Pregenerated sensors for IQCM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031620Ensembl transcript IDs: ENSMUST00000034033.15, ENSMUST00000121983.2, ENSMUST00000212704.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCACGATCTGGGTCTGGGTaGGGAAATGACCACAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPRSGSG*GNDHSR Trigger: ACGACTGTGGTCATTTCCCCACCCAGACCCAGATCG...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCACGATCTGGGTCTGGGTaGGGAAATGACCACAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIARSGSG*GNDHSR Trigger: ACGACTGTGGTCATTTCCCCACCCAGACCCAGATCG...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCAACACATGTGGCTCCTTaGAGGAAATCTGCTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIATHVAP*RKSAVR Trigger: CCTCACAGCAGATTTCCTTCAAGGAGCCACATGTGT...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAGTCTGGGTGGGGAAATaGCCACAGTCGTTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPVWVGK*PQSLKY Trigger: ATACTTCAACGACTGTGGTCATTTCCCCACCCAGAC...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCAGTCTGGGTGGGGAAATaGCCACAGTCGTTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIAVWVGK*PQSLKY Trigger: ATACTTCAACGACTGTGGTCATTTCCCCACCCAGAC...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCACTGGACTTCCTGAGATaGATCTCCTTCTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIALDFLR*ISFSIS Trigger: GGAGATGGAGAAGGAGATGCATCTCAGGAAGTCCAG...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACACACATGTGGCTCCTTaGAGGAAATCTGCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYTHVAP*RKSAVR Trigger: CCTCACAGCAGATTTCCTTCAAGGAGCCACATGTGT...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAACATTCTGGACTTCCTaGGATGCATCTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPTFWTS*DASPSP Trigger: TGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGT...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTGTCTGGGTGGGGAAATaGCCACAGTCGTTGAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITVWVGK*PQSLKY Trigger: ATACTTCAACGACTGTGGTCATTTCCCCACCCAGAC...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCACCTCAATTAAAGCTGTaGACTTGGAAGTGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPPQLKL*TWKCPW Trigger: CCAGGGACACTTCCAAGTGCACAGCTTTAATTGAGG...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAGAAGAGGCCAGATTATaGAAAGGCAAGCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPEEARL*KGKLMW Trigger: CCACATGAGCTTGCCTTTGCATAATCTGGCCTCTTC...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCAGAAGAGGCCAGATTATaGAAAGGCAAGCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIAEEARL*KGKLMW Trigger: CCACATGAGCTTGCCTTTGCATAATCTGGCCTCTTC...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCACTTCTTTCTAGGCCTTaGCAGTCTTCTCTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIALLSRP*QSSLLA Trigger: TGCCAAGAGAGAAGACTGGCAAGGCCTAGAAAGAAG...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAAAAGGCAAGCTCATGTaGGAATGGAAGGGTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPKGKLM*EWKGSN Trigger: GTTGGAACCCTTCCATTCCCACATGAGCTTGCCTTT...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAAAGGCAAGCTCATGTaGGAATGGAAGGGTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIAKGKLM*EWKGSN Trigger: GTTGGAACCCTTCCATTCCCACATGAGCTTGCCTTT...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | ATGATTAGCAGATGTTTAATGAGGAAGATAAAGACCGCTCATCCAAACTTACTTACATTCTGGACTTCCTaGGATGCATCTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MISRCLMRKIKTAHPNLLTFWTS*DASPSP Trigger: TGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGT...AAGTAAGTTTGGATGAGCGGTCTTTATCTTCCTCATTAAACATCTGCTAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121983.2 |
