Pregenerated sensors for IQCF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091129Ensembl transcript IDs: ENSMUST00000171091.4, ENSMUST00000238329.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGGCTGCTTGGCGTGCCTaGAGGAATCGTCTGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQAAWRA*RNRLRA Trigger: GGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGC...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR TCA 90 bp | TCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACCAGCCGGCTGGCTTTaGCCTCATAGCGGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SVSLFIGKEIQPPLALPAPAGWL*PHSGCG Trigger: TCCACAGCCGCTATGAGGTCAAAGCCAGCCGGCTGG...TGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | TCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACCTGGAGGAATCGTCTaGGGGCCTGCCACATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: SVSLFIGKEIQPPLALPAPGGIV*GPATCG Trigger: TCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGG...TGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACTCCACCAGCACTGGATaGCCCATGCTCCAAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHSTSTG*PMLQVL Trigger: CAGCACTTGGAGCATGGGCCATCCAGTGCTGGTGGA...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACGACCTCCACCAGCACTaGATGGCCCATGCTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHDLHQH*MAHAPS Trigger: ACTTGGAGCATGGGCCATCCAGTGCTGGTGGAGGTC...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR TCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGGCATGCCAGCGCCAGTaGGTCTGGATAATGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQACQRQ*VWIMQA Trigger: AGCCTGCATTATCCAGACTCACTGGCGCTGGCATGC...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACCTGCACCTTCACCACTaGCCATTCCTGGCAGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHLHLHH*PFLAGV Trigger: TACACCTGCCAGGAATGGGCAGTGGTGAAGGTGCAG...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | TCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCAAATCGTCTGCGGGCCTaGCACATGCGGACATATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLFIGKEIQPPLALPANRLRA*HMRTYA Trigger: GGCATATGTCCGCATGTGGCAGGCCCGCAGACGATT...TGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACCTGGATAATGCAGGCTaGTTGGCGTGCCTGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHLDNAG*LACLEE Trigger: TTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAG...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | TCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACCACATGCGGACATATaGCTGCACCTTCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLFIGKEIQPPLALPAPHADI*LHLHHC Trigger: GCAGTGGTGAAGGTGCAGGCATATGTCCGCATGTGG...TGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACATAATGCAGGCTGCTTaGCGTGCCTGGAGGAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHIMQAA*RAWRNR Trigger: ACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTAT...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR TCA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACGTTGCCACGCCACCATaGCTGTATCTTTATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHVATPP*LYLYGC Trigger: ACAGCCATAAAGATACAGTCATGGTGGCGTGGCAAC...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | TGTGATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCTTCGGCGGACCATGTTaGCACGCCACCATGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CDQLVSLLGRRSSLPWLCFGGPC*HATMTV Trigger: TACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAA...GCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR GCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGATGCGGACATATGCCTaGACCTTCACCACTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQMRTYA*TFTTAH Trigger: ATGGGCAGTGGTGAAGGTGCAGGCATATGTCCGCAT...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGATCATACCTTGGCTTTaGCTAGCATGCCAGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQIIPWL*LACQRQ Trigger: CTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGAT...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR TCA 90 bp | TGTGATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCTATCTTGGTTTGCACTaGCCTCCACCAGCACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CDQLVSLLGRRSSLPWLCYLGLH*PPPALD Trigger: ATCCAGTGCTGGTGGAGGTCAGTGCAAACCAAGATA...GCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR TCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGTGGGCAGGTCTCTTTTaGAAGGTCTGTATTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQWAGLF*KVCIHS Trigger: ACTGTGAATACAGACCTTTCAAAAGAGACCTGCCCA...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CCA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGATGACTGTATCTTTATaGCTGTCTTCTCTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQMTVSL*LSSLTS Trigger: TGAAGTTAGAGAAGACAGCCATAAAGATACAGTCAT...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS GCA 90 bp | AGGCTGCTTGGCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCACATaGGGACATATGCCTGCACCTTCACCACTGCCCATTCCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLGVPGGIVCGPAT*GHMPAPSPLPIPGR Trigger: CCTGCCAGGAATGGGCAGTGGTGAAGGTGCAGGCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 90 bp | GCTTTGGCTAGCATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTaGTTGGCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCACATGCG | + |
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Preference number: 5 (lower is better) Translates to: ALASMPAPVSLDNAG*LACLEESSAGLPHA Trigger: CGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 90 bp | AGCATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTGCTTGGCGTaGCTGGAGGAATCGTCTGCGGGCCTGCCACATGCGGACATATGC | + |
|
Preference number: 5 (lower is better) Translates to: SMPAPVSLDNAGCLA*LEESSAGLPHADIC Trigger: GCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 90 bp | GCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCACATGCGGACATATaGCTGCACCTTCACCACTGCCCATTCCTGGCAGGTGTAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: ACLEESSAGLPHADI*LHLHHCPFLAGVEF Trigger: AAACTCTACACCTGCCAGGAATGGGCAGTGGTGAAGGTGCAGGCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 90 bp | ATAATGCAGGCTGCTTGGCGTGCCTGGAGGAATCGTCTGCGGGCCTaGCACATGCGGACATATGCCTGCACCTTCACCACTGCCCATTCC | + |
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Preference number: 5 (lower is better) Translates to: IMQAAWRAWRNRLRA*HMRTYACTFTTAHS Trigger: GGAATGGGCAGTGGTGAAGGTGCAGGCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS TCA 90 bp | CGGCTGTGGATCATACCTTGGCTTTGGCTAGCATGCCAGCGCCAGTaGGTCTGGATAATGCAGGCTGCTTGGCGTGCCTGGAGGAATCGT | + |
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Preference number: 5 (lower is better) Translates to: RLWIIPWLWLACQRQ*VWIMQAAWRAWRNR Trigger: ACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS-3UTR CAA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGGTTCGGCGGACCATGTaGCCACGCCACCATGACTGT | + |
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Preference number: 5 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQVRRTM*PRHHDC Trigger: ACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAAC...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CAA 90 bp | CAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCACGATAATGCAGGCTGCTaGGCGTGCCTGGAGGAATCG | + |
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Preference number: 5 (lower is better) Translates to: QLVSLLGRRSSLPWLCQHDNAGC*ACLEES Trigger: CGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATC...GTGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CAA 90 bp | TCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCAGATCATACCTTGGCTTaGGCTAGCATGCCAGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SVSLFIGKEIQPPLALPADHTLA*ASMPAP Trigger: TGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATC...TGCTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS GCA 90 bp | CCCATGCTCCAAGTGCTGCATCCAGTAGTGTTCGGCGGACCATGTTaGCACGCCACCATGACTGTATCTTTATGGCTGTCTTCTCTAACT | + |
