Pregenerated sensors for IQCC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040795Ensembl transcript IDs: ENSMUST00000046675.12, ENSMUST00000121442.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGGGACGAAGTCTCTGGGGCCATGCCTCACCCGAGGACACCCATaGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SGTKSLGPCLTRGHP*QPSKQDGEPAVSRA Trigger: AGCCCTGGAGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGAGGCATGGCCCCAGAGACTTCGTCCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 90 bp | ATGCCTCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTaGGCCAGCCGTCTCCAGGGCTTGCCCACACAGCTCCTCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: MPHPRTPMAAEQARR*ASRLQGLPTQLLLH Trigger: ATGCAGGAGGAGCTGTGTGGGCAAGCCCTGGAGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGAGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 90 bp | TGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTCCAGGGCTTaGCCACACAGCTCCTCCTGCATGGCAGCCAAGAATCCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: WQPSKQDGEPAVSRA*PHSSSCMAAKNPRK Trigger: TTTCCTTGGATTCTTGGCTGCCATGCAGGAGGAGCTGTGTGGGCAAGCCCTGGAGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 90 bp | ACATCAGCAGCCAGAAGCAATTCTGGGACGAAGTCTCTGGGGCCATaGCTCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGT | + |
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Preference number: 1 (lower is better) Translates to: TSAARSNSGTKSLGP*LTRGHPWQPSKQDG Trigger: ACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGAGGCATGGCCCCAGAGACTTCGTCCCAGAATTGCTTCTGGCTGCTGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 90 bp | GTGGGGTGGCTGTCACTGGGAAGTGATCAGAGCAGCTATAGGCAGTaGGGGTCTCCCAGTGTCCACTCACACCAAGTCACGTGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: VGWLSLGSDQSSYRQ*GSPSVHSHQVTCVR Trigger: CCTCACACACGTGACTTGGTGTGAGTGGACACTGGGAGACCCTCACTGCCTATAGCTGCTCTGATCACTTCCCAGTGACAGCCACCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 90 bp | GCAAGGGCAGGAGACAGGTGGTACCAGGGAGGCAGGACAAGGGCCTaGTTCCCTTGTCATTTTTCACAGCATCTGCTTTTGGGAACCCTT | + |
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Preference number: 1 (lower is better) Translates to: ARAGDRWYQGGRTRA*FPCHFSQHLLLGTL Trigger: AAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCACCTGTCTCCTGCCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 90 bp | GACGGTGAGCCAGCCGTCTCCAGGGCTTGCCCACACAGCTCCTCCTaGATGGCAGCCAAGAATCCAAGGAAAACTTTTATTCTCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: DGEPAVSRACPHSSS*MAAKNPRKTFILQD Trigger: ATCCTGGAGAATAAAAGTTTTCCTTGGATTCTTGGCTGCCATGCAGGAGGAGCTGTGTGGGCAAGCCCTGGAGACGGCTGGCTCACCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 90 bp | CACCAAGTCACGTGTGTGAGGAGTGTGGCAATGACAGACACGATGTaGCACATCAGCAGCCAGAAGCAATTCTGGGACGAAGTCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: HQVTCVRSVAMTDTM*HISSQKQFWDEVSG Trigger: CCCAGAGACTTCGTCCCAGAATTGCTTCTGGCTGCTGATGTGCCACATCGTGTCTGTCATTGCCACACTCCTCACACACGTGACTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGAAATGTTTT | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLPSAGIKGVKCF Trigger: AAAACATTTCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 90 bp | CTCCAGGATCCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTaGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGTCCTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LQDPPTLLTPRGGEI*FKSQAEGKKACPSF Trigger: GAAAGAAGGACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGGATCCTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 90 bp | CTGTGGCTTCATCCTTGGACCTGGCCTAGGATGAATGGTTTTCCTTaGTCACAAATCTGTCCAAAGCCCATTTCTCTTTTTCCCACCACC | + |
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Preference number: 1 (lower is better) Translates to: LWLHPWTWPRMNGFP*SQICPKPISLFPTT Trigger: GGTGGTGGGAAAAAGAGAAATGGGCTTTGGACAGATTTGTGATCAAGGAAAACCATTCATCCTAGGCCAGGTCCAAGGATGAAGCCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CCA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTAGGGCAGGAGACAGGTaGTACCAGGGAGGCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SPEDTHGSRASKTVSQPSRAGDR*YQGGRT Trigger: TGTCCTGCCTCCCTGGTACCACCTGTCTCCTGCCCT...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGACCCGAGGACACCCATaGCAGCCGAGCAAGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PMALLYPSAHLWLHPWTWTRGHP*QPSKQD Trigger: GTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGT...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CCA 90 bp | GTCCACTCACACCAAGTCACGTGTGTGAGGAGTGTGGCAATGACAGACACGATGCTGGGACGAAGTCTCTaGGGCCATGCCTCACCCGAG | + |
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Preference number: 2 (lower is better) Translates to: VHSHQVTCVRSVAMTDTMLGRSL*GHASPE Trigger: CTCGGGTGAGGCATGGCCCCAGAGACTTCGTCCCAG...CATCGTGTCTGTCATTGCCACACTCCTCACACACGTGACTTGGTGTGAGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGAGCCAGAAGCAATTCTaGGACGAAGTCTCTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PMALLYPSAHLWLHPWTWSQKQF*DEVSGA Trigger: GGCCCCAGAGACTTCGTCCCAGAATTGCTTCTGGCT...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAACCCCTAGTCCTGTCTTaGGGAAGACAAGTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IFMLICTTFAQWGGCHWEPLVLS*GRQVLQ Trigger: CTGGAGAACTTGTCTTCCTCAAGACAGGACTAGGGG...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCCACCACCCCCAGGATAGCCAGGGCTACACAGAGAAACAAGACAGGGTTGGCAGGACAAGGGCCTaGTTCCCTTGTCATTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FSHHPQDSQGYTEKQDRVGRTRA*FPCHFS Trigger: TGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCC...AACCCTGTCTTGTTTCTCTGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAAGAACCCTTCCTCTCCTaGATCCCCAGATCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IFMLICTTFAQWGGCHWEEPFLS*IPRSFL Trigger: CAGGAAAGATCTGGGGATCCAGGAGAGGAAGGGTTC...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CAA 90 bp | TTCTACAAGCTCATTATAAGTTCAAAGCAACAGTTTCCCATGGCCTaGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: FYKLIISSKQQFPMA*LYPSAHLWLHPWTW Trigger: CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGGAAACTGTTGCTTTGAACTTATAATGAGCTTGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 72 bp | CCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTaGGCCAGCCGTCTCCAGGGCTTGCCCACACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PRTPMAAEQARR*ASRLQGLPTQL Trigger: GAGCTGTGTGGGCAAGCCCTGGAGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | AAGTCTCTGGGGCCATGCCTCACCCGAGGACACCCATaGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTC | + |
