Pregenerated sensors for IQCG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035578Ensembl transcript IDs: ENSMUST00000115100.9
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGTGAAAACTAGAGTATCAGACAGTGAGAACTCCCTAGGTCTGTaGGCCAGGAGGTGGGCGCTGGGTCAGCACCCCCAGTGTCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: GVKTRVSDSENSLGL*ARRWALGQHPQCLE Trigger: CTCGAGACACTGGGGGTGCTGACCCAGCGCCCACCTCCTGGCTCACAGACCTAGGGAGTTCTCACTGTCTGATACTCTAGTTTTCACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GGCCTGCGTAGGCAGTGGATGAGAAGGCTCCACTCAGGCTGGGGCTaGAGTACAGTCAGAAGTGTGCCTACTAGCATGCATGGAGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GLRRQWMRRLHSGWG*STVRSVPTSMHGVQ Trigger: TTGGACTCCATGCATGCTAGTAGGCACACTTCTGACTGTACTCCAGCCCCAGCCTGAGTGGAGCCTTCTCATCCACTGCCTACGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | AGGTTCAGAGAGACGCGTGGCCTGGGATTCCCAACATCCCAAAAGTaGAAGCTGGAGGATCAGGATTTGAAGCCCACACCAGGCGATGCA | + |
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Preference number: 1 (lower is better) Translates to: RFRETRGLGFPTSQK*KLEDQDLKPTPGDA Trigger: TGCATCGCCTGGTGTGGGCTTCAAATCCTGATCCTCCAGCTTCCACTTTTGGGATGTTGGGAATCCCAGGCCACGCGTCTCTCTGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | TTAGACTTTGGCTGGAGAGCTGGCTCAGTAGGTAAGAGCACTTACTaGTCTGGCAGGTCAGGGTTCAGTTTCCAACACCCACAAGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: LDFGWRAGSVGKSTY*SGRSGFSFQHPQVG Trigger: ACCGACTTGTGGGTGTTGGAAACTGAACCCTGACCTGCCAGAGCAGTAAGTGCTCTTACCTACTGAGCCAGCTCTCCAGCCAAAGTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | GTGTGCCTACTAGCATGCATGGAGTCCAAGTTCCATTCCCAACGCTaGATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: VCLLACMESKFHSQR*INQVWSLAPVVLAL Trigger: AAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCGTTGGGAATGGAACTTGGACTCCATGCATGCTAGTAGGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | GTTAGGATACAGTTGCGCAGTGTGAGTCAGCACACAGCAGGTCAGTaGTTCTGTTGGGCCCTGTGGCTTCTTACAGGTTTCCAAATTGGA | + |
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Preference number: 1 (lower is better) Translates to: VRIQLRSVSQHTAGQ*FCWALWLLTGFQIG Trigger: TCCAATTTGGAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACTGCGCAACTGTATCCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | GAACCCGTGCCCCATTCTTTACCCCTGGAGGACTGTGTATCTACATaGCATTTCCATCTTGTATCAGATGCTTCCATCCCTATCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: EPVPHSLPLEDCVST*HFHLVSDASIPICP Trigger: GGGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACACAGTCCTCCAGGGGTAAAGAATGGGGCACGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | GAACTTGGATTACTGAAGACCTATCATGGAAGACTAAGCTGGCTGTaGTTTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: ELGLLKTYHGRLSWL*FLHREQARFPCQSQ Trigger: CTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAAAGCACAGCCAGCTTAGTCTTCCATGATAGGTCTTCAGTAATCCAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GGCCGGAGAACCTGCATTTCTACAGACATTGTTTTTCTCAGGCAGTaGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GRRTCISTDIVFLRQ*RPLFEGTQFCGLRA Trigger: TGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCTGTAGAAATGCAGGTTCTCCGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR TCA 90 bp | ACAAAGAGATACATTAGAAGGAAACAATTCTTGGAACCTGTCCTCTaGCTCCACCCCCTGCACACTGTGGCATGCACACGTTTCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: TKRYIRRKQFLEPVL*LHPLHTVACTRFQA Trigger: GGCTTGGAAACGTGTGCATGCCACAGTGTGCAGGGGGTGGAGTCAGAGGACAGGTTCCAAGAATTGTTTCCTTCTAATGTATCTCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR TCA 90 bp | CATTTCTACAGACATTGTTTTTCTCAGGCAGTGGAGACCACTGTTTaGAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCCTACTGCA | + |
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Preference number: 1 (lower is better) Translates to: HFYRHCFSQAVETTV*RHTVLWFEGTTPTA Trigger: TGCAGTAGGGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCTGTAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | CTAAGCTGGCTGTGCTTTCTTCATAGGGAGCAGGCTCGCTTTCCATaGCAGAGCCAGTATTTTCATAGTTGGATGGTAAGCTCTCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: LSWLCFLHREQARFP*QSQYFHSWMVSSLR Trigger: TCTAAGAGAGCTTACCATCCAACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAAAGCACAGCCAGCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | CCTGGAGGACTGTGTATCTACATGCCATTTCCATCTTGTATCAGATaGTTCCATCCCTATCTGTCCCCAGAAAAGTCACTGGAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: PGGLCIYMPFPSCIR*FHPYLSPEKSLELL Trigger: AAGCAGTTCCAGTGACTTTTCTGGGGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACACAGTCCTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GAGACCCAAATAGTACAAAGAGATACATTAGAAGGAAACAATTCTTaGAACCTGTCCTCTGACTCCACCCCCTGCACACTGTGGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: ETQIVQRDTLEGNNS*NLSSDSTPCTLWHA Trigger: TGCATGCCACAGTGTGCAGGGGGTGGAGTCAGAGGACAGGTTCCAAGAATTGTTTCCTTCTAATGTATCTCTTTGTACTATTTGGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GCATGGTTTTCTTGCCAGAGACCAGTCATGGAAAGGCCATTTATCTaGCTCACTGAACCTTTGAGGCTCACAGTCTCTTTCTTAAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: AWFSCQRPVMERPFI*LTEPLRLTVSFLKR Trigger: CCTCTTTAAGAAAGAGACTGTGAGCCTCAAAGGTTCAGTGAGCCAGATAAATGGCCTTTCCATGACTGGTCTCTGGCAAGAAAACCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR TCA 90 bp | TTGACATTACCGAGCAGGGTGGCACATGCTTTTACTCCCAGCTTTTaGGTGACAGAGGAGACAGATCTTATTCACATATTGAGTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LTLPSRVAHAFTPSF*VTEETDLIHILSSR Trigger: CCTGGAACTCAATATGTGAATAAGATCTGTCTCCTCTGTCACTCAAAAGCTGGGAGTAAAAGCATGTGCCACCCTGCTCGGTAATGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | TCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTACAGGTTTCCAAATTaGAAAGGACAACTCATTTGGATATTTAACCTTGCTAGACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SVLLLGPVASYRFPN*KGQLIWIFNLARPQ Trigger: CTGGGGTCTAGCAAGGTTAAATATCCAAATGAGTTGTCCTTTCCAATTTGGAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR TCA 90 bp | TTTCCTGAGACCTTACTTAATGCACTTACCAAACTAATGCAACTCTaGAGGGTTAGGATACAGTTGCGCAGTGTGAGTCAGCACACAGCA | + |
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Preference number: 1 (lower is better) Translates to: FPETLLNALTKLMQL*RVRIQLRSVSQHTA Trigger: TGCTGTGTGCTGACTCACACTGCGCAACTGTATCCTAACCCTTCAGAGTTGCATTAGTTTGGTAAGTGCATTAAGTAAGGTCTCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GACAGACATATTATCTCTGCCAGTTCCCAGGTGTCTACAGCTCAATaGTTTCCACAACTGGACTTCATTCTCTGGAGCATTTGTGAAATC | + |
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Preference number: 1 (lower is better) Translates to: DRHIISASSQVSTAQ*FPQLDFILWSICEI Trigger: GATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCTGGGAACTGGCAGAGATAATATGTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | GGTCCACTGCACTCTACTGGCTTCTGCAGGTACCAGGCACATGCATaGTCTACATTTATACATGAAGGTAAAACACTCATGAATAAAAGT | + |
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Preference number: 1 (lower is better) Translates to: GPLHSTGFCRYQAHA*STFIHEGKTLMNKS Trigger: ACTTTTATTCATGAGTGTTTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCCAGTAGAGTGCAGTGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | CCAGTAGCATGTAATAAACACTTTAAATTGTTCCAGCCTAAAGCATaGTTTTCTTGCCAGAGACCAGTCATGGAAAGGCCATTTATCTGG | + |