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Preference number: 5 (lower is better) Translates to: PMLQVLHPVVFGGPC*HATMTVSLWLSSLT Trigger: AGTTAGAGAAGACAGCCATAAAGATACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAACACTACTGGATGCAGCACTTGGAGCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CCA 90 bp | AGGTGTAGAGTTTTAGTGCCAAGCGCCGTTTTTGCTCCACTATCTTaGTTTGCACTGACCTCCACCAGCACTGGATGGCCCATGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RCRVLVPSAVFAPLS*FALTSTSTGWPMLQ Trigger: TTGGAGCATGGGCCATCCAGTGCTGGTGGAGGTCAGTGCAAACCAAGATAGTGGAGCAAAAACGGCGCTTGGCACTAAAACTCTACACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CCA 90 bp | GTGTTCGGCGGACCATGTTGCCACGCCACCATGACTGTATCTTTATaGCTGTCTTCTCTAACTTCACACTCTGCTCATTATCCACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VFGGPCCHATMTVSL*LSSLTSHSAHYPLG Trigger: GCCCAGTGGATAATGAGCAGAGTGTGAAGTTAGAGAAGACAGCCATAAAGATACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS-3UTR CAA 90 bp | TGTGATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCGCTGTGGATCATACCTaGGCTTTGGCTAGCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: CDQLVSLLGRRSSLPWLCAVDHT*ALASMP Trigger: TGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGC...GCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS-3UTR CAA 90 bp | GATCAGTTAGTCTCTTTATTGGGAAGGAGATCCAGCCTCCCCTGGCTTTGCCAGCTGGGCAGGTCTCTTTaGAAAGGTCTGTATTCACAG | + |
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Preference number: 5 (lower is better) Translates to: DQLVSLLGRRSSLPWLCQLGRSL*KGLYSQ Trigger: CTGTGAATACAGACCTTTCAAAAGAGACCTGCCCAG...CTGGCAAAGCCAGGGGAGGCTGGATCTCCTTCCCAATAAAGAGACTAACTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238329.2 |
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| CDS GCA 90 bp | CACCATGACTGTATCTTTATGGCTGTCTTCTCTAACTTCACACTCTaGTCATTATCCACTGGGCAGGTCTCTTTTGAAAGGTCTGTATTC | + |
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Preference number: 5 (lower is better) Translates to: HHDCIFMAVFSNFTL*SLSTGQVSFERSVF Trigger: GAATACAGACCTTTCAAAAGAGACCTGCCCAGTGGATAATGAGCAGAGTGTGAAGTTAGAGAAGACAGCCATAAAGATACAGTCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | GCGCCAGTGAGTCTGGATAATGCAGGCTGCTTGGCGTaGCTGGAGGAATCGTCTGCGGGCCTGCCACATGCG | + |
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Preference number: 6 (lower is better) Translates to: APVSLDNAGCLA*LEESSAGLPHA Trigger: CGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 90 bp | TTGGCTAGCATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTGCTaGGCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCACATGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LASMPAPVSLDNAGC*ACLEESSAGLPHAD Trigger: GTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | GGCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCACATaGGGACATATGCCTGCACCTTCACCACTGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: GVPGGIVCGPAT*GHMPAPSPLPI Trigger: AATGGGCAGTGGTGAAGGTGCAGGCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | GCTGCTTGGCGTGCCTGGAGGAATCGTCTGCGGGCCTaGCACATGCGGACATATGCCTGCACCTTCACCACT | + |
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Preference number: 6 (lower is better) Translates to: AAWRAWRNRLRA*HMRTYACTFTT Trigger: AGTGGTGAAGGTGCAGGCATATGTCCGCATGTGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | AGCATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTaGTTGGCGTGCCTGGAGGAATCGTCTGCGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SMPAPVSLDNAG*LACLEESSAGL Trigger: CAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 72 bp | ATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTGCTaGGCGTGCCTGGAGGAATCGTCTGCGGGCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: MPAPVSLDNAGC*ACLEESSAGLP Trigger: TGGCAGGCCCGCAGACGATTCCTCCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 90 bp | CCGGCTGGCTTTGACCTCATAGCGGCTGTGGATCATACCTTGGCTTaGGCTAGCATGCCAGCGCCAGTGAGTCTGGATAATGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PAGFDLIAAVDHTLA*ASMPAPVSLDNAGC