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Preference number: 3 (lower is better) Translates to: KSLGPCLTRGHP*QPSKQDGEPAV Trigger: GACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGAGGCATGGCCCCAGAGACTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 72 bp | GCCAGAAGCAATTCTGGGACGAAGTCTCTGGGGCCATaGCTCACCCGAGGACACCCATGGCAGCCGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: ARSNSGTKSLGP*LTRGHPWQPSK Trigger: CTTGCTCGGCTGCCATGGGTGTCCTCGGGTGAGGCATGGCCCCAGAGACTTCGTCCCAGAATTGCTTCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | CATCAGCAGCCAGAAGCAATTCTGGGACGAAGTCTCTaGGGCCATGCCTCACCCGAGGACACCCATGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: HQQPEAILGRSL*GHASPEDTHGS Trigger: GCTGCCATGGGTGTCCTCGGGTGAGGCATGGCCCCAGAGACTTCGTCCCAGAATTGCTTCTGGCTGCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CAA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTTCACAGCATCTGCTTTaGGGAACCCTTCCTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SPEDTHGSRASKTVSQPSSQHLL*GTLPLL Trigger: CAGGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGA...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 72 bp | CTGTCACTGGGAAGTGATCAGAGCAGCTATAGGCAGTaGGGGTCTCCCAGTGTCCACTCACACCAAGTCACG | + |
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Preference number: 3 (lower is better) Translates to: LSLGSDQSSYRQ*GSPSVHSHQVT Trigger: CGTGACTTGGTGTGAGTGGACACTGGGAGACCCTCACTGCCTATAGCTGCTCTGATCACTTCCCAGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 72 bp | TGCAAGCATCTGGGGAGGTTGAGGCAGGAAATCCGTTaGGTTCAAGGCCAGCCCGGACTACCTAGTAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: CKHLGRLRQEIR*VQGQPGLPSKA Trigger: AGCCTTACTAGGTAGTCCGGGCTGGCCTTGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGATGCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| 3UTR GCA 72 bp | GGAGACAGGTGGTACCAGGGAGGCAGGACAAGGGCCTaGTTCCCTTGTCATTTTTCACAGCATCTGCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: GDRWYQGGRTRA*FPCHFSQHLLL Trigger: CAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCACCTGTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGTACCAGGGAGGCAGGACAAGGGCCTGCTTCCCTTGTCATTTTTCACTCCCCTAGTCCTGTCTaGAGGAAGACAAGTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TGGTREAGQGPASLVIFHSPSPV*RKTSSP Trigger: TGGAGAACTTGTCTTCCTCAAGACAGGACTAGGGGA...GTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | ACGTGTGTGAGGAGTGTGGCAATGACAGACACGATGTaGCACATCAGCAGCCAGAAGCAATTCTGGGACGAA | + |
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Preference number: 3 (lower is better) Translates to: TCVRSVAMTDTM*HISSQKQFWDE Trigger: TTCGTCCCAGAATTGCTTCTGGCTGCTGATGTGCCACATCGTGTCTGTCATTGCCACACTCCTCACACACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | CTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTaGCTGTCACTGGGAAGTGATCAGAGCAGCTATAGG | + |
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Preference number: 3 (lower is better) Translates to: LHVDLHDICPVG*LSLGSDQSSYR Trigger: CCTATAGCTGCTCTGATCACTTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | TTTCACAGCATCTGCTTTTGGGAACCCTTCCTCTCCTaGATCCCCAGATCTTTCCTGATGCTCCTGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FHSICFWEPFLS*IPRSFLMLLLS Trigger: GGAAAGCAGGAGCATCAGGAAAGATCTGGGGATCCAGGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | TTCATCTTCATGTTGATCTGCACGACATTTGCCCAGTaGGGTGGCTGTCACTGGGAAGTGATCAGAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FIFMLICTTFAQ*GGCHWEVIRAA Trigger: AGCTGCTCTGATCACTTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | TTTCCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTaGCTTCATCCTTGGACCTGGCCTAGGATGAATGGT | + |
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Preference number: 3 (lower is better) Translates to: FPMALLYPSAHL*LHPWTWPRMNG Trigger: ACCATTCATCCTAGGCCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 72 bp | GTAGTATACATCTTTAATGCAAGCATCTGGGGAGGTTaGGGCAGGAAATCCGTTGAGTTCAAGGCCAGCCCG | + |
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Preference number: 3 (lower is better) Translates to: VVYIFNASIWGG*GRKSVEFKASP Trigger: CGGGCTGGCCTTGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGATGCTTGCATTAAAGATGTATACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| 3UTR GCA 72 bp | CCTAGTAAGGCTCTGTGTCTACAGACTTTTGGAGCTTaGCGGAGAGATGGCTCAGCAGTTAAAGGAACTCGT | + |
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Preference number: 3 (lower is better) Translates to: PSKALCLQTFGA*RRDGSAVKGTR Trigger: ACGAGTTCCTTTAACTGCTGAGCCATCTCTCCGGCAAGCTCCAAAAGTCTGTAGACACAGAGCCTTACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| 3UTR TCA 72 bp | CTCACCTGTGGCTTCATCCTTGGACCTGGCCTAGGATaGATGGTTTTCCTTGATCACAAATCTGTCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LTCGFILGPGLG*MVFLDHKSVQS Trigger: GCTTTGGACAGATTTGTGATCAAGGAAAACCATTCATCCTAGGCCAGGTCCAAGGATGAAGCCACAGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR CCA 72 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTaGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGT | + |
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Preference number: 3 (lower is better) Translates to: PPTLLTPRGGEI*FKSQAEGKKAC Trigger: ACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CAA 90 bp | CACAAATGGAGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTGCTTCGTTCAGTTTCCCATGGCCTaGCTTTATCCTAGTGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: HKWSYRRMLIVSSKQCFVQFPMA*LYPSAH Trigger: GTGAGCACTAGGATAAAGCAAGGCCATGGGAAACTG...AACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACTCCATTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR-3UTR CAA 90 bp | CACAAATGGAGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTGCTTCGTTAAGGGCCTGCTTCCCTaGTCATTTTTCACAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: HKWSYRRMLIVSSKQCFVKGLLP*SFFTAS Trigger: AGATGCTGTGAAAAATGACAAGGGAAGCAGGCCCTT...AACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACTCCATTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR TCA 72 bp | CATCCTTGGACCTGGCCTAGGATGAATGGTTTTCCTTaGTCACAAATCTGTCCAAAGCCCATTTCTCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: HPWTWPRMNGFP*SQICPKPISLF Trigger: AAAAAGAGAAATGGGCTTTGGACAGATTTGTGATCAAGGAAAACCATTCATCCTAGGCCAGGTCCAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| 3UTR GCA 72 bp | AGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTaGTTCGTTCTACAAGCTCATTATAAGTTCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SYRRMLIVSSKQ*FVLQAHYKFKA Trigger: TGCTTTGAACTTATAATGAGCTTGTAGAACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR GCA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTTCTGGGGCTTCAATCTaGCCTTGTGGCTGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPEDTHGSRASKTVSQPSSGASI*PCGWSP Trigger: AGGACTCCAGCCACAAGGGCAGATTGAAGCCCCAGA...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR GCA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTAGGCTACCTTGTTCCTaGCCTGCCAAGGTCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: SPEDTHGSRASKTVSQPSRLPCS*PAKVSS Trigger: GGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCT...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CCA 90 bp | TCTGGGGAGGTTGAGGCAGGAAATCCGTTGAGTTCAAGGCCAGCCCGGACTACCGGGGGTGCCAGGCTCTaGGAGAAATACGGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SGEVEAGNPLSSRPARTTGGARL*EKYGLG Trigger: CCCAAGCCCGTATTTCTCCCAGAGCCTGGCACCCCC...GGTAGTCCGGGCTGGCCTTGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGCCCATTTCTCTTTTTCCCACCACCCCCAGGATAGCCAGGGCTACACACTGCCCTGCTCAGCCTaGGGCCAGGCGCTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: SKAHFSFSHHPQDSQGYTLPCSA*GQALSS Trigger: AGATGACAGCGCCTGGCCGCAGGCTGAGCAGGGCAG...TGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAAAGAGAAATGGGCTTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR GCA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTACCTTGTTCCTGCCCTaGCAAGGTCTCATCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SPEDTHGSRASKTVSQPSTLFLP*QGLIPN Trigger: ATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGT...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CCA 90 bp | TCTCTTAGCCTGAGATCTACTGATGGCCAGGGGCAAGGGCAGGAGACAGGTGGTCTGTCCTCCGTGGTCTaGCCCTTTGGTGACCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLSLRSTDGQGQGQETGGLSSVV*PFGDPV Trigger: GACAGGGTCACCAAAGGGCCAGACCACGGAGGACAG...ACCACCTGTCTCCTGCCCTTGCCCCTGGCCATCAGTAGATCTCAGGCTAAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGCTGTCCCCTCCAGCCTaGCTCTCTAATGCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PMALLYPSAHLWLHPWTWLSPPA*LSNAAG Trigger: GCCTGCAGCATTAGAGAGCCAGGCTGGAGGGGACAG...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CCA 90 bp | TCTCTTAGCCTGAGATCTACTGATGGCCAGGGGCAAGGGCAGGAGACAGGTGGTCCAGCACTCGGGGGTTaGCTCTTGGGTGGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLRSTDGQGQGQETGGPALGG*LLGGLV Trigger: GACTAAACCACCCAAGAGCCAACCCCCGAGTGCTGG...ACCACCTGTCTCCTGCCCTTGCCCCTGGCCATCAGTAGATCTCAGGCTAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCCCAGTGTCCACTCACACCAAGTCACGTGTGTGAGGAGTGTGGCAATGTCCTGGAGCTCCTGTTaGCTCTGGGACAATCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVHSHQVTCVRSVAMSWSSC*LWDNPR Trigger: CCTAGGATTGTCCCAGAGCCAACAGGAGCTCCAGGA...CATTGCCACACTCCTCACACACGTGACTTGGTGTGAGTGGACACTGGGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGTACCAGGGAGGCAGGACAAGGGCCTGCTTCCCTTGTCATTTTTCACGCCACAGCAGCTCCATaGCTAAGTGGTTGCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGTREAGQGPASLVIFHATAAP*LSGCAA Trigger: AGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGC...GTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCACCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCACCACCCCCAGGATAGCCAGGGCTACACAGAGAAACAAGACAGGGTTAAGGGCTGTCCTCCGTaGTCTGGCCCTTTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FSHHPQDSQGYTEKQDRVKGCPP*SGPLVT Trigger: GGTCACCAAAGGGCCAGACCACGGAGGACAGCCCTT...AACCCTGTCTTGTTTCTCTGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCAGGCTGTTTCCCTGGCTaGCTTTCCTGCCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPTLLTPRGGEIWFKSQAGCFPG*LSCPAQ Trigger: CTGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCC...TGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGTCACTGGGAAGTGATCAGAGCAGCTATAGGCAGTGAGGGTCTCCCATGCTTGTCTCTGGTCTaGCTTGCTTCTGGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGCHWEVIRAAIGSEGLPCLSLV*LASGDL Trigger: GAGATCCCCAGAAGCAAGCCAGACCAGAGACAAGCA...TGGGAGACCCTCACTGCCTATAGCTGCTCTGATCACTTCCCAGTGACAGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | TCTCTTAGCCTGAGATCTACTGATGGCCAGGGGCAAGGGCAGGAGACAGGTGGTGGTCTGGCTTGCTTCTaGGGATCTCAGTGTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLRSTDGQGQGQETGGGLACF*GSQCLL Trigger: AAGCAAACACTGAGATCCCCAGAAGCAAGCCAGACC...ACCACCTGTCTCCTGCCCTTGCCCCTGGCCATCAGTAGATCTCAGGCTAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| 3UTR CAA 72 bp | GTGGTACCAGGGAGGCAGGACAAGGGCCTGCTTCCCTaGTCATTTTTCACAGCATCTGCTTTTGGGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPGRQDKGLLP*SFFTASAFGNP Trigger: AGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR TCA 90 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCACGAAGGCTCTGGAATTaGCGTCGGACCAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTLLTPRGGEIWFKSQARRLWN*RRTKKP Trigger: AGGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCG...TGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR TCA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAACTGGAGTCCTCTGCATaGTGGGACTCTCCTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: IFMLICTTFAQWGGCHWELESSA*WDSPMI Trigger: GATCATAGGAGAGTCCCATCATGCAGAGGACTCCAG...