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Preference number: 1 (lower is better) Translates to: PVACNKHFKLFQPKA*FSCQRPVMERPFIW Trigger: CCAGATAAATGGCCTTTCCATGACTGGTCTCTGGCAAGAAAACCATGCTTTAGGCTGGAACAATTTAAAGTGTTTATTACATGCTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CCA 90 bp | CCTGTGGCTTCTTACAGGTTTCCAAATTGGAAAGGACAACTCATTTaGATATTTAACCTTGCTAGACCCCAGCGGGAAATAAAGATAAAG | + |
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Preference number: 1 (lower is better) Translates to: PVASYRFPNWKGQLI*IFNLARPQREIKIK Trigger: CTTTATCTTTATTTCCCGCTGGGGTCTAGCAAGGTTAAATATCCAAATGAGTTGTCCTTTCCAATTTGGAAACCTGTAAGAAGCCACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | TGTAATAAACACTTTAAATTGTTCCAGCCTAAAGCATGGTTTTCTTaGCAGAGACCAGTCATGGAAAGGCCATTTATCTGGCTCACTGAA | + |
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Preference number: 1 (lower is better) Translates to: CNKHFKLFQPKAWFS*QRPVMERPFIWLTE Trigger: TTCAGTGAGCCAGATAAATGGCCTTTCCATGACTGGTCTCTGGCAAGAAAACCATGCTTTAGGCTGGAACAATTTAAAGTGTTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR GCA 90 bp | ATAATATTTCTCCTTGTTCGTGCAGAAAAGTATTCATTAGAACGCTaGCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IIFLLVRAEKYSLER*HFYSSFKACNSSQA Trigger: TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAATGAATACTTTTCTGCACGAACAAGGAGAAATATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR TCA 90 bp | AGGCCACTAGACTACGTAGTGAATTTGAAACCAACCTGGGCCACATaGGACCCTGCATCAAAAAGTTTAAATTTTATATTCATGAAATAT | + |
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Preference number: 1 (lower is better) Translates to: RPLDYVVNLKPTWAT*DPASKSLNFIFMKY Trigger: ATATTTCATGAATATAAAATTTAAACTTTTTGATGCAGGGTCTCATGTGGCCCAGGTTGGTTTCAAATTCACTACGTAGTCTAGTGGCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCAACTCCCTAGGTCTGTaGGCCAGGAGGTGGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPNSLGL*ARRWAL Trigger: CAGCGCCCACCTCCTGGCTCACAGACCTAGGGAGTT...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCAGGCAGAGCAGTGGGTaGCTTCCAATCCAGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPRQSSG*LPIQQL Trigger: GAGCTGCTGGATTGGAAGCCACCCACTGCTCTGCCT...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCTCCACTGCACTCTACTaGCTTCTGCAGGTACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPSTALY*LLQVPG Trigger: GCCTGGTACCTGCAGAAGCCAGTAGAGTGCAGTGGA...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR GCA 90 bp | CGCTGCATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTTAGGAGGCTGCACACTGTGGCATaGACACGTTTCCAAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RCINQVWSLAPVVLALRRLHTVA*TRFQAW Trigger: CCAGGCTTGGAAACGTGTGCATGCCACAGTGTGCAG...CCTCCTAAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCAACCTGGGCCACATaGGACCCTGCATCAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LRQWRPLFEGTQFCGLRAPTWAT*DPASKS Trigger: ACTTTTTGATGCAGGGTCTCATGTGGCCCAGGTTGG...TGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCTACAGTTGCGCAGTGTaGGTCAGCACACAGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSYSCAV*VSTQQV Trigger: GACCTGCTGTGTGCTGACTCACACTGCGCAACTGTA...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCGTTATGTCAGCAGTCTaGAGGCTGCCAGGCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSVMSAV*RLPGTL Trigger: CAGAGTGCCTGGCAGCCTGCAGACTGCTGACATAAC...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCACCAGGAGGTGGGCGCTaGGTCAGCACCCCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LERCHFYSSFKACNSSQAPGGGR*VSTPSV Trigger: GACACTGGGGGTGCTGACCCAGCGCCCACCTCCTGG...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCCACAGCTACTCAACTTaGCTCCCCACAGTCCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSHSYST*LPTVPS Trigger: AGACGGGACTGTGGGGAGCCAAGTTGAGTAGCTGTG...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CAA 90 bp | ACAGTTGCGCAGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTaGGGCCCTGTGGCTTCTTACAGGTTTCCAAATTGGAAAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: TVAQCESAHSRSVLL*GPVASYRFPNWKGQ Trigger: TTGTCCTTTCCAATTTGGAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACTGCGCAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCGCCAGAGACCAGTCATaGAAAGGCCATTTATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSARDQS*KGHLSG Trigger: GCCAGATAAATGGCCTTTCCATGACTGGTCTCTGGC...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCAAGCCAAGTGTCTGCCTaGCTCTGCCCTGCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: LERCHFYSSFKACNSSQASQVSA*LCPATC Trigger: GCAGGTGGCAGGGCAGAGCCAGGCAGACACTTGGCT...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTTGCCTGGCTCTGCCCTaGCACCTGCAGAGATGTTAT | + |
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Preference number: 2 (lower is better) Translates to: FFIGSRLAFHARASIFIVCLALP*HLQRCY Trigger: ATAACATCTCTGCAGGTGGCAGGGCAGAGCCAGGCA...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCAGAAAGGCCATTTATCTaGCTCACTGAACCTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LRQWRPLFEGTQFCGLRAERPFI*LTEPLR Trigger: CCTCAAAGGTTCAGTGAGCCAGATAAATGGCCTTTC...TGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CAA 90 bp | CTCAGGCAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTaGAGGGCACCACCCCTACTGCATTTTCAACCACATTTCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: LRQWRPLFEGTQFCG*RAPPLLHFQPHFNQ Trigger: TTGATTGAAATGTGGTTGAAAATGCAGTAGGGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCGCACATGATGCTAGGTaGGAATTCACTTTTGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPAHDAR*EFTFAY Trigger: ATAAGCAAAAGTGAATTCTCACCTAGCATCATGTGC...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CGCTGCATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTTAGGAGGCACATATACACTGGTTaGTTGGTTGGTTGGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: RCINQVWSLAPVVLALRRHIYTG*LVGWLV Trigger: AACCAACCAACCAACCAACCAACCAGTGTATATGTG...CCTCCTAAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCTTCCAGCCTAAAGCATaGTTTTCTTGCCAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSFQPKA*FSCQRP Trigger: TGGTCTCTGGCAAGAAAACCATGCTTTAGGCTGGAA...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCACATTACCGAGCAGGGTaGCACATGCTTTTACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPHYRAG*HMLLLP Trigger: TGGGAGTAAAAGCATGTGCCACCCTGCTCGGTAATG...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR CAA 90 bp | ATCAAAGGTTGGGATGTGGCCGGAGAACCTGCATTTCTACAGACATaGTTTTTCTCAGGCAGTGGAGACCACTGTTTGAAGGCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: IKGWDVAGEPAFLQT*FFSGSGDHCLKAHS Trigger: ACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCTGTAGAAATGCAGGTTCTCCGGCCACATCCCAACCTTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCACAACTGGACTTCATTCTCTGGAGCATTTGTGAAATCCAGATTTGCATCACCTCTGGAGAACCCGTaGCCCATTCTTTACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FHNWTSFSGAFVKSRFASPLENP*PILYPW Trigger: CCAGGGGTAAAGAATGGGGCACGGGTTCTCCAGAGG...TGATGCAAATCTGGATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCAGGAACTTTCCTATCTaGCTAGAACAGACTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPRNFPI*LEQTRK Trigger: TTTTCTAGTCTGTTCTAGGCAGATAGGAAAGTTCCT...