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| CDS-3UTR TCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACACATTCTGGACTTCCTaGGATGCATCTCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYTFWTS*DASPSP Trigger: TGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGT...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACCCTCAATTAAAGCTGTaGACTTGGAAGTGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYPQLKL*TWKCPW Trigger: CCAGGGACACTTCCAAGTGCACAGCTTTAATTGAGG...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTCCTCAATTAAAGCTGTaGACTTGGAAGTGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITPQLKL*TWKCPW Trigger: CCAGGGACACTTCCAAGTGCACAGCTTTAATTGAGG...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTGAAGAGGCCAGATTATaGAAAGGCAAGCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITEEARL*KGKLMW Trigger: CCACATGAGCTTGCCTTTGCATAATCTGGCCTCTTC...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTCTTCTTTCTAGGCCTTaGCAGTCTTCTCTCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITLLSRP*QSSLLA Trigger: TGCCAAGAGAGAAGACTGGCAAGGCCTAGAAAGAAG...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | ATGATTAGCAGATGTTTAATGAGGAAGATAAAGACCGCTCATCCAAACTTACTTCTTCTTTCTAGGCCTTaGCAGTCTTCTCTCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: MISRCLMRKIKTAHPNLLLLSRP*QSSLLA Trigger: TGCCAAGAGAGAAGACTGGCAAGGCCTAGAAAGAAG...AAGTAAGTTTGGATGAGCGGTCTTTATCTTCCTCATTAAACATCTGCTAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121983.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTAAAGCTGTGCACTTaGAAGTGTCCCTGGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYLKLCT*KCPWDS Trigger: GCTATCCCAGGGACACTTCCAAGTGCACAGCTTTAA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTTAAAGCTGTGCACTTaGAAGTGTCCCTGGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITLKLCT*KCPWDS Trigger: GCTATCCCAGGGACACTTCCAAGTGCACAGCTTTAA...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCATTGCTCTTTATTCGTTaGAGTCTTTTGCGCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIALLFIR*SLLRSS Trigger: GCTTGAGCGCAAAAGACTTCAACGAATAAAGAGCAA...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR TCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTGCTCTTTATTCGTTaGAGTCTTTTGCGCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYLLFIR*SLLRSS Trigger: GCTTGAGCGCAAAAGACTTCAACGAATAAAGAGCAA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACAAAAATCTTGCTGGGTaGTTTCCAATACAGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYKNLAG*FPIQGL Trigger: TAGGCCCTGTATTGGAAACCACCCAGCAAGATTTTT...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | ATGATTAGCAGATGTTTAATGAGGAAGATAAAGACCGCTCATCCAAACTTACTTAAAAATCTTGCTGGGTaGTTTCCAATACAGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: MISRCLMRKIKTAHPNLLKNLAG*FPIQGL Trigger: TAGGCCCTGTATTGGAAACCACCCAGCAAGATTTTT...AAGTAAGTTTGGATGAGCGGTCTTTATCTTCCTCATTAAACATCTGCTAATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121983.2 |
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| CDS-3UTR GCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCATTCTCCATCTCCATTTaGTTACTCACGGATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIAFSISI*LLTDSI Trigger: TATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAA...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTATATTCGACACATGTaGCTCCTTGAAGGAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYYIRHM*LLEGNL Trigger: CAGATTTCCTTCAAGGAGCCACATGTGTCGAATATA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTCTCCATCTCCATTTaGTTACTCACGGATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYFSISI*LLTDSI Trigger: TATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAAAAGATCTACAGGGTaGCACTTCTCTTTTATATTC | + |
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Preference number: 4 (lower is better) Translates to: DELTCQHPKISPFILSIAKRSTG*HFSFIF Trigger: GAATATAAAAGAGAAGTGCCACCCTGTAGATCTTTT...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAAAAAGATCTACAGGGTaGCACTTCTCTTTTATATTC | + |