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGTACCAGGGAGGCAGGACAAGGGCCTGCTTCCCTTGTCATTTTTCACAGGCGCTGTCATCTCTaGAAAGACTTCCTGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGGTREAGQGPASLVIFHRRCHL*KDFLDL Trigger: CAAATCCAGGAAGTCTTTGCAGAGATGACAGCGCCT...GTGAAAAATGACAAGGGAAGCAGGCCCTTGTCCTGCCTCCCTGGTACCACCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAAGTCTCTGGTCTGGCTTaGTTCTGGGGATCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFMLICTTFAQWGGCHWEVSGLA*FWGSQC Trigger: ACACTGAGATCCCCAGAAGCAAGCCAGACCAGAGAC...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | ACATCTTTAATGCAAGCATCTGGGGAGGTTGAGGCAGGAAATCCGTTGAGTTCAGGAGAAATACGGGCTTaGGGATCCAGCCCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLMQASGEVEAGNPLSSGEIRA*GSSPQS Trigger: GGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTCC...TGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGATGCTTGCATTAAAGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
||
| CDS-3UTR CCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGATGAGATTTTGCCTCTaGGAGAAATACGGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PMALLYPSAHLWLHPWTWMRFCL*EKYGLG Trigger: CCCAAGCCCGTATTTCTCCCAGAGGCAAAATCTCAT...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAACCCAGCGCTTCGGCTTaGCTTTCTGGAATATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFMLICTTFAQWGGCHWEPSASA*LSGISV Trigger: GACAGATATTCCAGAAAGCCAAGCCGAAGCGCTGGG...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGTCCTTCTGGAGAAATACGGGCTTaGGGATCCAGCCCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEIWFKSQAEGKKACPSGEIRA*GSSPQS Trigger: GGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTCC...AGAAGGACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGTCCTTCTTGGTTGCGCTGCTCCTaGAGCTCCTGTTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEIWFKSQAEGKKACPSWLRCS*SSCWLW Trigger: CCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCA...AGAAGGACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCACCACCCCCAGGATAGCCAGGGCTACACAGAGAAACAAGACAGGGTTGGGTTGGCTCTTGGGTaGTTTAGTCCTAATGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FSHHPQDSQGYTEKQDRVGLALG*FSPNEI Trigger: GATCTCATTAGGACTAAACCACCCAAGAGCCAACCC...AACCCTGTCTTGTTTCTCTGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | TATACATCTTTAATGCAAGCATCTGGGGAGGTTGAGGCAGGAAATCCGTTGAGTTCCTCTTTGGACCTCTaGGGGTGCCAGGCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTSLMQASGEVEAGNPLSSSLDL*GCQALG Trigger: TCCCAGAGCCTGGCACCCCCAGAGGTCCAAAGAGGA...ACTCAACGGATTTCCTGCCTCAACCTCCCCAGATGCTTGCATTAAAGATGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
||
| 3UTR CAA 72 bp | CCGGACTACCTAGTAAGGCTCTGTGTCTACAGACTTTaGGAGCTTGCCGGAGAGATGGCTCAGCAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDYLVRLCVYRL*ELAGEMAQQLK Trigger: CTTTAACTGCTGAGCCATCTCTCCGGCAAGCTCCAAAAGTCTGTAGACACAGAGCCTTACTAGGTAGTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTTTAATGCAAGCATCTGGGGAGGTTGAGGCAGGAAATCCGTTGAGTTCACGAAGGCTCTGGAATTaGCGTCGGACCAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLMQASGEVEAGNPLSSRRLWN*RRTKKP Trigger: AGGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCG...TGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGATGCTTGCATTAAAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
||
| CDS-3UTR GCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGTTTTCTGTCTTCTTCTaGACCATCTCCTCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PMALLYPSAHLWLHPWTWFSVFF*TISSQM Trigger: CATTTGGGAGGAGATGGTGCAGAAGAAGACAGAAAA...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | CCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTAGTGGCTGGAGTCCTCTaGATGATGGGACTCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PYLPQEEVKFGLSPRQKVVAGVL*MMGLSY Trigger: ATAGGAGAGTCCCATCATGCAGAGGACTCCAGCCAC...TACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCCCAGTGTCCACTCACACCAAGTCACGTGTGTGAGGAGTGTGGCAATGTTCGGCTTGGCTTTCTaGAATATCTGTCCTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVHSHQVTCVRSVAMFGLAF*NICPQY Trigger: ATATTGAGGACAGATATTCCAGAAAGCCAAGCCGAA...CATTGCCACACTCCTCACACACGTGACTTGGTGTGAGTGGACACTGGGAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| 3UTR CAA 72 bp | GCCTGCTTCCCTTGTCATTTTTCACAGCATCTGCTTTaGGGAACCCTTCCTCTCCTGGATCCCCAGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACFPCHFSQHLL*GTLPLLDPQIF Trigger: AAAGATCTGGGGATCCAGGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR TCA 90 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCAGATGGGACTCTCCTATaGTCCTGTCTCTATAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PPTLLTPRGGEIWFKSQADGTLL*SCLYRI Trigger: AATCCTATAGAGACAGGATCATAGGAGAGTCCCATC...TGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGTGGCTCCATAGTTTCTaGTCTGGGTTTGATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMALLYPSAHLWLHPWTWWLHSF*SGFDIF Trigger: GAAAATATCAAACCCAGAGCAGAAACTATGGAGCCA...