Pregenerated sensors for IQCA1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038199Ensembl transcript IDs: ENSMUST00000088302.10, ENSMUST00000198887.2, ENSMUST00000200634.5
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAACCGGCACAGCCCCTTCATCTCAGCCAGCTGTGGGCGCTCCGTaGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RTGTAPSSQPAVGAP*SQSASLGRQGSAAL Trigger: CAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGGAGCGCCCACAGCTGGCTGAGATGAAGGGGCTGTGCCGGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | GGTTGGCACCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTTaGCCATGCCAGAGGGTCCCACCAGGAGAATGGAGCGGACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: GWHQFLCTQLGPTSS*PCQRVPPGEWSGQG Trigger: CCCTTGTCCGCTCCATTCTCCTGGTGGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | TCCTCCCCTAGGAAGGCCTGGTTAAGGGTATTCAGGCGTGCTGTCTaGTTGGGCGAAGGGAGCATGCCAATGAACTCCATCTCCACCCGT | + |
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Preference number: 1 (lower is better) Translates to: SSPRKAWLRVFRRAV*LGEGSMPMNSISTR Trigger: ACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCCTGAATACCCTTAACCAGGCCTTCCTAGGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | GGACCAACATCTTCTTGCCCATGCCAGAGGGTCCCACCAGGAGAATaGAGCGGACAAGGGGAGCCATGGTATGTATATCATGGGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GPTSSCPCQRVPPGE*SGQGEPWYVYHGSP Trigger: TGGGCTCCCATGATATACATACCATGGCTCCCCTTGTCCGCTCCATTCTCCTGGTGGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | GGGTATTCAGGCGTGCTGTCTGGTTGGGCGAAGGGAGCATGCCAATaGACTCCATCTCCACCCGTCGATCCTGCTCAATGCGTTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GYSGVLSGWAKGACQ*TPSPPVDPAQCVFS Trigger: AGAGAAAACGCATTGAGCAGGATCGACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCCTGAATACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | CGCTCCGTGGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTaGTTTGTGGCCCTCATGAGGTCTTTCTTTATTCTTTTAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RSVVPISITRSPGLS*FVALMRSFFILLGS Trigger: GGACCCTAAAAGAATAAAGAAAGACCTCATGAGGGCCACAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | TTTGATCCTTCATCCTCTCCTTCATGTCGGGTCCCTCGGTCTCCGTaGGAGACTCGTAGGTCTTCCCTATGGCTTCCTGGAATTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: FDPSSSPSCRVPRSP*ETRRSSLWLPGIPL Trigger: AAGAGGAATTCCAGGAAGCCATAGGGAAGACCTACGAGTCTCTCACGGAGACCGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | CACCTGCTCTGGAGTCTTGTCTGCAAAGATCAGGTAGGATCCACCTaGAGCCTCATCTGGATAATCAGGGAACCGACCAGTAAGGGCACT | + |
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Preference number: 1 (lower is better) Translates to: HLLWSLVCKDQVGST*SLIWIIREPTSKGT Trigger: AGTGCCCTTACTGGTCGGTTCCCTGATTATCCAGATGAGGCTTCAGGTGGATCCTACCTGATCTTTGCAGACAAGACTCCAGAGCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | TGTCCTGGTACCTTCTCTTCTCTCAGGGAAATGGGAAACCAAGTGTaGAGATGGCCCTTACAGCAGGGCTTGAGGTCTAGACCGAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: CPGTFSSLREMGNQV*RWPLQQGLRSRPRV Trigger: TACTCTCGGTCTAGACCTCAAGCCCTGCTGTAAGGGCCATCTCCACACTTGGTTTCCCATTTCCCTGAGAGAAGAGAAGGTACCAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | GTGGCAGTGGACACTGACTGGCATTCAATAAACCATTGTCGTATTTaGTCCTTCATCCTCTCCTTCATGTCGGGTCCCTCGGTCTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: VAVDTDWHSINHCRI*SFILSFMSGPSVSV Trigger: CACGGAGACCGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCAGTCAGTGTCCACTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | TCCGTTTCCAGAGCACATAGCGAGAAGCATAATCAGGCCTGGGAATaGAGAGAATACGCTCATAGAACCGGCACAGCCCCTTCATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SVSRAHSEKHNQAWE*REYAHRTGTAPSSQ Trigger: CTGAGATGAAGGGGCTGTGCCGGTTCTATGAGCGTATTCTCTTCATTCCCAGGCCTGATTATGCTTCTCGCTATGTGCTCTGGAAACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | TGTCTCATTAGCTCATCCACCTGTACCCGGATCTCCATCTCCACTTaGTTTCTTTTCTCCTCCCGGAGGGTCTCAGAGTCAAAGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CLISSSTCTRISIST*FLFSSRRVSESKFW Trigger: CCAGAACTTTGACTCTGAGACCCTCCGGGAGGAGAAAAGAAAGCAAGTGGAGATGGAGATCCGGGTACAGGTGGATGAGCTAATGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | ACTTGCTTTCTTTTCTCCTCCCGGAGGGTCTCAGAGTCAAAGTTCTaGCTGGGATGCTTGTTGTCATACCGGCTCTTCCACACACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TCFLFSSRRVSESKF*LGCLLSYRLFHTLV Trigger: CACAAGTGTGTGGAAGAGCCGGTATGACAACAAGCATCCCAGCCAGAACTTTGACTCTGAGACCCTCCGGGAGGAGAAAAGAAAGCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | CTGGGTATTTGCCCATCAGGTTGTCAGGTGACAGGTCAAACAGGTTaGCACCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: LGICPSGCQVTGQTG*HQFLCTQLGPTSSC Trigger: GCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACCTGTTTGACCTGTCACCTGACAACCTGATGGGCAAATACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | CATGTTCTGCCGGATATCAAACAGGGACGGCATGGGCATCTTGTTTaGCAAAGTCAGAGTGGACCCGAGATAGAGGCAATCACCAATGTA | + |
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Preference number: 1 (lower is better) Translates to: HVLPDIKQGRHGHLV*QSQSGPEIEAITNV Trigger: TACATTGGTGATTGCCTCTATCTCGGGTCCACTCTGACTTTGGCAAACAAGATGCCCATGCCGTCCCTGTTTGATATCCGGCAGAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | AGACAATGTGTACTAGTAGCTGTGCTCCGTTCTTTCCTGGGTATTTaGCCATCAGGTTGTCAGGTGACAGGTCAAACAGGTTGGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: RQCVLVAVLRSFLGI*PSGCQVTGQTGWHQ Trigger: CTGGTGCCAACCTGTTTGACCTGTCACCTGACAACCTGATGGGCAAATACCCAGGAAAGAACGGAGCACAGCTACTAGTACACATTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | GAACAGGTGGTGAGAATGCTATGGGATCATTCAAGACACTCTTCCTaGTTTGTCCTGGTACCTTCTCTTCTCTCAGGGAAATGGGAAACC | + |
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Preference number: 1 (lower is better) Translates to: EQVVRMLWDHSRHSS*FVLVPSLLSGKWET Trigger: GGTTTCCCATTTCCCTGAGAGAAGAGAAGGTACCAGGACAAATCAGGAAGAGTGTCTTGAATGATCCCATAGCATTCTCACCACCTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 90 bp | TGCTTGTTGTCATACCGGCTCTTCCACACACTTGTGTATTCCTCATaGCCAGCATTAATCACAGGAATAGATTTGGATGGCAGCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: CLLSYRLFHTLVYSS*PALITGIDLDGSTL Trigger: CAGAGTGCTGCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAGGAATACACAAGTGTGTGGAAGAGCCGGTATGACAACAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 90 bp | TGTGTATTCCTCATGCCCAGCATTAATCACAGGAATAGATTTGGATaGCAGCACTCTGAACATCACTTCTGGCTCCTTCTTGACCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: CVFLMPSINHRNRFG*QHSEHHFWLLLDLF Trigger: GAAAAGGTCAAGAAGGAGCCAGAAGTGATGTTCAGAGTGCTGCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAGGAATACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 90 bp | AATAGATGGATGAAAGAGATAAGGGATGACAGAAAGAACAGGTGGTaGGAATGCTATGGGATCATTCAAGACACTCTTCCTGATTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: NRWMKEIRDDRKNRW*ECYGIIQDTLPDLS Trigger: GGACAAATCAGGAAGAGTGTCTTGAATGATCCCATAGCATTCTCACCACCTGTTCTTTCTGTCATCCCTTATCTCTTTCATCCATCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR GCA 90 bp | CCGTGGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTGCTTTGTGGCCCTGGCACCAGTTTCTGTaGACACAGCTTGGACCAACA | + |
