Pregenerated sensors for IQCK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073856Ensembl transcript IDs: ENSMUST00000098087.9, ENSMUST00000106547.2, ENSMUST00000152136.8, ENSMUST00000208658.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACTCCACAGAGGTCTGGAGTCAGTTGCCAAGGTAGCGGGACAATaGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTTCAGAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: RLHRGLESVAKVAGQ*QRGGAPMCQLFQKL Trigger: TAACTTCTGAAACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCAACTGACTCCAGACCTCTGTGGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR TCA 90 bp | GGCATGCCACCATATTGGGACTATAACAGCCACTCTGTCCCCTCCTaGGAGAAGACTCCACAGAGGTCTGGAGTCAGTTGCCAAGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: GMPPYWDYNSHSVPS*EKTPQRSGVSCQGS Trigger: GCTACCTTGGCAACTGACTCCAGACCTCTGTGGAGTCTTCTCTCAGGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGGTGGCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR CCA 90 bp | CGAGGCATGCCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTaGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RGMPIVTAQRMLLTP*RGFGVRQEAKVLWL Trigger: AAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATaGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAATGGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: QILLRRLSATSGHFK*ENPGEQQPQNQWDH Trigger: ATGGTCCCATTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR TCA 90 bp | CTTGAGCCAGTCTTCCACAAATGGAATGGAGAAGAATTCTGTGAATaGCTCCCCTGCCCTCTTCGGATTCTGGTTGTACAGCCACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: LEPVFHKWNGEEFCE*LPCPLRILVVQPLS Trigger: ACTGAGTGGCTGTACAACCAGAATCCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCATTCCATTTGTGGAAGACTGGCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR TCA 90 bp | GGCAAGTGGAGATCAAAATCTATTTGTCCACACCAAAATACTTCCTaGGTATCACCGGAGCCTGTCTACAGAGTTCATTCATTCCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GKWRSKSICPHQNTS*VSPEPVYRVHSFPA Trigger: AGCAGGGAATGAATGAACTCTGTAGACAGGCTCCGGTGATACTCAGGAAGTATTTTGGTGTGGACAAATAGATTTTGATCTCCACTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR TCA 90 bp | GTTCCTGTCTTGGTGTTCTTCAACAATGGACTAGAACCTGTAAACTaGAATAAACCCTTTCCTCCCCAAGTTGCCTTTGGTCAGTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: VPVLVFFNNGLEPVN*NKPFPPQVAFGQCY Trigger: ATAACACTGACCAAAGGCAACTTGGGGAGGAAAGGGTTTATTTCAGTTTACAGGTTCTAGTCCATTGTTGAAGAACACCAAGACAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR TCA 90 bp | ACAGATGTACACAGAACACCCAGCATCATGCTTTCTCTAAGAAGCTaGATACACTCCCTAAAGGCTTACTCTACAAGCCTATGTTATATG | + |
|
Preference number: 1 (lower is better) Translates to: TDVHRTPSIMLSLRS*IHSLKAYSTSLCYM Trigger: CATATAACATAGGCTTGTAGAGTAAGCCTTTAGGGAGTGTATTCAGCTTCTTAGAGAAAGCATGATGCTGGGTGTTCTGTGTACATCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGGGTTATGTAAGAAAAGCTGGCTTAGTAATAGCCAGGGGAGCCAGCCAGGCAAACGGGACCGGCTaGCAGGAGCCCCCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ALGYVRKAGLVIARGASQANGTG*QEPPLG Trigger: TCCCAGTGGGGGCTCCTGGCAGCCGGTCCCGTTTGC...CTGGCTGGCTCCCCTGGCTATTACTAAGCCAGCTTTTCTTACATAACCCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAGGCTGGCCTCAAACTCTGGGTCTTCTAGTGTCAGCCCCTCAAGTGCTACTTCTGCGAGCCTGTTaGCTGAGGTCGCACCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SSGWPQTLGLLVSAPQVLLLRAC*LRSHRN Trigger: ATTCCGGTGCGACCTCAGGCAACAGGCTCGCAGAAG...TAGCACTTGAGGGGCTGACACTAGAAGACCCAGAGTTTGAGGCCAGCCTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAACTTGGCATGCCACCATATTGGGACTATAACAGCCACTCTGTCCCCTCCAAGGTAGCGGGACAATaGCAGAGGGGAGGGGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AQLGMPPYWDYNSHSVPSKVAGQ*QRGGAP Trigger: TGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTT...GGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGGTGGCATGCCAAGTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCCTCAGAGGATGTTGCTaGCACCGTGGAGAGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: PWRGFGVRQEAKVLWLLGLRGCC*HRGEDL Trigger: CAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAG...GCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CAA 90 bp | AGGACACGGTCACGAGGCATGCCAATAGTGACAGCTCAGAGGATGTaGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RTRSRGMPIVTAQRM*LTPWRGFGVRQEAK Trigger: TTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCGTGACCGTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGCTCAGAGGATGTTGCTaGCACCGTGGAGAGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: SATSGHFKWENPGEQQPQLRGCC*HRGEDL Trigger: CAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAG...CTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGGGTTATGTAAGAAAAGCTGGCTTAGTAATAGCCAGGGGAGCCAGCCAGTCCGGGTCTCTACCCTaGAGCTTCACACTACGCAAC | + |
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Preference number: 2 (lower is better) Translates to: ALGYVRKAGLVIARGASQSGSLP*SFTLRN Trigger: GTTGCGTAGTGTGAAGCTTCAGGGTAGAGACCCGGA...CTGGCTGGCTCCCCTGGCTATTACTAAGCCAGCTTTTCTTACATAACCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTACAACTGCCTCTTATTaGGCTGGAAACAACTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CQGSGTMAEGRGSNVPAVTTASY*AGNNSV Trigger: CACTGAGTTGTTTCCAGCCCAATAAGAGGCAGTTGT...AACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTGCTTGGCCCAGAAGATCTTCACCCGCTGGCGGATGTGCTTGTCCTCGCAGGGAAAGTACAGACTaGATACATCATCCTTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: APAWPRRSSPAGGCACPRRESTD*IHHPSI Trigger: TATGGAAGGATGATGTATCCAGTCTGTACTTTCCCT...GCGAGGACAAGCACATCCGCCAGCGGGTGAAGATCTTCTGGGCCAAGCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCTACAAAGGAACAAGTGATCTAGCCTGCTTGTGGGGCTTCAGAAAGGCTAGTTCATTCATTCCCTaGTTCCTCGGGCGATCTGCG | + |
