Pregenerated sensors for IQCE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036555Ensembl transcript IDs: ENSMUST00000041783.14, ENSMUST00000077890.12, ENSMUST00000129704.2, ENSMUST00000135028.5, ENSMUST00000142081.6
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGGGCTGCCTGCCTCCTGGCCCTGCTGCCTTGCCTTGTGTCTGGGTaGCCTGAGCCATCCTCGGGCTGCTTCTCATTAGTGGCTGGACCA | + |
Preference number: 1 (lower is better) Translates to: WAACLLALLPCLVSG*PEPSSGCFSLVAGP Trigger: TGGTCCAGCCACTAATGAGAAGCAGCCCGAGGATGGCTCAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCAGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | GATGCAGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTaGAGAGCACAGAACACAGGACGGACACCTGCCAAAGGCAGAGGC | + |
Preference number: 1 (lower is better) Translates to: DADSQGQSALAMARG*RAQNTGRTPAKGRG Trigger: GCCTCTGCCTTTGGCAGGTGTCCGTCCTGTGTTCTGTGCTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | TGCCTGCCTCCTGGCCCTGCTGCCTTGCCTTGTGTCTGGGTGACCTaGGCCATCCTCGGGCTGCTTCTCATTAGTGGCTGGACCACTCTG | + |
Preference number: 1 (lower is better) Translates to: CLPPGPAALPCVWVT*AILGLLLISGWTTL Trigger: CAGAGTGGTCCAGCCACTAATGAGAAGCAGCCCGAGGATGGCTCAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | CAGTGGCACATGGACACTCCTGGCCCCGGGAAAGGTACAGGCACATaGGGGCCACCTGTAGCCGCCGTCTTGTGTCTTAGTGGGTGGTGT | + |
Preference number: 1 (lower is better) Translates to: QWHMDTPGPGKGTGT*GPPVAAVLCLSGWC Trigger: ACACCACCCACTAAGACACAAGACGGCGGCTACAGGTGGCCCTCATGTGCCTGTACCTTTCCCGGGGCCAGGAGTGTCCATGTGCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | GAAGTTTGCTGCTTCTTAAGGCCCCACTGCCAGTCCACAGCTGGCTaGGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCAC | + |
Preference number: 1 (lower is better) Translates to: EVCCFLRPHCQSTAG*VQDQHTPRGLGPTH Trigger: GTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | CTTTCACTTTTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTaGGGCCTCGGTCAGCAGACTGACAGCCACCCATCGGGCGGGGTC | + |
Preference number: 1 (lower is better) Translates to: LSLFQLCAQVSYSSE*GLGQQTDSHPSGGV Trigger: GACCCCGCCCGATGGGTGGCTGTCAGTCTGCTGACCGAGGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | GGCAATGGCGCGTGGGTGGAGAGCACAGAACACAGGACGGACACCTaGCAAAGGCAGAGGCTTCAGGCTTCACCCTCATTTACTGGGGCA | + |
Preference number: 1 (lower is better) Translates to: GNGAWVESTEHRTDT*QRQRLQASPSFTGA Trigger: TGCCCCAGTAAATGAGGGTGAAGCCTGAAGCCTCTGCCTTTGGCAGGTGTCCGTCCTGTGTTCTGTGCTCTCCACCCACGCGCCATTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | ACAAGGGACCAACACCTCAAGCTGCCAGATGCTGAGGGTGCCAGATaGCACCGGTCACCTGCAGGTACCTCTGCACACCCAGTTACAGGG | + |
Preference number: 1 (lower is better) Translates to: TRDQHLKLPDAEGAR*HRSPAGTSAHPVTG Trigger: CCCTGTAACTGGGTGTGCAGAGGTACCTGCAGGTGACCGGTGCCATCTGGCACCCTCAGCATCTGGCAGCTTGAGGTGTTGGTCCCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | CAGTTAAATAAGGGAGGGGACAGAGCAGTGGCACATGGACACTCCTaGCCCCGGGAAAGGTACAGGCACATGAGGGCCACCTGTAGCCGC | + |
Preference number: 1 (lower is better) Translates to: QLNKGGDRAVAHGHS*PRERYRHMRATCSR Trigger: GCGGCTACAGGTGGCCCTCATGTGCCTGTACCTTTCCCGGGGCCAGGAGTGTCCATGTGCCACTGCTCTGTCCCCTCCCTTATTTAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | GGAATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTaGCTGCCTCCTGGCCCTGCTGCCTTGCCTTGTGTCTGGGTGACC | + |
Preference number: 1 (lower is better) Translates to: GICPSLRHISSGTMG*LPPGPAALPCVWVT Trigger: GGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | CTACTCACCCCCAGGGATGAAGTTTGCTGCTTCTTAAGGCCCCACTaGCAGTCCACAGCTGGCTGCGTCCAAGACCAGCACACTCCCAGA | + |
Preference number: 1 (lower is better) Translates to: LLTPRDEVCCFLRPH*QSTAGCVQDQHTPR Trigger: TCTGGGAGTGTGCTGGTCTTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | CCTGTGTTTCAGAGGCAGGTTCTTAGAAAACCCAAGTGCGGGGGCTaGTCAGACCTCATTGCCCACTGGCCAGGCTGGGTGCACAGGTTG | + |
Preference number: 1 (lower is better) Translates to: PVFQRQVLRKPKCGG*SDLIAHWPGWVHRL Trigger: CAACCTGTGCACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTTCTAAGAACCTGCCTCTGAAACACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | GGGCAGCATCTTCAAGGAGGATGGCTCCAGTCTGTTCCTGGCTTTTaGGGTCCCTGCTGGCTTCCTGTGCACTCTCCAGAGAGGCTCAGA | + |
Preference number: 1 (lower is better) Translates to: GQHLQGGWLQSVPGF*GPCWLPVHSPERLR Trigger: TCTGAGCCTCTCTGGAGAGTGCACAGGAAGCCAGCAGGGACCTCAAAAGCCAGGAACAGACTGGAGCCATCCTCCTTGAAGATGCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | CCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTaGAACAAGGGGAGCAGAGGGGAGCAGAGTTTCCCAGATCTTGCT | + |
Preference number: 1 (lower is better) Translates to: PPLCASSSAASGGWR*NKGSRGEQSFPDLA Trigger: AGCAAGATCTGGGAAACTCTGCTCCCCTCTGCTCCCCTTGTTTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | GCTAATTTCACAGACAAGGGACCAACACCTCAAGCTGCCAGATGCTaGGGGTGCCAGATGGCACCGGTCACCTGCAGGTACCTCTGCACA | + |
Preference number: 1 (lower is better) Translates to: ANFTDKGPTPQAARC*GCQMAPVTCRYLCT Trigger: TGTGCAGAGGTACCTGCAGGTGACCGGTGCCATCTGGCACCCTCAGCATCTGGCAGCTTGAGGTGTTGGTCCCTTGTCTGTGAAATTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | TCCTTACAAAGGTCTCCACTCCTACTCACCCCCAGGGATGAAGTTTaGTGCTTCTTAAGGCCCCACTGCCAGTCCACAGCTGGCTGCGTC | + |
Preference number: 1 (lower is better) Translates to: SLQRSPLLLTPRDEV*CFLRPHCQSTAGCV Trigger: GACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAGGAGTGGAGACCTTTGTAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | TTTGTATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTaGGTGGAGGTGAAACAAGGGGAGCAGAGGGGAGCAGAGTTTCCC | + |
Preference number: 1 (lower is better) Translates to: FVSASSLCFLLSCIW*VEVKQGEQRGAEFP Trigger: GGGAAACTCTGCTCCCCTCTGCTCCCCTTGTTTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGATACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | TACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTaGCGTTCAGGCCGGCAGGACTTCCAGTTCCCACATCGGCTCCTG | + |
Preference number: 1 (lower is better) Translates to: YTTKPSTRTLVLQIR*RSGRQDFQFPHRLL Trigger: CAGGAGCCGATGTGGGAACTGGAAGTCCTGCCGGCCTGAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | TTACAAAGGTCTCCACTCCTACTCACCCCCAGGGATGAAGTTTGCTaGTTCTTAAGGCCCCACTGCCAGTCCACAGCTGGCTGCGTCCAA | + |
Preference number: 1 (lower is better) Translates to: LQRSPLLLTPRDEVC*FLRPHCQSTAGCVQ Trigger: TTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAGGAGTGGAGACCTTTGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | GAAGGCTCACTCCTGCTCTTTAAGCACAAGGTGATGTGGAGCTGTTaGTGTGGAAATCAGGGCACAGTGACGTCACTGACCCAGCTCTGC | + |
Preference number: 1 (lower is better) Translates to: EGSLLLFKHKVMWSC*CGNQGTVTSLTQLC Trigger: GCAGAGCTGGGTCAGTGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTTAAAGAGCAGGAGTGAGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | AATCTCAGTTCTATGGGACCAGGAAGTTCCATCTCCAGTGACCTATaGAGACCACCAGCAGCCAGTCTAACAGGCACTCTGGAGGGGACA | + |
Preference number: 1 (lower is better) Translates to: NLSSMGPGSSISSDL*RPPAASLTGTLEGT Trigger: TGTCCCCTCCAGAGTGCCTGTTAGACTGGCTGCTGGTGGTCTCCATAGGTCACTGGAGATGGAACTTCCTGGTCCCATAGAACTGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | GCCTACACAGAAGGCTCACTCCTGCTCTTTAAGCACAAGGTGATGTaGAGCTGTTGCTGTGGAAATCAGGGCACAGTGACGTCACTGACC | + |
Preference number: 1 (lower is better) Translates to: AYTEGSLLLFKHKVM*SCCCGNQGTVTSLT Trigger: GGTCAGTGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTTAAAGAGCAGGAGTGAGCCTTCTGTGTAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 90 bp | GTTTTGCCAATGGCCCTGGCTGGCCAGTCAGGCTTGGAGAACTTGTaGCTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGAT | + |
Preference number: 1 (lower is better) Translates to: VLPMALAGQSGLENL*LHNQAKHKDSCLTD Trigger: ATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 90 bp | GTCCCCACTGGTCTACTCCAAGAAAGAACCTTATTAGGTTTTCCTTaGGACAAATCTCAGTTCTATGGGACCAGGAAGTTCCATCTCCAG | + |
Preference number: 1 (lower is better) Translates to: VPTGLLQERTLLGFP*DKSQFYGTRKFHLQ Trigger: CTGGAGATGGAACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAGGTTCTTTCTTGGAGTAGACCAGTGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 90 bp | AGAAAGAACCTTATTAGGTTTTCCTTGAGACAAATCTCAGTTCTATaGGACCAGGAAGTTCCATCTCCAGTGACCTATGGAGACCACCAG | + |
Preference number: 1 (lower is better) Translates to: RKNLIRFSLRQISVL*DQEVPSPVTYGDHQ Trigger: CTGGTGGTCTCCATAGGTCACTGGAGATGGAACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAGGTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTGGGCTGCCTGCCTCCTaGCCCTGCTGCCTTGCCTTG | + |
Preference number: 2 (lower is better) Translates to: KTQVRGLIRPHCPLARLGGLPAS*PCCLAL Trigger: CAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCAGCCC...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | CTGATGCAGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTGGAGAGCCTGGTGGAGAAAAATaGGAGGCAGCTGTCCCTGGT | + |
Preference number: 2 (lower is better) Translates to: LMQTARGSLLWQWRVGGEPGGEK*EAAVPG Trigger: ACCAGGGACAGCTGCCTCCCATTTTTCTCCACCAGG...CTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | AAACTACCTTGGCAGGCAGCCTCCAGGCCATGGCTGCGTTGTGTTTaGCCCCCTGGTGGAGAAAAATGGGAGGCAGCTGTCCCTGGTCCC | + |
Preference number: 2 (lower is better) Translates to: KLPWQAASRPWLRCV*PPGGEKWEAAVPGP Trigger: GGGACCAGGGACAGCTGCCTCCCATTTTTCTCCACCAGGGGGCAAAACACAACGCAGCCATGGCCTGGAGGCTGCCTGCCAAGGTAGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | ACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCAGGCCGGACTGGCCAGGCTGGGTaGACAGGTTGGCCCTGCAGC | + |
Preference number: 2 (lower is better) Translates to: TKPSTRTLVLQIRCRSGRTGQAG*TGWPCS Trigger: GCTGCAGGGCCAACCTGTGCACCCAGCCTGGCCAGT...CCGGCCTGAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTAGTGGGAAATGGAAGTaGGAGTTGCCCACCCTCCCC | + |
Preference number: 2 (lower is better) Translates to: KTQVRGLIRPHCPLARLGSGKWK*ELPTLP Trigger: GGGGAGGGTGGGCAACTCCCACTTCCATTTCCCACT...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | TGCGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCACAGCCTCTACTTGCTGGCTCTTCTATaGCTGCATCTTGCTGTGGGC | + |
Preference number: 2 (lower is better) Translates to: CVQDQHTPRGLGPTHSLYLLALL*LHLAVG Trigger: GCCCACAGCAAGATGCAGTCATAGAAGAGCCAGCAA...GTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGCCTCGGTCAGCAGACTaGCAGCCACCCATCGGGCGG | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQPRSAD*QPPIGR Trigger: CCGCCCGATGGGTGGCTGTCAGTCTGCTGACCGAGG...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | CCTGGAGAAGTCAGCGGGAGCTCACTGTACTGCCCCTGCACCCCAGATAGGCTAAAGTTCCATCTCCAGTaGCCTATGGAGACCACCAGC | + |
Preference number: 2 (lower is better) Translates to: PGEVSGSSLYCPCTPDRLKFHLQ*PMETTS Trigger: GCTGGTGGTCTCCATAGGTCACTGGAGATGGAACTT...TAGCCTATCTGGGGTGCAGGGGCAGTACAGTGAGCTCCCGCTGACTTCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | AAGCACAAGGTGATGTGGAGCTGTTGCTGTGGAAATCAGGGCACAGTGACGTCATGCCTTGTGTCTGGGTaGCCTGAGCCATCCTCGGGC | + |
Preference number: 2 (lower is better) Translates to: KHKVMWSCCCGNQGTVTSCLVSG*PEPSSG Trigger: GCCCGAGGATGGCTCAGGTCACCCAGACACAAGGCA...TGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | AAGCACAAGGTGATGTGGAGCTGTTGCTGTGGAAATCAGGGCACAGTGACGTCAGCCTCCTGGCCCTGCTaGCTTGCCTTGTGTCTGGGT | + |
Preference number: 2 (lower is better) Translates to: KHKVMWSCCCGNQGTVTSASWPC*LALCLG Trigger: ACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGC...TGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGGACCTCATTGCCCACTaGCCAGGCTGGGTGCACAGG | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQDLIAH*PGWVHR Trigger: CCTGTGCACCCAGCCTGGCCAGTGGGCAATGAGGTC...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | GGTTTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGATCTGGTGGGTGGAGGTaGAACAAGGGGAGCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: GLLPPTRSSLMSVLLVLGSGGWR*NKGSRG Trigger: CCCTCTGCTCCCCTTGTTTCACCTCCACCCACCAGA...TCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATTCTGGGACAATGGGCTaGCTGCCTCCTGGCCCTGCT | + |