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Preference number: 2 (lower is better) Translates to: PWSQSASLGRQGSAALWPWHQFL*TQLGPT Trigger: TGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCA...GGGCCACAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | TCCCCTAGGAAGGCCTGGTTAAGGGTATTCAGGCGTGCTGTCTGGTaGGGCGAAGGGAGCATGCCAATGAACTCCATCTCCACCCGTCGA | + |
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Preference number: 2 (lower is better) Translates to: SPRKAWLRVFRRAVW*GEGSMPMNSISTRR Trigger: TCGACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCCTGAATACCCTTAACCAGGCCTTCCTAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | CATAGAACCGGCACAGCCCCTTCATCTCAGCCAGCTGTGGGCGCTCCGTGGTCCTTCTTTCTACTCTCCTaGGCTTGTGCTTCCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: HRTGTAPSSQPAVGAPWSFFLLS*ACASRS Trigger: AGACCTGGAAGCACAAGCCCAGGAGAGTAGAAAGAA...GGACCACGGAGCGCCCACAGCTGGCTGAGATGAAGGGGCTGTGCCGGTTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTGCTTTGTGGCCCACAGGTCAAACAGGTTaGCACCAGTTTCTGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: PWSQSASLGRQGSAALWPTGQTG*HQFLCT Trigger: TGTGCACAGAAACTGGTGCCAACCTGTTTGACCTGT...GGGCCACAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | AGGTTGGCACCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTaGCCCATGCCAGAGGGTCCCACCAGGAGAATGGAGCGGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: RLAPVSVHTAWTNIF*PMPEGPTRRMERTR Trigger: CCTTGTCCGCTCCATTCTCCTGGTGGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | CAGGGCACTAACATCCAGACTCGAGGTCAGCTGTACTCCCCTTCCTaGGCTCTCTATCATCCGTTTCCAGAGCACATAGCGAGAAGCATA | + |
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Preference number: 2 (lower is better) Translates to: QGTNIQTRGQLYSPS*ALYHPFPEHIARSI Trigger: TATGCTTCTCGCTATGTGCTCTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCTGGATGTTAGTGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTGGTCCTTCTTTCTACTCTCCTGGGCTTGTGCTTCCAGGTCTAGTCTCAAAGGGAGCATGCCAATaGACTCCATCTCCACCCGTC | + |
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Preference number: 2 (lower is better) Translates to: SLGPSFYSPGLVLPGLVSKGACQ*TPSPPV Trigger: GACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTT...TGAGACTAGACCTGGAAGCACAAGCCCAGGAGAGTAGAAAGAAGGACCAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | AGACTCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGATGGGAAACCAAGTGTaGAGATGGCCCTTACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RLEVSCTPLPWLSIIRFQMGNQV*RWPLQQ Trigger: CTGCTGTAAGGGCCATCTCCACACTTGGTTTCCCAT...CTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | CCATGTTCTGCCGGATATCAAACAGGGACGGCATGGGCATCTTGTTaGCCAAAGTCAGAGTGGACCCGAGATAGAGGCAATCACCAATGT | + |
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Preference number: 2 (lower is better) Translates to: PCSAGYQTGTAWASC*PKSEWTRDRGNHQC Trigger: ACATTGGTGATTGCCTCTATCTCGGGTCCACTCTGACTTTGGCAAACAAGATGCCCATGCCGTCCCTGTTTGATATCCGGCAGAACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGGTCGATCCTGCTCAATaGGTTTTCTCTGGAGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: RLEVSCTPLPWLSIIRFQVDPAQ*VFSGGN Trigger: GTTACCTCCAGAGAAAACGCATTGAGCAGGATCGAC...CTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR GCA 90 bp | TCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGAGCACTCTGGAGTCTTGTCTaGAAAGATCAGGTAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SRSAVLPFLGSLSSVSRALWSLV*KDQVGS Trigger: GGATCCTACCTGATCTTTGCAGACAAGACTCCAGAG...TGCTCTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | AGACTCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGCGTAGGTCTTCCCTATaGCTTCCTGGAATTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RLEVSCTPLPWLSIIRFQRRSSL*LPGIPL Trigger: AAGAGGAATTCCAGGAAGCCATAGGGAAGACCTACG...CTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTTAAGGGATTCCTCCTCCTCCCTGTATACTGGATCCAGCCTTGCCAAGTGCAATCAGGCCTGGGAATaGAGAGAATACGCTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: SLRDSSSSLYTGSSLAKCNQAWE*REYAHR Trigger: TCTATGAGCGTATTCTCTTCATTCCCAGGCCTGATT...GCACTTGGCAAGGCTGGATCCAGTATACAGGGAGGAGGAGGAATCCCTTAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | AGACTCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGTTCCCTATGGCTTCCTaGAATTCCTCTTCCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RLEVSCTPLPWLSIIRFQFPMAS*NSSSFS Trigger: GGAAAAGGAAGAGGAATTCCAGGAAGCCATAGGGAA...CTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | TCGAGGTCAGCTGTACTCCCCTTCCTTGGCTCTCTATCATCCGTTTCCAGAGCACGTCCTTTCTTCCTTTaGGACCTTCTTGTAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SRSAVLPFLGSLSSVSRARPFFL*DLLVEG Trigger: ACCTTCTACAAGAAGGTCCCAAAGGAAGAAAGGACG...TGCTCTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | AAGACAATGTGTACTAGTAGCTGTGCTCCGTTCTTTCCTGGGTATTaGCCCATCAGGTTGTCAGGTGACAGGTCAAACAGGTTGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: KTMCTSSCAPFFPGY*PIRLSGDRSNRLAP Trigger: TGGTGCCAACCTGTTTGACCTGTCACCTGACAACCTGATGGGCAAATACCCAGGAAAGAACGGAGCACAGCTACTAGTACACATTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTATGGGATCATTCAAGACACTCTTCCTGATTTGTCCTGGTACCTTCTCTTCAGTTTGGGTCAGCTGTaGCAGTGGACACTGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: CYGIIQDTLPDLSWYLLFSLGQL*QWTLTG Trigger: GCCAGTCAGTGTCCACTGCCACAGCTGACCCAAACT...GAAGAGAAGGTACCAGGACAAATCAGGAAGAGTGTCTTGAATGATCCCATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | GCACCTGCCATTCACCACATCACACCCCACAGCAAAGACCATCACTTTTTCTTCTGCTCCGTTCTTTCCTaGGTATTTGCCCATCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: APAIHHITPHSKDHHFFFCSVLS*VFAHQV Trigger: AACCTGATGGGCAAATACCCAGGAAAGAACGGAGCA...GAAGAAAAAGTGATGGTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTCTTCAAACAGTGAGTCCACAGACCGGTCTGGGGTCAGATCTTTTTCCAGAAAGAACAGGTGGTaGGAATGCTATGGGATCATT | + |
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Preference number: 2 (lower is better) Translates to: TSSSNSESTDRSGVRSFSRKNRW*ECYGII Trigger: AATGATCCCATAGCATTCTCACCACCTGTTCTTTCT...GGAAAAAGATCTGACCCCAGACCGGTCTGTGGACTCACTGTTTGAAGAGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 90 bp | ACACTTGTGTATTCCTCATGCCCAGCATTAATCACAGGAATAGATTaGGATGGCAGCACTCTGAACATCACTTCTGGCTCCTTCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: TLVYSSCPALITGID*DGSTLNITSGSFLT Trigger: GGTCAAGAAGGAGCCAGAAGTGATGTTCAGAGTGCTGCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAGGAATACACAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATGAGGTCTTTCTTTATTCTTTTAGGGTCCATCGTCCTTTCTTCCTTTGGGGTGGTGAGAATGCTATaGGATCATTCAAGACACTCT | + |
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Preference number: 2 (lower is better) Translates to: LMRSFFILLGSIVLSSFGVVRML*DHSRHS Trigger: AGAGTGTCTTGAATGATCCCATAGCATTCTCACCAC...CCCAAAGGAAGAAAGGACGATGGACCCTAAAAGAATAAAGAAAGACCTCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 72 bp | ACAGCCCCTTCATCTCAGCCAGCTGTGGGCGCTCCGTaGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TAPSSQPAVGAP*SQSASLGRQGS Trigger: TGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGGAGCGCCCACAGCTGGCTGAGATGAAGGGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CCA 72 bp | TGCCGCATCCTCCGTGACTCCTCCCCTAGGAAGGCCTaGTTAAGGGTATTCAGGCGTGCTGTCTGGTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: CRILRDSSPRKA*LRVFRRAVWLG Trigger: GCCCAACCAGACAGCACGCCTGAATACCCTTAACCAGGCCTTCCTAGGGGAGGAGTCACGGAGGATGCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR-3UTR CAA 90 bp | CCGTGGTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTGCTTTGTGGCCCGACAGGTCAAACAGGTaGGCACCAGTTTCTGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PWSQSASLGRQGSAALWPDRSNR*APVSVH Trigger: GTGCACAGAAACTGGTGCCAACCTGTTTGACCTGTC...GGGCCACAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGACCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR TCA 72 bp | GGCGTGCTGTCTGGTTGGGCGAAGGGAGCATGCCAATaGACTCCATCTCCACCCGTCGATCCTGCTCAATGC | + |