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Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPKRSTG*HFSFIF Trigger: GAATATAAAAGAGAAGTGCCACCCTGTAGATCTTTT...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTCTTCGCTGGAATAGTTaGAAAATTTCTATGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITLRWNS*KISMCG Trigger: ACCACACATAGAAATTTTCCAACTATTCCAGCGAAG...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | ATGATTAGCAGATGTTTAATGAGGAAGATAAAGACCGCTCATCCAAACTTACTTCTTCGCTGGAATAGTTaGAAAATTTCTATGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: MISRCLMRKIKTAHPNLLLRWNS*KISMCG Trigger: ACCACACATAGAAATTTTCCAACTATTCCAGCGAAG...AAGTAAGTTTGGATGAGCGGTCTTTATCTTCCTCATTAAACATCTGCTAATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121983.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACCTTCGCTGGAATAGTTaGAAAATTTCTATGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYLRWNS*KISMCG Trigger: ACCACACATAGAAATTTTCCAACTATTCCAGCGAAG...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCAGTCTTGTTTCTTCGCTaGAATAGTTGGAAAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: KTAHPNLLINDELTCQHPVLFLR*NSWKIS Trigger: AGAAATTTTCCAACTATTCCAGCGAAGAAACAAGAC...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACAAAAGATCTACAGGGTaGCACTTCTCTTTTATATTC | + |
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Preference number: 4 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYKRSTG*HFSFIF Trigger: GAATATAAAAGAGAAGTGCCACCCTGTAGATCTTTT...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTGTCTTGTTTCTTCGCTaGAATAGTTGGAAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKISPFILSIANHSVFITVLFLR*NSWKIS Trigger: AGAAATTTTCCAACTATTCCAGCGAAGAAACAAGAC...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS GCA 90 bp | CTGTCAGCAAGTTCCTTCAGAAGTCCCAGAGAAGAGGCCAGATTATaGAAAGGCAAGCTCATGTGGGAATGGAAGGGTTCCAACATTCTG | + |
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Preference number: 5 (lower is better) Translates to: LSASSFRSPREEARL*KGKLMWEWKGSNIL Trigger: CAGAATGTTGGAACCCTTCCATTCCCACATGAGCTTGCCTTTGCATAATCTGGCCTCTTCTCTGGGACTTCTGAAGGAACTTGCTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS TCA 90 bp | AGTACTCATCGATCTGGGTCTGGGTGGGGAAATGACCACAGTCGTTaGAGTATTTCAGCAGATCACTTCTTTCTAGGCCTTGCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: STHRSGSGWGNDHSR*SISADHFFLGLASL Trigger: AAGACTGGCAAGGCCTAGAAAGAAGTGATCTGCTGAAATACTTCAACGACTGTGGTCATTTCCCCACCCAGACCCAGATCGATGAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | AAGACCGCTCATCCAAACTTACTTATCAATGATGAACTAACTTGTCAACATCCATCCCCTGATAAATGCTaGCACAGTGGTGACCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KTAHPNLLINDELTCQHPSPDKC*HSGDQF Trigger: AAACTGGTCACCACTGTGCAAGCATTTATCAGGGGA...TGGATGTTGACAAGTTAGTTCATCATTGATAAGTAAGTTTGGATGAGCGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTCCCCTGATAAATGCTaGCACAGTGGTGACCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYSPDKC*HSGDQF Trigger: AAACTGGTCACCACTGTGCAAGCATTTATCAGGGGA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | ATGATTAGCAGATGTTTAATGAGGAAGATAAAGACCGCTCATCCAAACTTACTTTCCCCTGATAAATGCTaGCACAGTGGTGACCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: MISRCLMRKIKTAHPNLLSPDKC*HSGDQF Trigger: AAACTGGTCACCACTGTGCAAGCATTTATCAGGGGA...AAGTAAGTTTGGATGAGCGGTCTTTATCTTCCTCATTAAACATCTGCTAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121983.2 |
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| CDS-3UTR CAA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCACGGATGTTAGCTCTCTaGAGTATTGGATGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: DELTCQHPKISPFILSIARMLAL*SIGCPF Trigger: GAATGGACATCCAATACTCAAGAGAGCTAACATCCG...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | GATGAACTAACTTGTCAACATCCAAAGATTTCACCCTTTATCCTGTCAATAGCACTTCTCCATCTCCATTaGCTTACTCACGGATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: DELTCQHPKISPFILSIALLHLH*LTHGFN Trigger: ATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAAG...TGCTATTGACAGGATAAAGGGTGAAATCTTTGGATGTTGACAAGTTAGTTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACCGGATGTTAGCTCTCTaGAGTATTGGATGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYRMLAL*SIGCPF Trigger: GAATGGACATCCAATACTCAAGAGAGCTAACATCCG...