Preference number: 2 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHSGTMG*LPPGPA Trigger: AGCAGGGCCAGGAGGCAGGCAGCCCATTGTCCCAGA...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTGTGCCAGGAACTAAATaGTCCCCAAAAGCAAACCTC | + |
Preference number: 2 (lower is better) Translates to: KTQVRGLIRPHCPLARLGVPGTK*SPKANL Trigger: GAGGTTTGCTTTTGGGGACCATTTAGTTCCTGGCAC...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCGCCCACTGGCCAGGCTaGGTGCACAGGTTGGCCCTG | + |
Preference number: 2 (lower is better) Translates to: TRSSLMSVLLVLGSLVCIAHWPG*VHRLAL Trigger: CAGGGCCAACCTGTGCACCCAGCCTGGCCAGTGGGC...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAAAAGGCTAGGCCAACATaGCAGCTAACAGTGCCATGT | + |
Preference number: 2 (lower is better) Translates to: ISLLSVLPPQLHLVGGGEKARPT*QLTVPC Trigger: ACATGGCACTGTTAGCTGTCATGTTGGCCTAGCCTT...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGAGCTACAGCAGTGAGTaGGGCCTCGGTCAGCAGACT | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQSYSSE*GLGQQT Trigger: AGTCTGCTGACCGAGGCCTCACTCACTGCTGTAGCT...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | TTTGCTCACTCGGAACACTCAATGCACAGATGGCTGCAGTTAAATAAGGGAGGGCCTGCCTCCTGGCCCTaGTGCCTTGCCTTGTGTCTG | + |
Preference number: 2 (lower is better) Translates to: FAHSEHSMHRWLQLNKGGPASWP*CLALCL Trigger: CAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGG...CCCTCCCTTATTTAACTGCAGCCATCTGTGCATTGAGTGTTCCGAGTGAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTTTTTGTAGAGAAGGGTaGCAGGAACTAAATGGTCCC | + |
Preference number: 2 (lower is better) Translates to: KTQVRGLIRPHCPLARLGFCREG*QELNGP Trigger: GGGACCATTTAGTTCCTGGCACCCTTCTCTACAAAA...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGTTCTTAAGGCCCCACTaGCAGTCCACAGCTGGCTGC | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQFLRPH*QSTAGC Trigger: GCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAA...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAATCACTTTTTCAGCTCTaGGCACAGGTCAGCTACAGC | + |
Preference number: 2 (lower is better) Translates to: ISLLSVLPPQLHLVGGGESLFQL*AQVSYS Trigger: GCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGA...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | GCCTTTCACTTTTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTGAGGCCTTCCTGGTCTCTAACTaGCAAGCCCAGCTCACTTCC | + |
Preference number: 2 (lower is better) Translates to: AFHFFSSAHRSATAVSEAFLVSN*QAQLTS Trigger: GGAAGTGAGCTGGGCTTGCCAGTTAGAGACCAGGAA...GGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCACTCCCAGAGGGCTTaGCCCAACCCACAGCCTCTA | + |
Preference number: 2 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHHSQRA*PNPQPL Trigger: TAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTG...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | GCCTTTCACTTTTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTGAGGCCACTCACCCCCAGGGATaGAGTTTGCTGCTTCTTAAG | + |
Preference number: 2 (lower is better) Translates to: AFHFFSSAHRSATAVSEATHPQG*SLLLLK Trigger: CTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGT...GGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCTCTCCTCTGGGACAATaGGCTGCCTGCCTCCTGGCC | + |
Preference number: 2 (lower is better) Translates to: TRSSLMSVLLVLGSLVCISPLGQ*AACLLA Trigger: GGCCAGGAGGCAGGCAGCCCATTGTCCCAGAGGAGA...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | TTGGTTCTGAATGCTGAGGTCAGAGGTCCTTACAAAGGTCTCCACTCCTACTCAGAGGGGACAGAGCAGTaGCACATGGACACTCCTGGC | + |
Preference number: 2 (lower is better) Translates to: LVLNAEVRGPYKGLHSYSEGTEQ*HMDTPG Trigger: GCCAGGAGTGTCCATGTGCCACTGCTCTGTCCCCTC...TGAGTAGGAGTGGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGCTCAGCTGCATCTGGTaGGTGGAGGTGAAACAAGGG | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQLSCIW*VEVKQG Trigger: CCCTTGTTTCACCTCCACCCACCAGATGCAGCTGAG...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATGGCCTACAGGGACTGTaGTCTTGGTGGCTTCAAGCC | + |
Preference number: 2 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHGLQGL*SWWLQA Trigger: GGCTTGAAGCCACCAAGACCACAGTCCCTGTAGGCC...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | TTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTaGGGAAGCCTGGTTTGTATCAGCCTCCTCTCTGTGCTTCCTCCT | + |
Preference number: 2 (lower is better) Translates to: LLPPTRSSLMSVLLV*GSLVCISLLSVLPP Trigger: AGGAGGAAGCACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCTGTGTCTGGGTGACCTaGGCCATCCTCGGGCTGCTT | + |
Preference number: 2 (lower is better) Translates to: TRSSLMSVLLVLGSLVCICVWVT*AILGLL Trigger: AAGCAGCCCGAGGATGGCTCAGGTCACCCAGACACA...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | AAGCACAAGGTGATGTGGAGCTGTTGCTGTGGAAATCAGGGCACAGTGACGTCAGGAACAAGGAGCCCATaGGACAAGGACTCAGTTAGG | + |
Preference number: 2 (lower is better) Translates to: KHKVMWSCCCGNQGTVTSGTRSP*DKDSVR Trigger: CCTAACTGAGTCCTTGTCCCATGGGCTCCTTGTTCC...TGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | GTAGACAAAGCTGGGCCCTCCCTCTTCCTGGTCTCTAACTGGCAAGCCCAGCTCAAGTTACATGGAGCCTaGATACTCCTAAAACCCTGT | + |
Preference number: 2 (lower is better) Translates to: VDKAGPSLFLVSNWQAQLKLHGA*ILLKPC Trigger: ACAGGGTTTTAGGAGTATCCAGGCTCCATGTAACTT...GAGCTGGGCTTGCCAGTTAGAGACCAGGAAGAGGGAGGGCCCAGCTTTGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | CTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCACTGAGAAACTACCTTaGCAGGCAGCCTCCAGGCCA | + |
Preference number: 2 (lower is better) Translates to: LHNQAKHKDSCLTDQVPFTEKLP*QAASRP Trigger: TGGCCTGGAGGCTGCCTGCCAAGGTAGTTTCTCAGT...GAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCGCCAATGGCCCTGGCTaGCCAGTCAGGCTTGGAGAA | + |
Preference number: 2 (lower is better) Translates to: TRSSLMSVLLVLGSLVCIANGPG*PVRLGE Trigger: TTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGC...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | TTTGTTTTGCCAATGGCCCTGGCTGGCCAGTCAGGCTTGGAGAACTaGTGCCTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACA | + |
Preference number: 2 (lower is better) Translates to: FVLPMALAGQSGLEN*CLHNQAKHKDSCLT Trigger: TGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGCAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | TCAGTAGTTTTTGTTTTGCCAATGGCCCTGGCTGGCCAGTCAGGCTaGGAGAACTTGTGCCTACACAACCAAGCCAAGCACAAGGACTCT | + |
Preference number: 2 (lower is better) Translates to: SVVFVLPMALAGQSG*ENLCLHNQAKHKDS Trigger: AGAGTCCTTGTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGCAAAACAAAAACTACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | ACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTaGTATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGT | + |
Preference number: 2 (lower is better) Translates to: TQLTDVCFASFGKPG*YQPPLCASSSAASG Trigger: ACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | TTGGTTCTGAATGCTGAGGTCAGAGGTCCTTACAAAGGTCTCCACTCCTACTCATTAGTGGGTGGTGTCTaGGGCTTTAAGGGGTGGCAG | + |
Preference number: 2 (lower is better) Translates to: LVLNAEVRGPYKGLHSYSLVGGV*GFKGWQ Trigger: CTGCCACCCCTTAAAGCCTCAGACACCACCCACTAA...TGAGTAGGAGTGGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | TCAGGCTTCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTTGCCTTTAATGGAGGCAGCTGTCCCTaGTCCCATCAGAGTATTAGG | + |
Preference number: 2 (lower is better) Translates to: SGFTLIYWGSFKTGFAFNGGSCP*SHQSIR Trigger: CCTAATACTCTGATGGGACCAGGGACAGCTGCCTCC...ATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGAAGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR GCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATGTGATGTGGAGCTGTTaGTGTGGAAATCAGGGCACA | + |
Preference number: 2 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHVMWSC*CGNQGT Trigger: TGTGCCCTGATTTCCACAGCAACAGCTCCACATCAC...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR TCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGAACACAGCCAAGTTCTaGCAAGGAAGCAGATCTACA | + |
Preference number: 2 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQNTAKF*QGSRST Trigger: TGTAGATCTGCTTCCTTGTCAGAACTTGGCTGTGTT...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | ATACTCCTAAAACCCTGTCTAAGCCCAAAGTCCCTCATTCTCACCCACTGCCAGACACACAGGCTAAAGTaGGAAATGGAAGTGGGAGTT | + |
Preference number: 2 (lower is better) Translates to: ILLKPCLSPKSLILTHCQTHRLK*EMEVGV Trigger: AACTCCCACTTCCATTTCCCACTTTAGCCTGTGTGT...CTGGCAGTGGGTGAGAATGAGGGACTTTGGGCTTAGACAGGGTTTTAGGAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 90 bp | GGTCCCCACTGGTCTACTCCAAGAAAGAACCTTATTAGGTTTTCCTaGAGACAAATCTCAGTTCTATGGGACCAGGAAGTTCCATCTCCA | + |
Preference number: 2 (lower is better) Translates to: GPHWSTPRKNLIRFS*RQISVLWDQEVPSP Trigger: TGGAGATGGAACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAGGTTCTTTCTTGGAGTAGACCAGTGGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CCA 90 bp | TTGGTTCTGAATGCTGAGGTCAGAGGTCCTTACAAAGGTCTCCACTCCTACTCACACTCAATGCACAGATaGCTGCAGTTAAATAAGGGA | + |
Preference number: 2 (lower is better) Translates to: LVLNAEVRGPYKGLHSYSHSMHR*LQLNKG Trigger: TCCCTTATTTAACTGCAGCCATCTGTGCATTGAGTG...TGAGTAGGAGTGGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | CTCTGGGACAATGGGCTGCCTGCCTCCTGGCCCTGCTaGCTTGCCTTGTGTCTGGGTGACCTGAGCCATCCT | + |
Preference number: 3 (lower is better) Translates to: LWDNGLPASWPC*LALCLGDLSHP Trigger: AGGATGGCTCAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCAGCCCATTGTCCCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | AGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTaGGTGGAGAGCACAGAACACAGGACGGACACCTGC | + |
Preference number: 3 (lower is better) Translates to: RQPGAVCSGNGA*VESTEHRTDTC Trigger: GCAGGTGTCCGTCCTGTGTTCTGTGCTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | CAGGCCGGCAGGACTTCCAGTTCCCACATCGGCTCCTaGAGAAGTCAGCGGGAGCTCACTGTACTGCCCCTG | + |
Preference number: 3 (lower is better) Translates to: QAGRTSSSHIGS*RSQRELTVLPL Trigger: CAGGGGCAGTACAGTGAGCTCCCGCTGACTTCTCCAGGAGCCGATGTGGGAACTGGAAGTCCTGCCGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | CCTGGCCCTGCTGCCTTGCCTTGTGTCTGGGTGACCTaGGCCATCCTCGGGCTGCTTCTCATTAGTGGCTGG | + |
Preference number: 3 (lower is better) Translates to: PGPAALPCVWVT*AILGLLLISGW Trigger: CCAGCCACTAATGAGAAGCAGCCCGAGGATGGCTCAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | TGCTTCTTAAGGCCCCACTGCCAGTCCACAGCTGGCTaGGTCCAAGACCAGCACACTCCCAGAGGGCTTGGC | + |
Preference number: 3 (lower is better) Translates to: CFLRPHCQSTAG*VQDQHTPRGLG Trigger: GCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | AGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTaGAGAGCACAGAACACAGGACGGACACCTGCCAAA | + |
Preference number: 3 (lower is better) Translates to: SQGQSALAMARG*RAQNTGRTPAK Trigger: TTTGGCAGGTGTCCGTCCTGTGTTCTGTGCTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | TGCCTCCTGGCCCTGCTGCCTTGCCTTGTGTCTGGGTaGCCTGAGCCATCCTCGGGCTGCTTCTCATTAGTG | + |
Preference number: 3 (lower is better) Translates to: CLLALLPCLVSG*PEPSSGCFSLV Trigger: CACTAATGAGAAGCAGCCCGAGGATGGCTCAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | ACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTaGCCCTGCTGCCTTGCCTTGTGTCTGGGTGACCTG | + |
Preference number: 3 (lower is better) Translates to: TYLLWDNGLPAS*PCCLALCLGDL Trigger: CAGGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | TTGCTGCTTCTTAAGGCCCCACTGCCAGTCCACAGCTaGCTGCGTCCAAGACCAGCACACTCCCAGAGGGCT | + |
Preference number: 3 (lower is better) Translates to: LLLLKAPLPVHS*LRPRPAHSQRA Trigger: AGCCCTCTGGGAGTGTGCTGGTCTTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | GCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTaGGTGGAGGTGAAACAAGGGGAGCAGAGGGGAGCA | + |