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCACTGCATTTTCCATCTTaGAGACAGAGGTATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPTLLTPRGGEIWFKSQALHFPS*RQRYLG Trigger: GCCAAGATACCTCTGTCTCCAAGATGGAAAATGCAG...TGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCTTGTCATTTTTCACAGCATCTGCTTTTGGGAACCCTTCCTCTCCTGGTTTTACCTGCACTaGTCACACTGTCTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PASLVIFHSICFWEPFLSWFYLH*SHCLGV Trigger: AACACCCAGACAGTGTGACCAGTGCAGGTAAAACCA...GGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGCCCATTTCTCTTTTTCCCACCACCCCCAGGATAGCCAGGGCTACACAATCTCAGTGTTTGCTTaGGAATTAGGTACTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAHFSFSHHPQDSQGYTISVFA*ELGTPF Trigger: GAAAGGAGTACCTAATTCTCAAGCAAACACTGAGAT...TGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAAAGAGAAATGGGCTTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CACAAATGGAGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTGCTTCGTTTCTTGGCTGTTTCCCTaGCTGGCTTTCCTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKWSYRRMLIVSSKQCFVSWLFP*LAFLPC Trigger: GCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGA...AACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACTCCATTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCTTGTCATTTTTCACAGCATCTGCTTTTGGGAACCCTTCCTCTCCACTTCCTGGATTTGCTaGGCTCTTTTCTGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PASLVIFHSICFWEPFLSTSWIC*ALFCLL Trigger: AAGAAGACAGAAAAGAGCCCAGCAAATCCAGGAAGT...GGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCCTTGTCATTTTTCACAGCATCTGCTTTTGGGAACCCTTCCTCTCCGTTTTTCCATCCTTCTaGACTAAGCTCACTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PASLVIFHSICFWEPFLSVFPSF*TKLTGI Trigger: AATACCAGTGAGCTTAGTCCAGAAGGATGGAAAAAC...GGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGTCCTTCTGGGGATCTCAGTGTTTaGTTGAGAATTAGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEIWFKSQAEGKKACPSGDLSV*LRIRYS Trigger: GGAGTACCTAATTCTCAAGCAAACACTGAGATCCCC...AGAAGGACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| 3UTR CAA 72 bp | CTCATTATAAGTTCAAAGCAACAGTTTCCCATGGCCTaGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIISSKQQFPMA*LYPSAHLWLHP Trigger: AGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGGAAACTGTTGCTTTGAACTTATAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR GCA 90 bp | CACAAATGGAGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTGCTTCGTTGGACTGATGAGATTTTaGCTCTGGGAGAAATACGGG | + |
|
Preference number: 4 (lower is better) Translates to: HKWSYRRMLIVSSKQCFVGLMRF*LWEKYG Trigger: CCCGTATTTCTCCCAGAGGCAAAATCTCATCAGTCC...AACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACTCCATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CCA 90 bp | CCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTATCATCCCAAATCATGTaGCCTTCTAAGATATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PYLPQEEVKFGLSPRQKVSSQIM*PSKIFK Trigger: TTTGAATATCTTAGAAGGCCACATGATTTGGGATGA...TACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CAA 90 bp | TCACCCGAGGACACCCATGGCAGCCGAGCAAGCAAGACGGTGAGCCAGCCGTCTGGCTTCAATCTGCCCTaGTGGCTGGAGTCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPEDTHGSRASKTVSQPSGFNLP*WLESSA Trigger: TGCAGAGGACTCCAGCCACAAGGGCAGATTGAAGCC...AGACGGCTGGCTCACCGTCTTGCTTGCTCGGCTGCCATGGGTGTCCTCGGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS GCA 90 bp | GAGACAGAGGTATCTTGGCTGTTTCCCTGGCTGGCTTTCCTGCCCTaGTCAGCCTGCGGCCAGGCGCTGTCATCTCTGCAAAGACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETEVSWLFPWLAFLP*SACGQALSSLQRLP Trigger: AGGAAGTCTTTGCAGAGATGACAGCGCCTGGCCGCAGGCTGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS GCA 90 bp | TCTTGGAGACAGAGGTATCTTGGCTGTTTCCCTGGCTGGCTTTCCTaGCCTGCTCAGCCTGCGGCCAGGCGCTGTCATCTCTGCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWRQRYLGCFPGWLS*PAQPAARRCHLCKD Trigger: GTCTTTGCAGAGATGACAGCGCCTGGCCGCAGGCTGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTCCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS GCA 90 bp | ATGGCCTGCTGTAGCCACAGCAGCTCCATGGCTAAGTGGTTGCGCTaGTCCTGGAGCTCCTGTTGGCTCTGGGACAATCCTAGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MACCSHSSSMAKWLR*SWSSCWLWDNPRSA Trigger: TGCAGACCTAGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCAGGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 90 bp | CGACTGTTGATGGCCTGCTGTAGCCACAGCAGCTCCATGGCTAAGTaGTTGCGCTGCTCCTGGAGCTCCTGTTGGCTCTGGGACAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLMACCSHSSSMAK*LRCSWSSCWLWDNP Trigger: AGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCAGGCCATCAACAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 90 bp | TCTGCATTTTCCATCTTGGAGACAGAGGTATCTTGGCTGTTTCCCTaGCTGGCTTTCCTGCCCTGCTCAGCCTGCGGCCAGGCGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAFSILETEVSWLFP*LAFLPCSACGQALS Trigger: TGACAGCGCCTGGCCGCAGGCTGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTCCAAGATGGAAAATGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 90 bp | ACTTTCAACTGCTGTAGGGAGGTTTCCTTAAAGGGCTGTCCTCCGTaGTCTGGCCCTTTGGTGACCCTGTCCCCTCCAGCCTGGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFNCCREVSLKGCPP*SGPLVTLSPPAWLS Trigger: AGAGAGCCAGGCTGGAGGGGACAGGGTCACCAAAGGGCCAGACCACGGAGGACAGCCCTTTAAGGAAACCTCCCTACAGCAGTTGAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CAA 90 bp | TCTCTTAGCCTGAGATCTACTGATGGCCAGGGGCAAGGGCAGGAGACAGGTGGTGGAGACAGAGGTATCTaGGCTGTTTCCCTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLRSTDGQGQGQETGGGDRGI*AVSLAG Trigger: GCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTCC...ACCACCTGTCTCCTGCCCTTGCCCCTGGCCATCAGTAGATCTCAGGCTAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 90 bp | TGCTGTAGCCACAGCAGCTCCATGGCTAAGTGGTTGCGCTGCTCCTaGAGCTCCTGTTGGCTCTGGGACAATCCTAGGTCTGCATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCSHSSSMAKWLRCS*SSCWLWDNPRSAFS Trigger: GGAAAATGCAGACCTAGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | CCTCCCACCCTACTTACCCCAAGAGGAGGTGAAATTTGGTTTAAGTCCCAGGCAGCCAGCACTCGGGGGTaGGCTCTTGGGTGGTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPTLLTPRGGEIWFKSQAASTRG*ALGWFS Trigger: ACTAAACCACCCAAGAGCCAACCCCCGAGTGCTGGC...TGCCTGGGACTTAAACCAAATTTCACCTCCTCTTGGGGTAAGTAGGGTGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS TCA 90 bp | GAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTaGGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIRAWGSSPQSTEEC*GHPQSLVQLPHTRL