTGATGTC...ATAGAGTTCTAAGCCCTGTCTTCTGGGAATTATCAGTTTTAAAGAGAACTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp GGTCAACTGCTCCTTCCCCGAGAAAGGACTCCACCGTaGGCACCTCCCCCAGAGACTCCAGCAGCTCGTTCA +
Preference number: 6 (lower is better)
Translates to: GQLLLPRERTPP*APPPETPAARS
Trigger: TGAACGAGCTGCTGGAGTCTCTGGGGGAGGTGCCCACGGTGGAGTCCTTTCTCGGGGAAGGAGCAGTTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TGCTCGAGGGGCAGGCGTGCATCTTCTATCACTGCTTaGCTCTGCTTCCCTTCCTCCGGGGTCCTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: CSRGRRASSITA*LCFPSSGVLES
Trigger: AGACTCCAGGACCCCGGAGGAAGGGAAGCAGAGCCAAGCAGTGATAGAAGATGCACGCCTGCCCCTCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TTGCTCGAGGGGCAGGCGTGCATCTTCTATCACTGCTaGGCTCTGCTTCCCTTCCTCCGGGGTCCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: LLEGQACIFYHC*ALLPFLRGPGV
Trigger: GACTCCAGGACCCCGGAGGAAGGGAAGCAGAGCCAAGCAGTGATAGAAGATGCACGCCTGCCCCTCGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TCACTGCTTGGCTCTGCTTCCCTTCCTCCGGGGTCCTaGAGTCTACAACGGCACGGCTCTCCATGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SLLGSASLPPGS*SLQRHGSPCLW
Trigger: CCAAAGACATGGAGAGCCGTGCCGTTGTAGACTCCAGGACCCCGGAGGAAGGGAAGCAGAGCCAAGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp ACGTGTCCAGTCTGCTCCAGCGTCCGCAGGTTCCTCTaGATCTTCCTCTTCTTTTGCTCGAGGGGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: TCPVCSSVRRFL*IFLFFCSRGRR
Trigger: ACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATTCAGAGGAACCTGCGGACGCTGGAGCAGACTGGACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp TCTTCACCTCCGGGTATGTCAGGGCTTGCTCTGTGGTaGCGTCGTAAGGCAGCTTGCTGGCTTCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: SSPPGMSGLALW*RRKAACWLLQS
Trigger: AGACTGGAGAAGCCAGCAAGCTGCCTTACGACGTCACCACAGAGCAAGCCCTGACATACCCGGAGGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp TTGTTGAAGCCTATGGTGGGGCTTCTGAGTTGGTTCTaGACAGCCACGAGGTCACTGCTCTCCAAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LLKPMVGLLSWF*TATRSLLSKAW
Trigger: CCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp GGCAGCTTGCTGGCTTCTCCAGTCTGCGTTTCCAGTTaGTTCACCCAAGCCTTGTACACCTCCACAGGGTTG +
Preference number: 6 (lower is better)
Translates to: GSLLASPVCVSS*FTQALYTSTGL
Trigger: CAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAGCAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp GTGTGCCTCATCCAGATTGTTGAAGCCTATGGTGGGGCTTCTGAGTaGGTTCTGCACAGCCACGAGGTCACTGCTCTCCAAGGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: VCLIQIVEAYGGASE*VLHSHEVTALQGLV
Trigger: AACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAATCTGGATGAGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp AGCGTGCTCCCTGGCTGGTTCCGGGTCACATCGATGATCAGCTTTTaGGTCTTTATCATGAGGCTTCTGCCATCGACGGCCTCGCCATCT +
Preference number: 6 (lower is better)
Translates to: SVLPGWFRVTSMISF*VFIMRLLPSTASPS
Trigger: AGATGGCGAGGCCGTCGATGGCAGAAGCCTCATGATAAAGACCAAAAAGCTGATCATCGATGTGACCCGGAACCAGCCAGGGAGCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp AGTCTGCTCCAGCGTCCGCAGGTTCCTCTGAATCTTCCTCTTCTTTaGCTCGAGGGGCAGGCGTGCATCTTCTATCACTGCTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SLLQRPQVPLNLPLL*LEGQACIFYHCLAL
Trigger: CAGAGCCAAGCAGTGATAGAAGATGCACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATTCAGAGGAACCTGCGGACGCTGGAGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp CGGCTCTCCATGTCTTTGGCGTGCTCTAGTTCCTGCTaGCCAGTTGCTGGGGTCTCTAAGATTTCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: RLSMSLACSSSC*PVAGVSKISVS
Trigger: GCTGACTGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp GCACGGCTCTCCATGTCTTTGGCGTGCTCTAGTTCCTaGTGCCCAGTTGCTGGGGTCTCTAAGATTTCAGTC +