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Preference number: 3 (lower is better) Translates to: GVLSGWAKGACQ*TPSPPVDPAQC Trigger: GCATTGAGCAGGATCGACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 72 bp | CCTATGGCTTCCTGGAATTCCTCTTCCTTTTCCACCTaGCGCATCCTCCGTGACTCCTCCCCTAGGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: PMASWNSSSFST*RILRDSSPRKA Trigger: GGCCTTCCTAGGGGAGGAGTCACGGAGGATGCGGCAGGTGGAAAAGGAAGAGGAATTCCAGGAAGCCATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR GCA 72 bp | GAGCCCAGCCGAAGAACCCCATACAGCGCCATGTTCTaGCGGATATCAAACAGGGACGGCATGGGCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EPSRRTPYSAMF*RISNRDGMGIL Trigger: CAAGATGCCCATGCCGTCCCTGTTTGATATCCGGCAGAACATGGCGCTGTATGGGGTTCTTCGGCTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | GTCCCACCAGGAGAATGGAGCGGACAAGGGGAGCCATaGTATGTATATCATGGGAGCCCAGCCGAAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: VPPGEWSGQGEP*YVYHGSPAEEP Trigger: GGGTTCTTCGGCTGGGCTCCCATGATATACATACCATGGCTCCCCTTGTCCGCTCCATTCTCCTGGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | TCATCCTCTCCTTCATGTCGGGTCCCTCGGTCTCCGTaGGAGACTCGTAGGTCTTCCCTATGGCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSPSCRVPRSP*ETRRSSLWLPG Trigger: TCCAGGAAGCCATAGGGAAGACCTACGAGTCTCTCACGGAGACCGAGGGACCCGACATGAAGGAGAGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | TCCTCCTCCCTGTATACTGGATCCAGCCTTGCCAAGTaGCCCACAAACTCAGAGGCAACCAGTGGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSLYTGSSLAK*PTNSEATSGFL Trigger: CAAGAAGCCACTGGTTGCCTCTGAGTTTGTGGGGCACTTGGCAAGGCTGGATCCAGTATACAGGGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | AGGAAGGCCTGGTTAAGGGTATTCAGGCGTGCTGTCTaGTTGGGCGAAGGGAGCATGCCAATGAACTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RKAWLRVFRRAV*LGEGSMPMNSI Trigger: GATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCCTGAATACCCTTAACCAGGCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | AGCTCATCCACCTGTACCCGGATCTCCATCTCCACTTaGTTTCTTTTCTCCTCCCGGAGGGTCTCAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSTCTRISIST*FLFSSRRVSES Trigger: TGACTCTGAGACCCTCCGGGAGGAGAAAAGAAAGCAAGTGGAGATGGAGATCCGGGTACAGGTGGATGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | CTTTTCTCCTCCCGGAGGGTCTCAGAGTCAAAGTTCTaGCTGGGATGCTTGTTGTCATACCGGCTCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFSSRRVSESKF*LGCLLSYRLFH Trigger: GTGGAAGAGCCGGTATGACAACAAGCATCCCAGCCAGAACTTTGACTCTGAGACCCTCCGGGAGGAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | TCTTCTTGCCCATGCCAGAGGGTCCCACCAGGAGAATaGAGCGGACAAGGGGAGCCATGGTATGTATATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSCPCQRVPPGE*SGQGEPWYVYH Trigger: ATGATATACATACCATGGCTCCCCTTGTCCGCTCCATTCTCCTGGTGGGACCCTCTGGCATGGGCAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | CCGGATATCAAACAGGGACGGCATGGGCATCTTGTTTaGCAAAGTCAGAGTGGACCCGAGATAGAGGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: PDIKQGRHGHLV*QSQSGPEIEAI Trigger: GATTGCCTCTATCTCGGGTCCACTCTGACTTTGGCAAACAAGATGCCCATGCCGTCCCTGTTTGATATCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | GTCCCAATCAGCATCACTCGGTCGCCAGGGCTCAGCTaGTTTGTGGCCCTCATGAGGTCTTTCTTTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPISITRSPGLS*FVALMRSFFIL Trigger: AAGAATAAAGAAAGACCTCATGAGGGCCACAAAGCAGCTGAGCCCTGGCGACCGAGTGATGCTGATTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | GGGACGGCATGGGCATCTTGTTTGCCAAAGTCAGAGTaGACCCGAGATAGAGGCAATCACCAATGTAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTAWASCLPKSE*TRDRGNHQCSH Trigger: GTGACTACATTGGTGATTGCCTCTATCTCGGGTCCACTCTGACTTTGGCAAACAAGATGCCCATGCCGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | TGCCCATCAGGTTGTCAGGTGACAGGTCAAACAGGTTaGCACCAGTTTCTGTGCACACAGCTTGGACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: CPSGCQVTGQTG*HQFLCTQLGPT Trigger: TGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACCTGTTTGACCTGTCACCTGACAACCTGATGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | CCATTCCTTAAGGGATTCCTCCTCCTCCCTGTATACTaGATCCAGCCTTGCCAAGTGCCCCACAAACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PFLKGFLLLPVY*IQPCQVPHKLR Trigger: TCTGAGTTTGTGGGGCACTTGGCAAGGCTGGATCCAGTATACAGGGAGGAGGAGGAATCCCTTAAGGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | AGAAGGGACAGTCTCACGAGAGAACAGGTTGGGGAATaGGGTATAGAAGTTTGGGTCAGCTGTGGCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRDSLTREQVGE*GIEVWVSCGSG Trigger: TCCACTGCCACAGCTGACCCAAACTTCTATACCTCATTCCCCAACCTGTTCTCTCGTGAGACTGTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | AGAGCACATAGCGAGAAGCATAATCAGGCCTGGGAATaGAGAGAATACGCTCATAGAACCGGCACAGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RAHSEKHNQAWE*REYAHRTGTAP Trigger: AGGGGCTGTGCCGGTTCTATGAGCGTATTCTCTTCATTCCCAGGCCTGATTATGCTTCTCGCTATGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | ACCTTCTCTTCTCTCAGGGAAATGGGAAACCAAGTGTaGAGATGGCCCTTACAGCAGGGCTTGAGGTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: TFSSLREMGNQV*RWPLQQGLRSR Trigger: TCTAGACCTCAAGCCCTGCTGTAAGGGCCATCTCCACACTTGGTTTCCCATTTCCCTGAGAGAAGAGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | TGGAGTCTTGTCTGCAAAGATCAGGTAGGATCCACCTaGAGCCTCATCTGGATAATCAGGGAACCGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WSLVCKDQVGST*SLIWIIREPTS Trigger: ACTGGTCGGTTCCCTGATTATCCAGATGAGGCTTCAGGTGGATCCTACCTGATCTTTGCAGACAAGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | GTACTAGTAGCTGTGCTCCGTTCTTTCCTGGGTATTTaGCCATCAGGTTGTCAGGTGACAGGTCAAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VLVAVLRSFLGI*PSGCQVTGQTG Trigger: ACCTGTTTGACCTGTCACCTGACAACCTGATGGGCAAATACCCAGGAAAGAACGGAGCACAGCTACTAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | ACAAACTCAGAGGCAACCAGTGGCTTCTTGATAAGTTaGAGGAGCCGGCGTTCTGTCAACACTGACTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TNSEATSGFLIS*RSRRSVNTDWI Trigger: TATCCAGTCAGTGTTGACAGAACGCCGGCTCCTTCAACTTATCAAGAAGCCACTGGTTGCCTCTGAGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | GTTTTCTCAGTATTTCCAATCCAGATGACAGAGGGCTaGAGGAGCCGGGCCACCTTAAAGACAATGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: VFSVFPIQMTEG*RSRATLKTMCT Trigger: AGTACACATTGTCTTTAAGGTGGCCCGGCTCCTCCAGCCCTCTGTCATCTGGATTGGAAATACTGAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | GACACTGACTGGCATTCAATAAACCATTGTCGTATTTaGTCCTTCATCCTCTCCTTCATGTCGGGTCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: DTDWHSINHCRI*SFILSFMSGPS Trigger: CGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCAGTCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR GCA 72 bp | TCATACCGGCTCTTCCACACACTTGTGTATTCCTCATaGCCAGCATTAATCACAGGAATAGATTTGGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SYRLFHTLVYSS*PALITGIDLDG Trigger: GCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAGGAATACACAAGTGTGTGGAAGAGCCGGTATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | CTCATGCCCAGCATTAATCACAGGAATAGATTTGGATaGCAGCACTCTGAACATCACTTCTGGCTCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LMPSINHRNRFG*QHSEHHFWLLL Trigger: AAGAAGGAGCCAGAAGTGATGTTCAGAGTGCTGCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | TATGGGATCATTCAAGACACTCTTCCTGATTTGTCCTaGTACCTTCTCTTCTCTCAGGGAAATGGGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: YGIIQDTLPDLS*YLLFSQGNGKP Trigger: TGGTTTCCCATTTCCCTGAGAGAAGAGAAGGTACCAGGACAAATCAGGAAGAGTGTCTTGAATGATCCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | TCCTTCTCTTTCTCCTTATTCTTCTCTTTCTTCTCTTaGTCCTTCTTTCTACTCTCCTGGGCTTGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFSFSLFFSFFS*SFFLLSWACAS Trigger: GGAAGCACAAGCCCAGGAGAGTAGAAAGAAGGACCAAGAGAAGAAAGAGAAGAATAAGGAGAAAGAGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | CTTTATAAGGCCAATAATAACAAGCTCTTCAAACAGTaGGTCCACAGACCGGTCTGGGGTCAGATCTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYKANNNKLFKQ*VHRPVWGQIFF Trigger: GAAAAAGATCTGACCCCAGACCGGTCTGTGGACTCACTGTTTGAAGAGCTTGTTATTATTGGCCTTATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR TCA 72 bp | ATGAAAGAGATAAGGGATGACAGAAAGAACAGGTGGTaGGAATGCTATGGGATCATTCAAGACACTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MKEIRDDRKNRW*ECYGIIQDTLP Trigger: AGGAAGAGTGTCTTGAATGATCCCATAGCATTCTCACCACCTGTTCTTTCTGTCATCCCTTATCTCTTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CCA 72 bp | CTTTATTCTTTTAGGGTCCATCGTCCTTTCTTCCTTTaGGACCTTCTTGTAGAAGGTTTTCTCAGTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LYSFRVHRPFFL*DLLVEGFLSIS Trigger: GGAAATACTGAGAAAACCTTCTACAAGAAGGTCCCAAAGGAAGAAAGGACGATGGACCCTAAAAGAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | CATAGAACCGGCACAGCCCCTTCATCTCAGCCAGCTGTGGGCGCTCCGTGGTCCTCTGCCGCTCTCGGCTaGGCACAGGTTCGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HRTGTAPSSQPAVGAPWSSAALG*AQVRAQ Trigger: CTGTGCTCGAACCTGTGCCCAGCCGAGAGCGGCAGA...GGACCACGGAGCGCCCACAGCTGGCTGAGATGAAGGGGCTGTGCCGGTTCTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTAAGGGATTCCTCCTCCTCCCTGTATACTGGATCCAGCCTTGCCAAGTGCGGGGAGCAGCAGGGGTaGCTGCTGCTGGCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRDSSSSLYTGSSLAKCGEQQG*LLLAGV Trigger: GACACCAGCCAGCAGCAGTCACCCCTGCTGCTCCCC...GCACTTGGCAAGGCTGGATCCAGTATACAGGGAGGAGGAGGAATCCCTTAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGCCGCTCTCGGCTaGGCACAGGTTCGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSPQEPPGPLCVCHTLNSAALG*AQVRAQ Trigger: CTGTGCTCGAACCTGTGCCCAGCCGAGAGCGGCAGA...GTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGGCTGTGGGCGCTCCGTaGTCCCAATCAGCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRSHLGLYVSVTPLTLEAVGAP*SQSASL Trigger: GAGTGATGCTGATTGGGACCACGGAGCGCCCACAGC...CTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACGCACTAGCTCGTCCTTaGGCTCCAGTACACGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKSPQEPPGPLCVCHTLNALARP*APVHVP Trigger: CGGGACGTGTACTGGAGCTCAAGGACGAGCTAGTGC...GTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGGCACTGCCGGGGTCAGCTTaGGATCCTGCAGTACTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSHLGLYVSVTPLTLEALPGSA*DPAVLG Trigger: ACCGAGTACTGCAGGATCTCAAGCTGACCCCGGCAG...TGCCTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACTCCAGGCCTTGTGACTaGAGGCCTAGTGGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEAPAIHHITPHSKDSRPCD*RPSGEQ Trigger: CTGCTCCCCACTAGGCCTGCAGTCACAAGGCCTGGA...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACGTCCCACCAGGAGAATaGAGCGGACAAGGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEAPAIHHITPHSKDVPPGE*SGQGEP Trigger: TGGCTCCCCTTGTCCGCTCCATTCTCCTGGTGGGAC...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | GAACCCCATACAGCGCCATGTTCTGCCGGATATCAAACAGGGACGGCATGGGCAGTCAGCTTGAGATCCTaGAGTACTCGGTCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPHTAPCSAGYQTGTAWAVSLRS*STRSRQ Trigger: CTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGAC...TGCCCATGCCGTCCCTGTTTGATATCCGGCAGAACATGGCGCTGTATGGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTAGCAGCAGGGGTGACTaGTGCTGGCTGGTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRALRSHLGLYVSVTPLTSSRGD*CWLVSP Trigger: AGGAGACACCAGCCAGCAGCAGTCACCCCTGCTGCT...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | ACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGAACTCGGTCCAGGCAGTaGGTCTCGCACAGGTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: TLNSGGTCHSPHHTPQQRTRSRQ*VSHRST Trigger: CGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGT...TCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAGTAGTCGGCCTTGCCTaGCCCGCTCAGCACTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRRALRSHLGLYVSVTPLVVGLA*PAQHFA Trigger: TGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTAC...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGTAGTCGGCCTTGCCTaGCCCGCTCAGCACTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKVVGLA*PAQHFA Trigger: TGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTAC...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTACAGATGACAGAGGGCTaGAGGAGCCGGGCCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KRRALRSHLGLYVSVTPLQMTEG*RSRATL Trigger: TAAGGTGGCCCGGCTCCTCCAGCCCTCTGTCATCTG...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAAGGGAGCATGCCAATaGACTCCATCTCCACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLKGACQ*TPSPPV Trigger: GACGGGTGGAGATGGAGTTCATTGGCATGCTCCCTT...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCTTTTCTTTGGAGACTTaGGGGGTCTGGTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSFSLET*GVWSPP Trigger: GGGAGGAGACCAGACCCCTCAAGTCTCCAAAGAAAA...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCGTCAGCTTGAGATCCTaGAGTACTCGGTCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPVSLRS*STRSRQ Trigger: CTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGAC...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCACATCTTCTTGCCCATaGCAGAGGGTCCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPTSSCP*QRVPPG Trigger: TCCTGGTGGGACCCTCTGGCATGGGCAAGAAGATGT...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGGCAGGACCAACATCTTCTTaGCCATGCCAGAGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSHLGLYVSVTPLTLEAGPTSS*PCQRVP Trigger: TGGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCC...TGCCTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAAGCAGGGGTGACTGCTaGTGGCTGGTGTCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRRALRSHLGLYVSVTPLSRGDC*WLVSPS Trigger: AGAAGGAGACACCAGCCAGCAGCAGTCACCCCTGCT...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCCAACCGACGCTTCTGTaGCTGTACCATCTGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSQPTLL*LYHLVV Trigger: TACGACCAGATGGTACAGCCACAGAAGCGTCGGTTG...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| 3UTR CAA 72 bp | AAGGCCTGGTTAAGGGTATTCAGGCGTGCTGTCTGGTaGGGCGAAGGGAGCATGCCAATGAACTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAWLRVFRRAVW*GEGSMPMNSIS Trigger: GGAGATGGAGTTCATTGGCATGCTCCCTTCGCCCAACCAGACAGCACGCCTGAATACCCTTAACCAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CAA 72 bp | CCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTaGCCCATGCCAGAGGGTCCCACCAGGAGAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSVHTAWTNIF*PMPEGPTRRME Trigger: CTCCATTCTCCTGGTGGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCAAGCTCTTCAAACAGTaGGTCCACAGACCGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPKLFKQ*VHRPVW Trigger: CCAGACCGGTCTGTGGACTCACTGTTTGAAGAGCTT...