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Preference number: 2 (lower is better) Translates to: VGYKGTSDLACLWGFRKASSFIP*FLGRSA Trigger: CGCAGATCGCCCGAGGAAGCAGGGAATGAATGAACT...AGCCTTTCTGAAGCCCCACAAGCAGGCTAGATCACTTGTTCCTTTGTAGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTAGGGAAAGTACAGACTaGATACATCATCCTTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: CQGSGTMAEGRGSNVPAVRESTD*IHHPSI Trigger: TATGGAAGGATGATGTATCCAGTCTGTACTTTCCCT...AACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAACTTGGCATGCCACCATATTGGGACTATAACAGCCACTCTGTCCCCTCCGGATCTTGGCAAAAGTaGGAACACTGGTGTCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AQLGMPPYWDYNSHSVPSGSWQK*EHWCQR Trigger: CCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCC...GGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGGTGGCATGCCAAGTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCTGCCTCTTATTGGGCTaGAAACAACTCAGTGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PWRGFGVRQEAKVLWLLGCLLLG*KQLSAR Trigger: TCTAGCACTGAGTTGTTTCCAGCCCAATAAGAGGCA...GCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CAA 90 bp | TCTGTCAGTAGCAGGGAGAGTGGAATTGGTGGCCGCGGGTGGTCCTaGAGCCAGTCTTCCACAAATGGAATGGAGAAGAATTCTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SVSSRESGIGGRGWS*SQSSTNGMEKNSVN Trigger: ATTCACAGAATTCTTCTCCATTCCATTTGTGGAAGACTGGCTCAAGGACCACCCGCGGCCACCAATTCCACTCTCCCTGCTACTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAATGGGACCATTAAGTTAATAGAAGAATTCTGTGAATaGCTCCCCTGCCCTCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: GRILASSSHRTNGTIKLIEEFCE*LPCPLR Trigger: CCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTC...TATTAACTTAATGGTCCCATTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGTGGAGAAGAATTCTGTaGATGACTCCCCTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: NRDLGKSGNTGVRGHGHEWRRIL*MTPLPS Trigger: AGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCA...CTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTACTGCTGTAATACTTTaGGGCTTTAACAATGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: CQGSGTMAEGRGSNVPAVTAVIL*GFNNGN Trigger: ATTTCCATTGTTAAAGCCCCAAAGTATTACAGCAGT...AACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCTCAGAGGATGTTGCTaGCACCGTGGAGAGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: QILLRRLSATSGHFKWENLRGCC*HRGEDL Trigger: CAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAG...ATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGAAAGTACAGACTGGATACATCATCCTTCCATACGGAGCAACTGACGTCCAAAAGTGGGAACACTaGTGTCAGAGGACACGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LGKVQTGYIILPYGATDVQKWEH*CQRTRS Trigger: TGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTG...GACGTCAGTTGCTCCGTATGGAAGGATGATGTATCCAGTCTGTACTTTCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGGATCTAGCCTGCTTGTaGGGCTTCAGAAAGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSDATPCFHEIELLPGLLDLACL*GFRKAL Trigger: CAAAGCCTTTCTGAAGCCCCACAAGCAGGCTAGATC...CAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR CAA 90 bp | TTTGGGGCTTTAACAATGGAAATCCTTTCTGACAACTGCCTCTTATaGGGCTGGAAACAACTCAGTGCTAGAGCCTTGGCCCCACTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FGALTMEILSDNCLL*GWKQLSARALAPLV Trigger: AACCAGTGGGGCCAAGGCTCTAGCACTGAGTTGTTTCCAGCCCAATAAGAGGCAGTTGTCAGAAAGGATTTCCATTGTTAAAGCCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGGTTATGTAAGAAAAGCTGGCTTAGTAATAGCCAGGGGAGCCAGCCAGGGTGTTCTTCAACAATaGACTAGAACCTGTAAACTG | + |
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Preference number: 2 (lower is better) Translates to: ALGYVRKAGLVIARGASQGVLQQ*TRTCKL Trigger: CAGTTTACAGGTTCTAGTCCATTGTTGAAGAACACC...CTGGCTGGCTCCCCTGGCTATTACTAAGCCAGCTTTTCTTACATAACCCAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGGCTGCAATGTGTCTCTTGCCTTTaGGATCTGGAGGCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: MLHLVFMKLSFCQGYWLQCVSCL*DLEALE Trigger: TTCCAAAGCCTCCAGATCTCAAAGGCAAGAGACACA...TTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGATAAAAGGAAGGAAGTaGGTTGAGCCCCAGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: LSDATPCFHEIELLPGLLIKGRK*VEPQNP Trigger: TGGATTCTGGGGCTCAACTCACTTCCTTCCTTTTAT...CAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGAAAGTACAGACTGGATACATCATCCTTCCATACGGAGCAACTGACGTCACAACTGCCTCTTATTaGGCTGGAAACAACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LGKVQTGYIILPYGATDVTTASY*AGNNSV Trigger: CACTGAGTTGTTTCCAGCCCAATAAGAGGCAGTTGT...GACGTCAGTTGCTCCGTATGGAAGGATGATGTATCCAGTCTGTACTTTCCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTGTTTGATTGGTGGCCGCGGGTaGTCCTTGAGCCAGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLFPLSWLTCILINKNCLIGGRG*SLSQSS Trigger: GGAAGACTGGCTCAAGGACCACCCGCGGCCACCAAT...CAAACAATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCTGATGAGAGCCCTTGGCAGGTGCTTTATTCATAAAGAGCTATGGCTCAATGGAAATCCTTTCTaGCAACTGCCTCTTATTGGG | + |
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Preference number: 2 (lower is better) Translates to: CELMRALGRCFIHKELWLNGNPF*QLPLIG Trigger: CCCAATAAGAGGCAGTTGTCAGAAAGGATTTCCATT...GAGCCATAGCTCTTTATGAATAAAGCACCTGCCAAGGGCTCTCATCAGCTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAATGGGACCATTAAGTTAATAACTATTTACCTAAGATaGGTGGTAGCTTGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRILASSSHRTNGTIKLITIYLR*VVACQS Trigger: TGACTGACAAGCTACCACGCATCTTAGGTAAATAGT...TATTAACTTAATGGTCCCATTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGAGTGCTTCAGGTTCCTaGTTTGAGTTCCTGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLSASGS*FEFLSW Trigger: CCAAGACAGGAACTCAAAGCAGGAACCTGAAGCACT...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATTGCCTCTTATTGGGCTaGAAACAACTCAGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QILLRRLSATSGHFKWENCLLLG*KQLSAR Trigger: TCTAGCACTGAGTTGTTTCCAGCCCAATAAGAGGCA...ATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATTTACCTAAGATGCGTGGTAGCTTGTCAGTCAGATACTACTGAGGAGGCTTCTGGGCATTTTAAATaGGAGAATCCTGGCGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TIYLRCVVACQSDTTEEASGHFK*ENPGEQ Trigger: CTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGA...AGCCTCCTCAGTAGTATCTGACTGACAAGCTACCACGCATCTTAGGTAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CAA 90 bp | CCAGTAACTAGTATTCTTCTGAGGTCAGTGCTTCAGGTTCCTGCTTaGAGTTCCTGTCTTGGTGTTCTTCAACAATGGACTAGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: PVTSILLRSVLQVPA*SSCLGVLQQWTRTC Trigger: ACAGGTTCTAGTCCATTGTTGAAGAACACCAAGACAGGAACTCAAAGCAGGAACCTGAAGCACTGACCTCAGAAGAATACTAGTTACTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGATTGGCTTGGAAAAGTaGATCCTCTGGGTGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLIGLEK*ILWVKD Trigger: GTCTTTCACCCAGAGGATTCACTTTTCCAAGCCAAT...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCCCAGTACTACTTGTaGTATTACCAATTTGACGGG | + |