Preference number: 3 (lower is better) Translates to: ASSLCFLLSCIW*VEVKQGEQRGA Trigger: TGCTCCCCTCTGCTCCCCTTGTTTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | ACAGACAAGGGACCAACACCTCAAGCTGCCAGATGCTaGGGGTGCCAGATGGCACCGGTCACCTGCAGGTAC | + |
Preference number: 3 (lower is better) Translates to: TDKGPTPQAARC*GCQMAPVTCRY Trigger: GTACCTGCAGGTGACCGGTGCCATCTGGCACCCTCAGCATCTGGCAGCTTGAGGTGTTGGTCCCTTGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | ATGGACACTCCTGGCCCCGGGAAAGGTACAGGCACATaGGGGCCACCTGTAGCCGCCGTCTTGTGTCTTAGT | + |
Preference number: 3 (lower is better) Translates to: MDTPGPGKGTGT*GPPVAAVLCLS Trigger: ACTAAGACACAAGACGGCGGCTACAGGTGGCCCTCATGTGCCTGTACCTTTCCCGGGGCCAGGAGTGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | TTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTaGGGCCTCGGTCAGCAGACTGACAGCCACCCATCG | + |
Preference number: 3 (lower is better) Translates to: FQLCAQVSYSSE*GLGQQTDSHPS Trigger: CGATGGGTGGCTGTCAGTCTGCTGACCGAGGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | CCCAGGGATGAAGTTTGCTGCTTCTTAAGGCCCCACTaGCAGTCCACAGCTGGCTGCGTCCAAGACCAGCAC | + |
Preference number: 3 (lower is better) Translates to: PRDEVCCFLRPH*QSTAGCVQDQH Trigger: GTGCTGGTCTTGGACGCAGCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | CTTTCTCTGATGCAGACAGCCAGGGGCAGTCTGCTCTaGCAATGGCGCGTGGGTGGAGAGCACAGAACACAG | + |
Preference number: 3 (lower is better) Translates to: LSLMQTARGSLL*QWRVGGEHRTQ Trigger: CTGTGTTCTGTGCTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATCAGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | GCCTTTCACTTTTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTGAGGCCGCTGATCAGACCTCATaGCCCACTGGCCAGGCTGGG | + |
Preference number: 3 (lower is better) Translates to: AFHFFSSAHRSATAVSEAADQTS*PTGQAG Trigger: CCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGC...GGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGAAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | GCCTTTCACTTTTTCAGCTCTGCGCACAGGTCAGCTACAGCAGTGAGTGAGGCCACACTCCCAGAGGGCTaGGCCCAACCCACAGCCTCT | + |
Preference number: 3 (lower is better) Translates to: AFHFFSSAHRSATAVSEATLPEG*AQPTAS Trigger: AGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGT...GGCCTCACTCACTGCTGTAGCTGACCTGTGCGCAGAGCTGAAAAAGTGAAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGCCTGGCCCTGCTGCCTaGCCTTGTGTCTGGGTGACC | + |
Preference number: 3 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQPGPAA*PCVWVT Trigger: GGTCACCCAGACACAAGGCAAGGCAGCAGGGCCAGG...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | GGGGTGGCAGCAATCACAGGGAACACAGCCAAGTTCTaGCAAGGAAGCAGATCTACAGAGGGCTCCAGGCGG | + |
Preference number: 3 (lower is better) Translates to: GVAAITGNTAKF*QGSRSTEGSRR Trigger: CCGCCTGGAGCCCTCTGTAGATCTGCTTCCTTGTCAGAACTTGGCTGTGTTCCCTGTGATTGCTGCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | GGGTGCCAGATGGCACCGGTCACCTGCAGGTACCTCTaGACACCCAGTTACAGGGCTGTACTGGAATTTGTC | + |
Preference number: 3 (lower is better) Translates to: GCQMAPVTCRYL*TPSYRAVLEFV Trigger: GACAAATTCCAGTACAGCCCTGTAACTGGGTGTGCAGAGGTACCTGCAGGTGACCGGTGCCATCTGGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | TCTCCACTCCTACTCACCCCCAGGGATGAAGTTTGCTaGTTCTTAAGGCCCCACTGCCAGTCCACAGCTGGC | + |
Preference number: 3 (lower is better) Translates to: SPLLLTPRDEVC*FLRPHCQSTAG Trigger: GCCAGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAGGAGTGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | TCATTAGTGGCTGGACCACTCTGTGATGACGCTGCCTaGTACCTCTTCCCAGAGTTCATCCTCCTGGGGCGG | + |
Preference number: 3 (lower is better) Translates to: SLVAGPLCDDAA*YLFPEFILLGR Trigger: CCGCCCCAGGAGGATGAACTCTGGGAAGAGGTACCAGGCAGCGTCATCACAGAGTGGTCCAGCCACTAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | TGGCTGCGTCCAAGACCAGCACACTCCCAGAGGGCTTaGCCCAACCCACAGCCTCTACTCTTCTTCCTCTTT | + |
Preference number: 3 (lower is better) Translates to: WLRPRPAHSQRA*PNPQPLLFFLF Trigger: AAAGAGGAAGAAGAGTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGCAGGCCATGGCTGCGTaGTGTTTTGCCCCCTGGTGG | + |
Preference number: 3 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQQAMAA*CFAPWW Trigger: CCACCAGGGGGCAAAACACAACGCAGCCATGGCCTG...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | AGGTCTCCACTCCTACTCACCCCCAGGGATGAAGTTTaGTGCTTCTTAAGGCCCCACTGCCAGTCCACAGCT | + |
Preference number: 3 (lower is better) Translates to: RSPLLLTPRDEV*CFLRPHCQSTA Trigger: AGCTGTGGACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAGGAGTGGAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | AGCAGCCAGTCTAACAGGCACTCTGGAGGGGACACTTaGGCAGCAGGCCTAAGTTACATGGAGCCTGGATAC | + |
Preference number: 3 (lower is better) Translates to: SSQSNRHSGGDT*AAGLSYMEPGY Trigger: GTATCCAGGCTCCATGTAACTTAGGCCTGCTGCCCAAGTGTCCCCTCCAGAGTGCCTGTTAGACTGGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | GCAGCATCTTCAAGGAGGATGGCTCCAGTCTGTTCCTaGCTTTTGAGGTCCCTGCTGGCTTCCTGTGCACTC | + |
Preference number: 3 (lower is better) Translates to: AASSRRMAPVCS*LLRSLLASCAL Trigger: GAGTGCACAGGAAGCCAGCAGGGACCTCAAAAGCCAGGAACAGACTGGAGCCATCCTCCTTGAAGATGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR GCA 72 bp | TTTTGGGAAGCCTGGTTTGTATCAGCCTCCTCTCTGTaGTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTG | + |
Preference number: 3 (lower is better) Translates to: FWEAWFVSASSL*FLLSCIWWVEV Trigger: CACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR CCA 72 bp | CTCTTTGCAGGACTGTCTGCTGCCCTGGCCTTGAGGTaGACGTTATCTGTGGGCACTAGAAACACACAGGCT | + |
Preference number: 3 (lower is better) Translates to: LFAGLSAALALR*TLSVGTRNTQA Trigger: AGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR TCA 72 bp | GAGTTCTCTTTGCAGGACTGTCTGCTGCCCTGGCCTTaGGGTGGACGTTATCTGTGGGCACTAGAAACACAC | + |
Preference number: 3 (lower is better) Translates to: EFSLQDCLLPWP*GGRYLWALETH Trigger: GTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR TCA 72 bp | CCCAGTTACAGGGCTGTACTGGAATTTGTCCTTCCCTaGGACATATCTCCTCTGGGACAATGGGCTGCCTGC | + |
Preference number: 3 (lower is better) Translates to: PSYRAVLEFVLP*DISPLGQWAAC Trigger: GCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAATTCCAGTACAGCCCTGTAACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | CTTACAAAGGTCTCCACTCCTACTCACCCCCAGGGATaGAGTTTGCTGCTTCTTAAGGCCCCACTGCCAGTC | + |
Preference number: 3 (lower is better) Translates to: LTKVSTPTHPQG*SLLLLKAPLPV Trigger: GACTGGCAGTGGGGCCTTAAGAAGCAGCAAACTTCATCCCTGGGGGTGAGTAGGAGTGGAGACCTTTGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR TCA 72 bp | ACCCAGCTCTGCACATACCTGGGCCTCCTTTGGTTCTaGATGCTGAGGTCAGAGGTCCTTACAAAGGTCTCC | + |
Preference number: 3 (lower is better) Translates to: TQLCTYLGLLWF*MLRSEVLTKVS Trigger: GGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAAAGGAGGCCCAGGTATGTGCAGAGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | AGACTCTGTAAGAGTTCTCTTTGCAGGACTGTCTGCTaGCCTGGCCTTGAGGTGGACGTTATCTGTGGGCAC | + |
Preference number: 3 (lower is better) Translates to: RLCKSSLCRTVC*PGLEVDVICGH Trigger: GTGCCCACAGATAACGTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR CCA 72 bp | TTGTTTTGCCAATGGCCCTGGCTGGCCAGTCAGGCTTaGAGAACTTGTGCCTACACAACCAAGCCAAGCACA | + |
Preference number: 3 (lower is better) Translates to: LFCQWPWLASQA*RTCAYTTKPST Trigger: TGTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGCAAAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR-3UTR CAA 90 bp | CTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCCTCTGGAGGGGACACTaGGGCAGCAGGCCTAAGTTA | + |
Preference number: 3 (lower is better) Translates to: LHNQAKHKDSCLTDQVPFLWRGH*GSRPKL Trigger: TAACTTAGGCCTGCTGCCCAAGTGTCCCCTCCAGAG...GAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | AGTAGACTCTGTAAGAGTTCTCTTTGCAGGACTGTCTaGTGCCCTGGCCTTGAGGTGGACGTTATCTGTGGG | + |
Preference number: 3 (lower is better) Translates to: SRLCKSSLCRTV*CPGLEVDVICG Trigger: CCCACAGATAACGTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | AGGACTCAGTTAGGGACCCTGATGGCCATAGGTTCTTaGTGGCTCTTCTATGACTGCATCTTGCTGTGGGCT | + |
Preference number: 3 (lower is better) Translates to: RTQLGTLMAIGS*WLFYDCILLWA Trigger: AGCCCACAGCAAGATGCAGTCATAGAAGAGCCAGCAAGAACCTATGGCCATCAGGGTCCCTAACTGAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | CCCTGTCTAAGCCCAAAGTCCCTCATTCTCACCCACTaGCAGGAGCTAATTTCACAGACAAGGGACCAACAC | + |
Preference number: 3 (lower is better) Translates to: PCLSPKSLILTH*QELISQTRDQH Trigger: GTGTTGGTCCCTTGTCTGTGAAATTAGCTCCTGGCAGTGGGTGAGAATGAGGGACTTTGGGCTTAGACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | CTCCTGCTCTTTAAGCACAAGGTGATGTGGAGCTGTTaGTGTGGAAATCAGGGCACAGTGACGTCACTGACC | + |
Preference number: 3 (lower is better) Translates to: LLLFKHKVMWSC*CGNQGTVTSLT Trigger: GGTCAGTGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTTAAAGAGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR CCA 72 bp | GGACACTTGGGCAGCAGGCCTAAGTTACATGGAGCCTaGATACTCCTAAAACCCTGTCTAAGCCCAAAGTCC | + |
Preference number: 3 (lower is better) Translates to: GHLGSRPKLHGA*ILLKPCLSPKS Trigger: GGACTTTGGGCTTAGACAGGGTTTTAGGAGTATCCAGGCTCCATGTAACTTAGGCCTGCTGCCCAAGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR-3UTR CAA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCGTCTGTTCCTGGCTTTaGAGGTCCCTGCTGGCTTCC | + |
Preference number: 3 (lower is better) Translates to: TRSSLMSVLLVLGSLVCIVCSWL*RSLLAS Trigger: GGAAGCCAGCAGGGACCTCAAAAGCCAGGAACAGAC...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR TCA 72 bp | TCTGCACATACCTGGGCCTCCTTTGGTTCTGAATGCTaGGGTCAGAGGTCCTTACAAAGGTCTCCACTCCTA | + |
Preference number: 3 (lower is better) Translates to: SAHTWASFGSEC*GQRSLQRSPLL Trigger: TAGGAGTGGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAAAGGAGGCCCAGGTATGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | GGGTCATTCAGGCACAGTCGCTCCTTGAAACTGAAATaGGTGGACCTACAAAAAGCTCCCATGTGCTGTGGG | + |
Preference number: 3 (lower is better) Translates to: GSFRHSRSLKLK*VDLQKAPMCCG Trigger: CCCACAGCACATGGGAGCTTTTTGTAGGTCCACTCATTTCAGTTTCAAGGAGCGACTGTGCCTGAATGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATTTTGGGAAGCCTGGTTaGTATCAGCCTCCTCTCTGT | + |
Preference number: 3 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHFGKPG*YQPPLC Trigger: ACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAA...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR GCA 72 bp | TTAAGAGCAAGTAGTAGACTCTGTAAGAGTTCTCTTTaGAGGACTGTCTGCTGCCCTGGCCTTGAGGTGGAC | + |
Preference number: 3 (lower is better) Translates to: LRASSRLCKSSL*RTVCCPGLEVD Trigger: GTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCTACTACTTGCTCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | TACTGCATTAAGACTGCACCTTTGGGGTTGGAGGTGTaGCTCAGTGGTAGAGTAACAAAAGAAGGACCTGGG | + |
Preference number: 3 (lower is better) Translates to: YCIKTAPLGLEV*LSGRVTKEGPG Trigger: CCCAGGTCCTTCTTTTGTTACTCTACCACTGAGCCACACCTCCAACCCCAAAGGTGCAGTCTTAATGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCATACCTGGGCCTCCTTaGGTTCTGAATGCTGAGGTC | + |
Preference number: 3 (lower is better) Translates to: TRSSLMSVLLVLGSLVCIIPGPP*VLNAEV Trigger: GACCTCAGCATTCAGAACCAAAGGAGGCCCAGGTAT...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR-3UTR CAA 90 bp | TCAGGCTTCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTTGCCTTTAATGGGCTGTACTGGAATTaGTCCTTCCCTGAGACATAT | + |
Preference number: 3 (lower is better) Translates to: SGFTLIYWGSFKTGFAFNGLYWN*SFPETY Trigger: ATATGTCTCAGGGAAGGACAAATTCCAGTACAGCCC...ATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGAAGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR CCA 72 bp | CTGTTCTGCTCCAATCTTCCCTCTTTTTCTAATGATTaGTCTCTTCACAGAGAGGGCTCTGTCTCTGTGAGA | + |