Trigger: GCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGCCGCTATGAGGTCAAAGCCAGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 90 bp | CTCCAGCCGGCTGGCTTTGACCTCATAGCGGCTGTGGATCATACCTaGGCTTTGGCTAGCATGCCAGCGCCAGTGAGTCTGGATAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LQPAGFDLIAAVDHT*ALASMPAPVSLDNA Trigger: TGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGCCGCTATGAGGTCAAAGCCAGCCGGCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS TCA 72 bp | ATCATACCTTGGCTTTGGCTAGCATGCCAGCGCCAGTaGGTCTGGATAATGCAGGCTGCTTGGCGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IIPWLWLACQRQ*VWIMQAAWRAW Trigger: CCAGGCACGCCAAGCAGCCTGCATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 72 bp | GCTGGCTTTGACCTCATAGCGGCTGTGGATCATACCTaGGCTTTGGCTAGCATGCCAGCGCCAGTGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGFDLIAAVDHT*ALASMPAPVSL Trigger: CAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGCCGCTATGAGGTCAAAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS TCA 72 bp | CAAGCGCCGTTTTTGCTCCACTATCTTGGTTTGCACTaGCCTCCACCAGCACTGGATGGCCCATGCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: QAPFLLHYLGLH*PPPALDGPCSK Trigger: CTTGGAGCATGGGCCATCCAGTGCTGGTGGAGGTCAGTGCAAACCAAGATAGTGGAGCAAAAACGGCGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 90 bp | GCCCATGCTCCAAGTGCTGCATCCAGTAGTGTTCGGCGGACCATGTaGCCACGCCACCATGACTGTATCTTTATGGCTGTCTTCTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: AHAPSAASSSVRRTM*PRHHDCIFMAVFSN Trigger: GTTAGAGAAGACAGCCATAAAGATACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAACACTACTGGATGCAGCACTTGGAGCATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS TCA 72 bp | CAAGGATTTCGATGTCAAGCTCCAGCCGGCTGGCTTTaGCCTCATAGCGGCTGTGGATCATACCTTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QGFRCQAPAGWL*PHSGCGSYLGF Trigger: AAAGCCAAGGTATGATCCACAGCCGCTATGAGGTCAAAGCCAGCCGGCTGGAGCTTGACATCGAAATCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | CAAGTGCTGCATCCAGTAGTGTTCGGCGGACCATGTTaGCACGCCACCATGACTGTATCTTTATGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: QVLHPVVFGGPC*HATMTVSLWLS Trigger: AGACAGCCATAAAGATACAGTCATGGTGGCGTGGCAACATGGTCCGCCGAACACTACTGGATGCAGCACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 72 bp | AGTTTTAGTGCCAAGCGCCGTTTTTGCTCCACTATCTaGGTTTGCACTGACCTCCACCAGCACTGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFSAKRRFCSTI*VCTDLHQHWMA Trigger: GGCCATCCAGTGCTGGTGGAGGTCAGTGCAAACCAAGATAGTGGAGCAAAAACGGCGCTTGGCACTAAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 72 bp | TTTGACCTCATAGCGGCTGTGGATCATACCTTGGCTTaGGCTAGCATGCCAGCGCCAGTGAGTCTGGATAAT | + |
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Preference number: 6 (lower is better) Translates to: FDLIAAVDHTLA*ASMPAPVSLDN Trigger: ATTATCCAGACTCACTGGCGCTGGCATGCTAGCCAAAGCCAAGGTATGATCCACAGCCGCTATGAGGTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CCA 72 bp | GGACCATGTTGCCACGCCACCATGACTGTATCTTTATaGCTGTCTTCTCTAACTTCACACTCTGCTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: GPCCHATMTVSL*LSSLTSHSAHY Trigger: ATAATGAGCAGAGTGTGAAGTTAGAGAAGACAGCCATAAAGATACAGTCATGGTGGCGTGGCAACATGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS GCA 72 bp | TGTATCTTTATGGCTGTCTTCTCTAACTTCACACTCTaGTCATTATCCACTGGGCAGGTCTCTTTTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: CIFMAVFSNFTL*SLSTGQVSFER Trigger: CCTTTCAAAAGAGACCTGCCCAGTGGATAATGAGCAGAGTGTGAAGTTAGAGAAGACAGCCATAAAGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171091.4 ENSMUST00000238329.2 |
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| CDS CAA 72 bp | TCACACTCTGCTCATTATCCACTGGGCAGGTCTCTTTaGAAAGGTCTGTATTCACAGTTTTTATGTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: SHSAHYPLGRSL*KGLYSQFLCPW Trigger: CCATGGACATAAAAACTGTGAATACAGACCTTTCAAAAGAGACCTGCCCAGTGGATAATGAGCAGAGTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171091.4 |
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