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Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLPQYYL*YYQFDG Trigger: CCCGTCAAATTGGTAATATCACAAGTAGTACTGGGG...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTATGACCATGTATTGAGCCTTTCAAAGTCCAGAGCATCTTCTCATTATCTCCCCACTACAGCCCTGTaGGGTAGGAATTATCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: IYDHVLSLSKSRASSHYLPTTAL*GRNYPP Trigger: AGGGGGATAATTCCTACCTCACAGGGCTGTAGTGGG...GAGATAATGAGAAGATGCTCTGGACTTTGAAAGGCTCAATACATGGTCATAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTGTTTGTCAGTGCTAGAGCCTTaGCCCCACTGGTTACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLFPLSWLTCILINKNCLSVLEP*PHWLPQ Trigger: TTGGGGTAACCAGTGGGGCCAAGGCTCTAGCACTGA...CAAACAATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGGCTTCAGAAAGGCTTTaGGGCAAGTGGAGATCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLASERL*GKWRSK Trigger: TTTTGATCTCCACTTGCCCCAAAGCCTTTCTGAAGC...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTTCTCCCTGCCCTTTTTCTTGCCTCTTTGGAGAGAGTCTATATAGCTCAGTCCCCAAGTTGCCTTTaGTCAGTGTTATCACAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LFLPALFLASLERVYIAQSPSCL*SVLSQQ Trigger: TTGCTGTGATAACACTGACCAAAGGCAACTTGGGGA...CTGAGCTATATAGACTCTCTCCAAAGAGGCAAGAAAAAGGGCAGGGAGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTATTTACCTAAGATGCGTGGTAGCTTGTCAGTCAGATACTACTGAGGAGGCTAATGGAAATCCTTTCTaGCAACTGCCTCTTATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TIYLRCVVACQSDTTEEANGNPF*QLPLIG Trigger: CCCAATAAGAGGCAGTTGTCAGAAAGGATTTCCATT...AGCCTCCTCAGTAGTATCTGACTGACAAGCTACCACGCATCTTAGGTAAATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATAGGGAAAGTACAGACTaGATACATCATCCTTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: QILLRRLSATSGHFKWENRESTD*IHHPSI Trigger: TATGGAAGGATGATGTATCCAGTCTGTACTTTCCCT...ATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGAAGCTGAATACACTCCCTAAAGGCTTACTCTACAAGCCTATGTTATATTCTGGGAGGACTGACTaGCTCTTCTCTTCTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKKLNTLPKGLLYKPMLYSGRTD*LFSSSS Trigger: AGAGGAAGAAGAGAAGAGTCAGTCAGTCCTCCCAGA...ATATAACATAGGCTTGTAGAGTAAGCCTTTAGGGAGTGTATTCAGCTTCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTAGATTATTCATTCTTCCAGTTAGCTTCAGCAGTCAACTTGACACAGGCCTTGGTTCTTCTAGTCTaGCAGTCCCAAATTACACCC | + |
|
Preference number: 2 (lower is better) Translates to: ELDYSFFQLASAVNLTQALVLLV*QSQITP Trigger: GGGTGTAATTTGGGACTGGCAGACTAGAAGAACCAA...GGCCTGTGTCAAGTTGACTGCTGAAGCTAACTGGAAGAATGAATAATCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTGTTTGCAAAAGTGGGAACACTaGTGTCAGAGGACACGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLFPLSWLTCILINKNCLQKWEH*CQRTRS Trigger: TGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTG...CAAACAATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTTGTATTGGACAGCCAATGCCACAAGAATGAAAATCTTTCAGTAGCTGGACTGGAGGCTTTGGAATaGAGGAAAACTAACACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SVVLDSQCHKNENLSVAGLEALE*RKTNTL Trigger: AAGAGTGTTAGTTTTCCTTCATTCCAAAGCCTCCAG...TCCAGCTACTGAAAGATTTTCATTCTTGTGGCATTGGCTGTCCAATACAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGTTTCCCTCTATACACTaGCAAATTCACTGTTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLFPSIH*QIHCFH Trigger: ATGGAAACAGTGAATTTGTCAGTGTATAGAGGGAAA...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGGACACTCAGCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGGTATTGGACAGCCAATaGCACAAGAATGAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: VSWTLSDATPCFHEIELLVLDSQ*HKNENL Trigger: AAGATTTTCATTCTTGTGGCATTGGCTGTCCAATAC...CAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTAGATTATTCATTCTTCCAGTTAGCTTCAGCAGTCAACTTGACACAGGCCACAGCGGACTTATTATaGATGAATCTGTGTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ELDYSFFQLASAVNLTQATADLL*MNLCLL Trigger: CAAGAGACACAGATTCATTCATAATAAGTCCGCTGT...GGCCTGTGTCAAGTTGACTGCTGAAGCTAACTGGAAGAATGAATAATCTAATTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTTTGAATTTGCCAAATGGCAGAGTAGAAGAGGACACTGGCATTTACACAACTATTTACCTAAGATaGGTGGTAGCTTGTCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CLLNLPNGRVEEDTGIYTTIYLR*VVACQS Trigger: TGACTGACAAGCTACCACGCATCTTAGGTAAATAGT...TGTGTAAATGCCAGTGTCCTCTTCTACTCTGCCATTTGGCAAATTCAAAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTATTATTTTGTAAGTGACATCAATTCCCTTGCTTTTCAGAGAGCACTAAAATCTTTCAGTAGCTaGAAGGCTGAGGCAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSYYFVSDINSLAFQRALKSFSS*KAEAGG Trigger: TCCTCCTGCCTCAGCCTTCCAGCTACTGAAAGATTT...TAGTGCTCTCTGAAAAGCAAGGGAATTGATGTCACTTACAAAATAATAGCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTAATAACTAACTTCAGGGATAAGCTTACCAGAAAGCATACACACTTTTTCTCTCATTATCTCACTTaGTTCCCACTACAGCCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SVITNFRDKLTRKHTHFFSHYLT*FPLQPC Trigger: ACAGGGCTGTAGTGGGAACCAAGTGAGATAATGAGA...GAAAAAGTGTGTATGCTTTCTGGTAAGCTTATCCCTGAAGTTAGTTATTACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTGTTTGAGAAATTACATTTCATTTTCTaGTCCTGCTTGGCCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPLILADLHTYKQKLFEKLHFIF*SCLAQK Trigger: CTTCTGGGCCAAGCAGGAGCAGAAAATGAAATGTAA...TTTCTCAAACAATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAGAAGCTGAATACACTCCCTAAAGGCTTACTCTACAAGCCTATGTTATATGAGATCTGGAGGCTTTaGAATGAAGGAAAACTAACA | + |
|
Preference number: 2 (lower is better) Translates to: SKKLNTLPKGLLYKPMLYEIWRL*NEGKLT Trigger: TGTTAGTTTTCCTTCATTCCAAAGCCTCCAGATCTC...ATATAACATAGGCTTGTAGAGTAAGCCTTTAGGGAGTGTATTCAGCTTCTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTAATAACTAACTTCAGGGATAAGCTTACCAGAAAGCATACACACTTTTTCGAAGATCTATTGGCTTaGAAAAGTGAATCCTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SVITNFRDKLTRKHTHFFEDLLA*KSESSG Trigger: CCCAGAGGATTCACTTTTCCAAGCCAATAGATCTTC...GAAAAAGTGTGTATGCTTTCTGGTAAGCTTATCCCTGAAGTTAGTTATTACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | CCTCGGGCGATCTGCGGGCGGTCCGGGTCTCTACCCTaGAGCTTCACACTACGCAACTCTCTGACCGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRAICGRSGSLP*SFTLRNSLTGF Trigger: AAACCCGGTCAGAGAGTTGCGTAGTGTGAAGCTTCAGGGTAGAGACCCGGACCGCCCGCAGATCGCCCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR GCA 72 bp | TGCTTGGCCCAGAAGATCTTCACCCGCTGGCGGATGTaGTTGTCCTCGCGCAGCTTCTTCTGCCACTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: CLAQKIFTRWRM*LSSRSFFCHCR Trigger: GCGGCAGTGGCAGAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCGGGTGAAGATCTTCTGGGCCAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR GCA 72 bp | ATCACCGGAGCCTGTCTACAGAGTTCATTCATTCCCTaGTTCCTCGGGCGATCTGCGGGCGGTCCGGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ITGACLQSSFIP*FLGRSAGGPGL Trigger: GAGACCCGGACCGCCCGCAGATCGCCCGAGGAAGCAGGGAATGAATGAACTCTGTAGACAGGCTCCGGTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CCA 72 bp | TTCTGCTCCTGCTTGGCCCAGAAGATCTTCACCCGCTaGCGGATGTGCTTGTCCTCGCGCAGCTTCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FCSCLAQKIFTR*RMCLSSRSFFC Trigger: GCAGAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCGGGTGAAGATCTTCTGGGCCAAGCAGGAGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGGCATGCCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGGGCCGCGGGTGGTCCTaGAGCCAGTCTTCCACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TRHANSDSSEDVADTVERGRGWS*SQSSTN Trigger: ATTTGTGGAAGACTGGCTCAAGGACCACCCGCGGCC...CCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR CCA 72 bp | AGAGGTCTGGAGTCAGTTGCCAAGGTAGCGGGACAATaGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGLESVAKVAGQ*QRGGAPMCQLF Trigger: AAACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCAACTGACTCCAGACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR GCA 72 bp | CGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTaGTTTGGCTTCTCGGCAACAAATCCCTCCTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: RGEDLGSGRKLK*FGFSATNPSSR Trigger: ACGTGAGGAGGGATTTGTTGCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR CCA 72 bp | CTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATaGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: LRRLSATSGHFK*ENPGEQQPQNQ Trigger: TTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR CCA 72 bp | CCCTGGGAAGGTGGCCCTGGGTTATGTAAGAAAAGCTaGCTTAGTAATAGCCAGGGGAGCCAGCCAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: PWEGGPGLCKKS*LSNSQGSQPVT Trigger: AGTTACTGGCTGGCTCCCCTGGCTATTACTAAGCCAGCTTTTCTTACATAACCCAGGGCCACCTTCCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | CCATATTGGGACTATAACAGCCACTCTGTCCCCTCCTaGGAGAAGACTCCACAGAGGTCTGGAGTCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PYWDYNSHSVPS*EKTPQRSGVSC Trigger: GCAACTGACTCCAGACCTCTGTGGAGTCTTCTCTCAGGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR GCA 72 bp | GTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTaGCAGCTGTTTCAGAAGTTAAGATCTGGTTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: VAGQWQRGGAPM*QLFQKLRSGYC Trigger: GCAATAACCAGATCTTAACTTCTGAAACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR GCA 72 bp | AGGTTCGTGGGCTACAAAGGAACAAGTGATCTAGCCTaGTTGTGGGGCTTCAGAAAGGCTTTGGGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RFVGYKGTSDLA*LWGFRKALGQV Trigger: CACTTGCCCCAAAGCCTTTCTGAAGCCCCACAAGCAGGCTAGATCACTTGTTCCTTTGTAGCCCACGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CCA 72 bp | GTGGGCTACAAAGGAACAAGTGATCTAGCCTGCTTGTaGGGCTTCAGAAAGGCTTTGGGGCAAGTGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: VGYKGTSDLACL*GFRKALGQVEI Trigger: GATCTCCACTTGCCCCAAAGCCTTTCTGAAGCCCCACAAGCAGGCTAGATCACTTGTTCCTTTGTAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACAACTTGGCATGCCACCATATTGGGACTATAACAGCCACTCTGTCCCCTCCGGGAGGGGTTGTCTTTaGAATTTGCCAAATGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AQLGMPPYWDYNSHSVPSGRGCL*NLPNGR Trigger: TCTGCCATTTGGCAAATTCAAAAGACAACCCCTCCC...GGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGGTGGCATGCCAAGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR CCA 72 bp | TACACACGGCAGCCAGGGAGGAGAAAGGAGGTAAGCTaGACACTCAGCGATGCTACACCTTGTTTTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: YTRQPGRRKEVS*TLSDATPCFHE Trigger: TTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCCAGCTTACCTCCTTTCTCCTCCCTGGCTGCCGTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGTTAAAATAGGGATCTaGGCAAAAGTGGGAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: HRGEDLGSGRKLKCFGFSVKIGI*AKVGTL Trigger: CAGTGTTCCCACTTTTGCCAAGATCCCTATTTTAAC...CGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACCCTCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATCGCTGGCGGATGTGCTaGTCCTCGCGCAGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPSLFPLSWLTCILINKNRWRMC*SSRSFF Trigger: GAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCG...ATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGAGGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCCAGAGCATCTTCTCATTATCTCACTTGGTTCCCACTACAGCCCTGTGAGAGTGATCTAGCCTGCTaGTGGGGCTTCAGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KSRASSHYLTWFPLQPCESDLAC*WGFRKA Trigger: AGCCTTTCTGAAGCCCCACAAGCAGGCTAGATCACT...CTCACAGGGCTGTAGTGGGAACCAAGTGAGATAATGAGAAGATGCTCTGGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | ACTGGCATTTACACATCCAAGGATGCAGCGACCATGTaGGCTGATGAGAGCCCTTGGCAGGTGCTTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGIYTSKDAATM*ADESPWQVLYS Trigger: TGAATAAAGCACCTGCCAAGGGCTCTCATCAGCTCACATGGTCGCTGCATCCTTGGATGTGTAAATGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR TCA 72 bp | GCCAGTCTTCCACAAATGGAATGGAGAAGAATTCTGTaGATGACTCCCCTGCCCTCTTCGGATTCTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ASLPQMEWRRIL*MTPLPSSDSGC Trigger: ACAACCAGAATCCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCATTCCATTTGTGGAAGACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR CCA 72 bp | CATCTCTGTGAGCATTTTCTTGATTGTTCACTAATGTaGGCAATACAAGCCCTGGGAAGGTGGCCCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLCEHFLDCSLM*AIQALGRWPWV Trigger: AACCCAGGGCCACCTTCCCAGGGCTTGTATTGCCCACATTAGTGAACAATCAAGAAAATGCTCACAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTACTACTTGTGATATTACCAATTTGACGGGGCAGCAACACTGCTGTGGGCTAGGCTTCAGAAAGGCTTaGGGGCAAGTGGAGATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: STTCDITNLTGQQHCCGLGFRKA*GQVEIK Trigger: TTTGATCTCCACTTGCCCCAAAGCCTTTCTGAAGCC...TAGCCCACAGCAGTGTTGCTGCCCCGTCAAATTGGTAATATCACAAGTAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGGCTGCAACTGTGTCTCTTGCCTTaGAGATCTGGAGGCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: MLHLVFMKLSFCQGYWLQLCLLP*RSGGFG Trigger: TCCAAAGCCTCCAGATCTCAAAGGCAAGAGACACAG...TTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGGCTGCAAGCTTCAGCAGTCAACTaGACACAGGCCAGAGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: MLHLVFMKLSFCQGYWLQASAVN*TQARVI Trigger: GATAACTCTGGCCTGTGTCAAGTTGACTGCTGAAGC...TTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | CCTAAGATGCGTGGTAGCTTGTCAGTCAGATACTACTaGGGAGGCTTTCAGCCACGTCTGGGCATTTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PKMRGSLSVRYY*GGFQPRLGILN Trigger: ATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTGACTGACAAGCTACCACGCATCTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR TCA 72 bp | GTCTTCCACAAATGGAATGGAGAAGAATTCTGTGAATaGCTCCCCTGCCCTCTTCGGATTCTGGTTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: VFHKWNGEEFCE*LPCPLRILVVQ Trigger: CTGTACAACCAGAATCCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCATTCCATTTGTGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGCTGATGAGAGCCCTTGGCAGGTGCTTTATTCATAAAGAGCTATGGCTCGTTAAAATAGGGATCTaGGCAAAAGTGGGAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: CELMRALGRCFIHKELWLVKIGI*AKVGTL Trigger: CAGTGTTCCCACTTTTGCCAAGATCCCTATTTTAAC...GAGCCATAGCTCTTTATGAATAAAGCACCTGCCAAGGGCTCTCATCAGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR CCA 72 bp | TTTGAATTTGCCAAATGGCAGAGTAGAAGAGGACACTaGCATTTACACATCCAAGGATGCAGCGACCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: FEFAKWQSRRGH*HLHIQGCSDHV Trigger: CACATGGTCGCTGCATCCTTGGATGTGTAAATGCCAGTGTCCTCTTCTACTCTGCCATTTGGCAAATTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR TCA 72 bp | ATCCTCTGGGTGAAAGACAGTAAGTATATAGACACCTaGATATTGCTGCAGATAGTTCCTCGGGTAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: ILWVKDSKYIDT*ILLQIVPRVRT Trigger: GGTCCTTACCCGAGGAACTATCTGCAGCAATATTCAGGTGTCTATATACTTACTGTCTTTCACCCAGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR GCA 72 bp | GCGATGCTACACCTTGTTTTCATGAAATTGAGCTTCTaGCAGGGCTACTGGCTGCAACCATTATTTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: AMLHLVFMKLSF*QGYWLQPLFNG Trigger: TCCATTAAATAATGGTTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTTCTCCCTGCCCTTTTTCTTGCCTCTTTGGAGAGAGTCTATATAGCTCAGGAAGTCACAGTGGCCTaGTATAAAATAGGTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLPALFLASLERVYIAQEVTVA*YKIGHL Trigger: GAGATGACCTATTTTATACAAGGCCACTGTGACTTC...CTGAGCTATATAGACTCTCTCCAAAGAGGCAAGAAAAAGGGCAGGGAGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTAATAACTAACTTCAGGGATAAGCTTACCAGAAAGCATACACACTTTTTCCCTTTCCTCCCCAAGTaGCCTTTGGTCAGTGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: SVITNFRDKLTRKHTHFFPFLPK*PLVSVI Trigger: GATAACACTGACCAAAGGCAACTTGGGGAGGAAAGG...GAAAAAGTGTGTATGCTTTCTGGTAAGCTTATCCCTGAAGTTAGTTATTACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR-3UTR CAA 90 bp | GTACCCTCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATGGTTGTCTTTTGAATTaGCCAAATGGCAGAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLFPLSWLTCILINKNGCLLN*PNGRVE Trigger: TTCTACTCTGCCATTTGGCAAATTCAAAAGACAACC...ATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGAGGGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCTTTGGTCAGTGTTATCACAGCAACAGAAAAATAACTAGGACAGTCATCGTCTCTGAGTTGCTTTaGTCAGATATTTTTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAFGQCYHSNRKITRTVIVSELL*SDIFHS Trigger: GCTGTGAAAAATATCTGACAAAAGCAACTCAGAGAC...GATGACTGTCCTAGTTATTTTTCTGTTGCTGTGATAACACTGACCAAAGGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | AGATCAAAATCTATTTGTCCACACCAAAATACTTCCTaGGTATCACCGGAGCCTGTCTACAGAGTTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSKSICPHQNTS*VSPEPVYRVHS Trigger: TGAATGAACTCTGTAGACAGGCTCCGGTGATACTCAGGAAGTATTTTGGTGTGGACAAATAGATTTTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR GCA 72 bp | ATTGAACGTTCTATTAGTGTTGTATTGGACAGCCAATaGCACAAGAATGAAAATCTTTCAGTAGCTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IERSISVVLDSQ*HKNENLSVAGR Trigger: CCTTCCAGCTACTGAAAGATTTTCATTCTTGTGGCATTGGCTGTCCAATACAACACTAATAGAACGTTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CCA 72 bp | ATTATGAATGAATCTGTGTCTCTTGCCTTTGAGATCTaGAGGCTTTGGAATGAAGGAAAACTAACACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IMNESVSLAFEI*RLWNEGKLTLF Trigger: GAAGAGTGTTAGTTTTCCTTCATTCCAAAGCCTCCAGATCTCAAAGGCAAGAGACACAGATTCATTCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR TCA 72 bp | CACTTCTTCCAAGTCACCATTTTTCCCTCTATACACTaGCAAATTCACTGTTTCCATTCACGAAACATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HFFQVTIFPSIH*QIHCFHSRNIY Trigger: GTAAATGTTTCGTGAATGGAAACAGTGAATTTGTCAGTGTATAGAGGGAAAAATGGTGACTTGGAAGAAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CCA 72 bp | CTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTaGCTGCAACCATTATTTAATGGATTTTTCCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: LVFMKLSFCQGY*LQPLFNGFFLI Trigger: TATTAGGAAAAATCCATTAAATAATGGTTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CAA 72 bp | TTGGCCCAGAAGATCTTCACCCGCTGGCGGATGTGCTaGTCCTCGCGCAGCTTCTTCTGCCACTGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAQKIFTRWRMC*SSRSFFCHCRS Trigger: GCTGCGGCAGTGGCAGAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCGGGTGAAGATCTTCTGGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGCTTGGCCCAGAAGATCTTCACCCGCTGGCGGATGTGCTTGTCCTCGCCAGATAATCTCTGGGTaGACAGGTCTTGGGCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: APAWPRRSSPAGGCACPRQIISG*TGLGLD Trigger: GTCGAGCCCAAGACCTGTTCACCCAGAGATTATCTG...GCGAGGACAAGCACATCCGCCAGCGGGTGAAGATCTTCTGGGCCAAGCAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGTTGCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCTGTTTCTGCCTTCTTaGGAGGACAGGGCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESVAKVAGQWQRGGAPMCLFLPS*EDRAQE Trigger: CTCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAG...GCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCAACTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGTTGCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCTCTCTCTTTGCTTGGTaGAGCAGGCTGGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESVAKVAGQWQRGGAPMCSLFAW*SRLAIP Trigger: TGGAATGGCCAGCCTGCTTCACCAAGCAAAGAGAGA...GCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGCAACTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGATTGGTGGCCGCGGGTaGTCCTTGAGCCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SATSGHFKWENPGEQQPQIGGRG*SLSQSS Trigger: GGAAGACTGGCTCAAGGACCACCCGCGGCCACCAAT...CTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | CCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCGAAGAATTCTGTGAATaGCTCCCCTGCCCTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWRGFGVRQEAKVLWLLGEEFCE*LPCPLR Trigger: CCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTC...GCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR GCA 90 bp | CCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCTCTGGAAAGGTCGGCTaGTCAGCTTCATACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PWRGFGVRQEAKVLWLLGSGKVG*SASYSS Trigger: CGAGGAGTATGAAGCTGAGCAGCCGACCTTTCCAGA...GCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTACACCTTGTTTTCATGAAATTGAGCTTCTGCCAGGGCTACTGGCTGCAACGCGCGTCACCCGCCTaGCGCACAGAGGCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLHLVFMKLSFCQGYWLQRASPA*RTEAWN Trigger: GTTCCAAGCCTCTGTGCGCCAGGCGGGTGACGCGCG...TTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| 3UTR CAA 72 bp | TCACGAGGCATGCCAATAGTGACAGCTCAGAGGATGTaGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGMPIVTAQRM*LTPWRGFGVRQ Trigger: CTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGGAAGAATTCTGTGAATaGCTCCCCTGCCCTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SATSGHFKWENPGEQQPQEEFCE*LPCPLR Trigger: CCGAAGAGGGCAGGGGAGTCATTCACAGAATTCTTC...CTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | ACGAGGCATGCCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGAGAAGGCCTGGATCCTaGCTGCTGCTTCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRHANSDSSEDVADTVERRRPGS*LLLLLL