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCCGGCTGAATTTCTGCTaGCCATTCTCCCAAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSRLNFC*PFSQIL Trigger: GAGGATTTGGGAGAATGGGCAGCAGAAATTCAGCCG...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCTACTGGATCCAGCCTTaGCAAGTGCCCCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPYWIQP*QVPHKL Trigger: GAGTTTGTGGGGCACTTGGCAAGGCTGGATCCAGTA...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGGTCCTTCTTTCTACTCTCCTGGGCTTGTGCTTCCAGGTCTAGTCTCAACTCGGTCCAGGCAGTaGGTCTCGCACAGGTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SLGPSFYSPGLVLPGLVSTRSRQ*VSHRST Trigger: CGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGT...TGAGACTAGACCTGGAAGCACAAGCCCAGGAGAGTAGAAAGAAGGACCAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCCTCCTGAGAAACCAGTaGCTCCAGTCTGTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSLLRNQ*LQSVQD Trigger: ATCCTGAACAGACTGGAGCCACTGGTTTCTCAGGAG...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCTCCTCCCTGTATACTaGATCCAGCCTTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPLLPVY*IQPCQV Trigger: CACTTGGCAAGGCTGGATCCAGTATACAGGGAGGAG...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCTCTCCTTTGTCAATCTaGCCTCCTCAGCCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSSPLSI*PPQPPV Trigger: AACTGGAGGCTGAGGAGGCCAGATTGACAAAGGAGA...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | TCAAACAGGTTGGCACCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTTGGCACTAGCTCGTCCTTaGGCTCCAGTACACGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNRLAPVSVHTAWTNIFLALARP*APVHVP Trigger: CGGGACGTGTACTGGAGCTCAAGGACGAGCTAGTGC...CAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACCTGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | CAAGACACTCTTCCTGATTTGTCCTGGTACCTTCTCTTCTCTCAGGGAAATGGGCTGCCGGGGTCAGCTTaGGATCCTGCAGTACTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDTLPDLSWYLLFSQGNGLPGSA*DPAVLG Trigger: ACCGAGTACTGCAGGATCTCAAGCTGACCCCGGCAG...CCCATTTCCCTGAGAGAAGAGAAGGTACCAGGACAAATCAGGAAGAGTGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCCTCGAAGATTCTCCTaGGAAACCAGTGGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRALRSHLGLYVSVTPLTPRRFS*ETSGSS Trigger: ACTGGAGCCACTGGTTTCTCAGGAGAATCTTCGAGG...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAATGGATGGCAGCACTCTaGACATCACTTCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKWMAAL*TSLLAP Trigger: AGGAGCCAGAAGTGATGTTCAGAGTGCTGCCATCCA...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAATATTTCCAATCCAGATaGCAGAGGGCTGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKYFQSR*QRAGGA Trigger: GGCTCCTCCAGCCCTCTGTCATCTGGATTGGAAATA...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGTGCACACAGCTTGGACCAACATCTTCTTGCCCATGCCAGAGGGTCCCCGGCTGAATTTCTGCTaGCCATTCTCCCAAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVHTAWTNIFLPMPEGPRLNFC*PFSQIL Trigger: GAGGATTTGGGAGAATGGGCAGCAGAAATTCAGCCG...GGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCAGGTCTAGTCTCACCTaGTCTGGAGTCTTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPRSSLT*SGVLSA Trigger: TGCAGACAAGACTCCAGAGCAGGTGAGACTAGACCT...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCTGGCACCAGTTTCTGTaGACACAGCTTGGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPWHQFL*TQLGPT Trigger: TGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCA...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | CACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGGTTCGAGCACAGATaGCTCTTTTTCCAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTLNSGGTCHSPHHTPQQRFEHR*LFFQHL Trigger: GAGGTGCTGGAAAAAGAGCCATCTGTGCTCGAACCT...TTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAGGTTCGAGCACAGATaGCTCTTTTTCCAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLRFEHR*LFFQHL Trigger: GAGGTGCTGGAAAAAGAGCCATCTGTGCTCGAACCT...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCTCCTGAGAAACCAGTaGCTCCAGTCTGTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPLLRNQ*LQSVQD Trigger: ATCCTGAACAGACTGGAGCCACTGGTTTCTCAGGAG...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCATAACAATGGCTCCCTaGTCCCGGCTGAATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPITMAP*SRLNFC Trigger: GCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTAT...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCGTCCACAGACCGGTCTaGGGTCAGATCTTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPVHRPV*GQIFFL Trigger: AAGGAAAAAGATCTGACCCCAGACCGGTCTGTGGAC...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCATGGTATGTATATCATaGGAGCCCAGCCGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSMVCIS*EPSRRT Trigger: GGTTCTTCGGCTGGGCTCCCATGATATACATACCAT...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACTCTGTGCACACAGCTTaGACCAACATCTTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEAPAIHHITPHSKDSVHTA*TNIFLP Trigger: GGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGA...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCACAGGTCAAACAGGTTaGCACCAGTTTCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VTPLTLEAPAIHHITPHSTGQTG*HQFLCT Trigger: TGTGCACAGAAACTGGTGCCAACCTGTTTGACCTGT...GCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| 3UTR CAA 72 bp | GCCGGATATCAAACAGGGACGGCATGGGCATCTTGTTaGCCAAAGTCAGAGTGGACCCGAGATAGAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGYQTGTAWASC*PKSEWTRDRGN Trigger: ATTGCCTCTATCTCGGGTCCACTCTGACTTTGGCAAACAAGATGCCCATGCCGTCCCTGTTTGATATCCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CAA 72 bp | AACATCCAGACTCGAGGTCAGCTGTACTCCCCTTCCTaGGCTCTCTATCATCCGTTTCCAGAGCACATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NIQTRGQLYSPS*ALYHPFPEHIA Trigger: CGCTATGTGCTCTGGAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACAGCTGACCTCGAGTCTGGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | ACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACAGGTAGGATCCACCTaGAGCCTCATCTGGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TLNSGGTCHSPHHTPQQRQVGST*SLIWII Trigger: GATTATCCAGATGAGGCTTCAGGTGGATCCTACCTG...TCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACCACCAATGTAGTCACTaGGTGTCACTAGTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEAPAIHHITPHSKDHQCSH*VSLVQT Trigger: AGTCTGCACTAGTGACACTCAGTGACTACATTGGTG...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGGCAATCTCCATCTCCACTTaGTTTCTTTTCTCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSHLGLYVSVTPLTLEAISIST*FLFSSR Trigger: CCGGGAGGAGAAAAGAAAGCAAGTGGAGATGGAGAT...TGCCTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGGCATTCTTTCTACTCTCCTaGGCTTGTGCTTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSHLGLYVSVTPLTLEAFFLLS*ACASRS Trigger: AGACCTGGAAGCACAAGCCCAGGAGAGTAGAAAGAA...TGCCTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCTGCTCCGTTCTTTCCTaGGTATTTGCCCATCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTPLTLEAPAIHHITPCSVLS*VFAHQV Trigger: AACCTGATGGGCAAATACCCAGGAAAGAACGGAGCA...