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS GCA 90 bp | AACATTCTGGACTTCCTGAGATGCATCTCCTTCTCCATCTCCATTTaGTTACTCACGGATTCAATATCATTCATTATTTTACCCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: NILDFLRCISFSISI*LLTDSISFIILPSL Trigger: TAAACTGGGTAAAATAATGAATGATATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACCTTCTCCATCTCCATTaGCTTACTCACGGATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYLLHLH*LTHGFN Trigger: ATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAAG...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTCAGAATATCTTCCTaGACCATATCTGTGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SKDFTLYPVNSKSFCVHYFRISS*TISVEQ Trigger: CTGCTCCACAGATATGGTCAAGGAAGATATTCTGAA...GTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGATTTCACCCTTTATCCTGTCAATAGCAAATCATTCTGTGTTCATTACTTTCAGAATATCTTCCTaGACCATATCTGTGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PKISPFILSIANHSVFITFRISS*TISVEQ Trigger: CTGCTCCACAGATATGGTCAAGGAAGATATTCTGAA...AGTAATGAACACAGAATGATTTGCTATTGACAGGATAAAGGGTGAAATCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS GCA 72 bp | AGTTCCTTCAGAAGTCCCAGAGAAGAGGCCAGATTATaGAAAGGCAAGCTCATGTGGGAATGGAAGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSFRSPREEARL*KGKLMWEWKGS Trigger: GGAACCCTTCCATTCCCACATGAGCTTGCCTTTGCATAATCTGGCCTCTTCTCTGGGACTTCTGAAGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS TCA 72 bp | CGATCTGGGTCTGGGTGGGGAAATGACCACAGTCGTTaGAGTATTTCAGCAGATCACTTCTTTCTAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RSGSGWGNDHSR*SISADHFFLGL Trigger: AAGGCCTAGAAAGAAGTGATCTGCTGAAATACTTCAACGACTGTGGTCATTTCCCCACCCAGACCCAGATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS TCA 72 bp | TCCCAGTACTCATCGATCTGGGTCTGGGTGGGGAAATaGCCACAGTCGTTGAAGTATTTCAGCAGATCACTT | + |
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Preference number: 6 (lower is better) Translates to: SQYSSIWVWVGK*PQSLKYFSRSL Trigger: AAGTGATCTGCTGAAATACTTCAACGACTGTGGTCATTTCCCCACCCAGACCCAGATCGATGAGTACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS TCA 72 bp | TGTGGGAATGGAAGGGTTCCAACATTCTGGACTTCCTaGGATGCATCTCCTTCTCCATCTCCATTTGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: CGNGRVPTFWTS*DASPSPSPFAY Trigger: GTAAGCAAATGGAGATGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGTTGGAACCCTTCCATTCCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS TCA 72 bp | GGCACTTCTCTTTTATATTCGACACATGTGGCTCCTTaGAGGAAATCTGCTGTGAGGCCTCAATTAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GTSLLYSTHVAP*RKSAVRPQLKL Trigger: CAGCTTTAATTGAGGCCTCACAGCAGATTTCCTTCAAGGAGCCACATGTGTCGAATATAAAAGAGAAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS CAA 72 bp | ATTTGGCCCATGATACGAAACCTTGCTCTTTATTCGTaGAAGTCTTTTGCGCTCAAGCCATCCCCTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: IWPMIRNLALYS*KSFALKPSPDK Trigger: TTTATCAGGGGATGGCTTGAGCGCAAAAGACTTCAACGAATAAAGAGCAAGGTTTCGTATCATGGGCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS CAA 72 bp | CTCATTTTTCTTTCTCTTATGGATCGAGCCACCAACTaGCCAACAGTCCGGATGTTAGCTCTCTTGAGTATT | + |
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Preference number: 6 (lower is better) Translates to: LIFLSLMDRATN*PTVRMLALLSI Trigger: AATACTCAAGAGAGCTAACATCCGGACTGTTGGCAAGTTGGTGGCTCGATCCATAAGAGAAAGAAAAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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| CDS CAA 90 bp | CAACATTCTGGACTTCCTGAGATGCATCTCCTTCTCCATCTCCATTaGCTTACTCACGGATTCAATATCATTCATTATTTTACCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QHSGLPEMHLLLHLH*LTHGFNIIHYFTQF Trigger: AAACTGGGTAAAATAATGAATGATATTGAATCCGTGAGTAAGCAAATGGAGATGGAGAAGGAGATGCATCTCAGGAAGTCCAGAATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034033.15 ENSMUST00000121983.2 ENSMUST00000212704.2 |
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