Trigger: GAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGGATCCCCAAGCCCGTATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS CCA 90 bp | AGCAGCTCCATGGCTAAGTGGTTGCGCTGCTCCTGGAGCTCCTGTTaGCTCTGGGACAATCCTAGGTCTGCATTTTCCATCTTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSMAKWLRCSWSSC*LWDNPRSAFSILET Trigger: TGTCTCCAAGATGGAAAATGCAGACCTAGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CCA 90 bp | CCACGGTTTTTCCATCCTTCTGGACTAAGCTCACTGGTATTTCCATaGCCCGAAGAGCCAGCACTCGGGGGTTGGCTCTTGGGTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRFFHPSGLSSLVFP*PEEPALGGWLLGGL Trigger: TAAACCACCCAAGAGCCAACCCCCGAGTGCTGGCTCTTCGGGCCATGGAAATACCAGTGAGCTTAGTCCAGAAGGATGGAAAAACCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | TTTTCCCACCACCCCCAGGATAGCCAGGGCTACACAGAGAAACAAGACAGGGTTTCGAAGGCTCTGGAATaGACGTCGGACCAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSHHPQDSQGYTEKQDRVSKALE*TSDQEA Trigger: GGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCGA...AACCCTGTCTTGTTTCTCTGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | AGGAAATCCGTTGAGTTCAAGGCCAGCCCGGACTACCTAGTAAGGCTCTGTGTCTCGAAGGCTCTGGAATaGACGTCGGACCAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKSVEFKASPDYLVRLCVSKALE*TSDQEA Trigger: GGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCGA...GACACAGAGCCTTACTAGGTAGTCCGGGCTGGCCTTGAACTCAACGGATTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTCCCTTGTCATTTTTCACAGCATCTGCTTTTGGGAACCCTTCCTCTCCGCCTGTCCCCTGTGCTaGTCTCTGGTCTGGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PASLVIFHSICFWEPFLSACPLC*SLVWLA Trigger: AGCAAGCCAGACCAGAGACAAGCACAGGGGACAGGC...GGAGAGGAAGGGTTCCCAAAAGCAGATGCTGTGAAAAATGACAAGGGAAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | TCTGGGGAGGTTGAGGCAGGAAATCCGTTGAGTTCAAGGCCAGCCCGGACTACCCAATCTCTTGTACAATaGCCTCATACTCGGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGEVEAGNPLSSRPARTTQSLVQ*PHTRLE Trigger: TTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTG...GGTAGTCCGGGCTGGCCTTGAACTCAACGGATTTCCTGCCTCAACCTCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| CDS CCA 90 bp | AGGCTACCTTGTTCCTGCCCTGCCAAGGTCTCATCCCAAATCATGTaGCCTTCTAAGATATTCAAATCACAGGGCCCAGCGCTTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLPCSCPAKVSSQIM*PSKIFKSQGPALRL Trigger: AAGCCGAAGCGCTGGGCCCTGTGATTTGAATATCTTAGAAGGCCACATGATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | GGTGGCTGTCACTGGGAAGTGATCAGAGCAGCTATAGGCAGTGAGGGTCTCCCAGTCACCCTCAATCTCTaGTACAATTGCCTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: GGCHWEVIRAAIGSEGLPVTLNL*YNCLIL Trigger: GAGTATGAGGCAATTGTACAAGAGATTGAGGGTGAC...TGGGAGACCCTCACTGCCTATAGCTGCTCTGATCACTTCCCAGTGACAGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CAA 90 bp | TCTCTTAGCCTGAGATCTACTGATGGCCAGGGGCAAGGGCAGGAGACAGGTGGTAAAGACTTCCTGGATTaGCTGGGCTCTTTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLRSTDGQGQGQETGGKDFLD*LGSFLS Trigger: AGACAGAAAAGAGCCCAGCAAATCCAGGAAGTCTTT...ACCACCTGTCTCCTGCCCTTGCCCCTGGCCATCAGTAGATCTCAGGCTAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS TCA 90 bp | ATCTGCCCTTGTGGCTGGAGTCCTCTGCATGATGGGACTCTCCTATaGTCCTGTCTCTATAGGATTGGTTGTCCAGAACGCAGCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICPCGWSPLHDGTLL*SCLYRIGCPERSLS Trigger: ACTCAAGCTGCGTTCTGGACAACCAATCCTATAGAGACAGGATCATAGGAGAGTCCCATCATGCAGAGGACTCCAGCCACAAGGGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 90 bp | AGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTaGCTCATACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLKSAEVTLNLLYN*LILGSKALELTSDQ Trigger: TTGGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS GCA 90 bp | TGGGTGTTTCTGGGGCTTCAATCTGCCCTTGTGGCTGGAGTCCTCTaGATGATGGGACTCTCCTATGATCCTGTCTCTATAGGATTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WVFLGLQSALVAGVL*MMGLSYDPVSIGLV Trigger: AACCAATCCTATAGAGACAGGATCATAGGAGAGTCCCATCATGCAGAGGACTCCAGCCACAAGGGCAGATTGAAGCCCCAGAAACACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | TCCAAAGCCCATTTCTCTTTTTCCCACCACCCCCAGGATAGCCAGGGCTACACATCTGCATTTTCCATCTaGGAGACAGAGGTATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKAHFSFSHHPQDSQGYTSAFSI*ETEVSW Trigger: CCAAGATACCTCTGTCTCCAAGATGGAAAATGCAGA...TGTGTAGCCCTGGCTATCCTGGGGGTGGTGGGAAAAAGAGAAATGGGCTTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 90 bp | CTCTTGGGTGGTTTAGTCCTAATGAGATCCAGGCTACCTTGTTCCTaGCCTGCCAAGGTCTCATCCCAAATCATGTGGCCTTCTAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLGGLVLMRSRLPCS*PAKVSSQIMWPSKI Trigger: TATCTTAGAAGGCCACATGATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCTGGATCTCATTAGGACTAAACCACCCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS-3UTR CAA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAACAATCTCTTGTACAATaGCCTCATACTCGGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IFMLICTTFAQWGGCHWEQSLVQ*PHTRLE Trigger: TTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTG...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | CCCATGGCCTTGCTTTATCCTAGTGCTCACCTGTGGCTTCATCCTTGGACCTGGTCTGTCCTCAATATTTaGATTTTCAGAGAGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PMALLYPSAHLWLHPWTWSVLNI*IFRESG Trigger: CCCACTCTCTCTGAAAATCAAAATATTGAGGACAGA...CCAGGTCCAAGGATGAAGCCACAGGTGAGCACTAGGATAAAGCAAGGCCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | CACAAATGGAGTTACAGAAGGATGTTGATAGTCAGTTCAAAGCAGTGCTTCGTTGAGATCCAGGCTACCTaGTTCCTGCCCTGCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HKWSYRRMLIVSSKQCFVEIQAT*FLPCQG Trigger: ACCTTGGCAGGGCAGGAACAAGGTAGCCTGGATCTC...AACGAAGCACTGCTTTGAACTGACTATCAACATCCTTCTGTAACTCCATTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | ATCTTCATGTTGATCTGCACGACATTTGCCCAGTGGGGTGGCTGTCACTGGGAAGATCTCAGTGTTTGCTaGAGAATTAGGTACTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFMLICTTFAQWGGCHWEDLSVC*RIRYSF Trigger: AAAGGAGTACCTAATTCTCAAGCAAACACTGAGATC...TTCCCAGTGACAGCCACCCCACTGGGCAAATGTCGTGCAGATCAACATGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS TCA 90 bp | CCAGCGCTTCGGCTTGGCTTTCTGGAATATCTGTCCTCAATATTTTaGTTTTCAGAGAGAGTGGGCAGCTGTGTTTCAGCCTTTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PALRLGFLEYLSSIF*FSERVGSCVSAFLE Trigger: TTCTAGAAAGGCTGAAACACAGCTGCCCACTCTCTCTGAAAATCAAAATATTGAGGACAGATATTCCAGAAAGCCAAGCCGAAGCGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS-3UTR CAA 90 bp | GGAGGTGAAATTTGGTTTAAGTCCCAGGCAGAAGGTAAAAAGGCATGTCCTTCTGTTTCTGCTCTGGGTTaGATATTTTCTCTGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEIWFKSQAEGKKACPSVSALG*IFSLLS Trigger: GGAAAGCAGAGAAAATATCAAACCCAGAGCAGAAAC...AGAAGGACATGCCTTTTTACCTTCTGCCTGGGACTTAAACCAAATTTCACCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | GTATCTTGGCTGTTTCCCTGGCTGGCTTTCCTGCCCTaGTCAGCCTGCGGCCAGGCGCTGTCATCTCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VSWLFPWLAFLP*SACGQALSSLQ Trigger: TTGCAGAGATGACAGCGCCTGGCCGCAGGCTGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | CCTGCTGTAGCCACAGCAGCTCCATGGCTAAGTGGTTaGGCTGCTCCTGGAGCTCCTGTTGGCTCTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PAVATAAPWLSG*AAPGAPVGSGT Trigger: TGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CCA 72 bp | ATGGCCTGCTGTAGCCACAGCAGCTCCATGGCTAAGTaGTTGCGCTGCTCCTGGAGCTCCTGTTGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MACCSHSSSMAK*LRCSWSSCWLW Trigger: CCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCAGGCCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CCA 72 bp | TGCTGTAGGGAGGTTTCCTTAAAGGGCTGTCCTCCGTaGTCTGGCCCTTTGGTGACCCTGTCCCCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CCREVSLKGCPP*SGPLVTLSPPA Trigger: GGCTGGAGGGGACAGGGTCACCAAAGGGCCAGACCACGGAGGACAGCCCTTTAAGGAAACCTCCCTACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 90 bp | TGTAGGGAGGTTTCCTTAAAGGGCTGTCCTCCGTGGTCTGGCCCTTaGGTGACCCTGTCCCCTCCAGCCTGGCTCTCTAATGCTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CREVSLKGCPPWSGP*VTLSPPAWLSNAAG Trigger: GCCTGCAGCATTAGAGAGCCAGGCTGGAGGGGACAGGGTCACCAAAGGGCCAGACCACGGAGGACAGCCCTTTAAGGAAACCTCCCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS TCA 72 bp | ACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTaGCGTCGGACCAAGAAGCCTCGGAAGCCGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TIASYSARRLWN*RRTKKPRKPAC Trigger: GCAGGCCGGCTTCCGAGGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS GCA 72 bp | TGCCCTGCTCAGCCTGCGGCCAGGCGCTGTCATCTCTaGAAAGACTTCCTGGATTTGCTGGGCTCTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CPAQPAARRCHL*KDFLDLLGSFL Trigger: CAGAAAAGAGCCCAGCAAATCCAGGAAGTCTTTGCAGAGATGACAGCGCCTGGCCGCAGGCTGAGCAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | TGTAGCCACAGCAGCTCCATGGCTAAGTGGTTGCGCTaGTCCTGGAGCTCCTGTTGGCTCTGGGACAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSHSSSMAKWLR*SWSSCWLWDNP Trigger: AGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCATGGAGCTGCTGTGGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | CCATGGCCCGAAGAGCCAGCACTCGGGGGTTGGCTCTaGGGTGGTTTAGTCCTAATGAGATCCAGGCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: PWPEEPALGGWL*GGLVLMRSRLP Trigger: AGGTAGCCTGGATCTCATTAGGACTAAACCACCCAAGAGCCAACCCCCGAGTGCTGGCTCTTCGGGCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CCA 72 bp | GCCCGAAGAGCCAGCACTCGGGGGTTGGCTCTTGGGTaGTTTAGTCCTAATGAGATCCAGGCTACCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARRASTRGLALG*FSPNEIQATLF Trigger: GAACAAGGTAGCCTGGATCTCATTAGGACTAAACCACCCAAGAGCCAACCCCCGAGTGCTGGCTCTTCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | TACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATaGACGTCGGACCAAGAAGCCTCGGAAGCCGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: YNCLILGSKALE*TSDQEASEAGL Trigger: CAGGCCGGCTTCCGAGGCTTCTTGGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS GCA 72 bp | TGGTCACACTGTCTGGGTGTTTCTGGGGCTTCAATCTaGCCTTGTGGCTGGAGTCCTCTGCATGATGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WSHCLGVSGASI*PCGWSPLHDGT Trigger: AGTCCCATCATGCAGAGGACTCCAGCCACAAGGGCAGATTGAAGCCCCAGAAACACCCAGACAGTGTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | GGTATTTCCATGGCCCGAAGAGCCAGCACTCGGGGGTaGGCTCTTGGGTGGTTTAGTCCTAATGAGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GISMARRASTRG*ALGWFSPNEIQ Trigger: CTGGATCTCATTAGGACTAAACCACCCAAGAGCCAACCCCCGAGTGCTGGCTCTTCGGGCCATGGAAATACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 90 bp | CCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTaGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACG | + |
|
Preference number: 6 (lower is better) Translates to: PAPSPLKSAEVTLNL*YNCLILGSKALELT Trigger: CGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS CAA 90 bp | GGTTCACAGTTGTTAACTCCAGTTCCAGAGGGTCTAATGTCCTCTTaGGACCTCTGGGGGTGCCAGGCTCTGGGAGAAATACGGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSQLLTPVPEGLMSS*DLWGCQALGEIRAW Trigger: CCAAGCCCGTATTTCTCCCAGAGCCTGGCACCCCCAGAGGTCCAAAGAGGACATTAGACCCTCTGGAACTGGAGTTAACAACTGTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121442.2 |