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTGTCGATCCTGCTCAATaGGTTTTCTCTGGAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRALRSHLGLYVSVTPLTVDPAQ*VFSGGN Trigger: GTTACCTCCAGAGAAAACGCATTGAGCAGGATCGAC...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR GCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAACTCTGGAGTCTTGTCTaGAAAGATCAGGTAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKLWSLV*KDQVGS Trigger: GGATCCTACCTGATCTTTGCAGACAAGACTCCAGAG...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAACCAGCTGAAAATATTTaGGGATGGGAACCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKPAENI*GWEPPG Trigger: ACCTGGAGGTTCCCATCCCCAAATATTTTCAGCTGG...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCAAGTGCCCCACAAACTCAGAGGCAACCAGTGGCTTCTTGATAAGTTGATAACAATGGCTCCCTaGTCCCGGCTGAATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCQVPHKLRGNQWLLDKLITMAP*SRLNFC Trigger: GCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTAT...CAACTTATCAAGAAGCCACTGGTTGCCTCTGAGTTTGTGGGGCACTTGGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACTTCCCTATGGCTTCCTaGAATTCCTCTTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTLEAPAIHHITPHSKDFPMAS*NSSSFS Trigger: GGAAAAGGAAGAGGAATTCCAGGAAGCCATAGGGAA...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTACGTAGGTCTTCCCTATaGCTTCCTGGAATTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRRALRSHLGLYVSVTPLRRSSL*LPGIPL Trigger: AAGAGGAATTCCAGGAAGCCATAGGGAAGACCTACG...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGTCTGAACATCACTTCTaGCTCCTTCTTGACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRSHLGLYVSVTPLTLESEHHF*LLLDLF Trigger: GAAAAGGTCAAGAAGGAGCCAGAAGTGATGTTCAGA...CTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACCGTCCTTTCTTCCTTTaGGACCTTCTTGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKSPQEPPGPLCVCHTLNRPFFL*DLLVEG Trigger: ACCTTCTACAAGAAGGTCCCAAAGGAAGAAAGGACG...GTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | ACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAATGTACTCCCCTTCCTTaGCTCTCTATCATCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPLTLEAPAIHHITPHSKCTPLP*LSIIRF Trigger: GAAACGGATGATAGAGAGCCAAGGAAGGGGAGTACA...TTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | CACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAACTCAGAGGCAACCAGTaGCTTCTTGATAAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTLNSGGTCHSPHHTPQQLRGNQ*LLDKLK Trigger: CTTCAACTTATCAAGAAGCCACTGGTTGCCTCTGAG...TTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| 3UTR CAA 72 bp | CGGAGGGTCTCAGAGTCAAAGTTCTGGCTGGGATGCTaGTTGTCATACCGGCTCTTCCACACACTTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVSESKFWLGC*LSYRLFHTLVY Trigger: ATACACAAGTGTGTGGAAGAGCCGGTATGACAACAAGCATCCCAGCCAGAACTTTGACTCTGAGACCCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| 3UTR CAA 72 bp | TGTGCTCCGTTCTTTCCTGGGTATTTGCCCATCAGGTaGTCAGGTGACAGGTCAAACAGGTTGGCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAPFFPGYLPIR*SGDRSNRLAPV Trigger: AACTGGTGCCAACCTGTTTGACCTGTCACCTGACAACCTGATGGGCAAATACCCAGGAAAGAACGGAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTGCTTTGTGGCCCTCATaGGGTCTTTCTTTATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLALWPS*GLSLFF Trigger: AAAGAATAAAGAAAGACCTCATGAGGGCCACAAAGC...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAAATCAGGCCTGGGAATaGAGAGAATACGCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRRALRSHLGLYVSVTPLNQAWE*REYAHR Trigger: TCTATGAGCGTATTCTCTTCATTCCCAGGCCTGATT...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTTGGCACCAGTTTCTGTGCACACAGCTTGGACCAACATCTTCTTGCCCATCCAGCTGAAAATATTTaGGGATGGGAACCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVGTSFCAHSLDQHLLAHPAENI*GWEPPG Trigger: ACCTGGAGGTTCCCATCCCCAAATATTTTCAGCTGG...ATGGGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAAACTGGTGCCAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCGACCAGTAAGGGCATaGCATTCAATAAACCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRALRSHLGLYVSVTPLTRPVRA*HSINHC Trigger: ACAATGGTTTATTGAATGCCATGCCCTTACTGGTCG...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| 3UTR CAA 72 bp | GAATGCTATGGGATCATTCAAGACACTCTTCCTGATTaGTCCTGGTACCTTCTCTTCTCTCAGGGAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECYGIIQDTLPD*SWYLLFSQGNG Trigger: CCCATTTCCCTGAGAGAAGAGAAGGTACCAGGACAAATCAGGAAGAGTGTCTTGAATGATCCCATAGCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| 3UTR CAA 72 bp | TATTCCTCATGCCCAGCATTAATCACAGGAATAGATTaGGATGGCAGCACTCTGAACATCACTTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSSCPALITGID*DGSTLNITSGS Trigger: GGAGCCAGAAGTGATGTTCAGAGTGCTGCCATCCAAATCTATTCCTGTGATTAATGCTGGGCATGAGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| CDS TCA 90 bp | CCAGGCAGTGGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCCTTaGGCTCCAGTACACGTCCCGCCACACCGTCCAGAAGGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSGSRTGQRALARP*APVHVPPHRPEGAA Trigger: TGCGGCGCCTTCTGGACGGTGTGGCGGGACGTGTACTGGAGCTCAAGGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCCACTGCCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS CCA 90 bp | TCCCGCCACACCGTCCAGAAGGCGCCGCAGCAACCGACGCTTCTGTaGCTGTACCATCTGGTCGTAGGCCAGGTTGAAGCGGCGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRHTVQKAPQQPTLL*LYHLVVGQVEAAQQ Trigger: CTGCTGCGCCGCTTCAACCTGGCCTACGACCAGATGGTACAGCCACAGAAGCGTCGGTTGCTGCGGCGCCTTCTGGACGGTGTGGCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS CCA 90 bp | TCTGCCGGGGTCAGCTTGAGATCCTGCAGTACTCGGTCCAGGCAGTaGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCCTTGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SAGVSLRSCSTRSRQ*VSHRSTRTSSSLSS Trigger: GGAGCTCAAGGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS GCA 90 bp | GCAGTCCGGCTCAATCCTCGAAGATTCGGGGTCAGCTTGAGATCCTaGAGTACTCGGTCCAGGCAGTGGGTCTCGCACAGGTCAACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AVRLNPRRFGVSLRS*STRSRQWVSHRSTR Trigger: GCGCGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAGCCGGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS CCA 90 bp | CTGGAAGCTCTGCCGCTCTCGGCTGGGCACAGGTTCGAGCACAGATaGCTCTTTTTCCAGCACCTCTTCGAGAGTCACGTGGGAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LEALPLSAGHRFEHR*LFFQHLFESHVGGL Trigger: GAGGCCTCCCACGTGACTCTCGAAGAGGTGCTGGAAAAAGAGCCATCTGTGCTCGAACCTGTGCCCAGCCGAGAGCGGCAGAGCTTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS TCA 90 bp | GCAACCGACGCTTCTGTGGCTGTACCATCTGGTCGTAGGCCAGGTTaGAGCGGCGCAGCAGCCCCAGGTAGTACAGGTAAAGCACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATDASVAVPSGRRPG*SGAAAPGSTGKARR Trigger: TCTCCGTGCTTTACCTGTACTACCTGGGGCTGCTGCGCCGCTTCAACCTGGCCTACGACCAGATGGTACAGCCACAGAAGCGTCGGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS TCA 90 bp | TCAGAGCCGCAGTCCGGCTCAATCCTCGAAGATTCGGGGTCAGCTTaGGATCCTGCAGTACTCGGTCCAGGCAGTGGGTCTCGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEPQSGSILEDSGSA*DPAVLGPGSGSRTG Trigger: ACCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAGCCGGACTGCGGCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS CCA 90 bp | AGATTCGGGGTCAGCTTGAGATCCTGCAGTACTCGGTCCAGGCAGTaGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCCTTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFGVSLRSCSTRSRQ*VSHRSTRTSSSLSS Trigger: GGAGCTCAAGGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS GCA 90 bp | ATGAAAGTGGCTCGTAGTCGGCCTTGCCTGGCCCGCTCAGCACTTTaGACTAGAATCAGAGCCGCAGTCCGGCTCAATCCTCGAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: MKVARSRPCLARSAL*TRIRAAVRLNPRRF Trigger: GAATCTTCGAGGATTGAGCCGGACTGCGGCTCTGATTCTAGTGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTACGAGCCACTTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS-3UTR CAA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTTGGACCAACATCTTCTaGCCCATGCCAGAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLWTNIF*PMPEGP Trigger: GGGACCCTCTGGCATGGGCAAGAAGATGTTGGTCCA...