Preference number: 6 (lower is better)
Translates to: ARLSMSLACSSS*CPVAGVSKISV
Trigger: GACTGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGGAGAGCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TTCTGCACAGCCACGAGGTCACTGCTCTCCAAGGCCTaGTTTAGCAGAGCAACGGCAGACAACATTTCCACG +
Preference number: 6 (lower is better)
Translates to: FCTATRSLLSKA*FSRATADNIST
Trigger: CGTGGAAATGTTGTCTGCCGTTGCTCTGCTAAACCAGGCCTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp AGGCAGCTTGCTGGCTTCTCCAGTCTGCGTTTCCAGTaGGTTCACCCAAGCCTTGTACACCTCCACAGGGTT +
Preference number: 6 (lower is better)
Translates to: RQLAGFSSLRFQ*VHPSLVHLHRV
Trigger: AACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAGCAAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CTCCAGTTTATTCTTCACCTCCGGGTATGTCAGGGCTaGCTCTGTGGTGACGTCGTAAGGCAGCTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LQFILHLRVCQG*LCGDVVRQLAG
Trigger: GCCAGCAAGCTGCCTTACGACGTCACCACAGAGCAAGCCCTGACATACCCGGAGGTGAAGAATAAACTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CCATGTCTTTGGCGTGCTCTAGTTCCTGCTGCCCAGTaGCTGGGGTCTCTAAGATTTCAGTCAGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: PCLWRALVPAAQ*LGSLRFQSACS
Trigger: GGAGCACGCTGACTGAAATCTTAGAGACCCCAGCAACTGGGCAGCAGGAACTAGAGCACGCCAAAGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp AGGGTGTTCTGTCCCCGGGCGCCTCTGTTGAAGCTGACAACCATCTaGATGACTGTAGGGTTGCCTGTCACTATGTCTTGTACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RVFCPRAPLLKLTTI*MTVGLPVTMSCTWS
Trigger: GGACCAGGTACAAGACATAGTGACAGGCAACCCTACAGTCATCAAGATGGTTGTCAGCTTCAACAGAGGCGCCCGGGGACAGAACACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTGCTGGCTTCTCCAGTCTGCGTTTCCAGTTGGTTCACCCAAGCCTaGTACACCTCCACAGGGTTGGTGTTAATGACCAGGGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: LLASPVCVSSWFTQA*YTSTGLVLMTRALS
Trigger: GGACAAGGCCCTGGTCATTAACACCAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp ATAGACAGCTGGCAGCTGGGCTTCTGGTTTCTTCAGTaGAAGCAGTGTGTTCTCGGGGTCACCTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: IDSWQLGFWFLQ*KQCVLGVTFLK
Trigger: CTTCAGGAAGGTGACCCCGAGAACACACTGCTTGCACTGAAGAAACCAGAAGCCCAGCTGCCAGCTGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TCCAGATTGTTGAAGCCTATGGTGGGGCTTCTGAGTTaGTTCTGCACAGCCACGAGGTCACTGCTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: SRLLKPMVGLLS*FCTATRSLLSK
Trigger: CTTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp GCAGCATGTAGTGCAGCTTCGTCCACAGACAGTTCATaGGCCAGAATGCCACCGATTTTGCTGAAAGCCGGC +
Preference number: 6 (lower is better)
Translates to: AACSAASSTDSS*ARMPPILLKAG
Trigger: GCCGGCTTTCAGCAAAATCGGTGGCATTCTGGCCAATGAACTGTCTGTGGACGAAGCTGCACTACATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp GACGTCGTAAGGCAGCTTGCTGGCTTCTCCAGTCTGCGTTTCCAGTaGGTTCACCCAAGCCTTGTACACCTCCACAGGGTTGGTGTTAAT +
Preference number: 6 (lower is better)
Translates to: DVVRQLAGFSSLRFQ*VHPSLVHLHRVGVN
Trigger: ATTAACACCAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGAAGCCAGCAAGCTGCCTTACGACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp CTGAATCTTCCTCTTCTTTTGCTCGAGGGGCAGGCGTaGATCTTCTATCACTGCTTGGCTCTGCTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: LNLPLLLLEGQA*IFYHCLALLPF
Trigger: GAAGGGAAGCAGAGCCAAGCAGTGATAGAAGATGCACGCCTGCCCCTCGAGCAAAAGAAGAGGAAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CACAGCAGCCATCCTGTTGACGGTACTGATGTTGCTTaGAATTTCTGCCTGGGTCAGCAGCTCCTCATACGC +
Preference number: 6 (lower is better)
Translates to: HSSHPVDGTDVA*NFCLGQQLLIR
