Pregenerated sensors for IQCB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022837Ensembl transcript IDs: ENSMUST00000023535.4, ENSMUST00000114819.8
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTATGCCAGGCAAGCAGCAACTTGGAAACAGCAGAGCTGTTTATAGTCAGGACTTTGCTTCCAAGTGTTaGATGAAGATGATGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SMPGKQQLGNSRAVYSQDFASKC*MKMMLW Trigger: CCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA...GTCCTGACTATAAACAGCTCTGCTGTTTCCAAGTTGCTGCTTGCCTGGCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| 3UTR CAA 90 bp | GGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTaGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GIETGERIESEVGNA*LFASKCCMKMMLWK Trigger: TTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCAATGCTTTGCTTTTTaGTTCCAAGTGTTGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: FASKCCMKMMLWKATGIAQCFAF*FQVLHE Trigger: TTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG...GGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGTAAGATTGCCAGCTTTCACAGTACTCTCTAGGGAGGTTTGGTTCCACCGAGAGGTAGGCAATGCTTaGCTTTTTGCTTCCAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KVRLPAFTVLSREVWFHREVGNA*LFASKC Trigger: ACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTC...TCGGTGGAACCAAACCTCCCTAGAGAGTACTGTGAAAGCTGGCAATCTTACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTTGCTTTTTGCTTCCAAGTGTCAGGCAAGCAGCAACTaGGAAACAGCAGAGCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GERIESEVGNALLFASKCQASSN*ETAELF Trigger: AAACAGCTCTGCTGTTTCCAAGTTGCTGCTTGCCTG...ACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| 3UTR CCA 72 bp | CTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTaGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LFASKCCMKMML*KATGIALVFLH Trigger: ATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| 3UTR CCA 72 bp | AACTATGAAGGTAGGTTTCTAGTGAAGTTACAGATGTaGGTGATAGCAACAACCCCAATCCCTGGCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: NYEGRFLVKLQM*VIATTPIPGNF Trigger: GAAGTTGCCAGGGATTGGGGTTGTTGCTATCACCCACATCTGTAACTTCACTAGAAACCTACCTTCATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | AAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGAGTGCATGGAGCTCTCTaGTGGCCGCCTCTGACATCT | + |
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Preference number: 4 (lower is better) Translates to: KMMLWKATGIALVFLHARVHGAL*WPPLTS Trigger: AGATGTCAGAGGCGGCCAGCAGAGAGCTCCATGCAC...TCTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | CACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTCTTGTGCTTGTGCATaGAGCTCTCTGCTGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HRQGIETGERIESEVGNASCACA*SSLLAA Trigger: GGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGA...AGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGTGCCTCCTTCAGACTTaGTGCCTTCATCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDDALESHWHSPSLPACQCLLQT*CLHQLF Trigger: GAACAGCTGATGAAGGCACCAAGTCTGAAGGAGGCA...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023535.4 |
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| CDS-3UTR TCA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGACTGAAGCTCCTATCTaGACATTGTCAGTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDDALESHWHSPSLPACQTEAPI*TLSVCS Trigger: GCTGCAAACTGACAATGTTCAGATAGGAGCTTCAGT...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTTGCTTTCGTTCTTGTGCTTGTaGATGGAGCTCTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIETGERIESEVGNALLSFLCL*MELSAG Trigger: GCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGA...AAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CCCACAATTAAAGCTCACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTCTCTGCGTGCATCAGTaGGTTCTTGAAGTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: PTIKAHRQGIETGERIESLCVHQ*VLEVHA Trigger: GGCATGGACTTCAAGAACTCACTGATGCACGCAGAG...ACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTGAGCTTTAATTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | TTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCCTCTGCGTGCATCAGTaGGTTCTTGAAGTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: LLFASKCCMKMMLWKATGLCVHQ*VLEVHA Trigger: GGCATGGACTTCAAGAACTCACTGATGCACGCAGAG...GCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | AGTGAGGTAGGCAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGGTGCATGGAGCTCTCTaGTGGCCGCCTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVGNALLFASKCCMKMMVHGAL*WPPLTS Trigger: AGATGTCAGAGGCGGCCAGCAGAGAGCTCCATGCAC...CATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | AAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGACTCCTTCAGACTTGGTaGCTTCATCAGCTGTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: KMMLWKATGIALVFLHARLLQTW*LHQLFN Trigger: ATTGAACAGCTGATGAAGGCACCAAGTCTGAAGGAG...TCTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023535.4 |