Trigger: CAGAAGAAGAAGCAGCAGTCAGGATCCAGGCCTTCT...CCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGGGCCTGGATCCTGACTaGTGCTTCTTCTTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SATSGHFKWENPGEQQPQGLDPD*CFFFCQ Trigger: CTGACAGAAGAAGAAGCAGCAGTCAGGATCCAGGCC...CTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCTGTTTCTGCCTTCTTaGGAGGACAGGGCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSATSGHFKWENPGEQQLFLPS*EDRAQE Trigger: CTCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAG...CTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTTTCCAGGGAGCAGAACTaGAAAGATGAACATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKVAGQWQRGGAPMCQLFSREQN*KDEHFQ Trigger: CTGGAAATGTTCATCTTTCCAGTTCTGCTCCCTGGA...AAACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGATAATCTCTGGGTaGACAGGTCTTGGGCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSATSGHFKWENPGEQQPQIISG*TGLGLD Trigger: GTCGAGCCCAAGACCTGTTCACCCAGAGATTATCTG...TGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCATCTCTCTTTGCTTGGTaGAGCAGGCTGGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSATSGHFKWENPGEQQPSLFAW*SRLAIP Trigger: TGGAATGGCCAGCCTGCTTCACCAAGCAAAGAGAGA...TGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGAAAGTACAGACTGGATACATCATCCTTCCATACGGAGCAACTGACGTCATTGGTGGCCGCGGGTaGTCCTTGAGCCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKVQTGYIILPYGATDVIGGRG*SLSQSS Trigger: GGAAGACTGGCTCAAGGACCACCCGCGGCCACCAAT...GACGTCAGTTGCTCCGTATGGAAGGATGATGTATCCAGTCTGTACTTTCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGGCATGCCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGTTTTCTGCTCCTGCTTaGCCCAGAAGATCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TRHANSDSSEDVADTVERFSAPA*PRRSSP Trigger: GGGTGAAGATCTTCTGGGCCAAGCAGGAGCAGAAAA...CCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATGCCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| 3UTR CAA 72 bp | TTCGTGGGCTACAAAGGAACAAGTGATCTAGCCTGCTaGTGGGGCTTCAGAAAGGCTTTGGGGCAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVGYKGTSDLAC*WGFRKALGQVE Trigger: CTCCACTTGCCCCAAAGCCTTTCTGAAGCCCCACAAGCAGGCTAGATCACTTGTTCCTTTGTAGCCCACGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGCAGATAATCTCTGGGTaGACAGGTCTTGGGCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NRDLGKSGNTGVRGHGHEQIISG*TGLGLD Trigger: GTCGAGCCCAAGACCTGTTCACCCAGAGATTATCTG...CTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGTGGAGAAGAATTCTGTaGATGACTCCCCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RMLLTPWRGFGVRQEAKVWRRIL*MTPLPS Trigger: AGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCA...CACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGAGAAGGCCTGGATCCTaGCTGCTGCTTCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRDLGKSGNTGVRGHGHERRPGS*LLLLLL Trigger: CAGAAGAAGAAGCAGCAGTCAGGATCCAGGCCTTCT...CTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAATGGGACCATTAAGTTAATACTGTTTCTGCCTTCTTaGGAGGACAGGGCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRILASSSHRTNGTIKLILFLPS*EDRAQE Trigger: CTCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAG...TATTAACTTAATGGTCCCATTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | CCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCTCCAGGGAGCAGAACTaGAAAGATGAACATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PWRGFGVRQEAKVLWLLGSREQN*KDEHFQ Trigger: CTGGAAATGTTCATCTTTCCAGTTCTGCTCCCTGGA...GCCGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | CCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGATTTGGGGTCTTTTCTGCTCCTGCTTaGCCCAGAAGATCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PIVTAQRMLLTPWRGFGVFSAPA*PRRSSP Trigger: GGGTGAAGATCTTCTGGGCCAAGCAGGAGCAGAAAA...GACCCCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | CATGCCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGATTTGGTGGAGAAGAATTCTGTaGATGACTCCCCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HANSDSSEDVADTVERIWWRRIL*MTPLPS Trigger: AGAGGGCAGGGGAGTCATTCACAGAATTCTTCTCCA...CCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTCACTTTATAGCCTTCTaGAAAGGTCGGCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLTPWRGFGVRQEAKVLHFIAF*KGRLLS Trigger: GCTGAGCAGCCGACCTTTCCAGAAGGCTATAAAGTG...AAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | GCACAACTTGGCATGCCACCATATTGGGACTATAACAGCCACTCTGTCCCCTCCTGGGAACTGGTGTATTaGGAGGTAGTGCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLGMPPYWDYNSHSVPSWELVY*EVVLHV Trigger: AACATGGAGCACTACCTCCCAATACACCAGTTCCCA...GGAGGGGACAGAGTGGCTGTTATAGTCCCAATATGGTGGCATGCCAAGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | CACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGTTTCCAGATAATCTCTaGGTGAACAGGTCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRGEDLGSGRKLKCFGFSFPDNL*VNRSWA Trigger: AGCCCAAGACCTGTTCACCCAGAGATTATCTGGAAA...CGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGAAAGTACAGACTGGATACATCATCCTTCCATACGGAGCAACTGACGTCTCTCTCTTTGCTTGGTaGAGCAGGCTGGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKVQTGYIILPYGATDVSLFAW*SRLAIP Trigger: TGGAATGGCCAGCCTGCTTCACCAAGCAAAGAGAGA...GACGTCAGTTGCTCCGTATGGAAGGATGATGTATCCAGTCTGTACTTTCCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAATCCTGGCGAGCAGCAGCCACAGAACCAATGGGACCATTAAGTTAATACACTTTATAGCCTTCTaGAAAGGTCGGCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRILASSSHRTNGTIKLIHFIAF*KGRLLS Trigger: GCTGAGCAGCCGACCTTTCCAGAAGGCTATAAAGTG...TATTAACTTAATGGTCCCATTGGTTCTGTGGCTGCTGCTCGCCAGGATTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGGAACTGGTGTATTaGGAGGTAGTGCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLTPWRGFGVRQEAKVLWELVY*EVVLHV Trigger: AACATGGAGCACTACCTCCCAATACACCAGTTCCCA...AAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGTCCAGGGAGCAGAACTaGAAAGATGAACATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSATSGHFKWENPGEQQSREQN*KDEHFQ Trigger: CTGGAAATGTTCATCTTTCCAGTTCTGCTCCCTGGA...CTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| 3UTR CAA 72 bp | CCAACAAGTGTAGACGGGTGGGGGAGGGGTTGTCTTTaGAATTTGCCAAATGGCAGAGTAGAAGAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PTSVDGWGRGCL*NLPNGRVEEDT Trigger: AGTGTCCTCTTCTACTCTGCCATTTGGCAAATTCAAAAGACAACCCCTCCCCCACCCGTCTACACTTGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
||
| CDS-3UTR TCA 90 bp | CACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTGGCTTCTCGGCAGAACTGGAAAGATaGACATTTCCAGATAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRGEDLGSGRKLKCFGFSAELER*TFPDNL Trigger: GAGATTATCTGGAAATGTTCATCTTTCCAGTTCTGC...CGAGAAGCCAAAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
