Pregenerated sensors for IQCA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026301Ensembl transcript IDs: ENSMUST00000113094.9, ENSMUST00000189011.2, ENSMUST00000212394.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGTGGGCTTCCCCAGGTaGGCAGGGGTGAGCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VILVLTNTGKCESWVECGVGFPR*AGVSLS Trigger: GGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCAC...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR-3UTR CCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTCTCTCCCTGACAAGCTaGGGCCGACATCATCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: DNRTQWSGYSALEWLLSALSLTS*GRHHLK Trigger: TTTGAGATGATGTCGGCCCCAGCTTGTCAGGGAGAG...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR-3UTR CCA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTCAGGGTACAGTGCCTTaGAGTGGCTGCTCTCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: NTGKCESWVECGAQGKPTQGTVP*SGCSPL Trigger: AAGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTG...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR CCA 72 bp | AACCTGACTCTGGGAAGAAGCAGGTCCAGCTGCTACTaGCTTCACGGTGTTCATGGTCACTGCGTGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: NLTLGRSRSSCY*LHGVHGHCVDP Trigger: GGGATCCACGCAGTGACCATGAACACCGTGAAGCCAGTAGCAGCTGGACCTGCTTCTTCCCAGAGTCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| 3UTR GCA 72 bp | CCAAGTAACCTGACTCTGGGAAGAAGCAGGTCCAGCTaGTACTGGCTTCACGGTGTTCATGGTCACTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: PSNLTLGRSRSS*YWLHGVHGHCV Trigger: CACGCAGTGACCATGAACACCGTGAAGCCAGTAGCAGCTGGACCTGCTTCTTCCCAGAGTCAGGTTACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| 3UTR CCA 72 bp | AGGATAACAGAACACAGTGGTCAGGGTACAGTGCCTTaGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: RITEHSGQGTVP*SGCSPLSFSVG Trigger: GCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR CCA 72 bp | TTGGTGTGCAGCCTCCTGAAGGATAACAGAACACAGTaGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LVCSLLKDNRTQ*SGYSALEWLLS Trigger: GGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATCCTTCAGGAGGCTGCACACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR TCA 72 bp | TTTATTACCCACTTTGGGCTGTGTTGCCAAGTAACCTaGCTCTGGGAAGAAGCAGGTCCAGCTGCTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: FITHFGLCCQVT*LWEEAGPAATG Trigger: GCCAGTAGCAGCTGGACCTGCTTCTTCCCAGAGTCAGGTTACTTGGCAACACAGCCCAAAGTGGGTAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTGGGCTTCCCCAGGTGAGCAGGGGTGAGCCTCTCCCTGACAAGCTGAGGGCATGGGTTCTATaGCCACCTGGCGCAGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLCGLPQVSRGEPLPDKLRAWVL*PPGAEL Trigger: CAACTCTGCGCCAGGTGGCCATAGAACCCATGCCCT...CAGCTTGTCAGGGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCACAGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | CTTCTCTGTGGGCTTCCCCAGGTGAGCAGGGGTGAGCCTCTCCCTGACAAGCTGTGCCGGATCTGGTCCTaGAGATGCTCCTTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLCGLPQVSRGEPLPDKLCRIWS*RCSLMS Trigger: GGACATCAAGGAGCATCTTCAGGACCAGATCCGGCA...CAGCTTGTCAGGGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCACAGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR GCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTCTTTTGGTACACTCTaGAGAAGGGCTGGAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRSFGTL*RRAGAP Trigger: CGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTGGGCTTCCCCAGGTGAGCAGGGGTGAGCCTCTCCCTGACAAGCTGTTTTCAACCAGCTCCTaGTACAGCGACTCGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LLCGLPQVSRGEPLPDKLFSTSS*YSDSMV