Trigger: GCGTATGAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAACATCAGTACCGTCAACAGGATGGCTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATCCAGATTGTTGAAGCCTATGGTGGGGCTTCTGAGTaGGTTCTGCACAGCCACGAGGTCACTGCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: IQIVEAYGGASE*VLHSHEVTALQ
Trigger: TTGGAGAGCAGTGACCTCGTGGCTGTGCAGAACCAACTCAGAAGCCCCACCATAGGCTTCAACAATCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TGTCCCCGGGCGCCTCTGTTGAAGCTGACAACCATCTaGATGACTGTAGGGTTGCCTGTCACTATGTCTTGT +
Preference number: 6 (lower is better)
Translates to: CPRAPLLKLTTI*MTVGLPVTMSC
Trigger: ACAAGACATAGTGACAGGCAACCCTACAGTCATCAAGATGGTTGTCAGCTTCAACAGAGGCGCCCGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TCTCCAGTCTGCGTTTCCAGTTGGTTCACCCAAGCCTaGTACACCTCCACAGGGTTGGTGTTAATGACCAGG +
Preference number: 6 (lower is better)
Translates to: SPVCVSSWFTQA*YTSTGLVLMTR
Trigger: CCTGGTCATTAACACCAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CATCTATGCCCAACAGGACGCCTTTGTCATGTAGCTTaGCTGCCGTGTACCTCACTGGCTTCACTCTCTTCG +
Preference number: 6 (lower is better)
Translates to: HLCPTGRLCHVA*LPCTSLASLSS
Trigger: CGAAGAGAGTGAAGCCAGTGAGGTACACGGCAGCAAAGCTACATGACAAAGGCGTCCTGTTGGGCATAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp GATGTGGTCCACAGCAGCCATCCTGTTGACGGTACTGATGTTGCTTaGAATTTCTGCCTGGGTCAGCAGCTCCTCATACGCATCTCTCTC +
Preference number: 6 (lower is better)
Translates to: DVVHSSHPVDGTDVA*NFCLGQQLLIRISL
Trigger: GAGAGAGATGCGTATGAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAACATCAGTACCGTCAACAGGATGGCTGCTGTGGACCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp AATAGATGCCTCCAGTTTATTCTTCACCTCCGGGTATGTCAGGGCTaGCTCTGTGGTGACGTCGTAAGGCAGCTTGCTGGCTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: NRCLQFILHLRVCQG*LCGDVVRQLAGFSS
Trigger: ACTGGAGAAGCCAGCAAGCTGCCTTACGACGTCACCACAGAGCAAGCCCTGACATACCCGGAGGTGAAGAATAAACTGGAGGCATCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TGCGTTTCCAGTTGGTTCACCCAAGCCTTGTACACCTCCACAGGGTaGGTGTTAATGACCAGGGCCTTGTCCTCAATGATCTCTTTCACC +
Preference number: 6 (lower is better)
Translates to: CVSSWFTQALYTSTG*VLMTRALSSMISFT
Trigger: GGTGAAAGAGATCATTGAGGACAAGGCCCTGGTCATTAACACCAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp CGAATATCCTTGGCAATCTCGTTGAGAATGTCTTGGTACTTGTTTTaGGAGGACACGTGTCCAGTCTGCTCCAGCGTCCGCAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: RISLAISLRMSWYLF*EDTCPVCSSVRRFL
Trigger: GAGGAACCTGCGGACGCTGGAGCAGACTGGACACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATTGCCAAGGATATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp ACAGCAGCCATCCTGTTGACGGTACTGATGTTGCTTTaGATTTCTGCCTGGGTCAGCAGCTCCTCATACGCA +
Preference number: 6 (lower is better)
Translates to: TAAILLTVLMLL*ISAWVSSSSYA
Trigger: TGCGTATGAGGAGCTGCTGACCCAGGCAGAAATTCAAAGCAACATCAGTACCGTCAACAGGATGGCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp AAGCAGACCACAGCTTCTCCCGGATGTAATCTGATGTaGCCTCCTCCACAATGTCCTCAATTTCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: KQTTASPGCNLM*PPPQCPQFPLP
Trigger: CGGGAGAGGAAATTGAGGACATTGTGGAGGAGGTCACATCAGATTACATCCGGGAGAAGCTGTGGTCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp TTCTCGCCCTCAAACAGCTTGTTGGAGGCTGCGTGTTaGAGAACCTTTGCCACAGATCCCAAGTTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: FSPSNSLLEAAC*RTFATDPKFLL
Trigger: AAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp ATGCTCATTCTCGCCCTCAAACAGCTTGTTGGAGGCTaGGTGTTGCAGAACCTTTGCCACAGATCCCAAGTT +
Preference number: 6 (lower is better)
Translates to: MLILALKQLVGG*VLQNLCHRSQV
Trigger: AACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp ATAGAACAGAACATCCTGGTAGTGTTGGGCGCAGTCTaGGTCCACATCTCTGATATTAGCAGTGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: IEQNILVVLGAV*VHISDISSGQQ