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGTCTACAGCTCAATGGTTTCCACAACTGGACTTCATTCTCTGGAGCATTTGGCTCACTGAACCTTTaGGGCTCACAGTCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RCLQLNGFHNWTSFSGAFGSLNL*GSQSLS Trigger: AGAAAGAGACTGTGAGCCTCAAAGGTTCAGTGAGCC...AAATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTGTTGGTTGGTTTGGTTaGTTTCTTTACGTCTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVSQHTAGQCFCWALWLLVGWFG*FLYVLK Trigger: TTTTAAGACGTAAAGAAACCAACCAAACCAACCAAC...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCAGAAGGAAACAATTCTTaGAACCTGTCCTCTGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPEGNNS*NLSSDS Trigger: GGAGTCAGAGGACAGGTTCCAAGAATTGTTTCCTTC...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 90 bp | GTTGACATTACCGAGCAGGGTGGCACATGCTTTTACTCCCAGCTTTaGAGTGACAGAGGAGACAGATCTTATTCACATATTGAGTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VDITEQGGTCFYSQL*SDRGDRSYSHIEFQ Trigger: CTGGAACTCAATATGTGAATAAGATCTGTCTCCTCTGTCACTCAAAAGCTGGGAGTAAAAGCATGTGCCACCCTGCTCGGTAATGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCACAACTGGACTTCATTCTCTGGAGCATTTGTGAAATCCAGATTTGCATCAGCACAGAGCCTTCTCTaGCCCAGAGTTTGGACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FHNWTSFSGAFVKSRFASAQSLL*PRVWTL Trigger: AAGAGTCCAAACTCTGGGGCAGAGAAGGCTCTGTGC...TGATGCAAATCTGGATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 90 bp | GAGCCTTCATTTAAACACAGCACAGAGCCTTCTCTGCCCCAGAGTTaGGACTCTTTAGTTGTTGTATCTTTGGTGTTTGCTGCAGTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: EPSFKHSTEPSLPQS*DSLVVVSLVFAAVR Trigger: TCTAACTGCAGCAAACACCAAAGATACAACAACTAAAGAGTCCAAACTCTGGGGCAGAGAAGGCTCTGTGCTGTGTTTAAATGAAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCACTCCCAGCTTTTGAGTaGCAGAGGAGACAGATCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LERCHFYSSFKACNSSQALPAFE*QRRQIL Trigger: TAAGATCTGTCTCCTCTGTCACTCAAAAGCTGGGAG...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 90 bp | GCTCAGCAGGAAAAGGGGCTTGCTGCCAAGTCCAATGACTTGAGTTaGATATCTGAGACCCAAATAGTACAAAGAGATACATTAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AQQEKGLAAKSNDLS*ISETQIVQRDTLEG Trigger: TCCTTCTAATGTATCTCTTTGTACTATTTGGGTCTCAGATATCAAACTCAAGTCATTGGACTTGGCAGCAAGCCCCTTTTCCTGCTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCACTTGAGTTTGATATCTaGGACCCAAATAGTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPLEFDI*DPNSTK Trigger: CTTTGTACTATTTGGGTCTCAGATATCAAACTCAAG...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCATACCAGGCACATGCATaGTCTACATTTATACATGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPYQAHA*STFIHE Trigger: TTCATGTATAAATGTAGACCATGCATGTGCCTGGTA...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCTGCAGGTACCAGGCACATGCATGGTCTACATTTATACATGAAGGTAAACCTTTTTCATTGCAGTaGGATGGTTTACAGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: GFCRYQAHAWSTFIHEGKPFSLQ*DGLQQI Trigger: AATCTGCTGTAAACCATCTCACTGCAATGAAAAAGG...TTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCAGACTGTGTATCTACATaGCATTTCCATCTTGTATCA | + |
|
Preference number: 2 (lower is better) Translates to: LERCHFYSSFKACNSSQADCVST*HFHLVS Trigger: TGATACAAGATGGAAATGGCATGTAGATACACAGTC...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCCACAACTGGACTTCATTCTCTGGAGCATTTGTGAAATCCAGATTTGCATCAATACAACACTTGGAATaGCTACAAGAGTTCCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FHNWTSFSGAFVKSRFASIQHLE*LQEFLK Trigger: TTTTAGGAACTCTTGTAGCCATTCCAAGTGTTGTAT...TGATGCAAATCTGGATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TGCCTTGGTGAACCCTGCGTTCTGATCCCAGGCTCCTaGACCAGGCACAGCAGACTCGGCTCCTGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLGEPCVLIPGS*TRHSRLGSCSW Trigger: CCAGGAGCAGGAGCCGAGTCTGCTGTGCCTGGTCCAGGAGCCTGGGATCAGAACGCAGGGTTCACCAAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | GGTACAGATAGCAGGCTGGCCTGCGTAGGCAGTGGATaGGAAGGCTCCACTCAGGCTGGGGCTGGAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: GTDSRLACVGSG*EGSTQAGAGVQ Trigger: CTGTACTCCAGCCCCAGCCTGAGTGGAGCCTTCTCATCCACTGCCTACGCAGGCCAGCCTGCTATCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | TGCCCTGCCACCTGCAGAGATGTTATGTCAGCAGTCTaGAGGCTGCCAGGCACTCTGACCAGGATTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPATCRDVMSAV*RLPGTLTRIPL Trigger: CAGGGGAATCCTGGTCAGAGTGCCTGGCAGCCTGCAGACTGCTGACATAACATCTCTGCAGGTGGCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | GCAGAGTGGCAGCCAGAGCTTGCCTATGACCAGCTGTaGTGCTGGACCGCAGATTTGCTTCCTCTAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AEWQPELAYDQL*CWTADLLPLGS Trigger: GCTGCCTAGAGGAAGCAAATCTGCGGTCCAGCAGCACAGCTGGTCATAGGCAAGCTCTGGCTGCCACTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TGGAACCTGTCCTCTGACTCCACCCCCTGCACACTGTaGCATGCACACGTTTCCAAGCCTGGGCCCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: WNLSSDSTPCTL*HAHVSKPGPTY Trigger: ATATGTGGGCCCAGGCTTGGAAACGTGTGCATGCCACAGTGTGCAGGGGGTGGAGTCAGAGGACAGGTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | GCATGCACTGCCCAGCAATGTTTGCATTTGCCTTGGTaGACCCTGCGTTCTGATCCCAGGCTCCTGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACTAQQCLHLPW*TLRSDPRLLDQ Trigger: CTGGTCCAGGAGCCTGGGATCAGAACGCAGGGTTCACCAAGGCAAATGCAAACATTGCTGGGCAGTGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | CCCCTGCACACTGTGGCATGCACACGTTTCCAAGCCTaGGCCCACATATACACTGGTTGGTTGGTTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLHTVACTRFQA*AHIYTGWLVGW Trigger: CCAACCAACCAACCAACCAGTGTATATGTGGGCCCAGGCTTGGAAACGTGTGCATGCCACAGTGTGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | AACAATTCTTGGAACCTGTCCTCTGACTCCACCCCCTaGACACTGTGGCATGCACACGTTTCCAAGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NNSWNLSSDSTP*TLWHAHVSKPG Trigger: CCCAGGCTTGGAAACGTGTGCATGCCACAGTGTGCAGGGGGTGGAGTCAGAGGACAGGTTCCAAGAATTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | CAGTTGCGCAGTGTGAGTCAGCACACAGCAGGTCAGTaGTTCTGTTGGGCCCTGTGGCTTCTTACAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLRSVSQHTAGQ*FCWALWLLTGF Trigger: GAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACTGCGCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGCTGGCTCAGTAGGTAAGAGCACTTACTaGTCTGGCAGGTCAGGGTTCAGTTTCCAACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GWRAGSVGKSTY*SGRSGFSFQHP Trigger: TGGGTGTTGGAAACTGAACCCTGACCTGCCAGAGCAGTAAGTGCTCTTACCTACTGAGCCAGCTCTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | AGGCAGTGGATGAGAAGGCTCCACTCAGGCTGGGGCTaGAGTACAGTCAGAAGTGTGCCTACTAGCATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RQWMRRLHSGWG*STVRSVPTSMH Trigger: ATGCATGCTAGTAGGCACACTTCTGACTGTACTCCAGCCCCAGCCTGAGTGGAGCCTTCTCATCCACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | CAAGCCACCGCCCACTGGGCTGTATTAGACTTTGGCTaGAGAGCTGGCTCAGTAGGTAAGAGCACTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: QATAHWAVLDFG*RAGSVGKSTYC Trigger: GCAGTAAGTGCTCTTACCTACTGAGCCAGCTCTCCAGCCAAAGTCTAATACAGCCCAGTGGGCGGTGGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | GAGACGCGTGGCCTGGGATTCCCAACATCCCAAAAGTaGAAGCTGGAGGATCAGGATTTGAAGCCCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: ETRGLGFPTSQK*KLEDQDLKPTP Trigger: TGGTGTGGGCTTCAAATCCTGATCCTCCAGCTTCCACTTTTGGGATGTTGGGAATCCCAGGCCACGCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTAGCAGGAAAAGGGGCTaGCTGCCAAGTCCAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: SVSQHTAGQCFCWALWLLSRKRG*LPSPMT Trigger: AGTCATTGGACTTGGCAGCAAGCCCCTTTTCCTGCT...