Preference number: 3 (lower is better) Translates to: LFCSNLPSFSND*SLHREGSVSVR Trigger: TCTCACAGAGACAGAGCCCTCTCTGTGAAGAGACCAATCATTAGAAAAAGAGGGAAGATTGGAGCAGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CCA 72 bp | CTTATTAGGTTTTCCTTGAGACAAATCTCAGTTCTATaGGACCAGGAAGTTCCATCTCCAGTGACCTATGGA | + |
Preference number: 3 (lower is better) Translates to: LIRFSLRQISVL*DQEVPSPVTYG Trigger: TCCATAGGTCACTGGAGATGGAACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | GGTCTACTCCAAGAAAGAACCTTATTAGGTTTTCCTTaGGACAAATCTCAGTTCTATGGGACCAGGAAGTTC | + |
Preference number: 3 (lower is better) Translates to: GLLQERTLLGFP*DKSQFYGTRKF Trigger: GAACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAGGTTCTTTCTTGGAGTAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR TCA 72 bp | CAGGATATACTGGAATTTTTATTTAGATCTCAAAGTTaGGAGTGCTTTCCCGGGAAGGTATTTATAGGTTTA | + |
Preference number: 3 (lower is better) Translates to: QDILEFLFRSQS*ECFPGKVFIGL Trigger: TAAACCTATAAATACCTTCCCGGGAAAGCACTCTCAACTTTGAGATCTAAATAAAAATTCCAGTATATCCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | CTGATGCAGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTGGAGAGGGTGGTGACAAGGGCTaGAGTTCTGGGGGAGAGGGC | + |
Preference number: 4 (lower is better) Translates to: LMQTARGSLLWQWRVGGEGGDKG*SSGGEG Trigger: GCCCTCTCCCCCAGAACTGCAGCCCTTGTCACCACC...CTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTGGCTGCCAGAACGCCTaGGGTCTGCCCTCTTCGCTC | + |
Preference number: 4 (lower is better) Translates to: KTQVRGLIRPHCPLARLGGCQNA*GLPSSL Trigger: GAGCGAAGAGGGCAGACCTCAGGCGTTCTGGCAGCC...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | CCTGGAGAAGTCAGCGGGAGCTCACTGTACTGCCCCTGCACCCCAGATAGGCTACACACGGGGCCACCTTaGGCAGGTCCTCTGGGGACT | + |
Preference number: 4 (lower is better) Translates to: PGEVSGSSLYCPCTPDRLHTGPP*AGPLGT Trigger: AGTCCCCAGAGGACCTGCCCAAGGTGGCCCCGTGTG...TAGCCTATCTGGGGTGCAGGGGCAGTACAGTGAGCTCCCGCTGACTTCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TGCGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCACAGCCTCTACGCACAGCCTCCAGACTaGATGAGGACGGGCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: CVQDQHTPRGLGPTHSLYAQPPD*MRTGSP Trigger: GGGACTGCCCGTCCTCATCCAGTCTGGAGGCTGTGC...GTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGGGGAGAAAACCGGGAGGAACAAGGAGCCCATGGGACAAGGACTCCCCCTGAAGGCTGCCTaGAGCACAGTCGCTGCCTCA | + |
Preference number: 4 (lower is better) Translates to: EAVGEKTGRNKEPMGQGLPLKAA*STVAAS Trigger: TGAGGCAGCGACTGTGCTCCAGGCAGCCTTCAGGGG...GAGTCCTTGTCCCATGGGCTCCTTGTTCCTCCCGGTTTTCTCCCCCACTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TGCGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCACAGCCTCTACGCAATGAACCTGGCCTaGGCCAGGTATCCACGGAGG | + |
Preference number: 4 (lower is better) Translates to: CVQDQHTPRGLGPTHSLYAMNLA*ARYPRR Trigger: CCTCCGTGGATACCTGGCCCAGGCCAGGTTCATTGC...GTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TGCGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCACAGCCTCTACCAAGGGCTGCAGTTCTaGGGGAGAGGGCTCAGCCAA | + |
Preference number: 4 (lower is better) Translates to: CVQDQHTPRGLGPTHSLYQGLQF*GRGLSQ Trigger: TTGGCTGAGCCCTCTCCCCCAGAACTGCAGCCCTTG...GTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | CCTGGAGAAGTCAGCGGGAGCTCACTGTACTGCCCCTGCACCCCAGATAGGCTATCCAGCAGCTGCTCCTaGAGTGCACCCAGCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: PGEVSGSSLYCPCTPDRLSSSCS*SAPSSS Trigger: AGAGGAGCTGGGTGCACTGCAGGAGCAGCTGCTGGA...TAGCCTATCTGGGGTGCAGGGGCAGTACAGTGAGCTCCCGCTGACTTCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TGCGTCCAAGACCAGCACACTCCCAGAGGGCTTGGCCCAACCCACAGCCTCTACTCTTTCTCCAGCAGCTaGTCCTGCAGTGCACCCAGC | + |
Preference number: 4 (lower is better) Translates to: CVQDQHTPRGLGPTHSLYSFSSS*SCSAPS Trigger: GCTGGGTGCACTGCAGGAGCAGCTGCTGGAGAAAGA...GTAGAGGCTGTGGGTTGGGCCAAGCCCTCTGGGAGTGTGCTGGTCTTGGACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | CCTGGAGAAGTCAGCGGGAGCTCACTGTACTGCCCCTGCACCCCAGATAGGCTAGGGGGCAGGTTCAGATaGAGAGGTCTCCCTCAGCTC | + |
Preference number: 4 (lower is better) Translates to: PGEVSGSSLYCPCTPDRLGGRFR*RGLPQL Trigger: GAGCTGAGGGAGACCTCTGCATCTGAACCTGCCCCC...TAGCCTATCTGGGGTGCAGGGGCAGTACAGTGAGCTCCCGCTGACTTCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TGGCAGGCAGCCTCCAGGCCATGGCTGCGTTGTGTTTaGCCCCCTGGTGGAGAAAAATGGGAGGCAGCTGTC | + |
Preference number: 4 (lower is better) Translates to: WQAASRPWLRCV*PPGGEKWEAAV Trigger: GACAGCTGCCTCCCATTTTTCTCCACCAGGGGGCAAAACACAACGCAGCCATGGCCTGGAGGCTGCCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TTAGAAAACCCAAGTGCGGGGGCTGATCAGACCTCATaGCCCACTGGCCAGGCTGGGTGCACAGGTTGGCCC | + |
Preference number: 4 (lower is better) Translates to: LENPSAGADQTS*PTGQAGCTGWP Trigger: GGGCCAACCTGTGCACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTTCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAACCTCTCTTCAGAGCATaGGGCAGGGGGTTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: ISLLSVLPPQLHLVGGGEPLFRA*GRGLGA Trigger: AGCTCCCAACCCCCTGCCCCATGCTCTGAAGAGAGG...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | AAAACCCAAGTGCGGGGGCTGATCAGACCTCATTGCCCACTGGCCAGGCTGGGTGTGAATTGCTCAGCATaGGGTCCAGGTCCTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: KTQVRGLIRPHCPLARLGVNCSA*GPGPPS Trigger: TGAAGGAGGACCTGGACCGCATGCTGAGCAATTCAC...ACCCAGCCTGGCCAGTGGGCAATGAGGTCTGATCAGCCCCCGCACTTGGGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTTCCTCCCTCAAAGCCTaGTCCTGCTCCTGCCTCCCC | + |
Preference number: 4 (lower is better) Translates to: ICPSLRHISSGTMGCLPPSSLKA*SCSCLP Trigger: GGGGAGGCAGGAGCAGGAGCAGGCTTTGAGGGAGGA...AGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGGGGAGAAAACCGGGAGGAACAAGGAGCCCATGGGACAAGGACTCCAGCCACAGCTTCTGTaGGGTCAAGGACATTCTGCT | + |
Preference number: 4 (lower is better) Translates to: EAVGEKTGRNKEPMGQGLQPQLL*GQGHSA Trigger: AGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTG...GAGTCCTTGTCCCATGGGCTCCTTGTTCCTCCCGGTTTTCTCCCCCACTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | ACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCAGGCCGGGCAGGCTGGGAGACCTaGAGTCTGGGACTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: TKPSTRTLVLQIRCRSGRAGWET*SLGLCC Trigger: GCAGCAAAGTCCCAGACTCCAGGTCTCCCAGCCTGC...CCGGCCTGAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | AGTAGACTCTGTAAGAGTTCTCTTTGCAGGACTGTCTGCTGCCCTGGCCTTGAGGAAGGCCCGGCAGGCTaGGAGACCTGGAGTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: SRLCKSSLCRTVCCPGLEEGPAG*ETWSLG Trigger: TCCCAGACTCCAGGTCTCCCAGCCTGCCGGGCCTTC...CTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TGGTTACCCATCAGGCGGCCTACAGGGACTGTGGTCTaGGTGGCTTCAAGCCCCTCTGAATGTGGCATGACC | + |
Preference number: 4 (lower is better) Translates to: WLPIRRPTGTVV*VASSPSECGMT Trigger: GGTCATGCCACATTCAGAGGGGCTTGAAGCCACCAAGACCACAGTCCCTGTAGGCCGCCTGATGGGTAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | GGTTTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAGAGCTAGGTGTCCCCTaGAGGCTGCCTGGAGCACAG | + |
Preference number: 4 (lower is better) Translates to: GLLPPTRSSLMSVLLVLGELGVP*RLPGAQ Trigger: CTGTGCTCCAGGCAGCCTTCAGGGGACACCTAGCTC...TCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | GGTTTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAGACAGCAGCTGGCAATaGACCTGGCCTGGGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: GLLPPTRSSLMSVLLVLGDSSWQ*TWPGPG Trigger: ACCTGGCCCAGGCCAGGTTCATTGCCAGCTGCTGTC...TCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGGTGTCCCCTGAAGGCTaGCTGGAGCACAGTCGCTGC | + |
Preference number: 4 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQVSPEG*LEHSRC Trigger: GCAGCGACTGTGCTCCAGGCAGCCTTCAGGGGACAC...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | GTAGACAAAGCTGGGCCCTCCCTCTTCCTGGTCTCTAACTGGCAAGCCCAGCTCTGGGCTTCTTTCCTGTaGCTTCAGAACTCGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: VDKAGPSLFLVSNWQAQLWASFL*LQNSPG Trigger: TCCTGGCGAGTTCTGAAGCCACAGGAAAGAAGCCCA...GAGCTGGGCTTGCCAGTTAGAGACCAGGAAGAGGGAGGGCCCAGCTTTGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
||
3UTR CAA 72 bp | CCAATGGCCCTGGCTGGCCAGTCAGGCTTGGAGAACTaGTGCCTACACAACCAAGCCAAGCACAAGGACTCT | + |
Preference number: 4 (lower is better) Translates to: PMALAGQSGLEN*CLHNQAKHKDS Trigger: AGAGTCCTTGTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAAGGTTCAGCAGGGCACTaGTCATCTTCTTCTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: ISLLSVLPPQLHLVGGGEGSAGH*SSSSAS Trigger: AGAGGCAGAAGAAGATGAGCAGTGCCCTGCTGAACC...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | CTGATGCAGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTGGAGAGTTATTTTGGAGATGGTaGGTGAATTGCTCAGCATGC | + |
Preference number: 4 (lower is better) Translates to: LMQTARGSLLWQWRVGGELFWRW*VNCSAC Trigger: GCATGCTGAGCAATTCACCCACCATCTCCAAAATAA...CTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATGAAGTCCCAGAGACGTaGCCATGGCTGCCAGAACGC | + |
Preference number: 4 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHEVPET*PWLPER Trigger: GCGTTCTGGCAGCCATGGTCACGTCTCTGGGACTTC...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTTGCTACTCAGAGGCATaGTCCCTGCCGTCTTCAGAG | + |
Preference number: 4 (lower is better) Translates to: ICPSLRHISSGTMGCLPPCYSEA*SLPSSE Trigger: CTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCA...AGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | AGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAAGTGGGAAATGGATCAGCAGCCGGGGCTTaGTCCAGTCCCCGTAACCCT | + |
Preference number: 4 (lower is better) Translates to: RWTLSVGTRNTQAKVGNGSAAGA*SSPRNP Trigger: AGGGTTACGGGGACTGGAGCAAGCCCCGGCTGCTGA...TCCATTTCCCACTTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | ACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCAGGCCGGTCTCCTCCAGGTTGGTaGTCTTCATGTCCGTCTGCA | + |
Preference number: 4 (lower is better) Translates to: TKPSTRTLVLQIRCRSGRSPPGW*SSCPSA Trigger: TGCAGACGGACATGAAGACCACCAACCTGGAGGAGA...CCGGCCTGAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TTTGCTCACTCGGAACACTCAATGCACAGATGGCTGCAGTTAAATAAGGGAGGGCATGGGGCAGGGGGTTaGGAGCTACCCTCCTCACCA | + |
Preference number: 4 (lower is better) Translates to: FAHSEHSMHRWLQLNKGGHGAGG*ELPSSP Trigger: TGGTGAGGAGGGTAGCTCCCAACCCCCTGCCCCATG...CCCTCCCTTATTTAACTGCAGCCATCTGTGCATTGAGTGTTCCGAGTGAGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TTTGTTTTGCCAATGGCCCTGGCTGGCCAGTCAGGCTaGGAGAACTTGTGCCTACACAACCAAGCCAAGCAC | + |
Preference number: 4 (lower is better) Translates to: FVLPMALAGQSG*ENLCLHNQAKH Trigger: GTGCTTGGCTTGGTTGTGTAGGCACAAGTTCTCCAAGCCTGACTGGCCAGCCAGGGCCATTGGCAAAACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | ATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTTTTGGAGATGGTGGGTaGATTGCTCAGCATGCGGTC | + |
Preference number: 4 (lower is better) Translates to: ICPSLRHISSGTMGCLPPFGDGG*IAQHAV Trigger: GACCGCATGCTGAGCAATTCACCCACCATCTCCAAA...AGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCGGCTGCTTTTGCACTaGGATGTTGGATGGGGAGCG | + |
Preference number: 4 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHRLLLH*DVGWGA Trigger: CGCTCCCCATCCAACATCTCAGTGCAAAAGCAGCCG...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | AGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAAGTGGGAAATGGACTCCACAGGTGGTGGTaGCAAGGGCTGCAGTTCTGG | + |
Preference number: 4 (lower is better) Translates to: RWTLSVGTRNTQAKVGNGLHRWW*QGLQFW Trigger: CCAGAACTGCAGCCCTTGTCACCACCACCTGTGGAG...TCCATTTCCCACTTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TCAGGCTTCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTTGCCTTTAATCAGCTGCTCCTGCAGTaGACCCAGCTCCTCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: SGFTLIYWGSFKTGFAFNQLLLQ*TQLLSQ Trigger: CTGAGAGAGGAGCTGGGTGCACTGCAGGAGCAGCTG...ATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGAAGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GCCCTGGCCTTGAGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAACTGCTTCTCTTTTCTTaGGCCTGTGGGCCTTCCACT | + |