Trigger: CTGCTGCCCACTGCTAATATCAGAGATGTGGACCCAGACTGCGCCCAACACTACCAGGATGTTCTGTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp AGTTGGTTCACCCAAGCCTTGTACACCTCCACAGGGTaGGTGTTAATGACCAGGGCCTTGTCCTCAATGATC +
Preference number: 6 (lower is better)
Translates to: SWFTQALYTSTG*VLMTRALSSMI
Trigger: GATCATTGAGGACAAGGCCCTGGTCATTAACACCAACCCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TTGGCAATCTCGTTGAGAATGTCTTGGTACTTGTTTTaGGAGGACACGTGTCCAGTCTGCTCCAGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: LAISLRMSWYLF*EDTCPVCSSVR
Trigger: GCGGACGCTGGAGCAGACTGGACACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp CCCGAGTTTCTGGGATTTTGTATAGAACAGAACATCCTGGTAGTGTaGGGCGCAGTCTGGGTCCACATCTCTGATATTAGCAGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PEFLGFCIEQNILVV*GAVWVHISDISSGQ
Trigger: CTGCCCACTGCTAATATCAGAGATGTGGACCCAGACTGCGCCCAACACTACCAGGATGTTCTGTTCTATACAAAATCCCAGAAACTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp CAAATGCTCATTCTCGCCCTCAAACAGCTTGTTGGAGGCTGCGTGTaGCAGAACCTTTGCCACAGATCCCAAGTTTCTCCTTTGGTTGGA +
Preference number: 6 (lower is better)
Translates to: QMLILALKQLVGGCV*QNLCHRSQVSPLVG
Trigger: TCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTTGAAGGTCATCTATGCCCAACAGGACGCCTTTGTCATGTAGCTTaGCTGCCGTGTACCTCACTGGCTTCACTCTCTTCGTTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: FEGHLCPTGRLCHVA*LPCTSLASLSSFLW
Trigger: CCAAAGGAACGAAGAGAGTGAAGCCAGTGAGGTACACGGCAGCAAAGCTACATGACAAAGGCGTCCTGTTGGGCATAGATGACCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp CTCATTCACGTCAACGACCAGTGTAACCCATTGCTTTaGTCTGTTCTCATCCACGTTGGCCTCATTGATGGC +
Preference number: 6 (lower is better)
Translates to: LIHVNDQCNPLL*SVLIHVGLIDG
Trigger: GCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp GCCAGAATGCCACCGATTTTGCTGAAAGCCGGCATCTaGATCCCGTACTTCTCCAGTTCTTTCCTCATGTTA +
Preference number: 6 (lower is better)
Translates to: ARMPPILLKAGI*IPYFSSSFLML
Trigger: TAACATGAGGAAAGAACTGGAGAAGTACGGGATCCAGATGCCGGCTTTCAGCAAAATCGGTGGCATTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp ATGACAAATGCTCATTCTCGCCCTCAAACAGCTTGTTaGAGGCTGCGTGTTGCAGAACCTTTGCCACAGATC +
Preference number: 6 (lower is better)
Translates to: MTNAHSRPQTAC*RLRVAEPLPQI
Trigger: GATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp AGCAGATCGAGGGAAGAAATGATGGAGCCCAGGACTTaGTCGGTGACCTTCCTCAGGTTTTCAATAGATGCC +
Preference number: 6 (lower is better)
Translates to: SRSREEMMEPRT*SVTFLRFSIDA
Trigger: GGCATCTATTGAAAACCTGAGGAAGGTCACCGACAAAGTCCTGGGCTCCATCATTTCTTCCCTCGATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CAAACAGCTTGTTGGAGGCTGCGTGTTGCAGAACCTTaGCCACAGATCCCAAGTTTCTCCTTTGGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: QTACWRLRVAEP*PQIPSFSFGWS
Trigger: ACTCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp GATGACAAATGCTCATTCTCGCCCTCAAACAGCTTGTaGGAGGCTGCGTGTTGCAGAACCTTTGCCACAGAT +
Preference number: 6 (lower is better)
Translates to: DDKCSFSPSNSL*EAACCRTFATD
Trigger: ATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATCATGAGGCTTCTGCCATCGACGGCCTCGCCATCTTaGACGTCATACTTGCTTGTCAAGGAAAGGGAAATC +
Preference number: 6 (lower is better)
Translates to: IMRLLPSTASPS*TSYLLVKEREI
Trigger: GATTTCCCTTTCCTTGACAAGCAAGTATGACGTCAAAGATGGCGAGGCCGTCGATGGCAGAAGCCTCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TGGTACTCCTGTGAGAGGCTGTCGTCCACACAAGTTAACACTGCGTaGGGGTTTCTTAGTGTTATAATGGTCTGCTTGGCCACTCCCTTT +
Preference number: 6 (lower is better)
Translates to: WYSCERLSSTQVNTA*GFLSVIMVCLATPF