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TGGCAGCCAGAGCTTGCCTATGACCAGCTGTGCTGCTaGACCGCAGATTTGCTTCCTCTAGGCAGCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WQPELAYDQLCC*TADLLPLGSIK Trigger: TTTAATGCTGCCTAGAGGAAGCAAATCTGCGGTCCAGCAGCACAGCTGGTCATAGGCAAGCTCTGGCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTCATGCCATTTCCATCTaGTATCAGATGCTTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SVSQHTAGQCFCWALWLLHAISI*YQMLPS Trigger: GGATGGAAGCATCTGATACAAGATGGAAATGGCATG...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTaGGCCCTGTGGCTTCTTACAGGTTTCCAAATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVSQHTAGQCFC*ALWLLTGFQIG Trigger: TCCAATTTGGAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | TACATTAGAAGGAAACAATTCTTGGAACCTGTCCTCTaGCTCCACCCCCTGCACACTGTGGCATGCACACGT | + |
|
Preference number: 3 (lower is better) Translates to: YIRRKQFLEPVL*LHPLHTVACTR Trigger: ACGTGTGCATGCCACAGTGTGCAGGGGGTGGAGTCAGAGGACAGGTTCCAAGAATTGTTTCCTTCTAATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | AGACATTGTTTTTCTCAGGCAGTGGAGACCACTGTTTaGAGGCACACAGTTCTGTGGTTTGAGGGCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: RHCFSQAVETTV*RHTVLWFEGTT Trigger: GGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTCTAGACAGTGGTTCCTaGCTCACCCTGCTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FFIGSRLAFHARASIFIVLDSGS*LTLLFP Trigger: AGGAAACAGCAGGGTGAGCAAGGAACCACTGTCTAG...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | CCTGAACAGACACACTCCACACACAGTTGTAAGCTCTaGAGTGTAGCATGCACTGCCCAGCAATGTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PEQTHSTHSCKL*SVACTAQQCLH Trigger: ATGCAAACATTGCTGGGCAGTGCATGCTACACTTCAGAGCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | CTGTGCTTTCTTCATAGGGAGCAGGCTCGCTTTCCATaGCAGAGCCAGTATTTTCATAGTTGGATGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCFLHREQARFP*QSQYFHSWMVS Trigger: GCTTACCATCCAACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAAAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | TTACTGAAGACCTATCATGGAAGACTAAGCTGGCTGTaGTTTCTTCATAGGGAGCAGGCTCGCTTTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKTYHGRLSWL*FLHREQARFPC Trigger: GCATGGAAAGCGAGCCTGCTCCCTATGAAGAAAGCACAGCCAGCTTAGTCTTCCATGATAGGTCTTCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TCTGAAGAGGTCCTACAGCCATGTGATAGCCCTCACTaGGGTGTGAAAACTAGAGTATCAGACAGTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SEEVLQPCDSPH*GVKTRVSDSEN Trigger: GTTCTCACTGTCTGATACTCTAGTTTTCACACCCCAGTGAGGGCTATCACATGGCTGTAGGACCTCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TCTTGCCAGAGACCAGTCATGGAAAGGCCATTTATCTaGCTCACTGAACCTTTGAGGCTCACAGTCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SCQRPVMERPFI*LTEPLRLTVSF Trigger: GAAAGAGACTGTGAGCCTCAAAGGTTCAGTGAGCCAGATAAATGGCCTTTCCATGACTGGTCTCTGGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCACCACATATACACTGGTaGGTTGGTTGGTTGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPPHIHW*VGWLVG Trigger: ACCAACCAACCAACCAACCAACCAGTGTATATGTGG...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCTGCAGGTACCAGGCACATGCATGGTCTACATTTATACATGAAGGTAAATGCTGGACCGCAGATTaGCTTCCTCTAGGCAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: GFCRYQAHAWSTFIHEGKCWTAD*LPLGSI Trigger: AATGCTGCCTAGAGGAAGCAAATCTGCGGTCCAGCA...TTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | GAAGGAGCCTGCTGTTTCTTTGCCTCTAGTCAGCAGTaGCTAATAATGTGGTATGCTGACGAGTCTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGACCFFASSQQ*LIMWYADESDG Trigger: TCCATCAGACTCGTCAGCATACCACATTATTAGTCACTGCTGACTAGAGGCAAAGAAACAGCAGGCTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | GACTTCATTCTCTGGAGCATTTGTGAAATCCAGATTTaGATCAAAGGTTGGGATGTGGCCGGAGAACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DFILWSICEIQI*IKGWDVAGEPA Trigger: TGCAGGTTCTCCGGCCACATCCCAACCTTTGATGCAAATCTGGATTTCACAAATGCTCCAGAGAATGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | CTTGGATTACTGAAGACCTATCATGGAAGACTAAGCTaGCTGTGCTTTCTTCATAGGGAGCAGGCTCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGLLKTYHGRLS*LCFLHREQARF Trigger: AAAGCGAGCCTGCTCCCTATGAAGAAAGCACAGCCAGCTTAGTCTTCCATGATAGGTCTTCAGTAATCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCTGCAGGTACCAGGCACATGCATGGTCTACATTTATACATGAAGGTAAAGACTACGTAGTGAATTaGAAACCAACCTGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GFCRYQAHAWSTFIHEGKDYVVN*KPTWAT Trigger: TGTGGCCCAGGTTGGTTTCAAATTCACTACGTAGTC...TTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | ACCTGCATTTCTACAGACATTGTTTTTCTCAGGCAGTaGAGACCACTGTTTGAAGGCACACAGTTCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCISTDIVFLRQ*RPLFEGTQFCG Trigger: ACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCTGTAGAAATGCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | GTTCCCAGGTGTCTACAGCTCAATGGTTTCCACAACTaGACTTCATTCTCTGGAGCATTTGTGAAATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPRCLQLNGFHN*TSFSGAFVKSR Trigger: TCTGGATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCTGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | ATTATCTCTGCCAGTTCCCAGGTGTCTACAGCTCAATaGTTTCCACAACTGGACTTCATTCTCTGGAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: IISASSQVSTAQ*FPQLDFILWSI Trigger: AATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCTGGGAACTGGCAGAGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | ACAACACTTGGAATGGCTACAAGAGTTCCTAAAAGTTaGCATTACCGAGCAGGGTGGCACATGCTTTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: TTLGMATRVPKS*HYRAGWHMLLL Trigger: GAGTAAAAGCATGTGCCACCCTGCTCGGTAATGTCAACTTTTAGGAACTCTTGTAGCCATTCCAAGTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | CTGTGTATCTACATGCCATTTCCATCTTGTATCAGATaGTTCCATCCCTATCTGTCCCCAGAAAAGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LCIYMPFPSCIR*FHPYLSPEKSL Trigger: CAGTGACTTTTCTGGGGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | TTTTACGACTTAACTATGAGCCAGTTAGCTGCTTTCTaGAGCGAGAAGAAGGATGCTCACACAGCTACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FYDLTMSQLAAF*SEKKDAHTATQ Trigger: TTGAGTAGCTGTGTGAGCATCCTTCTTCTCGCTCCAGAAAGCAGCTAACTGGCTCATAGTTAAGTCGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | CACTCTACTGGCTTCTGCAGGTACCAGGCACATGCATaGTCTACATTTATACATGAAGGTAAAACACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: HSTGFCRYQAHA*STFIHEGKTLM Trigger: CATGAGTGTTTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCCAGTAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTTTGTATCTTTGGTGTTaGCTGCAGTTAGAACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FFIGSRLAFHARASIFIVLYLWC*LQLEPK Trigger: TTTGGGTTCTAACTGCAGCAAACACCAAAGATACAA...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | ACCTTACTTAATGCACTTACCAAACTAATGCAACTCTaGAGGGTTAGGATACAGTTGCGCAGTGTGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLNALTKLMQL*RVRIQLRSVSQ Trigger: CTGACTCACACTGCGCAACTGTATCCTAACCCTTCAGAGTTGCATTAGTTTGGTAAGTGCATTAAGTAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | CACTTTAAATTGTTCCAGCCTAAAGCATGGTTTTCTTaGCAGAGACCAGTCATGGAAAGGCCATTTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HFKLFQPKAWFS*QRPVMERPFIW Trigger: CCAGATAAATGGCCTTTCCATGACTGGTCTCTGGCAAGAAAACCATGCTTTAGGCTGGAACAATTTAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CCA 72 bp | GCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTaGATGGTAAGCTCTCTTAGAGGACAGACATATTAT | + |