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| CDS-3UTR CCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCTCTTGTGCTTGTGCATaGAGCTCTCTGCTGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESSCACA*SSLLAA Trigger: GGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGA...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGATTCGAGAAGAATCTTaGCTGAGGACCAATAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: EDDALESHWHSPSLPACQIREES*LRTNRQ Trigger: TTGTCTATTGGTCCTCAGTCAAGATTCTTCTCGAAT...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGAGCAAGTGTAAGAAATaGTCACTCTGCAGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: EDDALESHWHSPSLPACQSKCKK*SLCSTF Trigger: GAATGTACTGCAGAGTGATCATTTCTTACACTTGCT...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | TTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCATAGCCTCTGTAGCAGAGTCATaGCTGAAGCTCCTATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FASKCCMKMMLWKATGIASVAES*LKLLSE Trigger: TTCAGATAGGAGCTTCAGTCATGACTCTGCTACAGA...GGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTTGCTTATATTGGTGCTGATCTaGGCCATCAAAGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGIETGERIESEVGNALLILVLI*AIKASL Trigger: CAGAGAAGCTTTGATGGCTCAGATCAGCACCAATAT...AAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | TTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCATAGCCATATTGGTGCTGATCTaGGCCATCAAAGCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FASKCCMKMMLWKATGIAILVLI*AIKASL Trigger: CAGAGAAGCTTTGATGGCTCAGATCAGCACCAATAT...GGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTGTTCAATATTGGTGCTaGTCTGAGCCATCAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HRQGIETGERIESEVGNAVQYWC*SEPSKL Trigger: AAGCTTTGATGGCTCAGATCAGCACCAATATTGAAC...AGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCTCGTTCTTGTGCTTGTaGATGGAGCTCTCTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESSFLCL*MELSAG Trigger: GCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGA...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | CACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTGGATGCCACATCTCTTaGAAGGGGTATTCCATTTAT | + |
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Preference number: 4 (lower is better) Translates to: HRQGIETGERIESEVGNAGCHIS*KGYSIY Trigger: ATAAATGGAATACCCCTTGCAAGAGATGTGGCATCC...AGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGCTTCTCCACTTGACCTaGATGAATTATTTCAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: EDDALESHWHSPSLPACQLLHLT*MNYFKH Trigger: ATGCTTGAAATAATTCATCCAGGTCAAGTGGAGAAG...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTAGCAAGTGTAAGAAATaGTCACTCTGCAGTACATTC | + |
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Preference number: 4 (lower is better) Translates to: HRQGIETGERIESEVGNASKCKK*SLCSTF Trigger: GAATGTACTGCAGAGTGATCATTTCTTACACTTGCT...AGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CCCACAATTAAAGCTCACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTAGCACGGGTGTCTTTTaGCATAATCGTCCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PTIKAHRQGIETGERIESSTGVF*HNRPLV Trigger: AACAAGTGGACGATTATGTCAAAAGACACCCGTGCT...ACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTGAGCTTTAATTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCAGGGTGCTTGTATGTaGTTCAGGGTGGTAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESQGACM*FRVVRW Trigger: CCATCTTACCACCCTGAAGCACATACAAGCACCCTG...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023535.4 |
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| CDS-3UTR CCA 90 bp | CCCACAATTAAAGCTCACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTAGAGATGGCCTCTGTTaGCGAAAATTCTTCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PTIKAHRQGIETGERIESRDGLC*RKFFLS Trigger: GGAAAGGAAGAATTTTCGCCAACAGAGGCCATCTCT...ACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTGAGCTTTAATTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | AAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGATATAGAGTTGAAAACTaGGATGATGTAAGACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KMMLWKATGIALVFLHARYRVEN*DDVRLP Trigger: GGGAAGTCTTACATCATCCCAGTTTTCAACTCTATA...TCTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCTGAAGTCGTTCTTGTaGTTGTGCATGGAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESLKSFL*LCMELS Trigger: AGAGAGCTCCATGCACAAGCACAAGAACGACTTCAG...