Preference number: 4 (lower is better) Translates to: ALALRWTLSVGTRNTQAKLLLFS*ACGPST Trigger: AGTGGAAGGCCCACAGGCGCAAGAAAAGAGAAGCAG...TTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGGGGAGAAAACCGGGAGGAACAAGGAGCCCATGGGACAAGGACTCCGTAACCCTTTATTTTaGAGATGGTGGGTGAATTGC | + |
Preference number: 4 (lower is better) Translates to: EAVGEKTGRNKEPMGQGLRNPLF*RWWVNC Trigger: GCAATTCACCCACCATCTCCAAAATAAAGGGTTACG...GAGTCCTTGTCCCATGGGCTCCTTGTTCCTCCCGGTTTTCTCCCCCACTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGCCTTCTCGCCTTCCCTaGCTGTCTCCAACTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQPSRLP*LSPTPS Trigger: AGAAGGAGTTGGAGACAGCCAGGGAAGGCGAGAAGG...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | AGAGTTCTCTTTGCAGGACTGTCTGCTGCCCTGGCCTaGAGGTGGACGTTATCTGTGGGCACTAGAAACACA | + |
Preference number: 4 (lower is better) Translates to: RVLFAGLSAALA*RWTLSVGTRNT Trigger: TGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | GTCACTGACCCAGCTCTGCACATACCTGGGCCTCCTTaGGTTCTGAATGCTGAGGTCAGAGGTCCTTACAAA | + |
Preference number: 4 (lower is better) Translates to: VTDPALHIPGPP*VLNAEVRGPYK Trigger: TTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAAAGGAGGCCCAGGTATGTGCAGAGCTGGGTCAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTTCTGCCGATCCTTTCTaGTGTTCTCCTCTTCCAAGC | + |
Preference number: 4 (lower is better) Translates to: ICPSLRHISSGTMGCLPPSADPF*CSPLPS Trigger: GCTTGGAAGAGGAGAACAGCAGAAAGGATCGGCAGA...AGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GCCCTGGCCTTGAGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAACCTTTCGGCTGCTTTTaGACTGAGATGTTGGATGGG | + |
Preference number: 4 (lower is better) Translates to: ALALRWTLSVGTRNTQAKPFGCF*TEMLDG Trigger: CCCATCCAACATCTCAGTGCAAAAGCAGCCGAAAGG...TTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCCTCAAAGCCTGCTCCTaGTCCTGCCTCCCCTTCTCG | + |
Preference number: 4 (lower is better) Translates to: TRSSLMSVLLVLGSLVCILKACS*SCLPFS Trigger: CGAGAAGGGGAGGCAGGAGCAGGAGCAGGCTTTGAG...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAATCACTTTTCTGGGTTTaGAGTAGTAGGGCGACTTTG | + |
Preference number: 4 (lower is better) Translates to: ISLLSVLPPQLHLVGGGESLFWV*SSRATL Trigger: CAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTGA...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | AGTAGACTCTGTAAGAGTTCTCTTTGCAGGACTGTCTGCTGCCCTGGCCTTGAGACTATTGTCAGAGTCTaGCTCGGAGTGCCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: SRLCKSSLCRTVCCPGLETIVRV*LGVPAA Trigger: TGCAGCAGGCACTCCGAGCCAGACTCTGACAATAGT...CTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR TCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATGTAGGGCGACTTTGGTaGTGTGGAAGGAGGTTTGTG | + |
Preference number: 4 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHVGRLW*CGRRFV Trigger: CACAAACCTCCTTCCACATCACCAAAGTCGCCCTAC...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GCCCTGGCCTTGAGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAATTCTCCTTGCATTGCTaGTCCAGCCTGAAGATCCTT | + |
Preference number: 4 (lower is better) Translates to: ALALRWTLSVGTRNTQAKFSLHC*SSLKIL Trigger: AAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAA...TTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGTCCTTCTCCTTGCATTaGTGCTCCAGCCTGAAGATC | + |
Preference number: 4 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQSFSLH*CSSLKI Trigger: GATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGA...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGGGGAGAAAACCGGGAGGAACAAGGAGCCCATGGGACAAGGACTCGTGGAAGGAGGTTTGTaGAAACTTTTCCTTTTTGTT | + |
Preference number: 4 (lower is better) Translates to: EAVGEKTGRNKEPMGQGLVEGGL*KLFLFV Trigger: AACAAAAAGGAAAAGTTTCCACAAACCTCCTTCCAC...GAGTCCTTGTCCCATGGGCTCCTTGTTCCTCCCGGTTTTCTCCCCCACTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | ACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTTGTATCTCCTCCTTCAGGCTCTaGTTCTCCTCGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: TRSSLMSVLLVLGSLVCISSFRL*FSSVSS Trigger: GGAGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGA...GATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | AAGCACAAGGTGATGTGGAGCTGTTGCTGTGGAAATCAGGGCACAGTGACGTCATCTCCAGGTCGATCTTaGACTGTAGCAGCTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: KHKVMWSCCCGNQGTVTSSPGRS*TVAAAS Trigger: TGAAGCAGCTGCTACAGTCCAAGATCGACCTGGAGA...TGACGTCACTGTGCCCTGATTTCCACAGCAACAGCTCCACATCACCTTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TTTGCTCACTCGGAACACTCAATGCACAGATGGCTGCAGTTAAATAAGGGAGGGAGCCTCCTCTTGTGTTaGGTTCTCTTCAGCCGGGGA | + |
Preference number: 4 (lower is better) Translates to: FAHSEHSMHRWLQLNKGGSLLLC*VLFSRG Trigger: TCCCCGGCTGAAGAGAACCCAACACAAGAGGAGGCT...CCCTCCCTTATTTAACTGCAGCCATCTGTGCATTGAGTGTTCCGAGTGAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | CCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTaGGGAAGCCTGGTTTGTATCAGCCTCCTCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: PTRSSLMSVLLV*GSLVCISLLSV Trigger: CACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTaGCTAGTTTTGGGAAGCCTGGTTTGTATCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: LLPPTRSSLMSV*LVLGSLVCISL Trigger: GAGGCTGATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | ATACTCCTAAAACCCTGTCTAAGCCCAAAGTCCCTCATTCTCACCCACTGCCAGATGTTTCCATGGCAATaGGCATCTCCTCCAGGTTGG | + |
Preference number: 4 (lower is better) Translates to: ILLKPCLSPKSLILTHCQMFPWQ*ASPPGW Trigger: CCAACCTGGAGGAGATGCGCATTGCCATGGAAACAT...CTGGCAGTGGGTGAGAATGAGGGACTTTGGGCTTAGACAGGGTTTTAGGAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GGTTTGCTCCCACCCACACGCAGCTCACTGATGTCTGTTTTGCTAGTTTTGGGATTGGACTGTAGCAGCTaGTTCATCTCCAGGTCTTTC | + |
Preference number: 4 (lower is better) Translates to: GLLPPTRSSLMSVLLVLGLDCSS*FISRSF Trigger: GAAAGACCTGGAGATGAAGCAGCTGCTACAGTCCAA...TCCCAAAACTAGCAAAACAGACATCAGTGAGCTGCGTGTGGGTGGGAGCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GTTTTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATAGTCTGGGACTTTGCTaGGTACAAGCTTCGAACGAG | + |
Preference number: 4 (lower is better) Translates to: VLHKRQAQGPGKLVLVTHSLGLC*VQASNE Trigger: CTCGTTCGAAGCTTGTACGCAGCAAAGTCCCAGACT...ATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | ATGACCATGCGGTCATACTGCATTAAGACTGCACCTTaGGGGTTGGAGGTGTGGCTCAGTGGTAGAGTAACA | + |
Preference number: 4 (lower is better) Translates to: MTMRSYCIKTAP*GLEVWLSGRVT Trigger: TGTTACTCTACCACTGAGCCACACCTCCAACCCCAAAGGTGCAGTCTTAATGCAGTATGACCGCATGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TTTGCTCACTCGGAACACTCAATGCACAGATGGCTGCAGTTAAATAAGGGAGGGTGCCTCATCCAGAGCTaGTTCTCTTTTCTTGCGCCT | + |
Preference number: 4 (lower is better) Translates to: FAHSEHSMHRWLQLNKGGCLIQS*FSFLAP Trigger: AGGCGCAAGAAAAGAGAAGCAGCTCTGGATGAGGCA...CCCTCCCTTATTTAACTGCAGCCATCTGTGCATTGAGTGTTCCGAGTGAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | ACTGATGTCTGTTTTGCTAGTTTTGGGAAGCCTGGTTaGTATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: TDVCFASFGKPG*YQPPLCASSSA Trigger: AGCTGAGGAGGAAGCACAGAGAGGAGGCTGATACAAACCAGGCTTCCCAAAACTAGCAAAACAGACATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | TCAGGCTTCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTTGCCTTTAATCTGCTCATCTTCTTCTaGCTCTTCACACCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: SGFTLIYWGSFKTGFAFNLLIFF*LFTPSF Trigger: GAAACTGGGTGTGAAGAGGCAGAAGAAGATGAGCAG...ATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGAAGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | AGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAAGTGGGAAATGGAGCGACTTTGGTGATGTaGAAGGAGGTTTGTGGAAAC | + |
Preference number: 4 (lower is better) Translates to: RWTLSVGTRNTQAKVGNGATLVM*KEVCGN Trigger: GTTTCCACAAACCTCCTTCCACATCACCAAAGTCGC...TCCATTTCCCACTTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR GCA 90 bp | GCCCTGGCCTTGAGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAATCCACATCACTTTTCTaGATATGTAAGGACTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ALALRWTLSVGTRNTQAKSTSLF*ICKDFF Trigger: GAAGAAGTCCTTACATATGCAGAAAAGTGATGTGGA...TTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTaGCCTTTAATAGATGAGCTGCTACACCAAAGGATG | + |
Preference number: 4 (lower is better) Translates to: SPSFTGAASRQA*PLIDELLHQRM Trigger: CATCCTTTGGTGTAGCAGCTCATCTATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | ATGCGGTCATACTGCATTAAGACTGCACCTTTGGGGTaGGAGGTGTGGCTCAGTGGTAGAGTAACAAAAGAA | + |
Preference number: 4 (lower is better) Translates to: MRSYCIKTAPLG*EVWLSGRVTKE Trigger: TTCTTTTGTTACTCTACCACTGAGCCACACCTCCAACCCCAAAGGTGCAGTCTTAATGCAGTATGACCGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CCA 90 bp | TTGGTTCTGAATGCTGAGGTCAGAGGTCCTTACAAAGGTCTCCACTCCTACTCACCTTTATTTTGGAGATaGTGGGTGAATTGCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: LVLNAEVRGPYKGLHSYSPLFWR*WVNCSA Trigger: TGCTGAGCAATTCACCCACCATCTCCAAAATAAAGG...TGAGTAGGAGTGGAGACCTTTGTAAGGACCTCTGACCTCAGCATTCAGAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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3UTR CAA 72 bp | TGGTCTACTCCAAGAAAGAACCTTATTAGGTTTTCCTaGAGACAAATCTCAGTTCTATGGGACCAGGAAGTT | + |
Preference number: 4 (lower is better) Translates to: WSTPRKNLIRFS*RQISVLWDQEV Trigger: AACTTCCTGGTCCCATAGAACTGAGATTTGTCTCAAGGAAAACCTAATAAGGTTCTTTCTTGGAGTAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS GCA 90 bp | AGTGCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTTGGAGATaGTCTTGTTCCTCACACGGGGCCACCTTGGGCAGGTCCTCTGGG | + |
Preference number: 5 (lower is better) Translates to: SAPSSSLRLFTVPWR*SCSSHGATLGRSSG Trigger: CCCAGAGGACCTGCCCAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 90 bp | CCTCCTCACCAGCACTATTGTCAGAGTCTGGCTCGGAGTGCCTGCTaGAGGGCGAGGGGGCATGGAGCTCTGGATGAGCCTCATGAGTCA | + |
Preference number: 5 (lower is better) Translates to: PPHQHYCQSLARSAC*RARGHGALDEPHES Trigger: TGACTCATGAGGCTCATCCAGAGCTCCATGCCCCCTCGCCCTGCAGCAGGCACTCCGAGCCAGACTCTGACAATAGTGCTGGTGAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | TACCCTCCTCACCAGCACTATTGTCAGAGTCTGGCTCGGAGTGCCTaGTGCAGGGCGAGGGGGCATGGAGCTCTGGATGAGCCTCATGAG | + |
Preference number: 5 (lower is better) Translates to: YPPHQHYCQSLARSA*CRARGHGALDEPHE Trigger: CTCATGAGGCTCATCCAGAGCTCCATGCCCCCTCGCCCTGCAGCAGGCACTCCGAGCCAGACTCTGACAATAGTGCTGGTGAGGAGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | CAGGCGGTTCCTCTGCCTCATCTTCGTCCTTCGCAGCCTCCCCACTaGTCGCCTCGCTGTTCTTTCCTGATGGACCCCATTCGGGAGAAG | + |
Preference number: 5 (lower is better) Translates to: QAVPLPHLRPSQPPH*SPRCSFLMDPIREK Trigger: CTTCTCCCGAATGGGGTCCATCAGGAAAGAACAGCGAGGCGAGCAGTGGGGAGGCTGCGAAGGACGAAGATGAGGCAGAGGAACCGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CCA 90 bp | TCCTGCAGTGCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTTaGAGATGCTCTTGTTCCTCACACGGGGCCACCTTGGGCAGGTCC | + |
Preference number: 5 (lower is better) Translates to: SCSAPSSSLRLFTVP*RCSCSSHGATLGRS Trigger: GGACCTGCCCAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGCACTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | CGCCTGCAGGGTCCTAATGGCAGCCTCTCTCCTCTCTTCAGAGCATaGGGCAGGGGGTTGGGAGCTACCCTCCTCACCAGCACTATTGTC | + |
Preference number: 5 (lower is better) Translates to: RLQGPNGSLSPLFRA*GRGLGATLLTSTIV Trigger: GACAATAGTGCTGGTGAGGAGGGTAGCTCCCAACCCCCTGCCCCATGCTCTGAAGAGAGGAGAGAGGCTGCCATTAGGACCCTGCAGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | ACAGTCGCTGCCTCATCCAGAGCTGCTTCTCTTTTCTTGCGCCTGTaGGCCTTCCACTGCGCCTGCAGGGTCCTAATGGCAGCCTCTCTC | + |
Preference number: 5 (lower is better) Translates to: TVAASSRAASLFLRL*AFHCACRVLMAASL Trigger: GAGAGAGGCTGCCATTAGGACCCTGCAGGCGCAGTGGAAGGCCCACAGGCGCAAGAAAAGAGAAGCAGCTCTGGATGAGGCAGCGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | GAGGACGCCGCAATCTCTCGACAGCAGCTGGCAATGAACCTGGCCTaGGCCAGGTATCCACGGAGGATGGACTGGATAACGATGACAGCC | + |