|
Preference number: 3 (lower is better) Translates to: ARFPCQSQYFHS*MVSSLRGQTYY Trigger: ATAATATGTCTGTCCTCTAAGAGAGCTTACCATCCAACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACAACTGGACTTCATTCTCTGGAGCATTTGTGAAATCCAGATTTGCATCATCTGTAAATACATCCTaGCAACTAATGAAGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FHNWTSFSGAFVKSRFASSVNTS*QLMKEP Trigger: AGGCTCCTTCATTAGTTGCAAGGATGTATTTACAGA...TGATGCAAATCTGGATTTCACAAATGCTCCAGAGAATGAAGTCCAGTTGTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR GCA 72 bp | CTCCTTGTTCGTGCAGAAAAGTATTCATTAGAACGCTaGCACTTTTATTCAAGTTTCAAAGCATGTAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLVRAEKYSLER*HFYSSFKACNS Trigger: GCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAATGAATACTTTTCTGCACGAACAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR TCA 72 bp | GACTACGTAGTGAATTTGAAACCAACCTGGGCCACATaGGACCCTGCATCAAAAAGTTTAAATTTTATATTC | + |
|
Preference number: 3 (lower is better) Translates to: DYVVNLKPTWAT*DPASKSLNFIF Trigger: GAATATAAAATTTAAACTTTTTGATGCAGGGTCTCATGTGGCCCAGGTTGGTTTCAAATTCACTACGTAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCATCGTGGCTGGCTTTCTaGGTGAGGCTCTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQWRPLFEGTQFCGLRASWLAF*VRLCLL Trigger: AAGAAGGCAGAGCCTCACCCAGAAAGCCAGCCACGA...TGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCACCTCGCCACCAGGCCTaGAGCTTCACGATGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPPRHQA*SFTMLL Trigger: GAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGG...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | CAGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTaGGGCCCTGTGGCTTCTTACAGGTTTCCAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCESAHSRSVLL*GPVASYRFPNW Trigger: CCAATTTGGAAACCTGTAAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | CCACCACCACCCCATCTTTTTCTAGACAGTGGTTCCTaGCTCACCCTGCTGTTTCCTGAACAGACACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPHLFLDSGS*LTLLFPEQTHS Trigger: GGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGGAACCACTGTCTAGAAAAAGATGGGGTGGTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCAGGCTGGCTTTCTGGGTaGGGCTCTGCCTTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPGWLSG*GSAFFH Trigger: ATGAAAGAAGGCAGAGCCTCACCCAGAAAGCCAGCC...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | GTGTTTTATGTGCTGTCCCCCAACACCACCAACCCTAGACTAATGGTCGCCCTGCTTTCAGGAGACTGGTaGAAGAGCCAGAATCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFYVLSPNTTNPRLMVALLSGDW*KSQNLA Trigger: TGCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAG...CAGGGCGACCATTAGTCTAGGGTTGGTGGTGTTGGGGGACAGCACATAAAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | AGAACCCGTGCCCCATTCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTCTCCCGGATCATCTTTaGCAGGTCTTGCAGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRAPFFTPGGLCIYMPFLPDHL*QVLQVY Trigger: GTACACCTGCAAGACCTGGCAAAGATGATCCGGGAG...AAATGGCATGTAGATACACAGTCCTCCAGGGGTAAAGAATGGGGCACGGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTCGCCCTGCAAGACAGGCAGAGCCAATGTTTATTAACTACATGTGCGTGCATAGATGCTCCTTCGTaGCTGGCTTTCTGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVALQDRQSQCLLTTCACIDAPS*LAFWVR Trigger: CCTCACCCAGAAAGCCAGCCACGAAGGAGCATCTAT...GCACGCACATGTAGTTAATAAACATTGGCTCTGCCTGTCTTGCAGGGCGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | CGCTGCATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTTAGGAGGCATTTCTTCTGGGTCTaGGAAATCTGCAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCINQVWSLAPVVLALRRHFFWV*EICSSA Trigger: TGCTGAGCTGCAGATTTCCCAGACCCAGAAGAAATG...CCTCCTAAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | CTTGCCTATGACCAGCTGTGCTGCTGGACCGCAGATTaGCTTCCTCTAGGCAGCATTAAACCTCAGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAYDQLCCWTAD*LPLGSIKPQHH Trigger: ATGATGCTGAGGTTTAATGCTGCCTAGAGGAAGCAAATCTGCGGTCCAGCAGCACAGCTGGTCATAGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | TGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTaGAGGGCACCACCCCTACTGCATTTTCAACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WRPLFEGTQFCG*RAPPLLHFQPH Trigger: ATGTGGTTGAAAATGCAGTAGGGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTAAAGAGCCAGAATCTTaGATCTCCATCATGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQHTAGQCFCWALWLLKEPES*ISIMAF Trigger: AAATGCCATGATGGAGATGCAAGATTCTGGCTCTTT...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | CCCTGGAGGACTGTGTATCTACATGCCATTTCCATCTaGTATCAGATGCTTCCATCCCTATCTGTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWRTVYLHAISI*YQMLPSLSVPR Trigger: TCTGGGGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACACAGTCCTCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | TGGGATGTGGCCGGAGAACCTGCATTTCTACAGACATaGTTTTTCTCAGGCAGTGGAGACCACTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WDVAGEPAFLQT*FFSGSGDHCLK Trigger: CTTCAAACAGTGGTCTCCACTGCCTGAGAAAAACAATGTCTGTAGAAATGCAGGTTCTCCGGCCACATCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCTTTGACGCTCCCTTTTaGCATCAAGTAACTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPFDAPF*HQVTVF Trigger: AAAAACAGTTACTTGATGTCAAAAGGGAGCGTCAAA...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | CGCTGCATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTTAGGAGGCTTTCTTGGGCATTTTaGAATTGCCAATTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCINQVWSLAPVVLALRRLSWAF*NCQFPS Trigger: GGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAG...CCTCCTAAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTTTAAAGGTAAAGTCCTaGCCTCTCTGTTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQHTAGQCFCWALWLLLKVKS*PLCLFS Trigger: AGAAAACAAACAGAGAGGGCAGGACTTTACCTTTAA...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | AGAACCCGTGCCCCATTCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTTGGGTCTGGGAAATCTaGAGCTCAGCATTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTRAPFFTPGGLCIYMPFWVWEI*SSAFLF Trigger: GAAAAGAAATGCTGAGCTGCAGATTTCCCAGACCCA...AAATGGCATGTAGATACACAGTCCTCCAGGGGTAAAGAATGGGGCACGGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTATCTTTGCCAGGTCTTaGAGGTGTACCAGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FFIGSRLAFHARASIFIVIFARS*RCTRSL Trigger: CAGTGACCTGGTACACCTGCAAGACCTGGCAAAGAT...