Trigger: GACCATCGAGTCGCTGTACCAGGAGCTGGTTGAAAA...CAGCTTGTCAGGGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCACAGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTCCAGCCAAAAGCAGTaGCTTTACCAAGGGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRSSQKQ*LYQGSS Trigger: AGAGCTCCCTTGGTAAAGTCACTGCTTTTGGCTGGA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTACTCTGCAGAAGGGCTaGAGCTCCGCGTCGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSATLQKG*SSASKG Trigger: ACCTTTCGACGCGGAGCTCCAGCCCTTCTGCAGAGT...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGGAATTGAGGGCTTCTTaGGTCTGGTGCCACATCTTA | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRELRAS*VWCHIL Trigger: TAAGATGTGGCACCAGACCCAAGAAGCCCTCAATTC...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTTGACCTTCAGAGCCTaGATCAGCAGGCCTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRLTFRA*ISRPFS Trigger: TGAAAAAGGCCTGCTGATCCAGGCTCTGAAGGTCAA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGAAGGAAAAGACTTGGTaGCATCTTCCACTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRKEKTW*HLPLLI Trigger: GATGAGGAGTGGAAGATGTCACCAAGTCTTTTCCTT...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | AGGTCCAGCTGCTACTGGCTTCACGGTGTTCATGGTCACTGCGTGGATCCCATCTCCAGCCAAAAGCAGTaGCTTTACCAAGGGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSSCYWLHGVHGHCVDPISSQKQ*LYQGSS Trigger: AGAGCTCCCTTGGTAAAGTCACTGCTTTTGGCTGGA...GATGGGATCCACGCAGTGACCATGAACACCGTGAAGCCAGTAGCAGCTGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS-3UTR TCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAACACACCACGGAAGGCTaGAGCTGGCGAGCCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQHTTEG*SWRATL Trigger: CAAGGTGGCTCGCCAGCTTCAGCCTTCCGTGGTGTG...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR GCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTCATCTCCTTGGCTCTaGACTCCTGAAGGAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRSSPWL*TPEGKS Trigger: AGATTTTCCTTCAGGAGTGCAGAGCCAAGGAGATGA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGGTCACTTGTTTGGACTaGACAATGGCATCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRVTCLD*TMASLT Trigger: AGTCAGTGATGCCATTGTCCAGTCCAAACAAGTGAC...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTCTCCGTCTTCCTCATTaGGGTAGTCTGGGAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSALRLPH*GSLGMC Trigger: GCACATTCCCAGACTACCCCAATGAGGAAGACGGAG...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTGGGCTTCCCCAGGTGAGCAGGGGTGAGCCTCTCCCTGACAAGCTGCCCCATAACCTGTTCTaGGGTCTTATTGGAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLCGLPQVSRGEPLPDKLPHNLF*GLIGKD Trigger: ATCTTTTCCAATAAGACCCCAGAACAGGTTATGGGG...CAGCTTGTCAGGGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCACAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGCTCCTTGATCAGTTCTaGGTCATAGTCTTGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRLLDQF*VIVLRE Trigger: TTCCCTCAAGACTATGACCCAGAACTGATCAAGGAG...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTTTCTTTTGCCGGGGTaGGATTTCCATCTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRFLLPG*DFHLSV Trigger: AACAGAGAGATGGAAATCCCACCCCGGCAAAAGAAA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTCTTCAGGTCCTCCTTaGTATTTACTAAGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRSSGPP*YLLRLP Trigger: AGGAAGCCTTAGTAAATATCAAGGAGGACCTGAAGA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGACCAGGAGGGAGGGCATaGGTTCTATGGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VILVLTNTGKCESWVECGPGGRA*VLWPPG Trigger: GCCAGGTGGCCATAGAACCCATGCCCTCCCTCCTGG...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGAAGCAGGTCCAGCTGCTACTGGCTTCACGGTGTTCATGGTCACTGCTGTCAGATGGAGGCTTaGAGACCAAGTGTATCATCA | + |