||
| CDS-3UTR GCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATTCTGGAAAGGTCGGCTaGTCAGCTTCATACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QILLRRLSATSGHFKWENSGKVG*SASYSS Trigger: CGAGGAGTATGAAGCTGAGCAGCCGACCTTTCCAGA...ATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
||
| CDS-3UTR GCA 90 bp | CAGATACTACTGAGGAGGCTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATGGCCTGGATCCTGACTaGTGCTTCTTCTTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QILLRRLSATSGHFKWENGLDPD*CFFFCQ Trigger: CTGACAGAAGAAGAAGCAGCAGTCAGGATCCAGGCC...ATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAGCCTCCTCAGTAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| 3UTR CAA 72 bp | GGACACTCAGCGATGCTACACCTTGTTTTCATGAAATaGAGCTTCTGCCAGGGCTACTGGCTGCAACCATTA | + |
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Preference number: 4 (lower is better) Translates to: GHSAMLHLVFMK*SFCQGYWLQPL Trigger: TAATGGTTGCAGCCAGTAGCCCTGGCAGAAGCTCAATTTCATGAAAACAAGGTGTAGCATCGCTGAGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| CDS-3UTR GCA 90 bp | ATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTTTACATTTCATTTTCTaGTCCTGCTTGGCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MLLTPWRGFGVRQEAKVLLHFIF*SCLAQK Trigger: CTTCTGGGCCAAGCAGGAGCAGAAAATGAAATGTAA...AAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS-3UTR TCA 90 bp | ATTGGGACTATAACAGCCACTCTGTCCCCTCCTGAGAGAAGACTCCACAGAGGTGCAGAACTGGAAAGATaGACATTTCCAGATAATCTC | + |
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Preference number: 4 (lower is better) Translates to: IGTITATLSPPERRLHRGAELER*TFPDNL Trigger: GAGATTATCTGGAAATGTTCATCTTTCCAGTTCTGC...ACCTCTGTGGAGTCTTCTCTCAGGAGGGGACAGAGTGGCTGTTATAGTCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| 3UTR CAA 72 bp | TTAACAATGGAAATCCTTTCTGACAACTGCCTCTTATaGGGCTGGAAACAACTCAGTGCTAGAGCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTMEILSDNCLL*GWKQLSARALA Trigger: GGCCAAGGCTCTAGCACTGAGTTGTTTCCAGCCCAATAAGAGGCAGTTGTCAGAAAGGATTTCCATTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CCA 90 bp | ACTATTTACCTAAGATGCGTGGTAGCTTGTCAGTCAGATACTACTGAGGAGGCTTTTCCAGATAATCTCTaGGTGAACAGGTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TIYLRCVVACQSDTTEEAFPDNL*VNRSWA Trigger: AGCCCAAGACCTGTTCACCCAGAGATTATCTGGAAA...AGCCTCCTCAGTAGTATCTGACTGACAAGCTACCACGCATCTTAGGTAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CAA 72 bp | AGTATTCTTCTGAGGTCAGTGCTTCAGGTTCCTGCTTaGAGTTCCTGTCTTGGTGTTCTTCAACAATGGACT | + |
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Preference number: 4 (lower is better) Translates to: SILLRSVLQVPA*SSCLGVLQQWT Trigger: AGTCCATTGTTGAAGAACACCAAGACAGGAACTCAAAGCAGGAACCTGAAGCACTGACCTCAGAAGAATACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| CDS-3UTR CCA 90 bp | GTACCCTCACTCTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTTTCCAGATAATCTCTaGGTGAACAGGTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPSLFPLSWLTCILINKNFPDNL*VNRSWA Trigger: AGCCCAAGACCTGTTCACCCAGAGATTATCTGGAAA...ATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAGAGTGAGGGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCCTTATCCTGGCTGACTTGCATACTTATAAACAAAAATTGTTTGAGAAATGGGAACTGGTGTATTaGGAGGTAGTGCTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: LPLILADLHTYKQKLFEKWELVY*EVVLHV Trigger: AACATGGAGCACTACCTCCCAATACACCAGTTCCCA...TTTCTCAAACAATTTTTGTTTATAAGTATGCAAGTCAGCCAGGATAAGGGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| 3UTR CAA 72 bp | ACAGCACAGATTATTGAACGTTCTATTAGTGTTGTATaGGACAGCCAATGCCACAAGAATGAAAATCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TAQIIERSISVV*DSQCHKNENLS Trigger: TGAAAGATTTTCATTCTTGTGGCATTGGCTGTCCAATACAACACTAATAGAACGTTCAATAATCTGTGCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| CDS TCA 90 bp | CCTTCTGGAAAGGTCGGCTGCTCAGCTTCATACTCCTCGCAGATCTaGTCCCATAGGCTCTTCCCCGGCGGCTCGACGACCTGCGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PSGKVGCSASYSSQI*SHRLFPGGSTTCGG Trigger: ACCCCCGCAGGTCGTCGAGCCGCCGGGGAAGAGCCTATGGGATCAGATCTGCGAGGAGTATGAAGCTGAGCAGCCGACCTTTCCAGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | GCCAAGGTAGCGGGACAATGGCAGAGGGGAGGGGCTCCAATGTGCCAGCTGTTTCTGGGAACTGGTGTATaGGGAGGTAGTGCTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: AKVAGQWQRGGAPMCQLFLGTGV*GGSAPC Trigger: ACATGGAGCACTACCTCCCAATACACCAGTTCCCAG...AAACAGCTGGCACATTGGAGCCCCTCCCCTCTGCCATTGTCCCGCTACCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | CTGCCACTGCCGCAGCTCCTGAATCTCAGGGTCACAGCGAACCAGATAGGCTCTCTGGGAACTGGTGTATaGGGAGGTAGTGCTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: LPLPQLLNLRVTANQIGSLGTGV*GGSAPC Trigger: ACATGGAGCACTACCTCCCAATACACCAGTTCCCAG...AGAGCCTATCTGGTTCGCTGTGACCCTGAGATTCAGGAGCTGCGGCAGTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | AGGATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGGGCCGCGGGTGGTCCTaGAGCCAGTCTTCCACAAAT | + |
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Preference number: 5 (lower is better) Translates to: RMLLTPWRGFGVRQEAKVGRGWS*SQSSTN Trigger: ATTTGTGGAAGACTGGCTCAAGGACCACCCGCGGCC...CACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | ATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGGGGCCGCGGGTGGTCCTaGAGCCAGTCTTCCACAAAT | + |
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Preference number: 5 (lower is better) Translates to: IGILAKVGTLVSEDTVTRGRGWS*SQSSTN Trigger: ATTTGTGGAAGACTGGCTCAAGGACCACCCGCGGCC...CCTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | AATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGCGCTGGCGGATGTGCTaGTCCTCGCGCAGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NRDLGKSGNTGVRGHGHERWRMC*SSRSFF Trigger: GAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCG...CTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS CCA 90 bp | CTTGGGAGGACAGGGCACAGGAGGCATCGCTGGGAACTGGTGTATTaGGAGGTAGTGCTCCATGTTGAAGCCATGAGGAACCAATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LGRTGHRRHRWELVY*EVVLHVEAMRNQFL Trigger: GAGGAATTGGTTCCTCATGGCTTCAACATGGAGCACTACCTCCCAATACACCAGTTCCCAGCGATGCCTCCTGTGCCCTGTCCTCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS CCA 90 bp | AATCTCTGGGTGAACAGGTCTTGGGCTCGACTGTTTCTGCCTTCTTaGGAGGACAGGGCACAGGAGGCATCGCTGGGAACTGGTGTATTG | + |