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | AGGACTGAAGGAAAGACGGTTCTTACAGTCCATGCAGGTAACAGCCAGTTTCCACGGTTACATTTCTTCTaGGTCTGGGAAATCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEGKTVLTVHAGNSQFPRLHFF*VWEICS Trigger: GCTGCAGATTTCCCAGACCCAGAAGAAATGTAACCG...TGGAAACTGGCTGTTACCTGCATGGACTGTAAGAACCGTCTTTCCTTCAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | GCACCTAAAAGTAACTTTAAGACTGGACCAGGGTTCCATCCCCAGCATCACCTGTTCTGTACTTGCATTTaGCGCTCCCTTTTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: APKSNFKTGPGFHPQHHLFCTCI*RSLLTS Trigger: TGATGTCAAAAGGGAGCGTCAAATGCAAGTACAGAA...CAGGTGATGCTGGGGATGGAACCCTGGTCCAGTCTTAAAGTTACTTTTAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCGCCCTGCAAGACAGGCAGAGCCAATGTTTATTAACTACATGTGCGTGCGCATTTAACTCGTTCTaGTTTGCTTCTGTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVALQDRQSQCLLTTCACAFNSF*FASVSL Trigger: CAAAGACACAGAAGCAAAGCAGAACGAGTTAAATGC...GCACGCACATGTAGTTAATAAACATTGGCTCTGCCTGTCTTGCAGGGCGACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCAAAGATTCTCCAAGTTaGTTTTCGCCTTCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSKDSPS*FSPSSL Trigger: AAGAGATGAAGGCGAAAACCAACTTGGAGAATCTTT...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | ACCGAGCAGGGTGGCACATGCTTTTACTCCCAGCTTTaGAGTGACAGAGGAGACAGATCTTATTCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: TEQGGTCFYSQL*SDRGDRSYSHI Trigger: AATATGTGAATAAGATCTGTCTCCTCTGTCACTCAAAAGCTGGGAGTAAAAGCATGTGCCACCCTGCTCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | TGTATCTACATGCCATTTCCATCTTGTATCAGATGCTTCCATCCCTATCTGTCCTGCTGTCTCTTTCTTTaGCCAAGGCTTTCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CIYMPFPSCIRCFHPYLSCCLFL*PRLSGD Trigger: GTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCA...GGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCGCCCTGCAAGACAGGCAGAGCCAATGTTTATTAACTACATGTGCGTGCTGCCTTTCGAGTCTTTaGTGTCATCTTTATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVALQDRQSQCLLTTCACCLSSL*CHLYLS Trigger: AGAAAGATAAAGATGACAGCAAAGACTCGAAAGGCA...GCACGCACATGTAGTTAATAAACATTGGCTCTGCCTGTCTTGCAGGGCGACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCTACAGCTCAATGGTTTCCACAACTGGACTTCATTCTCTGGAGCATTTTCTTCTCCTTCTCCTTaGCTTTCGAGTCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCLQLNGFHNWTSFSGAFSSPSP*LSSLCC Trigger: ACAGCAAAGACTCGAAAGGCAAGGAGAAGGAGAAGA...AAATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | CAGCAGGAAAAGGGGCTTGCTGCCAAGTCCAATGACTaGAGTTTGATATCTGAGACCCAAATAGTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQEKGLAAKSND*SLISETQIVQR Trigger: TCTTTGTACTATTTGGGTCTCAGATATCAAACTCAAGTCATTGGACTTGGCAGCAAGCCCCTTTTCCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTTATTGCCTGTCATTCTaGATTTTCTTCAGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFIGSRLAFHARASIFIVYCLSF*IFFSVS Trigger: GGAGACACTGAAGAAAATTCAGAATGACAGGCAATA...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | AGAACCCGTGCCCCATTCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTCTTGTGATGACATCATaGAAATTCATTTTGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRAPFFTPGGLCIYMPFLVMTS*KFILLS Trigger: AGACAGCAAAATGAATTTCCATGATGTCATCACAAG...AAATGGCATGTAGATACACAGTCCTCCAGGGGTAAAGAATGGGGCACGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | TTTAAACACAGCACAGAGCCTTCTCTGCCCCAGAGTTaGGACTCTTTAGTTGTTGTATCTTTGGTGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKHSTEPSLPQS*DSLVVVSLVFA Trigger: AGCAAACACCAAAGATACAACAACTAAAGAGTCCAAACTCTGGGGCAGAGAAGGCTCTGTGCTGTGTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR TCA 90 bp | TATGCTGACGAGTCTGATGGACTTTTAAGAACTAAGTACTTAGATGGTTGTAGACTGTCACCACCACAGTaGCCTCAGGTTGTAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YADESDGLLRTKYLDGCRLSPPQ*PQVVKP Trigger: AGGTTTTACAACCTGAGGTCACTGTGGTGGTGACAG...TCTACAACCATCTAAGTACTTAGTTCTTAAAAGTCCATCAGACTCGTCAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACTGTGTATCTACATGCCATTTCCATCTTGTATCAGATGCTTCCATCCCTCTTGCATCTCCATCATaGCATTTGCAATTACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDCVSTCHFHLVSDASIPLASPS*HLQLHH Trigger: GTGATGTAATTGCAAATGCCATGATGGAGATGCAAG...AGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACACAGTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTGCAGGTACCAGGCACATGCATGGTCTACATTTATACATGAAGGTAAACTCCATCATGGCATTTaGAATTACATCACTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GFCRYQAHAWSTFIHEGKLHHGI*NYITEI Trigger: TATTTCAGTGATGTAATTGCAAATGCCATGATGGAG...TTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | GAAAATGGGCCCAGAAGACATTACATAATACAACACTaGGAATGGCTACAAGAGTTCCTAAAAGTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: ENGPRRHYIIQH*EWLQEFLKVDI Trigger: AATGTCAACTTTTAGGAACTCTTGTAGCCATTCCAAGTGTTGTATTATGTAATGTCTTCTGGGCCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| 3UTR CAA 72 bp | ATGTGCGTGCACATGATGCTAGGTGAGAATTCACTTTaGCTTATAATAGTTTTTCACTTTAATCATATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MCVHMMLGENSL*LIIVFHFNHMA Trigger: TGCCATATGATTAAAGTGAAAAACTATTATAAGCAAAAGTGAATTCTCACCTAGCATCATGTGCACGCACAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS GCA 90 bp | CCTTCCGGACCACTGACCCTCGCCACCAGGCCTGGAGCTTCACGATaGTCCTCAGCTCCAGGTCATCCTGCTCCAGCTTCTTCCGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSGPLTLATRPGASR*SSAPGHPAPASSGS Trigger: AGACCCGGAAGAAGCTGGAGCAGGATGACCTGGAGCTGAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGGTCCGGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CCA 90 bp | AAATTGCCAATTTCCTTCCGGACCACTGACCCTCGCCACCAGGCCTaGAGCTTCACGATGCTCCTCAGCTCCAGGTCATCCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KLPISFRTTDPRHQA*SFTMLLSSRSSCSS Trigger: GCTGGAGCAGGATGACCTGGAGCTGAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | CAGTGGAGACCACTGTTTGAAGGCACACAGTTCTGTGGTTTGAGGGCACCACCCACCAGGTCACTGGCCTaGGCAGCCTTGAGAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QWRPLFEGTQFCGLRAPPTRSLA*AALRAF Trigger: AAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGT...GGGTGGTGCCCTCAAACCACAGAACTGTGTGCCTTCAAACAGTGGTCTCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS GCA 90 bp | TATCCGGTCCTCAATAATGACCTGCTCGTACTCCCGGATCATCTTTaGCAGGTCTTGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPVLNNDLLVLPDHL*QVLQVYQVTGLGSL Trigger: AAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCGGGAGTACGAGCAGGTCATTATTGAGGACCGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 90 bp | ATCTTTCTTGGGCATTTTGAAATTGCCAATTTCCTTCCGGACCACTaGCCCTCGCCACCAGGCCTGGAGCTTCACGATGCTCCTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLGHFEIANFLPDH*PSPPGLELHDAPQL Trigger: GAGCTGAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS GCA 90 bp | TCAATAATGACCTGCTCGTACTCCCGGATCATCTTTGCCAGGTCTTaGAGGTGTACCAGGTCACTGGCCTTGGCAGCCTTGAGAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SIMTCSYSRIIFARS*RCTRSLALAALRAF Trigger: AAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCGGGAGTACGAGCAGGTCATTATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | CGCTGCATAAACCAGGTATGGTCACTCGCCCCTGTAGTTCTAGCACTTAGGAGGTCCTGCCCTCTCTGTTaGTTTTCTGCCATCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RCINQVWSLAPVVLALRRSCPLC*FSAIMD Trigger: ATCCATGATGGCAGAAAACAAACAGAGAGGGCAGGA...CCTCCTAAGTGCTAGAACTACAGGGGCGAGTGACCATACCTGGTTTATGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | AGAACCCGTGCCCCATTCTTTACCCCTGGAGGACTGTGTATCTACATGCCATTTACTCCCGGATCATCTTaGCCAGGTCTTGCAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTRAPFFTPGGLCIYMPFTPGSS*PGLAGV Trigger: TACACCTGCAAGACCTGGCAAAGATGATCCGGGAGT...AAATGGCATGTAGATACACAGTCCTCCAGGGGTAAAGAATGGGGCACGGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTCAGCACACAGCAGGTCAGTGCTTCTGTTGGGCCCTGTGGCTTCTTTTGGGCATTTTGAAATaGCCAATTTCCTTCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SVSQHTAGQCFCWALWLLLGILK*PISFRT Trigger: GGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAA...AAGAAGCCACAGGGCCCAACAGAAGCACTGACCTGCTGTGTGCTGACTCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS TCA 90 bp | TTGCCAGGTCTTGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTTaGGAGCATTTAACTCGTTCTGCTTTGCTTCTGTGTCTTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPGLAGVPGHWPWQP*EHLTRSALLLCLCQ Trigger: TTGACAAAGACACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTCACCCTGCTGTTTCCTGAACAGACACACTCCACACACAGTTGTAAGCGAAAGAGCCAGAATCTaGCATCTCCATCATGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PCSPCCFLNRHTPHTVVSERARI*HLHHGI Trigger: AATGCCATGATGGAGATGCAAGATTCTGGCTCTTTC...GCTTACAACTGTGTGTGGAGTGTGTCTGTTCAGGAAACAGCAGGGTGAGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS TCA 90 bp | TGCCTTTCGAGTCTTTGCTGTCATCTTTATCTTTCTTGGGCATTTTaGAATTGCCAATTTCCTTCCGGACCACTGACCCTCGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSSLCCHLYLSWAF*NCQFPSGPLTLATR Trigger: CCTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAAAGACTCGAAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCACATCTTTGCCAGGTCTaGCAGGTGTACCAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LERCHFYSSFKACNSSQAHLCQV*QVYQVT Trigger: AGTGACCTGGTACACCTGCAAGACCTGGCAAAGATG...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | GTGTTTTATGTGCTGTCCCCCAACACCACCAACCCTAGACTAATGGTCGCCCTGTCTTTCTTGGGCATTTaGAAATTGCCAATTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFYVLSPNTTNPRLMVALSFLGI*KLPISF Trigger: GAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGA...CAGGGCGACCATTAGTCTAGGGTTGGTGGTGTTGGGGGACAGCACATAAAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS TCA 90 bp | GATTCTCCAAGTTGGTTTTCGCCTTCATCTCTTGTAGCTGGTCCCTaGGGTGAGCAATGTATTCATTCCCGTTCTGTACTTGCATTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DSPSWFSPSSLVAGP*GEQCIHSRSVLAFD Trigger: GTCAAATGCAAGTACAGAACGGGAATGAATACATTGCTCACCTCAGGGACCAGCTACAAGAGATGAAGGCGAAAACCAACTTGGAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGTCTACAGCTCAATGGTTTCCACAACTGGACTTCATTCTCTGGAGCATTTTTGCTGTCTCTTTCTTaGCCCAAGGCTTTCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCLQLNGFHNWTSFSGAFLLSLS*PKAFRR Trigger: TCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAA...AAATGCTCCAGAGAATGAAGTCCAGTTGTGGAAACCATTGAGCTGTAGACACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 90 bp | TCATTTTGCTGTCTCTTTCTTTGCCCAAGGCTTTCAGGAGACTGGTaGAAGAGCCAGAATCTTGCATCTCCATCATGGCATTTGCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: SFCCLFLCPRLSGDW*KSQNLASPSWHLQL Trigger: TAATTGCAAATGCCATGATGGAGATGCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTCATAGGGAGCAGGCTCGCTTTCCATGCCAGAGCCAGTATTTTCATAGTTTTGCCTTTCGAGTCTTaGCTGTCATCTTTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFIGSRLAFHARASIFIVLPFES*LSSLSF Trigger: GAAAGATAAAGATGACAGCAAAGACTCGAAAGGCAA...AACTATGAAAATACTGGCTCTGGCATGGAAAGCGAGCCTGCTCCCTATGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTGCAGGTACCAGGCACATGCATGGTCTACATTTATACATGAAGGTAAATTTGCTTCTGTGTCTTaGTCAAATTTCTCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFCRYQAHAWSTFIHEGKFASVS*SNFSIQ Trigger: CTGGATGGAGAAATTTGACAAAGACACAGAAGCAAA...TTTACCTTCATGTATAAATGTAGACCATGCATGTGCCTGGTACCTGCAGAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | TTCACTTTAATCATATGGCATAAAGTCAGAGTCAGATGTGTCAGGAGTTTTTACCTGGCCTTGGCAGCCTaGAGAGCATTTAACTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLIIWHKVRVRCVRSFYLALAA*RAFNSF Trigger: GAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAG...GTAAAAACTCCTGACACATCTGACTCTGACTTTATGCCATATGATTAAAGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS-3UTR CAA 90 bp | TTAGAACGCTGCCACTTTTATTCAAGTTTCAAAGCATGTAACAGCAGCCAGGCATCATGGAAATTCATTTaGCTGTCTCTTTCTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LERCHFYSSFKACNSSQASWKFI*LSLSLP Trigger: GGGCAAAGAAAGAGACAGCAAAATGAATTTCCATGA...TGCCTGGCTGCTGTTACATGCTTTGAAACTTGAATAAAAGTGGCAGCGTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS-3UTR CAA 90 bp | TGTATCTACATGCCATTTCCATCTTGTATCAGATGCTTCCATCCCTATCTGTCCTTAACTCGTTCTGCTTaGCTTCTGTGTCTTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CIYMPFPSCIRCFHPYLSLTRSA*LLCLCQ Trigger: TTGACAAAGACACAGAAGCAAAGCAGAACGAGTTAA...GGACAGATAGGGATGGAAGCATCTGATACAAGATGGAAATGGCATGTAGATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS GCA 90 bp | GAGACTGGTGAAAGAGCCAGAATCTTGCATCTCCATCATGGCATTTaGAATTACATCACTGAAATATTGCCTGTCATTCTGAATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETGERARILHLHHGI*NYITEILPVILNFL Trigger: AAGAAAATTCAGAATGACAGGCAATATTTCAGTGATGTAATTGCAAATGCCATGATGGAGATGCAAGATTCTGGCTCTTTCACCAGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 90 bp | ATCATGGCATTTGCAATTACATCACTGAAATATTGCCTGTCATTCTaGATTTTCTTCAGTGTCTCCAGAGTCATCATGGTCTGCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IMAFAITSLKYCLSF*IFFSVSRVIMVCFV Trigger: TACAAAGCAGACCATGATGACTCTGGAGACACTGAAGAAAATTCAGAATGACAGGCAATATTTCAGTGATGTAATTGCAAATGCCATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS GCA 72 bp | CCACTGACCCTCGCCACCAGGCCTGGAGCTTCACGATaGTCCTCAGCTCCAGGTCATCCTGCTCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTLATRPGASR*SSAPGHPAPAS Trigger: AGAAGCTGGAGCAGGATGACCTGGAGCTGAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CCA 72 bp | ATTTCCTTCCGGACCACTGACCCTCGCCACCAGGCCTaGAGCTTCACGATGCTCCTCAGCTCCAGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: ISFRTTDPRHQA*SFTMLLSSRSS Trigger: GGATGACCTGGAGCTGAGGAGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS GCA 72 bp | ACCTGCTCGTACTCCCGGATCATCTTTGCCAGGTCTTaGAGGTGTACCAGGTCACTGGCCTTGGCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TCSYSRIIFARS*RCTRSLALAAL Trigger: CAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCGGGAGTACGAGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | GACCTGCTCGTACTCCCGGATCATCTTTGCCAGGTCTaGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLLVLPDHLCQV*QVYQVTGLGSL Trigger: AAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCGGGAGTACGAGCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | GGGCATTTTGAAATTGCCAATTTCCTTCCGGACCACTaGCCCTCGCCACCAGGCCTGGAGCTTCACGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GHFEIANFLPDH*PSPPGLELHDA Trigger: AGCATCGTGAAGCTCCAGGCCTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 90 bp | CTCAATAATGACCTGCTCGTACTCCCGGATCATCTTTGCCAGGTCTaGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTTGAGAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LNNDLLVLPDHLCQV*QVYQVTGLGSLESI