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Preference number: 4 (lower is better) Translates to: LGRSRSSCYWLHGVHGHCCQMEA*RPSVSS Trigger: TGATGATACACTTGGTCTTCAAGCCTCCATCTGACA...GCAGTGACCATGAACACCGTGAAGCCAGTAGCAGCTGGACCTGCTTCTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS-3UTR CCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTTTTTCTTCCTCCTCTTaGGTGGCTATGATATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSAFSSSS*VAMISP Trigger: GGGGGATATCATAGCCACCCAAGAGGAGGAAGAAAA...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTCCTTCCTCCATCAATTaGAGGAAAAGACTTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSAPSSIN*RKRLGD Trigger: GTCACCAAGTCTTTTCCTTCAATTGATGGAGGAAGG...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTATTGAAGAGAGGGGATaGTTTCATACCCAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSAIEERG*FHTQED Trigger: GTCTTCCTGGGTATGAAACCATCCCCTCTCTTCAAT...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAACGAAAGGTCGGTGTGTaGTCCCCACAATCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPERKVGV*SPQSGS Trigger: GGATCCTGATTGTGGGGACCACACACCGACCTTTCG...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTCCTTCAGGAAATACCTaGGTATGGGGACATCCAACT | + |
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Preference number: 4 (lower is better) Translates to: NTGKCESWVECGAQGKPTPSGNT*VWGHPT Trigger: AGTTGGATGTCCCCATACCCAGGTATTTCCTGAAGG...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGCACGCTCCGCTATCTaGATCAGTTTCACAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQARSAI*ISFTAS Trigger: AGAGGCTGTGAAACTGATCCAGATAGCGGAGCGTGC...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| 3UTR CAA 72 bp | GTCTTGGATGGAGTTTATTACCCACTTTGGGCTGTGTaGCCAAGTAACCTGACTCTGGGAAGAAGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLDGVYYPLWAV*PSNLTLGRSRS Trigger: GGACCTGCTTCTTCCCAGAGTCAGGTTACTTGGCAACACAGCCCAAAGTGGGTAATAAACTCCATCCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS-3UTR TCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAAATTCCTGCACTCAATaGACCACTGCCGGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQNSCTQ*TTAGSG Trigger: ACCAGATCCGGCAGTGGTTCATTGAGTGCAGGAATT...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAATGTAATCCGAGAGGTTaGCCTTCAGAGCCTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQCNPRG*PSEPGS Trigger: TGATCCAGGCTCTGAAGGTCAACCTCTCGGATTACA...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAACAGCTTCATCTCCTTaGCTCTGCACTCCTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQTASSP*LCTPEG Trigger: TCCTTCAGGAGTGCAGAGCCAAGGAGATGAAGCTGT...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GATGGAGTTTATTACCCACTTTGGGCTGTGTTGCCAAGTAACCTGACTCTGGGACCTGCAGATGTCAGATaGAGGCTTGAAGACCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: DGVYYPLWAVLPSNLTLGPADVR*RLEDQV Trigger: CACTTGGTCTTCAAGCCTCCATCTGACATCTGCAGG...TCCCAGAGTCAGGTTACTTGGCAACACAGCCCAAAGTGGGTAATAAACTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS-3UTR GCA 90 bp | GTTGTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTAAGGGAGCTCTCTCATaGACTTCTGCAGACCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VVILVLTNTGKCESWVECKGALS*TSADPR Trigger: TCTGGGGTCTGCAGAAGTGCATGAGAGAGCTCCCTT...ACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAAAGGGCTTCTTGGGTCTaGTGCCACATCTTATTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPERASWV*CHILLY Trigger: GTACAATAAGATGTGGCACCAGACCCAAGAAGCCCT...