Trigger: AAAGGGAGTGGCCAAGCAGACCATTATAACACTAAGAAACCCCAACGCAGTGTTAACTTGTGTGGACGACAGCCTCTCACAGGAGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp GGTCAGCAGCTCCTCATACGCATCTCTCTCTTCCTCTaGAATACAGCTGTTCTTCAGTTTTGCGCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: GQQLLIRISLFL*NTAVLQFCAFL
Trigger: GAGGAAAGCGCAAAACTGAAGAACAGCTGTATTTCAGAGGAAGAGAGAGATGCGTATGAGGAGCTGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp AACGCTGCCTTCTTATTAAGTGCGTTCAGGGTTTGCTaGAGTTTCGACAGCTCAGCTTTTCGAAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: NAAFLLSAFRVC*SFDSSAFRSLR
Trigger: CCGCAAGCTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCAGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp AAACAGCTTGTTGGAGGCTGCGTGTTGCAGAACCTTTaGCACAGATCCCAAGTTTCTCCTTTGGTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: KQLVGGCVLQNL*HRSQVSPLVGV
Trigger: AACTCCAACCAAAGGAGAAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp ACTCCAGCAGCTCGTTCAGTAGGTCACTCTTTTCAGTaGCAATGGCATCCTGATGTTCCAGCAGGAGTAAAT +
Preference number: 6 (lower is better)
Translates to: TPAARSVGHSFQ*QWHPDVPAGVN
Trigger: ATTTACTCCTGCTGGAACATCAGGATGCCATTGCCACTGAAAAGAGTGACCTACTGAACGAGCTGCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TGTGAGAGGCTGTCGTCCACACAAGTTAACACTGCGTaGGGGTTTCTTAGTGTTATAATGGTCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: CERLSSTQVNTA*GFLSVIMVCLA
Trigger: GGCCAAGCAGACCATTATAACACTAAGAAACCCCAACGCAGTGTTAACTTGTGTGGACGACAGCCTCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATTGATGACAAATGCTCATTCTCGCCCTCAAACAGCTaGTTGGAGGCTGCGTGTTGCAGAACCTTTGCCACA +
Preference number: 6 (lower is better)
Translates to: IDDKCSFSPSNS*LEAACCRTFAT
Trigger: TGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TGTACCTGGTCCACCTTTGATTTGATTTCTTCCTCCAGCGCAGTTTaGAAGAGCTTGAGCAACAGGTATTCTTCCCTCTGGTTAGAGGCG +
Preference number: 6 (lower is better)
Translates to: CTWSTFDLISSSSAV*KSLSNRYSSLWLEA
Trigger: CGCCTCTAACCAGAGGGAAGAATACCTGTTGCTCAAGCTCTTCAAAACTGCGCTGGAGGAAGAAATCAAATCAAAGGTGGACCAGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTGGTCTTTATCATGAGGCTTCTGCCATCGACGGCCTCGCCATCTTaGACGTCATACTTGCTTGTCAAGGAAAGGGAAATCTCGGTTTTG +
Preference number: 6 (lower is better)
Translates to: LVFIMRLLPSTASPS*TSYLLVKEREISVL
Trigger: CAAAACCGAGATTTCCCTTTCCTTGACAAGCAAGTATGACGTCAAAGATGGCGAGGCCGTCGATGGCAGAAGCCTCATGATAAAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTGTTCATTGATGACAAATGCTCATTCTCGCCCTCAAACAGCTTGTaGGAGGCTGCGTGTTGCAGAACCTTTGCCACAGATCCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: LFIDDKCSFSPSNSL*EAACCRTFATDPKF
Trigger: AAACTTGGGATCTGTGGCAAAGGTTCTGCAACACGCAGCCTCCAACAAGCTGTTTGAGGGCGAGAATGAGCATTTGTCATCAATGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp AAGTCTTCAGAGGGTTCCCTGCGTCGATGGCTTCATTaGTGTACCCGAGAACTACCATTCGGTCATTTTCTT +
Preference number: 6 (lower is better)
Translates to: KSSEGSLRRWLH*CTRELPFGHFL
Trigger: AAGAAAATGACCGAATGGTAGTTCTCGGGTACATCAATGAAGCCATCGACGCAGGGAACCCTCTGAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp ATTGCTTTGCTCTGTTCTCATCCACGTTGGCCTCATTaGTGGCTTGCTGTATCTCATCCAGCCAGAGAACTT +
Preference number: 6 (lower is better)
Translates to: IALLCSHPRWPH*WLAVSHPAREL
Trigger: AAGTTCTCTGGCTGGATGAGATACAGCAAGCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp AAACACTCATTCACGTCAACGACCAGTGTAACCCATTaGTTTGCTCTGTTCTCATCCACGTTGGCCTCATTG +
Preference number: 6 (lower is better)
Translates to: KHSFTSTTSVTH*FALFSSTLASL
Trigger: CAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TTACCAGCAAACACCTGTTGTCTGTGCAGATATTCCTaGCGTTGTTTGAACCCCTTCCAGAAAGCCTGGATT +
Preference number: 6 (lower is better)
Translates to: LPANTCCLCRYS*RCLNPFQKAWI