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS GCA 90 bp | TCCTCTTTCCTGATTTCTCGCATGAAAGTGGCTCGTAGTCGGCCTTaGCTGGCCCGCTCAGCACTTTGCACTAGAATCAGAGCCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFLISRMKVARSRP*LARSALCTRIRAAV Trigger: GACTGCGGCTCTGATTCTAGTGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTACGAGCCACTTTCATGCGAGAAATCAGGAAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS GCA 90 bp | CAGTGGCTCCAGTCTGTTCAGGATATCAGCCAGCATCTGCTGACGTaGCTTCACGGCGCTGGACTGCTCCAGCTGAAAATATTTGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: QWLQSVQDISQHLLT*LHGAGLLQLKIFGD Trigger: ATCCCCAAATATTTTCAGCTGGAGCAGTCCAGCGCCGTGAAGGCACGTCAGCAGATGCTGGCTGATATCCTGAACAGACTGGAGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CCA 90 bp | TGTTCAGGATATCAGCCAGCATCTGCTGACGTGCCTTCACGGCGCTaGACTGCTCCAGCTGAAAATATTTGGGGATGGGAACCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSGYQPASADVPSRR*TAPAENIWGWEPPG Trigger: ACCTGGAGGTTCCCATCCCCAAATATTTTCAGCTGGAGCAGTCCAGCGCCGTGAAGGCACGTCAGCAGATGCTGGCTGATATCCTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTCTGGAGTTTTTCTTTGGAGACTaGAGGGGTCTGGTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALRSHLGLYVSVTPLTLEFFFGD*RGLVSS Trigger: GGAGGAGACCAGACCCCTCAAGTCTCCAAAGAAAAA...CTCCAGAGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTGACGGCATGGGCATCTaGTTTGCCAAAGTCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLDGMGI*FAKVRV Trigger: CACTCTGACTTTGGCAAACAAGATGCCCATGCCGTC...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | GAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACGACAGGTCAAACAGGTaGGCACCAGTTTCTGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: EKSPQEPPGPLCVCHTLNDRSNR*APVSVH Trigger: GTGCACAGAAACTGGTGCCAACCTGTTTGACCTGTC...GTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTATACTGGATCCAGCCTaGCCAAGTGCCCCACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLILDPA*PSAPQT Trigger: AGTTTGTGGGGCACTTGGCAAGGCTGGATCCAGTAT...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS GCA 90 bp | TCCTTCTGTATAACAATGGCTCCCTGGTCCCGGCTGAATTTCTGCTaGCCATTCTCCCAAATCCTCCGATCCCGTTCCTCCTCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFCITMAPWSRLNFC*PFSQILRSRSSSFL Trigger: CAGGAAAGAGGAGGAACGGGATCGGAGGATTTGGGAGAATGGGCAGCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTATACAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| CDS GCA 90 bp | GTCTCCTTCTGTATAACAATGGCTCCCTGGTCCCGGCTGAATTTCTaGTGCCCATTCTCCCAAATCCTCCGATCCCGTTCCTCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VSFCITMAPWSRLNF*CPFSQILRSRSSSF Trigger: GAAAGAGGAGGAACGGGATCGGAGGATTTGGGAGAATGGGCAGCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTATACAGAAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTGCATGGGCATCTTGTTaGCCAAAGTCAGAGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: RRALRSHLGLYVSVTPLTAWASC*PKSEWT Trigger: GGTCCACTCTGACTTTGGCAAACAAGATGCCCATGC...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | GAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTTCTGTGCACACAGCTaGGACCAACATCTTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EKSPQEPPGPLCVCHTLNFCAHS*DQHLLA Trigger: GGCAAGAAGATGTTGGTCCAAGCTGTGTGCACAGAA...GTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS TCA 90 bp | ACTAGAATCAGAGCCGCAGTCCGGCTCAATCCTCGAAGATTCTCCTaGGAAACCAGTGGCTCCAGTCTGTTCAGGATATCAGCCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: TRIRAAVRLNPRRFS*ETSGSSLFRISASI Trigger: GATGCTGGCTGATATCCTGAACAGACTGGAGCCACTGGTTTCTCAGGAGAATCTTCGAGGATTGAGCCGGACTGCGGCTCTGATTCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS TCA 90 bp | CACCTGCTCTGGAGTCTTGTCTGCAAAGATCAGGTAGGATCCACCTaGAGCCTCATCTGGATAATCAGGGAACCGACCAGTAAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: HLLWSLVCKDQVGST*SLIWIIREPTSKGM Trigger: CATGCCCTTACTGGTCGGTTCCCTGATTATCCAGATGAGGCTTCAGGTGGATCCTACCTGATCTTTGCAGACAAGACTCCAGAGCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | GTGTCTGTCACACCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCTCCTCAGCCTCCAGTaGGTCCTTGGTAAATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VSVTPLTLEAPAIHHITPLLSLQ*VLGKFH Trigger: ATGAAATTTACCAAGGACCAACTGGAGGCTGAGGAG...GGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGGTGTGACAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | CAAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTTCTTCTTCTTCTCCTTaGTCAATCTGGCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEKSPQEPPGPLCVCHTLSSSSP*SIWPPQ Trigger: CTGAGGAGGCCAGATTGACAAAGGAGAAGAAGAAGA...AAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | CCCTTAACTCTGGAGGCACCTGCCATTCACCACATCACACCCCACAGCAAAGACATCACAGGAATAGATTaGGATGGCAGCACTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLTLEAPAIHHITPHSKDITGID*DGSTLN Trigger: GTTCAGAGTGCTGCCATCCAAATCTATTCCTGTGAT...GTCTTTGCTGTGGGGTGTGATGTGGTGAATGGCAGGTGCCTCCAGAGTTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTTCGTCCTTTCTTCCTTaGGGACCTTCTTGTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRALRSHLGLYVSVTPLTSSFLP*GPSCRR Trigger: CCTTCTACAAGAAGGTCCCAAAGGAAGAAAGGACGA...AGTTAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS TCA 90 bp | AACCGACCAGTAAGGGCATGGCATTCAATAAACCATTGTCGTATTTaGTCCTTCATCCTCTCCTTCATGTCGGGTCCCTCGGTCTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRPVRAWHSINHCRI*SFILSFMSGPSVSV Trigger: CACGGAGACCGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCATGCCCTTACTGGTCGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTAACTTCTGGCTCCTTCTaGACCTTTTCTTCCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: KRRALRSHLGLYVSVTPLTSGSF*TFSSLT Trigger: AGTCAAGGAAGAAAAGGTCAAGAAGGAGCCAGAAGT...