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Preference number: 5 (lower is better) Translates to: NLWVNRSWARLFLPS*EDRAQEASLGTGVL Trigger: CAATACACCAGTTCCCAGCGATGCCTCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAGTCGAGCCCAAGACCTGTTCACCCAGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGATCTTGGCAAAAGTGGGAACACTGGTGTCAGAGGACACGGTCACGAGGACTGTTTCTGCCTTCTaGGGAGGACAGGGCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: IGILAKVGTLVSEDTVTRTVSAF*GGQGTG Trigger: TCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAGT...CCTCGTGACCGTGTCCTCTGACACCAGTGTTCCCACTTTTGCCAAGATCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | CTAGGGAAAGTACAGACTGGATACATCATCCTTCCATACGGAGCAACTGACGTCCGCTGGCGGATGTGCTaGTCCTCGCGCAGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGKVQTGYIILPYGATDVRWRMC*SSRSFF Trigger: GAAGAAGCTGCGCGAGGACAAGCACATCCGCCAGCG...GACGTCAGTTGCTCCGTATGGAAGGATGATGTATCCAGTCTGTACTTTCCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | CTGCCACTGCCGCAGCTCCTGAATCTCAGGGTCACAGCGAACCAGATAGGCTCTAACATTTTTCTCTCTTaGCTTGGTGAAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPLPQLLNLRVTANQIGSNIFLS*LGEAGW Trigger: CCAGCCTGCTTCACCAAGCAAAGAGAGAAAAATGTT...AGAGCCTATCTGGTTCGCTGTGACCCTGAGATTCAGGAGCTGCGGCAGTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAGGCAGGAAGCTAAAGTGCTTCTGGGAACTGGTGTATaGGGAGGTAGTGCTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: MLLTPWRGFGVRQEAKVLLGTGV*GGSAPC Trigger: ACATGGAGCACTACCTCCCAATACACCAGTTCCCAG...AAGCACTTTAGCTTCCTGCCTGACCCCAAATCCTCTCCACGGTGTCAGCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCACAGTTTTTCTCTCTTTGCTaGGTGAAGCAGGCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SATSGHFKWENPGEQQPQFFSLC*VKQAGH Trigger: ATGGCCAGCCTGCTTCACCAAGCAAAGAGAGAAAAA...CTGTGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS TCA 90 bp | CTCCATGTTGAAGCCATGAGGAACCAATTCCTCCAAGGGCGTGACTaGGCTCACTGTAACCGCAGCTTCCTGCTTCACTTTATAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LHVEAMRNQFLQGRD*AHCNRSFLLHFIAF Trigger: GAAGGCTATAAAGTGAAGCAGGAAGCTGCGGTTACAGTGAGCTCAGTCACGCCCTTGGAGGAATTGGTTCCTCATGGCTTCAACATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098087.9 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCCACGTCTGGGCATTTTAAATGGGAGAATCCTGGCGAGCAGCAGCCATTTTTCTCTCTTTGCTaGGTGAAGCAGGCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSATSGHFKWENPGEQQPFFSLC*VKQAGH Trigger: ATGGCCAGCCTGCTTCACCAAGCAAAGAGAGAAAAA...TGGCTGCTGCTCGCCAGGATTCTCCCATTTAAAATGCCCAGACGTGGCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | GGCCGCGGGTGGTCCTTGAGCCAGTCTTCCACAAATGGAATGGAGAAGAATTCTTTTTTCTCTCTTTGCTaGGTGAAGCAGGCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GRGWSLSQSSTNGMEKNSFFSLC*VKQAGH Trigger: ATGGCCAGCCTGCTTCACCAAGCAAAGAGAGAAAAA...AGAATTCTTCTCCATTCCATTTGTGGAAGACTGGCTCAAGGACCACCCGCGGCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | CCAATAGTGACAGCTCAGAGGATGTTGCTGACACCGTGGAGAGGATTTGGGGTCAACATTTTTCTCTCTTaGCTTGGTGAAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PIVTAQRMLLTPWRGFGVNIFLS*LGEAGW Trigger: CCAGCCTGCTTCACCAAGCAAAGAGAGAAAAATGTT...GACCCCAAATCCTCTCCACGGTGTCAGCAACATCCTCTGAGCTGTCACTATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS TCA 90 bp | AGGGAGCAGAACTGGAAAGATGAACATTTCCAGATAATCTCTGGGTaGACAGGTCTTGGGCTCGACTGTTTCTGCCTTCTTGGGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: REQNWKDEHFQIISG*TGLGLDCFCLLGRT Trigger: TGTCCTCCCAAGAAGGCAGAAACAGTCGAGCCCAAGACCTGTTCACCCAGAGATTATCTGGAAATGTTCATCTTTCCAGTTCTGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTGAATTTGCCAAATGGCAGAGTAGAAGAGGACACTGGCATTTACACAACTGTTTCTGCCTTCTaGGGAGGACAGGGCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: CLLNLPNGRVEEDTGIYTTVSAF*GGQGTG Trigger: TCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAGT...TGTGTAAATGCCAGTGTCCTCTTCTACTCTGCCATTTGGCAAATTCAAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTGAATTTGCCAAATGGCAGAGTAGAAGAGGACACTGGCATTTACACAAACATTTTTCTCTCTTaGCTTGGTGAAGCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: CLLNLPNGRVEEDTGIYTNIFLS*LGEAGW Trigger: CCAGCCTGCTTCACCAAGCAAAGAGAGAAAAATGTT...TGTGTAAATGCCAGTGTCCTCTTCTACTCTGCCATTTGGCAAATTCAAAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106547.2 |
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| CDS CCA 72 bp | AAGGCTCGGCTCCTCCGCCCGCGCGCGTCACCCGCCTaGCGCACAGAGGCTTGGAACGCGCGTCCCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: KARLLRPRASPA*RTEAWNARPGG Trigger: CCCGCCGGGACGCGCGTTCCAAGCCTCTGTGCGCCAGGCGGGTGACGCGCGCGGGCGGAGGAGCCGAGCCTT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208658.2 |
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| CDS TCA 72 bp | AAGGTCGGCTGCTCAGCTTCATACTCCTCGCAGATCTaGTCCCATAGGCTCTTCCCCGGCGGCTCGACGACC | + |
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Preference number: 6 (lower is better) Translates to: KVGCSASYSSQI*SHRLFPGGSTT Trigger: GGTCGTCGAGCCGCCGGGGAAGAGCCTATGGGATCAGATCTGCGAGGAGTATGAAGCTGAGCAGCCGACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS CCA 72 bp | GTGAACAGGTCTTGGGCTCGACTGTTTCTGCCTTCTTaGGAGGACAGGGCACAGGAGGCATCGCTGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: VNRSWARLFLPS*EDRAQEASLGT Trigger: AGTTCCCAGCGATGCCTCCTGTGCCCTGTCCTCCCAAGAAGGCAGAAACAGTCGAGCCCAAGACCTGTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS CCA 72 bp | TGCCTTCTTGGGAGGACAGGGCACAGGAGGCATCGCTaGGAACTGGTGTATTGGGAGGTAGTGCTCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: CLLGRTGHRRHR*ELVYWEVVLHV Trigger: AACATGGAGCACTACCTCCCAATACACCAGTTCCCAGCGATGCCTCCTGTGCCCTGTCCTCCCAAGAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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| CDS TCA 72 bp | GAAGCCATGAGGAACCAATTCCTCCAAGGGCGTGACTaGGCTCACTGTAACCGCAGCTTCCTGCTTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: EAMRNQFLQGRD*AHCNRSFLLHF Trigger: AAAGTGAAGCAGGAAGCTGCGGTTACAGTGAGCTCAGTCACGCCCTTGGAGGAATTGGTTCCTCATGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098087.9 |
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| CDS CCA 72 bp | TGTAACCGCAGCTTCCTGCTTCACTTTATAGCCTTCTaGAAAGGTCGGCTGCTCAGCTTCATACTCCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: CNRSFLLHFIAF*KGRLLSFILLA Trigger: TGCGAGGAGTATGAAGCTGAGCAGCCGACCTTTCCAGAAGGCTATAAAGTGAAGCAGGAAGCTGCGGTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 |
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| CDS TCA 72 bp | AACTGGAAAGATGAACATTTCCAGATAATCTCTGGGTaGACAGGTCTTGGGCTCGACTGTTTCTGCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NWKDEHFQIISG*TGLGLDCFCLL Trigger: AAGAAGGCAGAAACAGTCGAGCCCAAGACCTGTTCACCCAGAGATTATCTGGAAATGTTCATCTTTCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098087.9 ENSMUST00000106547.2 ENSMUST00000152136.8 |
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