Trigger: AATCCAGGCTTTCTGGAAGGGGTTCAAACAACGCCAGGAATATCTGCACAGACAACAGGTGTTTGCTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp AAAGTCTTCAGAGGGTTCCCTGCGTCGATGGCTTCATaGATGTACCCGAGAACTACCATTCGGTCATTTTCT +
Preference number: 6 (lower is better)
Translates to: KVFRGFPASMAS*MYPRTTIRSFS
Trigger: AGAAAATGACCGAATGGTAGTTCTCGGGTACATCAATGAAGCCATCGACGCAGGGAACCCTCTGAAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CTGGGATTTTGTATAGAACAGAACATCCTGGTAGTGTaGGGCGCAGTCTGGGTCCACATCTCTGATATTAGC +
Preference number: 6 (lower is better)
Translates to: LGFCIEQNILVV*GAVWVHISDIS
Trigger: GCTAATATCAGAGATGTGGACCCAGACTGCGCCCAACACTACCAGGATGTTCTGTTCTATACAAAATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CAAACACTCATTCACGTCAACGACCAGTGTAACCCATaGCTTTGCTCTGTTCTCATCCACGTTGGCCTCATT +
Preference number: 6 (lower is better)
Translates to: QTLIHVNDQCNP*LCSVLIHVGLI
Trigger: AATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ACGTTGAGTGTGACCCATGAACCTTCACTGGACTCATaGTCAGTCTTTGACTCTTTCGCCTTCACAAGGGTA +
Preference number: 6 (lower is better)
Translates to: TLSVTHEPSLDS*SVFDSFAFTRV
Trigger: TACCCTTGTGAAGGCGAAAGAGTCAAAGACTGACAATGAGTCCAGTGAAGGTTCATGGGTCACACTCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CTGTTGAAGCTGACAACCATCTTGATGACTGTAGGGTaGCCTGTCACTATGTCTTGTACCTGGTCCACCTTT +
Preference number: 6 (lower is better)
Translates to: LLKLTTILMTVG*PVTMSCTWSTF
Trigger: AAAGGTGGACCAGGTACAAGACATAGTGACAGGCAACCCTACAGTCATCAAGATGGTTGTCAGCTTCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTTTCTATCCAAACACTCATTCACGTCAACGACCAGTGTAACCCATaGCTTTGCTCTGTTCTCATCCACGTTGGCCTCATTGATGGCTTG +
Preference number: 6 (lower is better)
Translates to: FSIQTLIHVNDQCNP*LCSVLIHVGLIDGL
Trigger: CAAGCCATCAATGAGGCCAACGTGGATGAGAACAGAGCAAAGCAATGGGTTACACTGGTCGTTGACGTGAATGAGTGTTTGGATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp GGACTGAATCTTCACAACAGAATCAACGTTACCAGCAAACACCTGTaGTCTGTGCAGATATTCCTGGCGTTGTTTGAACCCCTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GLNLHNRINVTSKHL*SVQIFLALFEPLPE
Trigger: TTCTGGAAGGGGTTCAAACAACGCCAGGAATATCTGCACAGACAACAGGTGTTTGCTGGTAACGTTGATTCTGTTGTGAAGATTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp AGCTTTGCTGCCGTGTACCTCACTGGCTTCACTCTCTTCGTTCCTTaGGGTTCTGCTTTTCCATCCAGTTTAATTGATCTCCGAGAATTT +
Preference number: 6 (lower is better)
Translates to: SFAAVYLTGFTLFVP*GSAFPSSLIDLREF
Trigger: AAATTCTCGGAGATCAATTAAACTGGATGGAAAAGCAGAACCCAAAGGAACGAAGAGAGTGAAGCCAGTGAGGTACACGGCAGCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp CGGAGCCAACTAGTGCTTTGTAGTCGTCTCTGGCTTTaGTTGCCCGTAACAGGGATTGTATTTTCACAATTT +
Preference number: 6 (lower is better)
Translates to: RSQLVLCSRLWL*LPVTGIVFSQF
Trigger: AAATTGTGAAAATACAATCCCTGTTACGGGCAAGCAAAGCCAGAGACGACTACAAAGCACTAGTTGGCTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp GGAGATTTCCAACAATCTTTAACAGCTCTTCTTCCGTaGCATCGGGGAATTTCTCACGGATCGAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GDFQQSLTALLP*HRGISHGSSSS
Trigger: TGAAGAACTCGATCCGTGAGAAATTCCCCGATGCCACGGAAGAAGAGCTGTTAAAGATTGTTGGAAATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp GCTCCACATCGTAGATCTTCTTCTCTGATACCATTTTaGGAGCGAAGAACTTGGCTAACTTGGCGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: APHRRSSSLIPF*ERRTWLTWRGR
Trigger: TCTACCTCGCCAAGTTAGCCAAGTTCTTCGCTCCAAAAATGGTATCAGAGAAGAAGATCTACGATGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CTTCACAACAGAATCAACGTTACCAGCAAACACCTGTaGTCTGTGCAGATATTCCTGGCGTTGTTTGAACCC +
Preference number: 6 (lower is better)
Translates to: LHNRINVTSKHL*SVQIFLALFEP