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAATCTCTCTTCCCTTTATaGCTTCCAACCTCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPESLFPL*LPTSPS Trigger: TGAAGGAGAGGTTGGAAGTCATAAAGGGAAGAGAGA...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR GCA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTTTTCCTTTTCTTTGTTaGCAACTGTTAGTGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: DNRTQWSGYSALEWLLSAFPFLC*QLLVTR Trigger: TCTTGTCACTAACAGTTGGCAACAAAGAAAAGGAAA...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGAGTGCCGCCAACTTaGTGTCTAATAATCTATGTC | + |
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Preference number: 4 (lower is better) Translates to: LVLTNTGKCESWVECGAQGVPPT*CLIIYV Trigger: GACATAGATTATTAGACACCAAGTTGGCGGCACTCC...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGATGTTCAAGGAATTGGTaGGCTTACCTCCATTGCGTA | + |
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Preference number: 4 (lower is better) Translates to: VILVLTNTGKCESWVECGCSRNW*AYLHCV Trigger: TACGCAATGGAGGTAAGCTCACCAATTCCTTGAACA...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR GCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAAGCTTCTTGGGTCTGGTaGCACATCTTATTGTACATT | + |
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Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPEASWVW*HILLYI Trigger: AATGTACAATAAGATGTGGCACCAGACCCAAGAAGC...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAAACCAAAATGATCTTTTaGTACACTCTGCAGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPETKMIF*YTLQKG Trigger: GCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGT...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGATCCACAGAACATATCTaGAAGCATAGTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VILVLTNTGKCESWVECGSTEHI*KHSQVW Trigger: CCAGACCTGACTATGCTTCCAGATATGTTCTGTGGA...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR TCA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAACTCCATTGCGTAGAATaGTTTCTTTCCACAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QVMVMAVRDILLGVQPPELHCVE*FLSTEH Trigger: ATGTTCTGTGGAAAGAAATCATTCTACGCAATGGAG...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR GCA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGACAAAGCTATACTCTTTaGGGCATATTTCACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VILVLTNTGKCESWVECGQSYTL*GIFHRE Trigger: CTCCCTGTGAAATATGCCGCAAAGAGTATAGCTTTG...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
||
| CDS-3UTR TCA 90 bp | GTTGTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTAAGGTGGCTAACATCTaGAAGACTAGGACCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVILVLTNTGKCESWVECKVANI*KTRTLF Trigger: AAACAAGGTCCTAGTCTTTCAGATGTTAGCCACCTT...ACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CCA 90 bp | GTTGTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGATTTGTCACTTGTTTaGACTGGACAATGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVILVLTNTGKCESWVECDLSLV*TGQWHH Trigger: GTGATGCCATTGTCCAGTCCAAACAAGTGACAAATC...ACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTATCTGCAGGCCGGTTTaGCCCGGGTACTTCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: DNRTQWSGYSALEWLLSAICRPV*PGYFPA Trigger: CGCTGGGAAGTACCCGGGCAAAACCGGCCTGCAGAT...