Preference number: 5 (lower is better) Translates to: EDAAISRQQLAMNLA*ARYPRRMDWITMTA Trigger: GGCTGTCATCGTTATCCAGTCCATCCTCCGTGGATACCTGGCCCAGGCCAGGTTCATTGCCAGCTGCTGTCGAGAGATTGCGGCGTCCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | GGGGTTGGGCCACACCTGTTTCGAGGATCCCAGCCACAGCTTCTGTaGGGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTGCCGT | + |
Preference number: 5 (lower is better) Translates to: GVGPHLFRGSQPQLL*GQGHSATQRHAPCR Trigger: ACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGATCCTCGAAACAGGTGTGGCCCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135028.5 |
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CDS GCA 90 bp | CGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCTCGGTCAGCTCCTaGACACTCCGTGTTAGGTTCAGCAGGGCACTGCTCATCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: RSRSSFRLWFSSVSS*TLRVRFSRALLIFF Trigger: GAAGAAGATGAGCAGTGCCCTGCTGAACCTAACACGGAGTGTGCAGGAGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGACCTGGACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | TTGGTGAGTGCTTCAACTTCCTCCCTCAAAGCCTGCTCCTGCTCCTaGCTCCCCTTCTCGCCTTCCCTGGCTGTCTCCAACTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: LVSASTSSLKACSCS*LPFSPSLAVSNSFS Trigger: GGAGAAGGAGTTGGAGACAGCCAGGGAAGGCGAGAAGGGGAGGCAGGAGCAGGAGCAGGCTTTGAGGGAGGAAGTTGAAGCACTCACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | GTGGGTGAATTGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTaGTTCTCCTCGGTCAGCTCCTGCACACTCCGTGTTAGGTTCAGC | + |
Preference number: 5 (lower is better) Translates to: VGELLSMRSRSSFRL*FSSVSSCTLRVRFS Trigger: GCTGAACCTAACACGGAGTGTGCAGGAGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | GTCTGGCTCGGAGTGCCTGCTGCAGGGCGAGGGGGCATGGAGCTCTaGATGAGCCTCATGAGTCACTGCTACGAAGGAGTTTTTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: VWLGVPAAGRGGMEL*MSLMSHCYEGVFLF Trigger: GAAGAGAAAAACTCCTTCGTAGCAGTGACTCATGAGGCTCATCCAGAGCTCCATGCCCCCTCGCCCTGCAGCAGGCACTCCGAGCCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | CCCAGAGACGTGACCCTGTTTCGAGGATCCCAGCCACAGCTTCTGTaGGGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTGCCGT | + |
Preference number: 5 (lower is better) Translates to: PRDVTLFRGSQPQLL*GQGHSATQRHAPCR Trigger: ACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGATCCTCGAAACAGGGTCACGTCTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077890.12 |
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CDS-3UTR CAA 90 bp | CTGATGCAGACAGCCAGGGGCAGTCTGCTCTGGCAATGGCGCGTGGGTGGAGAGCCAAGCGCCGAAGCTTaGTTCTCATCAGATCCACAT | + |
Preference number: 5 (lower is better) Translates to: LMQTARGSLLWQWRVGGEPSAEA*FSSDPH Trigger: ATGTGGATCTGATGAGAACAAAGCTTCGGCGCTTGG...CTCTCCACCCACGCGCCATTGCCAGAGCAGACTGCCCCTGGCTGTCTGCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS GCA 90 bp | GTTTCGAGGATCCCAGCCACAGCTTCTGTGGGGTCAAGGACATTCTaGTACTCAGAGGCATGCTCCCTGCCGTCTTCAGAGATCGCCAGG | + |
Preference number: 5 (lower is better) Translates to: VSRIPATASVGSRTF*YSEACSLPSSEIAR Trigger: CCTGGCGATCTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGATCCTCGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS GCA 90 bp | TGTAGCAGCTGCTTCATCTCCAGGTCTTTCTCCAGCAGCTGCTCCTaGAGTGCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTTGG | + |
Preference number: 5 (lower is better) Translates to: CSSCFISRSFSSSCS*SAPSSSLRLFTVPW Trigger: CCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGCACTGCAGGAGCAGCTGCTGGAGAAAGACCTGGAGATGAAGCAGCTGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | TTGGGCCACACTACCCTGTTTCGAGGATCCCAGCCACAGCTTCTGTaGGGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTGCCGT | + |
Preference number: 5 (lower is better) Translates to: LGHTTLFRGSQPQLL*GQGHSATQRHAPCR Trigger: ACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGATCCTCGAAACAGGGTAGTGTGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CAA 90 bp | CTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCGCATGGGGCAGGGGGTaGGGAGCTACCCTCCTCACC | + |
Preference number: 5 (lower is better) Translates to: LHNQAKHKDSCLTDQVPFAWGRG*GATLLT Trigger: GGTGAGGAGGGTAGCTCCCAACCCCCTGCCCCATGC...GAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS GCA 90 bp | GCCACAGCTTCTGTGGGGTCAAGGACATTCTGCTACTCAGAGGCATaGTCCCTGCCGTCTTCAGAGATCGCCAGGAGGTCACTTTTCTGG | + |
Preference number: 5 (lower is better) Translates to: ATASVGSRTFCYSEA*SLPSSEIARRSLFW Trigger: CCAGAAAAGTGACCTCCTGGCGATCTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS CCA 90 bp | CCAGCCCGTGTCAGGCTTCTTCTCTGCCAAGGTTCGCACGAAGTCTaGGCCTCGACTTGGATCCAGAAGCTGTTCTATCTGCCGATCCTT | + |
Preference number: 5 (lower is better) Translates to: PARVRLLLCQGSHEV*ASTWIQKLFYLPIL Trigger: AAGGATCGGCAGATAGAACAGCTTCTGGATCCAAGTCGAGGCCCAGACTTCGTGCGAACCTTGGCAGAGAAGAAGCCTGACACGGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | CTGCGTACAAGCTTCGAACGAGCTAGGTGTCCCCTGAAGGCTGCCTaGAGCACAGTCGCTGCCTCATCCAGAGCTGCTTCTCTTTTCTTG | + |
Preference number: 5 (lower is better) Translates to: LRTSFERARCPLKAA*STVAASSRAASLFL Trigger: CAAGAAAAGAGAAGCAGCTCTGGATGAGGCAGCGACTGTGCTCCAGGCAGCCTTCAGGGGACACCTAGCTCGTTCGAAGCTTGTACGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | CTGGCAATGAACCTGGCCTGGGCCAGGTATCCACGGAGGATGGACTaGATAACGATGACAGCCTCCTCTTGTGTTGGGTTCTCTTCAGCC | + |
Preference number: 5 (lower is better) Translates to: LAMNLAWARYPRRMD*ITMTASSCVGFSSA Trigger: GGCTGAAGAGAACCCAACACAAGAGGAGGCTGTCATCGTTATCCAGTCCATCCTCCGTGGATACCTGGCCCAGGCCAGGTTCATTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 90 bp | TTGGGCCACAATACCCTGTTTCGAGGATCCCAGCCACAGCTTCTGTaGGGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTGCCGT | + |
Preference number: 5 (lower is better) Translates to: LGHNTLFRGSQPQLL*GQGHSATQRHAPCR Trigger: ACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGATCCTCGAAACAGGGTATTGTGGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142081.6 |
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CDS TCA 90 bp | GGGCTTGCTCCAGTCCCCGTAACCCTTTATTTTGGAGATGGTGGGTaGATTGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTGGTT | + |
Preference number: 5 (lower is better) Translates to: GLAPVPVTLYFGDGG*IAQHAVQVLLQALV Trigger: AACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGGACTGGAGCAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | CCCCGTAACCCTTTATTTTGGAGATGGTGGGTGAATTGCTCAGCATaGGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCTCGGTCAGCT | + |
Preference number: 5 (lower is better) Translates to: PRNPLFWRWWVNCSA*GPGPPSGSGSPRSA Trigger: AGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | TCTCGCCTTCCCTGGCTGTCTCCAACTCCTTCTCCAGGTCGATCTTaGACTGTAGCAGCTGCTTCATCTCCAGGTCTTTCTCCAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: SRLPWLSPTPSPGRS*TVAAASSPGLSPAA Trigger: AGCTGCTGGAGAAAGACCTGGAGATGAAGCAGCTGCTACAGTCCAAGATCGACCTGGAGAAGGAGTTGGAGACAGCCAGGGAAGGCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS-3UTR CAA 90 bp | ATCAGCCTCCTCTCTGTGCTTCCTCCTCAGCTGCATCTGGTGGGTGGAGGTGAACTGAAGATCCTTTGTTaGAGCCCGGTGATGACCCAG | + |
Preference number: 5 (lower is better) Translates to: ISLLSVLPPQLHLVGGGELKILC*SPVMTQ Trigger: CTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAG...TTCACCTCCACCCACCAGATGCAGCTGAGGAGGAAGCACAGAGAGGAGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CAA 90 bp | ACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCAGGCCGGGTGTTGTCCTTCTCCTaGCATTGCTGCTCCAGCCTG | + |
Preference number: 5 (lower is better) Translates to: TKPSTRTLVLQIRCRSGRVLSFS*HCCSSL Trigger: CAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACAC...CCGGCCTGAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CAA 90 bp | ATTTGTCCTTCCCTGAGACATATCTCCTCTGGGACAATGGGCTGCCTGCCTCCTGAGATGGTGGGTGAATaGCTCAGCATGCGGTCCAGG | + |
Preference number: 5 (lower is better) Translates to: ICPSLRHISSGTMGCLPPEMVGE*LSMRSR Trigger: CCTGGACCGCATGCTGAGCAATTCACCCACCATCTC...AGGAGGCAGGCAGCCCATTGTCCCAGAGGAGATATGTCTCAGGGAAGGACAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CAA 90 bp | GCCCTGGCCTTGAGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAAGCTGCTTCTCTTTTCTaGCGCCTGTGGGCCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: ALALRWTLSVGTRNTQAKAASLF*RLWAFH Trigger: GTGGAAGGCCCACAGGCGCAAGAAAAGAGAAGCAGC...TTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCTCAAGGCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS GCA 90 bp | CTTCTGTGGGGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTaGCGTCTTCAGAGATCGCCAGGAGGTCACTTTTCTGGGTTTGGA | + |
Preference number: 5 (lower is better) Translates to: LLWGQGHSATQRHAP*RLQRSPGGHFSGFG Trigger: TCCAAACCCAGAAAAGTGACCTCCTGGCGATCTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS GCA 90 bp | TGCTCCAGTCCCCGTAACCCTTTATTTTGGAGATGGTGGGTGAATTaGTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: CSSPRNPLFWRWWVN*SACGPGPPSGSGSP Trigger: AGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGGACTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | GCATGCTCCCTGCCGTCTTCAGAGATCGCCAGGAGGTCACTTTTCTaGGTTTGGAGTAGTAGGGCGACTTTGGTGATGTGGAAGGAGGTT | + |
Preference number: 5 (lower is better) Translates to: ACSLPSSEIARRSLF*VWSSRATLVMWKEV Trigger: AACCTCCTTCCACATCACCAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTGACCTCCTGGCGATCTCTGAAGACGGCAGGGAGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS-3UTR CAA 90 bp | TTACACAAACGCCAGGCACAGGGCCCTGGGAAATTAGTTCTGGTTACCCATCAGTCCTTGGAGATGCTCTaGTTCCTCACACGGGGCCAC | + |
Preference number: 5 (lower is better) Translates to: LHKRQAQGPGKLVLVTHQSLEML*FLTRGH Trigger: GTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGA...CTGATGGGTAACCAGAACTAATTTCCCAGGGCCCTGTGCCTGGCGTTTGTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS GCA 90 bp | GCAGGGCGAGGGGGCATGGAGCTCTGGATGAGCCTCATGAGTCACTaGTACGAAGGAGTTTTTCTCTTCTCTCTTAGCTTCTTCCAGTTC | + |
Preference number: 5 (lower is better) Translates to: AGRGGMELWMSLMSH*YEGVFLFSLSFFQF Trigger: GAACTGGAAGAAGCTAAGAGAGAAGAGAAAAACTCCTTCGTAGCAGTGACTCATGAGGCTCATCCAGAGCTCCATGCCCCCTCGCCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | AGGAACTCACCTTTATTTTGGAGATGGTGGGTGAATTGCTCAGCATaGGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCTCGGTCAGCT | + |
Preference number: 5 (lower is better) Translates to: RNSPLFWRWWVNCSA*GPGPPSGSGSPRSA Trigger: AGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CCA 90 bp | TCCCTGCCGTCTTCAGAGATCGCCAGGAGGTCACTTTTCTGGGTTTaGAGTAGTAGGGCGACTTTGGTGATGTGGAAGGAGGTTTGTGGA | + |
Preference number: 5 (lower is better) Translates to: SLPSSEIARRSLFWV*SSRATLVMWKEVCG Trigger: TCCACAAACCTCCTTCCACATCACCAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTGACCTCCTGGCGATCTCTGAAGACGGCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS CCA 90 bp | AGGCTTCTTCTCTGCCAAGGTTCGCACGAAGTCTGGGCCTCGACTTaGATCCAGAAGCTGTTCTATCTGCCGATCCTTTCTGCTGTTCTC | + |
Preference number: 5 (lower is better) Translates to: RLLLCQGSHEVWAST*IQKLFYLPILSAVL Trigger: GAGAACAGCAGAAAGGATCGGCAGATAGAACAGCTTCTGGATCCAAGTCGAGGCCCAGACTTCGTGCGAACCTTGGCAGAGAAGAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | CCAGGAGGGTCTGCAGACGATGGATCTCTTCGTAGTATGTTTCCATaGCAATGCGCATCTCCTCCAGGTTGGTGGTCTTCATGTCCGTCT | + |
Preference number: 5 (lower is better) Translates to: PGGSADDGSLRSMFP*QCASPPGWWSSCPS Trigger: AGACGGACATGAAGACCACCAACCTGGAGGAGATGCGCATTGCCATGGAAACATACTACGAAGAGATCCATCGTCTGCAGACCCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | TGCTCATCTTCTTCTGCCTCTTCACACCCAGTTTCTTCTCCACCATaGGCTTCTTTCCTGTGGCTTCAGAACTCGCCAGGAGGGTCTGCA | + |
Preference number: 5 (lower is better) Translates to: CSSSSASSHPVSSPP*ASFLWLQNSPGGSA Trigger: TGCAGACCCTCCTGGCGAGTTCTGAAGCCACAGGAAAGAAGCCCATGGTGGAGAAGAAACTGGGTGTGAAGAGGCAGAAGAAGATGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | GGGTCTGCAGACGATGGATCTCTTCGTAGTATGTTTCCATGGCAATaGGCATCTCCTCCAGGTTGGTGGTCTTCATGTCCGTCTGCAGTT | + |