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGAGCCCTCAGGAGCCACCTGGGCCTTTATGTGTCTGTCACACCCTTATTTCCCAGTGGAGTCTaGAAAAACCATTCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRRALRSHLGLYVSVTPLFPSGV*KNHSLR Trigger: CCTTAAGGAATGGTTTTTCAAGACTCCACTGGGAAA...TAAGGGTGTGACAGACACATAAAGGCCCAGGTGGCTCCTGAGGGCTCTTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS CAA 90 bp | TCCAGGCAGTGGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCCTaGAGCTCCAGTACACGTCCCGCCACACCGTCCAGAAGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRQWVSHRSTRTSSS*SSSTRPATPSRRRR Trigger: GCGGCGCCTTCTGGACGGTGTGGCGGGACGTGTACTGGAGCTCAAGGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCCACTGCCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS GCA 72 bp | GGAACCTCCAGGTCTGCCGGGGTCAGCTTGAGATCCTaGAGTACTCGGTCCAGGCAGTGGGTCTCGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTSRSAGVSLRS*STRSRQWVSHR Trigger: CCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGGCAGACCTGGAGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS TCA 72 bp | GGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCCTTaGGCTCCAGTACACGTCCCGCCACACCGTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSRTGQRALARP*APVHVPPHRPE Trigger: TTCTGGACGGTGTGGCGGGACGTGTACTGGAGCTCAAGGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS TCA 72 bp | TGGGGATGGGAACCTCCAGGTCTGCCGGGGTCAGCTTaGGATCCTGCAGTACTCGGTCCAGGCAGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WGWEPPGLPGSA*DPAVLGPGSGS Trigger: AGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGGCAGACCTGGAGGTTCCCATCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CCA 72 bp | ACCGTCCAGAAGGCGCCGCAGCAACCGACGCTTCTGTaGCTGTACCATCTGGTCGTAGGCCAGGTTGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TVQKAPQQPTLL*LYHLVVGQVEA Trigger: CGCTTCAACCTGGCCTACGACCAGATGGTACAGCCACAGAAGCGTCGGTTGCTGCGGCGCCTTCTGGACGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS GCA 72 bp | GCTCGTAGTCGGCCTTGCCTGGCCCGCTCAGCACTTTaGACTAGAATCAGAGCCGCAGTCCGGCTCAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSRPCLARSAL*TRIRAAVRLNP Trigger: AGGATTGAGCCGGACTGCGGCTCTGATTCTAGTGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTACGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS CCA 72 bp | GTCAGCTTGAGATCCTGCAGTACTCGGTCCAGGCAGTaGGTCTCGCACAGGTCAACGCGCACTAGCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLRSCSTRSRQ*VSHRSTRTSSS Trigger: GGACGAGCTAGTGCGCGTTGACCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS CAA 90 bp | ATCAGAGCCGCAGTCCGGCTCAATCCTCGAAGATTCGGGGTCAGCTaGAGATCCTGCAGTACTCGGTCCAGGCAGTGGGTCTCGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRAAVRLNPRRFGVS*RSCSTRSRQWVSHR Trigger: CCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAGCCGGACTGCGGCTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS CCA 72 bp | CCTTCACGGCGCTGGACTGCTCCAGCTGAAAATATTTaGGGATGGGAACCTCCAGGTCTGCCGGGGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRRWTAPAENI*GWEPPGLPGSA Trigger: AGCTGACCCCGGCAGACCTGGAGGTTCCCATCCCCAAATATTTTCAGCTGGAGCAGTCCAGCGCCGTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CAA 72 bp | GCAGTCCGGCTCAATCCTCGAAGATTCGGGGTCAGCTaGAGATCCTGCAGTACTCGGTCCAGGCAGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AVRLNPRRFGVS*RSCSTRSRQWV Trigger: GACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAGCCGGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS TCA 72 bp | GCTTCTGTGGCTGTACCATCTGGTCGTAGGCCAGGTTaGAGCGGCGCAGCAGCCCCAGGTAGTACAGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASVAVPSGRRPG*SGAAAPGSTGK Trigger: TTTACCTGTACTACCTGGGGCTGCTGCGCCGCTTCAACCTGGCCTACGACCAGATGGTACAGCCACAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS TCA 72 bp | CAGTCCGGCTCAATCCTCGAAGATTCGGGGTCAGCTTaGGATCCTGCAGTACTCGGTCCAGGCAGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSGSILEDSGSA*DPAVLGPGSGS Trigger: AGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAGCCGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS GCA 72 bp | CTCAATCCTCGAAGATTCGGGGTCAGCTTGAGATCCTaGAGTACTCGGTCCAGGCAGTGGGTCTCGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LNPRRFGVSLRS*STRSRQWVSHR Trigger: CCTGTGCGAGACCCACTGCCTGGACCGAGTACTGCAGGATCTCAAGCTGACCCCGAATCTTCGAGGATTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198887.2 |
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| CDS GCA 72 bp | ATAACAATGGCTCCCTGGTCCCGGCTGAATTTCTGCTaGCCATTCTCCCAAATCCTCCGATCCCGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ITMAPWSRLNFC*PFSQILRSRSS Trigger: GGAGGAACGGGATCGGAGGATTTGGGAGAATGGGCAGCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS GCA 72 bp | CAGTCTGTTCAGGATATCAGCCAGCATCTGCTGACGTaGCTTCACGGCGCTGGACTGCTCCAGCTGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: QSVQDISQHLLT*LHGAGLLQLKI Trigger: TATTTTCAGCTGGAGCAGTCCAGCGCCGTGAAGGCACGTCAGCAGATGCTGGCTGATATCCTGAACAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS GCA 72 bp | CTGATTTCTCGCATGAAAGTGGCTCGTAGTCGGCCTTaGCTGGCCCGCTCAGCACTTTGCACTAGAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LISRMKVARSRP*LARSALCTRIR Trigger: TCTGATTCTAGTGCAAAGTGCTGAGCGGGCCAGGCAAGGCCGACTACGAGCCACTTTCATGCGAGAAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088302.10 ENSMUST00000198887.2 ENSMUST00000200634.5 |
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| CDS CCA 72 bp | TATCAGCCAGCATCTGCTGACGTGCCTTCACGGCGCTaGACTGCTCCAGCTGAAAATATTTGGGGATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: YQPASADVPSRR*TAPAENIWGWE Trigger: TTCCCATCCCCAAATATTTTCAGCTGGAGCAGTCCAGCGCCGTGAAGGCACGTCAGCAGATGCTGGCTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CCA 72 bp | CTGGCTGGTGTCTCCTTCTGTATAACAATGGCTCCCTaGTCCCGGCTGAATTTCTGCTGCCCATTCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LAGVSFCITMAP*SRLNFCCPFSQ Trigger: TTGGGAGAATGGGCAGCAGAAATTCAGCCGGGACCAGGGAGCCATTGTTATACAGAAGGAGACACCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200634.5 |
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| CDS TCA 72 bp | AGAGCCGCAGTCCGGCTCAATCCTCGAAGATTCTCCTaGGAAACCAGTGGCTCCAGTCTGTTCAGGATATCA | + |
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Preference number: 6 (lower is better) Translates to: RAAVRLNPRRFS*ETSGSSLFRIS Trigger: TGATATCCTGAACAGACTGGAGCCACTGGTTTCTCAGGAGAATCTTCGAGGATTGAGCCGGACTGCGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CCA 72 bp | CCGGCTCAATCCTCGAAGATTCTCCTGAGAAACCAGTaGCTCCAGTCTGTTCAGGATATCAGCCAGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: PAQSSKILLRNQ*LQSVQDISQHL Trigger: CAGATGCTGGCTGATATCCTGAACAGACTGGAGCCACTGGTTTCTCAGGAGAATCTTCGAGGATTGAGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088302.10 ENSMUST00000200634.5 |
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| CDS CAA 90 bp | GAACCGACCAGTAAGGGCATGGCATTCAATAAACCATTGTCGTATTaGATCCTTCATCCTCTCCTTCATGTCGGGTCCCTCGGTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: EPTSKGMAFNKPLSY*ILHPLLHVGSLGLR Trigger: ACGGAGACCGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCATGCCCTTACTGGTCGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS TCA 72 bp | GTAAGGGCATGGCATTCAATAAACCATTGTCGTATTTaGTCCTTCATCCTCTCCTTCATGTCGGGTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VRAWHSINHCRI*SFILSFMSGPS Trigger: CGAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCATGCCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS CAA 72 bp | AGTAAGGGCATGGCATTCAATAAACCATTGTCGTATTaGATCCTTCATCCTCTCCTTCATGTCGGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKGMAFNKPLSY*ILHPLLHVGSL Trigger: GAGGGACCCGACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCATGCCCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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| CDS CAA 72 bp | GAACCGACCAGTAAGGGCATGGCATTCAATAAACCATaGTCGTATTTGATCCTTCATCCTCTCCTTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: EPTSKGMAFNKP*SYLILHPLLHV Trigger: GACATGAAGGAGAGGATGAAGGATCAAATACGACAATGGTTTATTGAATGCCATGCCCTTACTGGTCGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088302.10 |
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