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | CTTTGGGCTGTGTTGCCAAGTAACCTGACTCTGGGAAGAAGCAGGTCCAGCTGCATCTGCAGGCCGGTTTaGCCCGGGTACTTCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LWAVLPSNLTLGRSRSSCICRPV*PGYFPA Trigger: CGCTGGGAAGTACCCGGGCAAAACCGGCCTGCAGAT...GCAGCTGGACCTGCTTCTTCCCAGAGTCAGGTTACTTGGCAACACAGCCCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS CCA 90 bp | ACACTCTGCAGAAGGGCTGGAGCTCCGCGTCGAAAGGTCGGTGTGTaGTCCCCACAATCAGGATCCTGTCATCCGGTTTCAGGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLCRRAGAPRRKVGV*SPQSGSCHPVSGAS Trigger: TGAAGCTCCTGAAACCGGATGACAGGATCCTGATTGTGGGGACCACACACCGACCTTTCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 90 bp | TGTCTTGGATCCACACCACGGAAGGCTGAAGCTGGCGAGCCACCTTaGAGACCAAGTGTATCATCATCTGCAGGCCGGTTTTGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSTPRKAEAGEPP*RPSVSSSAGRFCPG Trigger: ACCCGGGCAAAACCGGCCTGCAGATGATGATACACTTGGTCTTCAAGGTGGCTCGCCAGCTTCAGCCTTCCGTGGTGTGGATCCAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 90 bp | CCCGTCAAATTCCTGCACTCAATGAACCACTGCCGGATCTGGTCCTaGAGATGCTCCTTGATGTCCGGGCCTTCCAGCATCTTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVKFLHSMNHCRIWS*RCSLMSGPSSIFRS Trigger: GGACCTGAAGATGCTGGAAGGCCCGGACATCAAGGAGCATCTTCAGGACCAGATCCGGCAGTGGTTCATTGAGTGCAGGAATTTGACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 90 bp | ATGAACAGAGCCCTGAGGCGGCCCTGTCTTGCACGCTCCGCTATCTaGATCAGTTTCACAGCCTCTTCCAAAGCTATACTCTTTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MNRALRRPCLARSAI*ISFTASSKAILFAA Trigger: TGCCGCAAAGAGTATAGCTTTGGAAGAGGCTGTGAAACTGATCCAGATAGCGGAGCGTGCAAGACAGGGCCGCCTCAGGGCTCTGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
||
| CDS CCA 90 bp | TTGACCTTCAGAGCCTGGATCAGCAGGCCTTTTTCAACCAGCTCCTaGTACAGCGACTCGATGGTCCTGTCAGCCGTCAGGTCTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFRAWISRPFSTSS*YSDSMVLSAVRSFS Trigger: GGAAAAAGACCTGACGGCTGACAGGACCATCGAGTCGCTGTACCAGGAGCTGGTTGAAAAAGGCCTGCTGATCCAGGCTCTGAAGGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTGTGGGCTTCCCCAGGTGAGCAGGGGTGAGCCTCTCCCTGACAAGCTGTGTTCTGGGGTCTTATaGGAAAAGATGAGAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLCGLPQVSRGEPLPDKLCSGVL*EKMRAE Trigger: TTCAGCTCTCATCTTTTCCAATAAGACCCCAGAACA...CAGCTTGTCAGGGAGAGGCTCACCCCTGCTCACCTGGGGAAGCCCACAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTCCAGCTGCTACTGGCTTCACGGTGTTCATGGTCACTGCGTGGATCCCTTCAAGGCAGACAGGTaGAAAAGGTTAGCCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSCYWLHGVHGHCVDPFKADR*KRLAPV Trigger: AACAGGGGCTAACCTTTTCAACCTGTCTGCCTTGAA...GGGATCCACGCAGTGACCATGAACACCGTGAAGCCAGTAGCAGCTGGACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189011.2 |
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| CDS GCA 90 bp | AAGGAAAATCTGCTTCATGAACAGAGCCCTGAGGCGGCCCTGTCTTaGACGCTCCGCTATCTGGATCAGTTTCACAGCCTCTTCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KENLLHEQSPEAALS*TLRYLDQFHSLFQS Trigger: GCTTTGGAAGAGGCTGTGAAACTGATCCAGATAGCGGAGCGTGCAAGACAGGGCCGCCTCAGGGCTCTGTTCATGAAGCAGATTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGCCTTGGAGTGGCTGCTCTCCGCTTAGCTTCTCTGTGGGCTTCCCCAGGTCCTTTTTGCCTTTTTaGCCCTTATTCTCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVPWSGCSPLSFSVGFPRSFLPF*PLFSLS Trigger: AGACAAGGAGAATAAGGGCAAAAAAGGCAAAAAGGA...CCTGGGGAAGCCCACAGAGAAGCTAAGCGGAGAGCAGCCACTCCAAGGCACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGACCACCTGGCGCAGAGTaGTCCCCAGGTAGCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: VILVLTNTGKCESWVECGPPGAE*SPGSCT Trigger: AGTACAGCTACCTGGGGACAACTCTGCGCCAGGTGG...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