Trigger: GGGTTCAAACAACGCCAGGAATATCTGCACAGACAACAGGTGTTTGCTGGTAACGTTGATTCTGTTGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TCCACCTTTGATTTGATTTCTTCCTCCAGCGCAGTTTaGAAGAGCTTGAGCAACAGGTATTCTTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: STFDLISSSSAV*KSLSNRYSSLW
Trigger: CCAGAGGGAAGAATACCTGTTGCTCAAGCTCTTCAAAACTGCGCTGGAGGAAGAAATCAAATCAAAGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp GATTCTTTGATTTCGAATATCCTTGGCAATCTCGTTGAGAATGTCTaGGTACTTGTTTTTGGAGGACACGTGTCCAGTCTGCTCCAGCGT +
Preference number: 6 (lower is better)
Translates to: DSLISNILGNLVENV*VLVFGGHVSSLLQR
Trigger: ACGCTGGAGCAGACTGGACACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATTGCCAAGGATATTCGAAATCAAAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTGATCTTCATAAAACGCTGCCTTCTTATTAAGTGCGTTCAGGGTTaGCTGAAGTTTCGACAGCTCAGCTTTTCGAAGCTTGCGGTGGAT +
Preference number: 6 (lower is better)
Translates to: LIFIKRCLLIKCVQG*LKFRQLSFSKLAVD
Trigger: ATCCACCGCAAGCTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCAGCGTTTTATGAAGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TCTGTGAAATCCACTTTTCCCAGCAAATCCTGGATCTaGGGCGCAATCCCCAGTTTAAACAGATACAAACTT +
Preference number: 6 (lower is better)
Translates to: SVKSTFPSKSWI*GAIPSLNRYKL
Trigger: AAGTTTGTATCTGTTTAAACTGGGGATTGCGCCCCAGATCCAGGATTTGCTGGGAAAAGTGGATTTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp TATTCCTGGCGTTGTTTGAACCCCTTCCAGAAAGCCTaGATTTTGACCACGCTCTCTGTTTGTTCATATAAG +
Preference number: 6 (lower is better)
Translates to: YSWRCLNPFQKA*ILTTLSVCSYK
Trigger: CTTATATGAACAAACAGAGAGCGTGGTCAAAATCCAGGCTTTCTGGAAGGGGTTCAAACAACGCCAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TGGCGTTGTTTGAACCCCTTCCAGAAAGCCTGGATTTaGACCACGCTCTCTGTTTGTTCATATAAGAATGCT +
Preference number: 6 (lower is better)
Translates to: WRCLNPFQKAWI*TTLSVCSYKNA
Trigger: AGCATTCTTATATGAACAAACAGAGAGCGTGGTCAAAATCCAGGCTTTCTGGAAGGGGTTCAAACAACGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp CTTCAAAATACCGCAGTCGTGAAAGATAACTCTTCCTaGCTGTCACCATTCGGAACCAGGACTGAATCTTCA +
Preference number: 6 (lower is better)
Translates to: LQNTAVVKDNSS*LSPFGTRTESS
Trigger: TGAAGATTCAGTCCTGGTTCCGAATGGTGACAGCAAGGAAGAGTTATCTTTCACGACTGCGGTATTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATAACTGGCTTGCTGACGGTCACCAAATCCGTGTATTaGTCCATATTAAACTTCTCTTCCGGTTCAGGGACA +
Preference number: 6 (lower is better)
Translates to: ITGLLTVTKSVY*SILNFSSGSGT
Trigger: TGTCCCTGAACCGGAAGAGAAGTTTAATATGGACAAATACACGGATTTGGTGACCGTCAGCAAGCCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TTGAGTTGTACCTTTTCCATCTCAACACCGAGGAATTaGGATCTGACGTCAAAGATGCCCATGTCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: LSCTFSISTPRN*DLTSKMPMSSV
Trigger: TACTGAGGACATGGGCATCTTTGACGTCAGATCCAAATTCCTCGGTGTTGAGATGGAAAAGGTACAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp TTTGCTGAAGTTTCGACAGCTCAGCTTTTCGAAGCTTaGGGTGGATTCTTTGATTTCGAATATCCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: FAEVSTAQLFEA*GGFFDFEYPWQ
Trigger: TTGCCAAGGATATTCGAAATCAAAGAATCCACCGCAAGCTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp AGCCAACTAGTGCTTTGTAGTCGTCTCTGGCTTTGCTaGCCCGTAACAGGGATTGTATTTTCACAATTTCAT +
Preference number: 6 (lower is better)
Translates to: SQLVLCSRLWLC*PVTGIVFSQFH
Trigger: ATGAAATTGTGAAAATACAATCCCTGTTACGGGCAAGCAAAGCCAGAGACGACTACAAAGCACTAGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATTTCGAATATCCTTGGCAATCTCGTTGAGAATGTCTaGGTACTTGTTTTTGGAGGACACGTGTCCAGTCTG +
Preference number: 6 (lower is better)
Translates to: ISNILGNLVENV*VLVFGGHVSSL
Trigger: CAGACTGGACACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATTGCCAAGGATATTCGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp ATAAAACGCTGCCTTCTTATTAAGTGCGTTCAGGGTTaGCTGAAGTTTCGACAGCTCAGCTTTTCGAAGCTT +