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTTGCTTAGTATCTGTGTAAGCTaGGAAATTGTAGACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: QGIETGERIESEVGNALLSICVS*EIVDQP Trigger: TGGTTGGTCTACAATTTCCCAGCTTACACAGATACT...AAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGTCTCTATGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | TTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCATAGCCAGTATCTGTGTAAGCTaGGAAATTGTAGACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: FASKCCMKMMLWKATGIASICVS*EIVDQP Trigger: TGGTTGGTCTACAATTTCCCAGCTTACACAGATACT...GGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCTCTGTAGCAGAGTCATaGCTGAAGCTCCTATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESSVAES*LKLLSE Trigger: TTCAGATAGGAGCTTCAGTCATGACTCTGCTACAGA...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCAGCACGGGTGTCTTTTaGCATAATCGTCCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESSTGVF*HNRPLV Trigger: AACAAGTGGACGATTATGTCAAAAGACACCCGTGCT...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| 3UTR CAA 72 bp | ACAGGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTaGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATG | + |
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Preference number: 4 (lower is better) Translates to: TGERIESEVGNA*LFASKCCMKMM Trigger: CATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | TTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCCTCTTCACCCTTAGTTaGATTGATGAAACATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLFASKCCMKMMLWKATGLFTLS*IDETCL Trigger: CAAACATGTTTCATCAATGCAACTAAGGGTGAAGAG...GCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | TTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCATAGCCTGTAGTAATTTATCTTaGTCTTCACCCTTAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FASKCCMKMMLWKATGIACSNLS*SSPLVA Trigger: TGCAACTAAGGGTGAAGAGCAAGATAAATTACTACA...GGCTATGCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | ACTGAATATGCTGTCACTGCTAACTATGAAGGTAGGTTTCTAGTGAAGTTACAGCTGAAGTCGTTCTTGTaGTTGTGCATGGAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TEYAVTANYEGRFLVKLQLKSFL*LCMELS Trigger: AGAGAGCTCCATGCACAAGCACAAGAACGACTTCAG...CTGTAACTTCACTAGAAACCTACCTTCATAGTTAGCAGTGACAGCATATTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | GTCACTGCTAACTATGAAGGTAGGTTTCTAGTGAAGTTACAGATGTGGGTGATATCTAAAGAGTTTGGATaGCACATCTCTTGCAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VTANYEGRFLVKLQMWVISKEFG*HISCKG Trigger: CCCCTTGCAAGAGATGTGGCATCCAAACTCTTTAGA...TATCACCCACATCTGTAACTTCACTAGAAACCTACCTTCATAGTTAGCAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCATTCGAGAAGAATCTTaGCTGAGGACCAATAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QCFAFCFQVLHEDDALESIREES*LRTNRQ Trigger: TTGTCTATTGGTCCTCAGTCAAGATTCTTCTCGAAT...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR GCA 90 bp | GGGGAAAGAATTGAGAGTGAGGTAGGCAATGCTTTGCTTTTTGCTTCCAAGTGTCTCTTCACCCTTAGTTaGATTGATGAAACATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GERIESEVGNALLFASKCLFTLS*IDETCL Trigger: CAAACATGTTTCATCAATGCAACTAAGGGTGAAGAG...ACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACTCTCAATTCTTTCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR TCA 90 bp | ACTGAATATGCTGTCACTGCTAACTATGAAGGTAGGTTTCTAGTGAAGTTACAGGGGGTATTCCATTTATaGAACAAGGATGGAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TEYAVTANYEGRFLVKLQGVFHL*NKDGGR Trigger: TCTACCTCCATCCTTGTTTCATAAATGGAATACCCC...CTGTAACTTCACTAGAAACCTACCTTCATAGTTAGCAGTGACAGCATATTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGGTAGGCAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTTCTCCACTTGACCTaGATGAATTATTTCAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SEVGNALLFASKCCMKMMLLHLT*MNYFKH Trigger: ATGCTTGAAATAATTCATCCAGGTCAAGTGGAGAAG...CATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | AGTATGCCAGGCAAGCAGCAACTTGGAAACAGCAGAGCTGTTTATAGTCAGGACGTGCTGAAGTCGTTCTaGTGCTTGTGCATGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SMPGKQQLGNSRAVYSQDVLKSF*CLCMEL Trigger: GAGCTCCATGCACAAGCACAAGAACGACTTCAGCAC...GTCCTGACTATAAACAGCTCTGCTGTTTCCAAGTTGCTGCTTGCCTGGCATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | GAAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGTGGATGCCACATCTCTaGCAAGGGGTATTCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: EDDALESHWHSPSLPACQWMPHL*QGVFHL Trigger: TAAATGGAATACCCCTTGCAAGAGATGTGGCATCCA...CTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCCACTGGCCTAAAGACAAGATCCTaGGGTCTGTACCGGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLFASKCCMKMMLWKATGLKTRS*GLYRLA Trigger: AGCCAGCCGGTACAGACCCAAGGATCTTGTCTTTAG...GCCAGTGGCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | CCCACAATTAAAGCTCACAGACAGGGCATAGAGACAGGGGAAAGAATTGAGAGTGTGCTGAAGTCGTTCTaGTGCTTGTGCATGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: PTIKAHRQGIETGERIESVLKSF*CLCMEL Trigger: GAGCTCCATGCACAAGCACAAGAACGACTTCAGCAC...ACTCTCAATTCTTTCCCCTGTCTCTATGCCCTGTCTGTGAGCTTTAATTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGTAGGCAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTTCCACCAGGGTGCTaGTATGTGCTTCAGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SEVGNALLFASKCCMKMMLPPGC*YVLQGG Trigger: ACCACCCTGAAGCACATACAAGCACCCTGGTGGAAG...CATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTGCCTACCTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023535.4 |
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| CDS-3UTR CAA 90 bp | AAGATGATGCTCTGGAAAGCCACTGGCATAGCCCTAGTCTTCCTGCATGCCAGAATTGTACTTCTCCACTaGACCTGGATGAATTATTTC | + |
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Preference number: 5 (lower is better) Translates to: KMMLWKATGIALVFLHARIVLLH*TWMNYF Trigger: GAAATAATTCATCCAGGTCAAGTGGAGAAGTACAAT...TCTGGCATGCAGGAAGACTAGGGCTATGCCAGTGGCTTTCCAGAGCATCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCAAGTCGTTCTTGTGCTaGTGCATGGAGCTCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: QCFAFCFQVLHEDDALESKSFLC*CMELSA Trigger: AGCAGAGAGCTCCATGCACAAGCACAAGAACGACTT...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | ACTGAATATGCTGTCACTGCTAACTATGAAGGTAGGTTTCTAGTGAAGTTACAGCTAAAGACAAGATCCTaGGGTCTGTACCGGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TEYAVTANYEGRFLVKLQLKTRS*GLYRLA Trigger: AGCCAGCCGGTACAGACCCAAGGATCTTGTCTTTAG...CTGTAACTTCACTAGAAACCTACCTTCATAGTTAGCAGTGACAGCATATTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS CCA 90 bp | TGGGATGATGTAAGACTTCCCGAGGACCTGAATAAAGACTACTTGTaGCACTTTTCTTCTAAAGAGTTTGGATGCCACATCTCTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: WDDVRLPEDLNKDYL*HFSSKEFGCHISCK Trigger: CTTGCAAGAGATGTGGCATCCAAACTCTTTAGAAGAAAAGTGCCACAAGTAGTCTTTATTCAGGTCCTCGGGAAGTCTTACATCATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS-3UTR CAA 90 bp | CAATGCTTTGCTTTTTGCTTCCAAGTGTTGCATGAAGATGATGCTCTGGAAAGCATTGTACTTCTCCACTaGACCTGGATGAATTATTTC | + |
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Preference number: 5 (lower is better) Translates to: QCFAFCFQVLHEDDALESIVLLH*TWMNYF Trigger: GAAATAATTCATCCAGGTCAAGTGGAGAAGTACAAT...GCTTTCCAGAGCATCATCTTCATGCAACACTTGGAAGCAAAAAGCAAAGCATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS GCA 90 bp | CTGAATAAAGACTACTTGTGGCACTTTTCTTCTAAAGAGTTTGGATaGCACATCTCTTGCAAGGGGTATTCCATTTATGAAACAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LNKDYLWHFSSKEFG*HISCKGYSIYETRM Trigger: CATCCTTGTTTCATAAATGGAATACCCCTTGCAAGAGATGTGGCATCCAAACTCTTTAGAAGAAAAGTGCCACAAGTAGTCTTTATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS GCA 72 bp | GCTGAAGTCGTTCTTGTGCTTGTGCATGGAGCTCTCTaGTGGCCGCCTCTGACATCTGAGAGCACGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AEVVLVLVHGAL*WPPLTSESTGV Trigger: GACACCCGTGCTCTCAGATGTCAGAGGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGACTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS CCA 72 bp | GAAGTCGTTCTTGTGCTTGTGCATGGAGCTCTCTGCTaGCCGCCTCTGACATCTGAGAGCACGGGTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EVVLVLVHGALC*PPLTSESTGVF Trigger: AAAGACACCCGTGCTCTCAGATGTCAGAGGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS CAA 72 bp | TATGGCTCTTCCCATAAAATAGTGCTGAAGTCGTTCTaGTGCTTGTGCATGGAGCTCTCTGCTGGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YGSSHKIVLKSF*CLCMELSAGRL Trigger: GAGGCGGCCAGCAGAGAGCTCCATGCACAAGCACAAGAACGACTTCAGCACTATTTTATGGGAAGAGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023535.4 ENSMUST00000114819.8 |
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| CDS CAA 72 bp | GATGTAAGACTTCCCGAGGACCTGAATAAAGACTACTaGTGGCACTTTTCTTCTAAAGAGTTTGGATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DVRLPEDLNKDY*WHFSSKEFGCH Trigger: GTGGCATCCAAACTCTTTAGAAGAAAAGTGCCACAAGTAGTCTTTATTCAGGTCCTCGGGAAGTCTTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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| CDS GCA 72 bp | GACTACTTGTGGCACTTTTCTTCTAAAGAGTTTGGATaGCACATCTCTTGCAAGGGGTATTCCATTTATGAA | + |
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Preference number: 6 (lower is better) Translates to: DYLWHFSSKEFG*HISCKGYSIYE Trigger: TTCATAAATGGAATACCCCTTGCAAGAGATGTGGCATCCAAACTCTTTAGAAGAAAAGTGCCACAAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114819.8 |
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