Preference number: 5 (lower is better) Translates to: GSADDGSLRSMFPWQ*ASPPGWWSSCPSAV Trigger: AACTGCAGACGGACATGAAGACCACCAACCTGGAGGAGATGCGCATTGCCATGGAAACATACTACGAAGAGATCCATCGTCTGCAGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 90 bp | GGCTTTCTGAGGAACTCACCTTTATTTTGGAGATGGTGGGTGAATTaGTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: GFLRNSPLFWRWWVN*SACGPGPPSGSGSP Trigger: AGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS GCA 90 bp | TCCGTCTGCAGTTTGTTGATAGTGTTGTCCTTCTCCTTGCATTGCTaGTCCAGCCTGAAGATCCTTTGTTTGAGCCCGGTGATGACCCAG | + |
Preference number: 5 (lower is better) Translates to: SVCSLLIVLSFSLHC*SSLKILCLSPVMTQ Trigger: CTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 90 bp | TCGATTGCTTTGGGCTTTCTGAGGAACTCACCTTTATTTTGGAGATaGTGGGTGAATTGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGC | + |
Preference number: 5 (lower is better) Translates to: SIALGFLRNSPLFWR*WVNCSACGPGPPSG Trigger: GCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCCCAAAGCAATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS GCA 90 bp | ATGTCCGTCTGCAGTTTGTTGATAGTGTTGTCCTTCTCCTTGCATTaGTGCTCCAGCCTGAAGATCCTTTGTTTGAGCCCGGTGATGACC | + |
Preference number: 5 (lower is better) Translates to: MSVCSLLIVLSFSLH*CSSLKILCLSPVMT Trigger: GGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS-3UTR CAA 90 bp | AGGTGGACGTTATCTGTGGGCACTAGAAACACACAGGCTAAAGTGGGAAATGGAGTCCTTCTCCTTGCATaGCTGCTCCAGCCTGAAGAT | + |
Preference number: 5 (lower is better) Translates to: RWTLSVGTRNTQAKVGNGVLLLA*LLQPED Trigger: ATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGAC...TCCATTTCCCACTTTAGCCTGTGTGTTTCTAGTGCCCACAGATAACGTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS TCA 90 bp | TGGAGCACAGTCGCTGCCTCATCCAGAGCTGCTTCTCTTTTCTCATaGGTCACTGCTACGAAGGAGTTTTTCTCTTCTCTCTTAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: WSTVAASSRAASLFS*VTATKEFFSSLLAS Trigger: AGAAGCTAAGAGAGAAGAGAAAAACTCCTTCGTAGCAGTGACTCATGAGAAAAGAGAAGCAGCTCTGGATGAGGCAGCGACTGTGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS-3UTR CAA 90 bp | AGTAGACTCTGTAAGAGTTCTCTTTGCAGGACTGTCTGCTGCCCTGGCCTTGAGAGTTTGTTGATAGTGTaGTCCTTCTCCTTGCATTGC | + |
Preference number: 5 (lower is better) Translates to: SRLCKSSLCRTVCCPGLESLLIV*SFSLHC Trigger: GCAATGCAAGGAGAAGGACAACACTATCAACAAACT...CTCAAGGCCAGGGCAGCAGACAGTCCTGCAAAGAGAACTCTTACAGAGTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS-3UTR CAA 90 bp | TCAGGCTTCACCCTCATTTACTGGGGCAGCTTCAAGACAGGCTTTGCCTTTAATTCCGTCTGCAGTTTGTaGATAGTGTTGTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: SGFTLIYWGSFKTGFAFNSVCSL*IVLSFS Trigger: GGAGAAGGACAACACTATCAACAAACTGCAGACGGA...ATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAGTAAATGAGGGTGAAGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS TCA 90 bp | GATCCACATCACTTTTCTGCATATGTAAGGACTTCTTCAACTCGATaGTCTCGTCGTACATGTCCTCCTTCTCTCTGTAGACGGAAGTCC | + |
Preference number: 5 (lower is better) Translates to: DPHHFSAYVRTSSTR*SRRTCPPSLCRRKS Trigger: GGACTTCCGTCTACAGAGAGAAGGAGGACATGTACGACGAGATCATCGAGTTGAAGAAGTCCTTACATATGCAGAAAAGTGATGTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000142081.6 |
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CDS-3UTR CAA 90 bp | CTACACAACCAAGCCAAGCACAAGGACTCTTGTCTTACAGATCAGGTGCCGTTCGATGTGGAAGGAGGTTaGTGGAAACTTTTCCTTTTT | + |
Preference number: 5 (lower is better) Translates to: LHNQAKHKDSCLTDQVPFDVEGG*WKLFLF Trigger: AAAAAGGAAAAGTTTCCACAAACCTCCTTCCACATC...GAACGGCACCTGATCTGTAAGACAAGAGTCCTTGTGCTTGGCTTGGTTGTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS CCA 72 bp | CACGCGTGCTCCGAGGTAAGCGTGGGGCTCGGGGGTTaGGCCACAATACCCTGTTTCGAGGATCCCAGCCAC | + |
Preference number: 6 (lower is better) Translates to: HACSEVSVGLGG*ATIPCFEDPSH Trigger: GTGGCTGGGATCCTCGAAACAGGGTATTGTGGCCCAACCCCCGAGCCCCACGCTTACCTCGGAGCACGCGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142081.6 |
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CDS TCA 72 bp | CTCCTCCGAGGCACAGAGCTCCTTGCGGATCACTCCTaGGTAGGGCTGCAGGTCAGGCGGTTCCTCTGCCTC | + |
Preference number: 6 (lower is better) Translates to: LLRGTELLADHS*VGLQVRRFLCL Trigger: GAGGCAGAGGAACCGCCTGACCTGCAGCCCTACTCAGGAGTGATCCGCAAGGAGCTCTGTGCCTCGGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | GGCCCGGCAGGCTGGGAGACCTGGAGTCTGGGACTTTaGTGCGTACAAGCTTCGAACGAGCTAGGTGTCCCC | + |
Preference number: 6 (lower is better) Translates to: GPAGWETWSLGL*CVQASNELGVP Trigger: GGGGACACCTAGCTCGTTCGAAGCTTGTACGCAGCAAAGTCCCAGACTCCAGGTCTCCCAGCCTGCCGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | AGGTCTCCCTCAGCTCCTCCGAGGCACAGAGCTCCTTaGGGATCACTCCTGAGTAGGGCTGCAGGTCAGGCG | + |
Preference number: 6 (lower is better) Translates to: RSPSAPPRHRAP*GSLLSRAAGQA Trigger: CGCCTGACCTGCAGCCCTACTCAGGAGTGATCCGCAAGGAGCTCTGTGCCTCGGAGGAGCTGAGGGAGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 72 bp | GAGGTCTCCCTCAGCTCCTCCGAGGCACAGAGCTCCTaGCGGATCACTCCGGGAGAAGCTCTGAGGGAGGGT | + |
Preference number: 6 (lower is better) Translates to: EVSLSSSEAQSS*RITPGEALREG Trigger: ACCCTCCCTCAGAGCTTCTCCCGGAGTGATCCGCAAGGAGCTCTGTGCCTCGGAGGAGCTGAGGGAGACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041783.14 |
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CDS CAA 90 bp | GGGCTGAGAAGGCCCGGCAGGCTGGGAGACCTGGAGTCTGGGACTTaGCTGCGTACAAGCTTCGAACGAGCTAGGTGTCCCCTGAAGGCT | + |
Preference number: 6 (lower is better) Translates to: GLRRPGRLGDLESGT*LRTSFERARCPLKA Trigger: AGCCTTCAGGGGACACCTAGCTCGTTCGAAGCTTGTACGCAGCAAAGTCCCAGACTCCAGGTCTCCCAGCCTGCCGGGCCTTCTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS TCA 72 bp | GAGAGGACGCCGCAATCTCTCGACAGCAGCTGGCAATaGACCTGGCCTGGGCCAGGTATCCACGGAGGATGG | + |
Preference number: 6 (lower is better) Translates to: ERTPQSLDSSWQ*TWPGPGIHGGW Trigger: CCATCCTCCGTGGATACCTGGCCCAGGCCAGGTTCATTGCCAGCTGCTGTCGAGAGATTGCGGCGTCCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | CAGCACTATTGTCAGAGTCTGGCTCGGAGTGCCTGCTaGAGGGCGAGGGGGCATGGAGCTCTGGATGAGCCT | + |
Preference number: 6 (lower is better) Translates to: QHYCQSLARSAC*RARGHGALDEP Trigger: AGGCTCATCCAGAGCTCCATGCCCCCTCGCCCTGCAGCAGGCACTCCGAGCCAGACTCTGACAATAGTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 72 bp | CACCAGCACTATTGTCAGAGTCTGGCTCGGAGTGCCTaGTGCAGGGCGAGGGGGCATGGAGCTCTGGATGAG | + |
Preference number: 6 (lower is better) Translates to: HQHYCQSLARSA*CRARGHGALDE Trigger: CTCATCCAGAGCTCCATGCCCCCTCGCCCTGCAGCAGGCACTCCGAGCCAGACTCTGACAATAGTGCTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | GGTCCTAATGGCAGCCTCTCTCCTCTCTTCAGAGCATaGGGCAGGGGGTTGGGAGCTACCCTCCTCACCAGC | + |
Preference number: 6 (lower is better) Translates to: GPNGSLSPLFRA*GRGLGATLLTS Trigger: GCTGGTGAGGAGGGTAGCTCCCAACCCCCTGCCCCATGCTCTGAAGAGAGGAGAGAGGCTGCCATTAGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | AGGCCCGGCAGGCTGGGAGACCTGGAGTCTGGGACTTaGCTGCGTACAAGCTTCGAACGAGCTAGGTGTCCC | + |
Preference number: 6 (lower is better) Translates to: RPGRLGDLESGT*LRTSFERARCP Trigger: GGGACACCTAGCTCGTTCGAAGCTTGTACGCAGCAAAGTCCCAGACTCCAGGTCTCCCAGCCTGCCGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 90 bp | ACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTTGGAGATGCTCTaGTTCCTCACACGGGGCCACCTTGGGCAGGTCCTCTGGGGACTG | + |
Preference number: 6 (lower is better) Translates to: TQLLSQALHGSLEML*FLTRGHLGQVLWGL Trigger: CAGTCCCCAGAGGACCTGCCCAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 90 bp | CTCCTGCAGTGCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTaGGAGATGCTCTTGTTCCTCACACGGGGCCACCTTGGGCAGGTC | + |
Preference number: 6 (lower is better) Translates to: LLQCTQLLSQALHGS*EMLLFLTRGHLGQV Trigger: GACCTGCCCAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGCACTGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | GCTTCAACTTCCTCCCTCAAAGCCTGCTCCTGCTCCTaGCTCCCCTTCTCGCCTTCCCTGGCTGTCTCCAAC | + |
Preference number: 6 (lower is better) Translates to: ASTSSLKACSCS*LPFSPSLAVSN Trigger: GTTGGAGACAGCCAGGGAAGGCGAGAAGGGGAGGCAGGAGCAGGAGCAGGCTTTGAGGGAGGAAGTTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | GGCTGCCTGGAGCACAGTCGCTGCCTCATCCAGAGCTaGTTCTCTTTTCTTGCGCCTGTGGGCCTTCCACTG | + |
Preference number: 6 (lower is better) Translates to: GCLEHSRCLIQS*FSFLAPVGLPL Trigger: CAGTGGAAGGCCCACAGGCGCAAGAAAAGAGAAGCAGCTCTGGATGAGGCAGCGACTGTGCTCCAGGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS TCA 72 bp | TGCTGCGTACAAGCTTCGAACGAGCTAGGTGTCCCCTaGAGGCTGCCTGGAGCACAGTCGCTGCCTCATCCA | + |
Preference number: 6 (lower is better) Translates to: CCVQASNELGVP*RLPGAQSLPHP Trigger: TGGATGAGGCAGCGACTGTGCTCCAGGCAGCCTTCAGGGGACACCTAGCTCGTTCGAAGCTTGTACGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | CCTCTGCCTCATCTTCGTCCTTCGCAGCCTCCCCACTaGTCGCCTCGCTGTTCTTTCCTGATGGACCCCATT | + |
Preference number: 6 (lower is better) Translates to: PLPHLRPSQPPH*SPRCSFLMDPI Trigger: AATGGGGTCCATCAGGAAAGAACAGCGAGGCGAGCAGTGGGGAGGCTGCGAAGGACGAAGATGAGGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CCA 72 bp | TTGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTaGTTCTCCTCGGTCAGCTCCTGCACACTCCGTGTT | + |
Preference number: 6 (lower is better) Translates to: LLSMRSRSSFRL*FSSVSSCTLRV Trigger: AACACGGAGTGTGCAGGAGCTGACCGAGGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 72 bp | GCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTTaGAGATGCTCTTGTTCCTCACACGGGGCCACCTTG | + |
Preference number: 6 (lower is better) Translates to: APSSSLRLFTVP*RCSCSSHGATL Trigger: CAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 72 bp | GCCTCTCTCCTCTCTTCAGAGCATGGGGCAGGGGGTTaGGAGCTACCCTCCTCACCAGCACTATTGTCAGAG | + |
Preference number: 6 (lower is better) Translates to: ASLLSSEHGAGG*ELPSSPALLSE Trigger: CTCTGACAATAGTGCTGGTGAGGAGGGTAGCTCCCAACCCCCTGCCCCATGCTCTGAAGAGAGGAGAGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | GCCTCATCCAGAGCTGCTTCTCTTTTCTTGCGCCTGTaGGCCTTCCACTGCGCCTGCAGGGTCCTAATGGCA | + |
Preference number: 6 (lower is better) Translates to: ASSRAASLFLRL*AFHCACRVLMA Trigger: TGCCATTAGGACCCTGCAGGCGCAGTGGAAGGCCCACAGGCGCAAGAAAAGAGAAGCAGCTCTGGATGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | AGCTTCGAACGAGCTAGGTGTCCCCTGAAGGCTGCCTaGAGCACAGTCGCTGCCTCATCCAGAGCTGCTTCT | + |
Preference number: 6 (lower is better) Translates to: SFERARCPLKAA*STVAASSRAAS Trigger: AGAAGCAGCTCTGGATGAGGCAGCGACTGTGCTCCAGGCAGCCTTCAGGGGACACCTAGCTCGTTCGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 72 bp | CTCTCTCAGGCTCTTCACGGTTCCTTGGAGATGCTCTaGTTCCTCACACGGGGCCACCTTGGGCAGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: LSQALHGSLEML*FLTRGHLGQVL Trigger: GAGGACCTGCCCAAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | TCTCTTTTCTTGCGCCTGTGGGCCTTCCACTGCGCCTaGAGGGTCCTAATGGCAGCCTCTCTCCTCTCTTCA | + |
Preference number: 6 (lower is better) Translates to: SLFLRLWAFHCA*RVLMAASLLSS Trigger: TGAAGAGAGGAGAGAGGCTGCCATTAGGACCCTGCAGGCGCAGTGGAAGGCCCACAGGCGCAAGAAAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | GCAATCTCTCGACAGCAGCTGGCAATGAACCTGGCCTaGGCCAGGTATCCACGGAGGATGGACTGGATAACG | + |
Preference number: 6 (lower is better) Translates to: AISRQQLAMNLA*ARYPRRMDWIT Trigger: CGTTATCCAGTCCATCCTCCGTGGATACCTGGCCCAGGCCAGGTTCATTGCCAGCTGCTGTCGAGAGATTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 72 bp | TGCACCCAGCTCCTCTCTCAGGCTCTTCACGGTTCCTaGGAGATGCTCTTGTTCCTCACACGGGGCCACCTT | + |
Preference number: 6 (lower is better) Translates to: CTQLLSQALHGS*EMLLFLTRGHL Trigger: AAGGTGGCCCCGTGTGAGGAACAAGAGCATCTCCAAGGAACCGTGAAGAGCCTGAGAGAGGAGCTGGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS GCA 72 bp | ATCCCAGCCACAGCTTCTGTGGGGTCAAGGACATTCTaGTACTCAGAGGCATGCTCCCTGCCGTCTTCAGAG | + |