Preference number: 6 (lower is better)
Translates to: IKRCLLIKCVQG*LKFRQLSFSKL
Trigger: AAGCTTCGAAAAGCTGAGCTGTCGAAACTTCAGCAAACCCTGAACGCACTTAATAAGAAGGCAGCGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp CAAGTTAACACTGCGTTGGGGTTTCTTAGTGTTATAATGGTCTGCTaGGCCACTCCCTTTTCAATAGCCTCATTAATAGCTATGACTGCA +
Preference number: 6 (lower is better)
Translates to: QVNTALGFLSVIMVC*ATPFSIASLIAMTA
Trigger: TGCAGTCATAGCTATTAATGAGGCTATTGAAAAGGGAGTGGCCAAGCAGACCATTATAACACTAAGAAACCCCAACGCAGTGTTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp GCTAGGAGAAGACTTGAGTGCAGTCAAGATGTGATCTaGTTGTTTTCTATCCAAACACTCATTCACGTCAAC +
Preference number: 6 (lower is better)
Translates to: ARRRLECSQDVI*LFSIQTLIHVN
Trigger: GTTGACGTGAATGAGTGTTTGGATAGAAAACAATCAGATCACATCTTGACTGCACTCAAGTCTTCTCCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp TTCAGTAGGTCACTCTTTTCAGTGGCAATGGCATCCTaGTGTTCCAGCAGGAGTAAATGTGTATTGATGATT +
Preference number: 6 (lower is better)
Translates to: FSRSLFSVAMAS*CSSRSKCVLMI
Trigger: AATCATCAATACACATTTACTCCTGCTGGAACATCAGGATGCCATTGCCACTGAAAAGAGTGACCTACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS GCA 72 bp AACACTGCGTTGGGGTTTCTTAGTGTTATAATGGTCTaGTTGGCCACTCCCTTTTCAATAGCCTCATTAATA +
Preference number: 6 (lower is better)
Translates to: NTALGFLSVIMV*LATPFSIASLI
Trigger: TATTAATGAGGCTATTGAAAAGGGAGTGGCCAAGCAGACCATTATAACACTAAGAAACCCCAACGCAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 90 bp TTTTATGATCTTCAAAATACCGCAGTCGTGAAAGATAACTCTTCCTaGCTGTCACCATTCGGAACCAGGACTGAATCTTCACAACAGAAT +
Preference number: 6 (lower is better)
Translates to: FYDLQNTAVVKDNSS*LSPFGTRTESSQQN
Trigger: ATTCTGTTGTGAAGATTCAGTCCTGGTTCCGAATGGTGACAGCAAGGAAGAGTTATCTTTCACGACTGCGGTATTTTGAAGATCATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp GGATTCTTTGATTTCGAATATCCTTGGCAATCTCGTTaGGAATGTCTTGGTACTTGTTTTTGGAGGACACGT +
Preference number: 6 (lower is better)
Translates to: GFFDFEYPWQSR*ECLGTCFWRTR
Trigger: ACGTGTCCTCCAAAAACAAGTACCAAGACATTCTCAACGAGATTGCCAAGGATATTCGAAATCAAAGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CCA 72 bp CTTCACAAGGGTATCATAGTACTTGTTGGCACATTCTaGGAGTATGTTATGGATATTGCTAGGAGAAGACTT +
Preference number: 6 (lower is better)
Translates to: LHKGIIVLVGTF*EYVMDIARRRL
Trigger: AAGTCTTCTCCTAGCAATATCCATAACATACTCCCAGAATGTGCCAACAAGTACTATGATACCCTTGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp TATGATATCGAACATAACATTCTTAAACTGGTTGGTTaGAAGGTCATCTATGCCCAACAGGACGCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: YDIEHNILKLVG*KVIYAQQDAFV
Trigger: GACAAAGGCGTCCTGTTGGGCATAGATGACCTTCAAACCAACCAGTTTAAGAATGTTATGTTCGATATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS TCA 72 bp ATATTGCTAGGAGAAGACTTGAGTGCAGTCAAGATGTaGTCTGATTGTTTTCTATCCAAACACTCATTCACG +
Preference number: 6 (lower is better)
Translates to: ILLGEDLSAVKM*SDCFLSKHSFT
Trigger: CGTGAATGAGTGTTTGGATAGAAAACAATCAGATCACATCTTGACTGCACTCAAGTCTTCTCCTAGCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp GATACAAACTTAGCGCGTGAATGCAATAGATCATCCTaGGTATGTTTTTCCGATCGTAGACATCTGTTGTTT +
Preference number: 6 (lower is better)
Translates to: DTNLARECNRSS*VCFSDRRHLLF
Trigger: AAACAACAGATGTCTACGATCGGAAAAACATACCAAGGATGATCTATTGCATTCACGCGCTAAGTTTGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8
CDS CAA 72 bp GTTTTCCGTCTCTCCTTACTCAAGCTTTTAATTCCCTaGTTGTCAGTGTTATTCAGTATTTCTATTTCACCA +
Preference number: 6 (lower is better)
Translates to: VFRLSLLKLLIP*LSVLFSISISP
Trigger: TGGTGAAATAGAAATACTGAATAACACTGACAACAAGGGAATTAAAAGCTTGAGTAAGGAGAGACGGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068603.8