Trigger: AATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCGGGAGTACGAGCAGGTCATTATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | ACACCCTCAGCACGTCTAGAAGGGACAGCGTCTCTATaGCTTCCGGGGAGGTCTCTTCCTCTTCTTCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: TPSARLEGTASL*LPGRSLPLLRN Trigger: ATTACGAAGAAGAGGAAGAGACCTCCCCGGAAGTCATAGAGACGCTGTCCCTTCTAGACGTGCTGAGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 90 bp | CGGATCATCTTTGCCAGGTCTTGCAGGTGTACCAGGTCACTGGCCTaGGCAGCCTTGAGAGCATTTAACTCGTTCTGCTTTGCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RIIFARSCRCTRSLA*AALRAFNSFCFASV Trigger: CACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAAGATGATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | CTTGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTTaGGAGCATTTAACTCGTTCTGCTTTGCTTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAGVPGHWPWQP*EHLTRSALLLC Trigger: ACACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | TCTTGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTaGAGAGCATTTAACTCGTTCTGCTTTGCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCRCTRSLALAA*RAFNSFCFASV Trigger: CACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | TTTGCCAGGTCTTGCAGGTGTACCAGGTCACTGGCCTaGGCAGCCTTGAGAGCATTTAACTCGTTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FARSCRCTRSLA*AALRAFNSFCF Trigger: AAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 90 bp | TTTGCCAGGTCTTGCAGGTGTACCAGGTCACTGGCCTTGGCAGCCTaGAGAGCATTTAACTCGTTCTGCTTTGCTTCTGTGTCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FARSCRCTRSLALAA*RAFNSFCFASVSLS Trigger: TGACAAAGACACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGCCAAGGCCAGTGACCTGGTACACCTGCAAGACCTGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CCA 72 bp | TTTTTCGGTGTGGTTGTAATCATAGATGCTCCTTCGTaGCTGGCTTTCTGGGTGAGGCTCTGCCTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFGVVVIIDAPS*LAFWVRLCLLS Trigger: TGAAAGAAGGCAGAGCCTCACCCAGAAAGCCAGCCACGAAGGAGCATCTATGATTACAACCACACCGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 90 bp | TTGCCTTTCGAGTCTTTGCTGTCATCTTTATCTTTCTTGGGCATTTaGAAATTGCCAATTTCCTTCCGGACCACTGACCCTCGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPFESLLSSLSFLGI*KLPISFRTTDPRHQ Trigger: CTGGTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAAAGACTCGAAAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | TGTCTCTTTCTTTGCCCAAGGCTTTCAGGAGACTGGTaGAAGAGCCAGAATCTTGCATCTCCATCATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CLFLCPRLSGDW*KSQNLASPSWH Trigger: ATGCCATGATGGAGATGCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | GTTTTCGCCTTCATCTCTTGTAGCTGGTCCCTGAGGTaGGCAATGTATTCATTCCCGTTCTGTACTTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VFAFISCSWSLR*AMYSFPFCTCI Trigger: AATGCAAGTACAGAACGGGAATGAATACATTGCTCACCTCAGGGACCAGCTACAAGAGATGAAGGCGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS TCA 72 bp | AGTTGGTTTTCGCCTTCATCTCTTGTAGCTGGTCCCTaGGGTGAGCAATGTATTCATTCCCGTTCTGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: SWFSPSSLVAGP*GEQCIHSRSVL Trigger: AAGTACAGAACGGGAATGAATACATTGCTCACCTCAGGGACCAGCTACAAGAGATGAAGGCGAAAACCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CCA 72 bp | TCCAGCAAGAGTTCTTCTGCTCGGTTACATTTCTTCTaGGTCTGGGAAATCTGCAGCTCAGCATTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSKSSSARLHFF*VWEICSSAFLF Trigger: GAAAAGAAATGCTGAGCTGCAGATTTCCCAGACCCAGAAGAAATGTAACCGAGCAGAAGAACTCTTGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | TTGCTGTCATCTTTATCTTTCTTGGGCATTTTGAAATaGCCAATTTCCTTCCGGACCACTGACCCTCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSLSFLGILK*PISFRTTDPRH Trigger: GTGGCGAGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 90 bp | TCCCTTGTGATGACATCATGGAAATTCATTTTGCTGTCTCTTTCTTaGCCCAAGGCTTTCAGGAGACTGGTGAAAGAGCCAGAATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLVMTSWKFILLSLS*PKAFRRLVKEPESC Trigger: GCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAAAATGAATTTCCATGATGTCATCACAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 90 bp | TCCTTCTCCTTGCCTTTCGAGTCTTTGCTGTCATCTTTATCTTTCTaGGGCATTTTGAAATTGCCAATTTCCTTCCGGACCACTGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFSLPFESLLSSLSF*GILKLPISFRTTDP Trigger: AGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAAAGACTCGAAAGGCAAGGAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS GCA 72 bp | AAGGCTTTCAGGAGACTGGTGAAAGAGCCAGAATCTTaGATCTCCATCATGGCATTTGCAATTACATCACTG | + |
|
Preference number: 6 (lower is better) Translates to: KAFRRLVKEPES*ISIMAFAITSL Trigger: CAGTGATGTAATTGCAAATGCCATGATGGAGATGCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 72 bp | CAAGGCTTTCAGGAGACTGGTGAAAGAGCCAGAATCTaGCATCTCCATCATGGCATTTGCAATTACATCACT | + |
|
Preference number: 6 (lower is better) Translates to: QGFQETGERARI*HLHHGICNYIT Trigger: AGTGATGTAATTGCAAATGCCATGATGGAGATGCAAGATTCTGGCTCTTTCACCAGTCTCCTGAAAGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 90 bp | GCAGCCTTGAGAGCATTTAACTCGTTCTGCTTTGCTTCTGTGTCTTaGTCAAATTTCTCCATCCAGAACTCTAGCTTCTCCTCAAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AALRAFNSFCFASVS*SNFSIQNSSFSSSF Trigger: GAAACTTGAGGAGAAGCTAGAGTTCTGGATGGAGAAATTTGACAAAGACACAGAAGCAAAGCAGAACGAGTTAAATGCTCTCAAGGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 72 bp | ATGACATCATGGAAATTCATTTTGCTGTCTCTTTCTTaGCCCAAGGCTTTCAGGAGACTGGTGAAAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MTSWKFILLSLS*PKAFRRLVKEP Trigger: TGGCTCTTTCACCAGTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAAAATGAATTTCCATGATGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
||
| CDS CAA 72 bp | GAGTCTTTGCTGTCATCTTTATCTTTCTTGGGCATTTaGAAATTGCCAATTTCCTTCCGGACCACTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: ESLLSSLSFLGI*KLPISFRTTDP Trigger: AGGGTCAGTGGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAAAGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 90 bp | TTTCTTCCCTTTTCCTCCCTTGTGATGACATCATGGAAATTCATTTaGCTGTCTCTTTCTTTGCCCAAGGCTTTCAGGAGACTGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FLPFSSLVMTSWKFI*LSLSLPKAFRRLVK Trigger: TTTCACCAGTCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAAAATGAATTTCCATGATGTCATCACAAGGGAGGAAAAGGGAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | TTTTCCTCCCTTGTGATGACATCATGGAAATTCATTTaGCTGTCTCTTTCTTTGCCCAAGGCTTTCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FSSLVMTSWKFI*LSLSLPKAFRR Trigger: TCTCCTGAAAGCCTTGGGCAAAGAAAGAGACAGCAAAATGAATTTCCATGATGTCATCACAAGGGAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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| CDS CAA 72 bp | TTGCCTTTCGAGTCTTTGCTGTCATCTTTATCTTTCTaGGGCATTTTGAAATTGCCAATTTCCTTCCGGACC | + |
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Preference number: 6 (lower is better) Translates to: LPFESLLSSLSF*GILKLPISFRT Trigger: GGTCCGGAAGGAAATTGGCAATTTCAAAATGCCCAAGAAAGATAAAGATGACAGCAAAGACTCGAAAGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115100.9 |
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