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| CDS TCA 72 bp | GCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTaGGGTCACCCTCAATCTCTTGTACAATTGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AWGSSPQSTEEC*GHPQSLVQLPH Trigger: ATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGGATCCCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS TCA 72 bp | AGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTaGAGAGTGCTGAGGTCACCCTCAATCTCTTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: RNTGLGIQPPVH*RVLRSPSISCT Trigger: TGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGGATCCCCAAGCCCGTATTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS CCA 72 bp | ATGGCTAAGTGGTTGCGCTGCTCCTGGAGCTCCTGTTaGCTCTGGGACAATCCTAGGTCTGCATTTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: MAKWLRCSWSSC*LWDNPRSAFSI Trigger: GATGGAAAATGCAGACCTAGGATTGTCCCAGAGCCAACAGGAGCTCCAGGAGCAGCGCAACCACTTAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 72 bp | GTTTTACCTGCACTGGTCACACTGTCTGGGTGTTTCTaGGGCTTCAATCTGCCCTTGTGGCTGGAGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLPALVTLSGCF*GFNLPLWLESS Trigger: AGAGGACTCCAGCCACAAGGGCAGATTGAAGCCCCAGAAACACCCAGACAGTGTGACCAGTGCAGGTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 90 bp | GGGTTGGCTCTTGGGTGGTTTAGTCCTAATGAGATCCAGGCTACCTaGTTCCTGCCCTGCCAAGGTCTCATCCCAAATCATGTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLALGWFSPNEIQAT*FLPCQGLIPNHVAF Trigger: GAAGGCCACATGATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCTGGATCTCATTAGGACTAAACCACCCAAGAGCCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS GCA 72 bp | CTGGGGCTTCAATCTGCCCTTGTGGCTGGAGTCCTCTaGATGATGGGACTCTCCTATGATCCTGTCTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: LGLQSALVAGVL*MMGLSYDPVSI Trigger: TATAGAGACAGGATCATAGGAGAGTCCCATCATGCAGAGGACTCCAGCCACAAGGGCAGATTGAAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CCA 72 bp | AGGTCTGCATTTTCCATCTTGGAGACAGAGGTATCTTaGCTGTTTCCCTGGCTGGCTTTCCTGCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSAFSILETEVS*LFPWLAFLPCS Trigger: TGAGCAGGGCAGGAAAGCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTCCAAGATGGAAAATGCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CAA 90 bp | AGCTCCTGTTGGCTCTGGGACAATCCTAGGTCTGCATTTTCCATCTaGGAGACAGAGGTATCTTGGCTGTTTCCCTGGCTGGCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSCWLWDNPRSAFSI*ETEVSWLFPWLAFL Trigger: CAGGAAAGCCAGCCAGGGAAACAGCCAAGATACCTCTGTCTCCAAGATGGAAAATGCAGACCTAGGATTGTCCCAGAGCCAACAGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS CAA 90 bp | GGGGATCTCAGTGTTTGCTTGAGAATTAGGTACTCCTTTCGACTGTaGATGGCCTGCTGTAGCCACAGCAGCTCCATGGCTAAGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GDLSVCLRIRYSFRL*MACCSHSSSMAKWL Trigger: CAACCACTTAGCCATGGAGCTGCTGTGGCTACAGCAGGCCATCAACAGTCGAAAGGAGTACCTAATTCTCAAGCAAACACTGAGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
||
| CDS TCA 72 bp | TGTGGCTGGAGTCCTCTGCATGATGGGACTCTCCTATaGTCCTGTCTCTATAGGATTGGTTGTCCAGAACGC | + |
|
Preference number: 6 (lower is better) Translates to: CGWSPLHDGTLL*SCLYRIGCPER Trigger: GCGTTCTGGACAACCAATCCTATAGAGACAGGATCATAGGAGAGTCCCATCATGCAGAGGACTCCAGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | CCAGGCGCTGTCATCTCTGCAAAGACTTCCTGGATTTaGTGGGCTCTTTTCTGTCTTCTTCTGCACCATCTC | + |
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Preference number: 6 (lower is better) Translates to: PGAVISAKTSWI*WALFCLLLHHL Trigger: GAGATGGTGCAGAAGAAGACAGAAAAGAGCCCAGCAAATCCAGGAAGTCTTTGCAGAGATGACAGCGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | GGTTTAGTCCTAATGAGATCCAGGCTACCTTGTTCCTaGCCTGCCAAGGTCTCATCCCAAATCATGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GLVLMRSRLPCS*PAKVSSQIMWP Trigger: AGGCCACATGATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCTGGATCTCATTAGGACTAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CCA 72 bp | TGTTCCTGCCCTGCCAAGGTCTCATCCCAAATCATGTaGCCTTCTAAGATATTCAAATCACAGGGCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CSCPAKVSSQIM*PSKIFKSQGPA Trigger: CGCTGGGCCCTGTGATTTGAATATCTTAGAAGGCCACATGATTTGGGATGAGACCTTGGCAGGGCAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | AGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTaGTACAATTGCCTCATACTCGGCTCGAAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPLKSAEVTLNL*YNCLILGSKAL Trigger: CAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS GCA 72 bp | AAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTaGCTCATACTCGGCTCGAAGGCTCTGGAATTGACG | + |
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Preference number: 6 (lower is better) Translates to: KSAEVTLNLLYN*LILGSKALELT Trigger: CGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046675.12 ENSMUST00000121442.2 |
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| CDS CCA 72 bp | TCGCCACTGCAGAATTCCACGGTTTTTCCATCCTTCTaGACTAAGCTCACTGGTATTTCCATGGCCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPLQNSTVFPSF*TKLTGISMARR Trigger: TCTTCGGGCCATGGAAATACCAGTGAGCTTAGTCCAGAAGGATGGAAAAACCGTGGAATTCTGCAGTGGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | AGTGTTTGCTTGAGAATTAGGTACTCCTTTCGACTGTaGATGGCCTGCTGTAGCCACAGCAGCTCCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVCLRIRYSFRL*MACCSHSSSMA Trigger: AGCCATGGAGCTGCTGTGGCTACAGCAGGCCATCAACAGTCGAAAGGAGTACCTAATTCTCAAGCAAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | CTGGTCTGGCTTGCTTCTGGGGATCTCAGTGTTTGCTaGAGAATTAGGTACTCCTTTCGACTGTTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVWLASGDLSVC*RIRYSFRLLMA Trigger: GGCCATCAACAGTCGAAAGGAGTACCTAATTCTCAAGCAAACACTGAGATCCCCAGAAGCAAGCCAGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 72 bp | CTTGGGTGGTTTAGTCCTAATGAGATCCAGGCTACCTaGTTCCTGCCCTGCCAAGGTCTCATCCCAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: LGWFSPNEIQAT*FLPCQGLIPNH Trigger: ATGATTTGGGATGAGACCTTGGCAGGGCAGGAACAAGGTAGCCTGGATCTCATTAGGACTAAACCACCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS GCA 72 bp | TCAGAGTCTTTATGTGGGGAATGGCTCCATAGTTTCTaGTCTGGGTTTGATATTTTCTCTGCTTTCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SESLCGEWLHSF*SGFDIFSAFQD Trigger: GTCCTGGAAAGCAGAGAAAATATCAAACCCAGAGCAGAAACTATGGAGCCATTCCCCACATAAAGACTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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| CDS CAA 90 bp | TGTGGCCTTCTAAGATATTCAAATCACAGGGCCCAGCGCTTCGGCTaGGCTTTCTGGAATATCTGTCCTCAATATTTTGATTTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: CGLLRYSNHRAQRFG*AFWNICPQYFDFQR Trigger: TCTCTGAAAATCAAAATATTGAGGACAGATATTCCAGAAAGCCAAGCCGAAGCGCTGGGCCCTGTGATTTGAATATCTTAGAAGGCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046675.12 |
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