Preference number: 6 (lower is better) Translates to: IPATASVGSRTF*YSEACSLPSSE Trigger: CTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACCCCACAGAAGCTGTGGCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS CCA 72 bp | AACCTGGCCTGGGCCAGGTATCCACGGAGGATGGACTaGATAACGATGACAGCCTCCTCTTGTGTTGGGTTC | + |
Preference number: 6 (lower is better) Translates to: NLAWARYPRRMD*ITMTASSCVGF Trigger: GAACCCAACACAAGAGGAGGCTGTCATCGTTATCCAGTCCATCCTCCGTGGATACCTGGCCCAGGCCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 72 bp | TGCTGCTCCTTTCCTCACACATGGCATCCTTCATACTaGGCACAGCCTCCAGACTGGATGAGGACGGGCAGT | + |
Preference number: 6 (lower is better) Translates to: CCSFPHTWHPSY*AQPPDWMRTGS Trigger: ACTGCCCGTCCTCATCCAGTCTGGAGGCTGTGCCCAGTATGAAGGATGCCATGTGTGAGGAAAGGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 72 bp | TCCTTGCATTGCTGCTCCAGCCTGAAGATCCTTTGTTaGAGCCCGGTGATGACCCAGCCCGTGTCAGGCTTC | + |
Preference number: 6 (lower is better) Translates to: SLHCCSSLKILC*SPVMTQPVSGF Trigger: GAAGCCTGACACGGGCTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | CTTCTCCTTGCATTGCTGCTCCAGCCTGAAGATCCTTaGTTTGAGCCCGGTGATGACCCAGCCCGTGTCAGG | + |
Preference number: 6 (lower is better) Translates to: LLLALLLQPEDP*FEPGDDPARVR Trigger: CCTGACACGGGCTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 90 bp | TTGTCCTTCTCCTTGCATTGCTGCTCCAGCCTGAAGATCCTTTGTTaGAGCCCGGTGATGACCCAGCCCGTGTCAGGCTTCTTCTCTGCC | + |
Preference number: 6 (lower is better) Translates to: LSFSLHCCSSLKILC*SPVMTQPVSGFFSA Trigger: GGCAGAGAAGAAGCCTGACACGGGCTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 90 bp | TTCTCGCCTTCCCTGGCTGTCTCCAACTCCTTCTCCAGGTCGATCTaGGACTGTAGCAGCTGCTTCATCTCCAGGTCTTTCTCCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: FSPSLAVSNSFSRSI*DCSSCFISRSFSSS Trigger: GCTGCTGGAGAAAGACCTGGAGATGAAGCAGCTGCTACAGTCCAAGATCGACCTGGAGAAGGAGTTGGAGACAGCCAGGGAAGGCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS TCA 72 bp | GCAGATCCTGAGGGTGTCAATGAAACAGTTTCCCTCTaGGAGGACGCCGCAATCTCTCGACAGCAGCTGGCA | + |
Preference number: 6 (lower is better) Translates to: ADPEGVNETVSL*EDAAISRQQLA Trigger: TGCCAGCTGCTGTCGAGAGATTGCGGCGTCCTCTCAGAGGGAAACTGTTTCATTGACACCCTCAGGATCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 90 bp | AGTGTTGTCCTTCTCCTTGCATTGCTGCTCCAGCCTGAAGATCCTTaGTTTGAGCCCGGTGATGACCCAGCCCGTGTCAGGCTTCTTCTC | + |
Preference number: 6 (lower is better) Translates to: SVVLLLALLLQPEDP*FEPGDDPARVRLLL Trigger: GAGAAGAAGCCTGACACGGGCTGGGTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS TCA 72 bp | CCAGTCCCCGTAACCCTTTATTTTGGAGATGGTGGGTaGATTGCTCAGCATGCGGTCCAGGTCCTCCTTCAG | + |
Preference number: 6 (lower is better) Translates to: PVPVTLYFGDGG*IAQHAVQVLLQ Trigger: CTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 72 bp | GGTCAAGGACATTCTGCTACTCAGAGGCATGCTCCCTaGCGTCTTCAGAGATCGCCAGGAGGTCACTTTTCT | + |
Preference number: 6 (lower is better) Translates to: GQGHSATQRHAP*RLQRSPGGHFS Trigger: AGAAAAGTGACCTCCTGGCGATCTCTGAAGACGGCAGGGAGCATGCCTCTGAGTAGCAGAATGTCCTTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS GCA 72 bp | TCTGGGCCTCGACTTGGATCCAGAAGCTGTTCTATCTaGCGATCCTTTCTGCTGTTCTCCTCTTCCAAGCGC | + |
Preference number: 6 (lower is better) Translates to: SGPRLGSRSCSI*RSFLLFSSSKR Trigger: GCGCTTGGAAGAGGAGAACAGCAGAAAGGATCGGCAGATAGAACAGCTTCTGGATCCAAGTCGAGGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 72 bp | CCCCGTAACCCTTTATTTTGGAGATGGTGGGTGAATTaGTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: PRNPLFWRWWVN*SACGPGPPSGS Trigger: AGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 72 bp | AACTCCTTCTCCAGGTCGATCTTGGACTGTAGCAGCTaGTTCATCTCCAGGTCTTTCTCCAGCAGCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: NSFSRSILDCSS*FISRSFSSSCS Trigger: GGAGCAGCTGCTGGAGAAAGACCTGGAGATGAAGCAGCTGCTACAGTCCAAGATCGACCTGGAGAAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CCA 72 bp | TGCTCCAGTCCCCGTAACCCTTTATTTTGGAGATGGTaGGTGAATTGCTCAGCATGCGGTCCAGGTCCTCCT | + |
Preference number: 6 (lower is better) Translates to: CSSPRNPLFWRW*VNCSACGPGPP Trigger: AGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGGACTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | GCTTGCTCCAGTCCCCGTAACCCTTTATTTTGGAGATaGTGGGTGAATTGCTCAGCATGCGGTCCAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: ACSSPRNPLFWR*WVNCSACGPGP Trigger: AGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGGTTACGGGGACTGGAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | TCTCTGCCAAGGTTCGCACGAAGTCTGGGCCTCGACTaGGATCCAGAAGCTGTTCTATCTGCCGATCCTTTC | + |
Preference number: 6 (lower is better) Translates to: SLPRFARSLGLD*DPEAVLSADPF Trigger: GAAAGGATCGGCAGATAGAACAGCTTCTGGATCCAAGTCGAGGCCCAGACTTCGTGCGAACCTTGGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | TCCCTGGCTGTCTCCAACTCCTTCTCCAGGTCGATCTaGGACTGTAGCAGCTGCTTCATCTCCAGGTCTTTC | + |
Preference number: 6 (lower is better) Translates to: SLAVSNSFSRSI*DCSSCFISRSF Trigger: GAAAGACCTGGAGATGAAGCAGCTGCTACAGTCCAAGATCGACCTGGAGAAGGAGTTGGAGACAGCCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000129704.2 |
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CDS CAA 90 bp | CAGGCTTCTTCTCTGCCAAGGTTCGCACGAAGTCTGGGCCTCGACTaGGATCCAGAAGCTGTTCTATCTGCCGATCCTTTCTGCTGTTCT | + |
Preference number: 6 (lower is better) Translates to: QASSLPRFARSLGLD*DPEAVLSADPFCCS Trigger: AGAACAGCAGAAAGGATCGGCAGATAGAACAGCTTCTGGATCCAAGTCGAGGCCCAGACTTCGTGCGAACCTTGGCAGAGAAGAAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 90 bp | GGGCTTTCTGAGGAACTCACCTTTATTTTGGAGATGGTGGGTGAATaGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCTGGTTCTCC | + |
Preference number: 6 (lower is better) Translates to: GLSEELTFILEMVGE*LSMRSRSSFRLWFS Trigger: GGAGAACCAGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CAA 72 bp | GAGGAACTCACCTTTATTTTGGAGATGGTGGGTGAATaGCTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTC | + |
Preference number: 6 (lower is better) Translates to: EELTFILEMVGE*LSMRSRSSFRL Trigger: GAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CAA 90 bp | AGCGGACCAGGGGATTCGGATTCACCAGCTCTGAAGTCGATTGCTTaGGGCTTTCTGAGGAACTCACTTTCTTTTCTAGCTCTGCGATGC | + |
Preference number: 6 (lower is better) Translates to: SGPGDSDSPALKSIA*GFLRNSLSFLALRC Trigger: GCATCGCAGAGCTAGAAAAGAAAGTGAGTTCCTCAGAAAGCCCAAAGCAATCGACTTCAGAGCTGGTGAATCCGAATCCCCTGGTCCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 90 bp | AGCGGACCAGGGGATTCGGATTCACCAGCTCTGAAGTCGATTGCTTaGGGCTTTCTGAGGAACTCACCTTTATTTTGGAGATGGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: SGPGDSDSPALKSIA*GFLRNSPLFWRWWV Trigger: CACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCCCAAAGCAATCGACTTCAGAGCTGGTGAATCCGAATCCCCTGGTCCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS TCA 72 bp | CTTCCTGGGCAGAAATGGCGAAAAGATAATGTCATCTaGGTCATCCGAGCAGATGTCCTCCACAGGTGGTGG | + |
Preference number: 6 (lower is better) Translates to: LPGQKWRKDNVI*VIRADVLHRWW Trigger: CCACCACCTGTGGAGGACATCTGCTCGGATGACTCAGATGACATTATCTTTTCGCCATTTCTGCCCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS GCA 72 bp | AGGAACTCACCTTTATTTTGGAGATGGTGGGTGAATTaGTCAGCATGCGGTCCAGGTCCTCCTTCAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: RNSPLFWRWWVN*SACGPGPPSGS Trigger: AGAGCCTGAAGGAGGACCTGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CCA 72 bp | TCTTCAGAGATCGCCAGGAGGTCACTTTTCTGGGTTTaGAGTAGTAGGGCGACTTTGGTGATGTGGAAGGAG | + |
Preference number: 6 (lower is better) Translates to: SSEIARRSLFWV*SSRATLVMWKE Trigger: CTCCTTCCACATCACCAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTGACCTCCTGGCGATCTCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS CAA 90 bp | CATGTCCGTCTGCAGTTTGTTGATAGTGTTGTCCTTCTCCTTGCATaGCTGCTCCAGCCTGAAGATCCTTTGTTTGAGCCCGGTGATGAC | + |
Preference number: 6 (lower is better) Translates to: HVRLQFVDSVVLLLA*LLQPEDPLFEPGDD Trigger: GTCATCACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 90 bp | GTCTTCATGTCCGTCTGCAGTTTGTTGATAGTGTTGTCCTTCTCCTaGCATTGCTGCTCCAGCCTGAAGATCCTTTGTTTGAGCCCGGTG | + |
Preference number: 6 (lower is better) Translates to: VFMSVCSLLIVLSFS*HCCSSLKILCLSPV Trigger: CACCGGGCTCAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGACATGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | TCTGCAGACGATGGATCTCTTCGTAGTATGTTTCCATaGCAATGCGCATCTCCTCCAGGTTGGTGGTCTTCA | + |
Preference number: 6 (lower is better) Translates to: SADDGSLRSMFP*QCASPPGWWSS Trigger: TGAAGACCACCAACCTGGAGGAGATGCGCATTGCCATGGAAACATACTACGAAGAGATCCATCGTCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | GTGGTCTTCATGTCCGTCTGCAGTTTGTTGATAGTGTaGTCCTTCTCCTTGCATTGCTGCTCCAGCCTGAAG | + |
Preference number: 6 (lower is better) Translates to: VVFMSVCSLLIV*SFSLHCCSSLK Trigger: CTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGACATGAAGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | GATTGCTTTGGGCTTTCTGAGGAACTCACCTTTATTTaGGAGATGGTGGGTGAATTGCTCAGCATGCGGTCC | + |
Preference number: 6 (lower is better) Translates to: DCFGLSEELTFI*EMVGELLSMRS Trigger: GGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCCCAAAGCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CAA 90 bp | TCTGCCGATCCTTTCTGCTGTTCTCCTCTTCCAAGCGCCGAAGCTTaGTTCTCATCAGATCCACATCACTTTTCTGCATATGTAAGGACT | + |
Preference number: 6 (lower is better) Translates to: SADPFCCSPLPSAEA*FSSDPHHFSAYVRT Trigger: AGTCCTTACATATGCAGAAAAGTGATGTGGATCTGATGAGAACAAAGCTTCGGCGCTTGGAAGAGGAGAACAGCAGAAAGGATCGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000142081.6 |
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CDS GCA 72 bp | ACCAGGGGATTCGGATTCACCAGCTCTGAAGTCGATTaGTTTGGGCTTTCTGAGGAACTCACTTTCTTTTCT | + |
Preference number: 6 (lower is better) Translates to: TRGFGFTSSEVD*FGLSEELTFFS Trigger: AGAAAAGAAAGTGAGTTCCTCAGAAAGCCCAAAGCAATCGACTTCAGAGCTGGTGAATCCGAATCCCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CCA 72 bp | ATTGCTTTGGGCTTTCTGAGGAACTCACCTTTATTTTaGAGATGGTGGGTGAATTGCTCAGCATGCGGTCCA | + |
Preference number: 6 (lower is better) Translates to: IALGFLRNSPLF*RWWVNCSACGP Trigger: TGGACCGCATGCTGAGCAATTCACCCACCATCTCCAAAATAAAGGTGAGTTCCTCAGAAAGCCCAAAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129704.2 |
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CDS CAA 72 bp | AGGTCACTTTTCTGGGTTTGGAGTAGTAGGGCGACTTaGGTGATGTGGAAGGAGGTTTGTGGAAACTTTTCC | + |
Preference number: 6 (lower is better) Translates to: RSLFWVWSSRAT*VMWKEVCGNFS Trigger: GGAAAAGTTTCCACAAACCTCCTTCCACATCACCAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |
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CDS CAA 72 bp | TCCGTCTGCAGTTTGTTGATAGTGTTGTCCTTCTCCTaGCATTGCTGCTCCAGCCTGAAGATCCTTTGTTTG | + |
Preference number: 6 (lower is better) Translates to: SVCSLLIVLSFS*HCCSSLKILCL Trigger: CAAACAAAGGATCTTCAGGCTGGAGCAGCAATGCAAGGAGAAGGACAACACTATCAACAAACTGCAGACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 |
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CDS CAA 72 bp | CCTTTCTGCTGTTCTCCTCTTCCAAGCGCCGAAGCTTaGTTCTCATCAGATCCACATCACTTTTCTGCATAT | + |
Preference number: 6 (lower is better) Translates to: PFCCSPLPSAEA*FSSDPHHFSAY Trigger: ATATGCAGAAAAGTGATGTGGATCTGATGAGAACAAAGCTTCGGCGCTTGGAAGAGGAGAACAGCAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000142081.6 |
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CDS TCA 72 bp | CACTTTTCTGGGTTTGGAGTAGTAGGGCGACTTTGGTaGTGTGGAAGGAGGTTTGTGGAAACTTTTCCTTTT | + |
Preference number: 6 (lower is better) Translates to: HFSGFGVVGRLW*CGRRFVETFPF Trigger: AAAAGGAAAAGTTTCCACAAACCTCCTTCCACATCACCAAAGTCGCCCTACTACTCCAAACCCAGAAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041783.14 ENSMUST00000077890.12 ENSMUST00000135028.5 ENSMUST00000142081.6 |