||
| CDS-3UTR CAA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTAGAATTGAGGGCTTCTaGGGTCTGGTGCCACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTGKCESWVECGAQGKPTRIEGF*GLVPHL Trigger: AAGATGTGGCACCAGACCCAAGAAGCCCTCAATTCT...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS TCA 90 bp | TCCACAGAACATATCTGGAAGCATAGTCAGGTCTGGGAACCAAAATaGTCTTTTGGTACACTCTGCAGAAGGGCTGGAGCTCCGCGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: STEHIWKHSQVWEPK*SFGTLCRRAGAPRR Trigger: TCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGTTCCCAGACCTGACTATGCTTCCAGATATGTTCTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS TCA 90 bp | GAAACTTGCCATATCTGGAAGCATAGTCAGGTCTGGGAACCAAAATaGTCTTTTGGTACACTCTGCAGAAGGGCTGGAGCTCCGCGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ETCHIWKHSQVWEPK*SFGTLCRRAGAPRR Trigger: TCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGTTCCCAGACCTGACTATGCTTCCAGATATGGCAAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
||
| CDS GCA 90 bp | CCAGAATGCGACCCATCACTCCATCCAGGACCTTGCGGATCAGCATaGGTTTCTGTGGATGGACTATCTGATCATAGACATTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PECDPSLHPGPCGSA*VSVDGLSDHRHSPC Trigger: ACATGGAGAATGTCTATGATCAGATAGTCCATCCACAGAAACGCATGCTGATCCGCAAGGTCCTGGATGGAGTGATGGGTCGCATTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS-3UTR CAA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTTTTTTCTTCCTCCTCTaGGGTGGCTATGATATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NTGKCESWVECGAQGKPTFFFLL*GGYDIP Trigger: GGGGATATCATAGCCACCCAAGAGGAGGAAGAAAAA...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTTTCAAGGCAGACAGGTaGAAAAGGTTAGCCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NTGKCESWVECGAQGKPTFKADR*KRLAPV Trigger: AACAGGGGCTAACCTTTTCAACCTGTCTGCCTTGAA...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | GATAACAGAACACAGTGGTCAGGGTACAGTGCCTTGGAGTGGCTGCTCTCCGCTTACACAGGGTTCATGTaGGTCATCATGGTGATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DNRTQWSGYSALEWLLSAYTGFM*VIMVIN Trigger: GTTTATCACCATGATGACCAACATGAACCCTGTGTA...AGCGGAGAGCAGCCACTCCAAGGCACTGTACCCTGACCACTGTGTTCTGTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CCA 90 bp | CCACAATCAGGATCCTGTCATCCGGTTTCAGGAGCTTCAGGAGTTTaGGGAGGTATCTTTTTAGGCGTTTCGGTTCAAACCGTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQSGSCHPVSGASGV*GGIFLGVSVQTVSL Trigger: CAGAGAAACGGTTTGAACCGAAACGCCTAAAAAGATACCTCCCCAAACTCCTGAAGCTCCTGAAACCGGATGACAGGATCCTGATTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS-3UTR CAA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTTTCCCCAGAGGGGTTTaGGCATACCAGTTCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTGKCESWVECGAQGKPTFPRGV*AYQFLK Trigger: TTTTAAGAACTGGTATGCCAAAACCCCTCTGGGGAA...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CCA 90 bp | ACCCATCACTCCATCCAGGACCTTGCGGATCAGCATGCGTTTCTGTaGATGGACTATCTGATCATAGACATTCTCCATGTTCCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: THHSIQDLADQHAFL*MDYLIIDILHVPED Trigger: ATCTTCAGGAACATGGAGAATGTCTATGATCAGATAGTCCATCCACAGAAACGCATGCTGATCCGCAAGGTCCTGGATGGAGTGATGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS-3UTR CAA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGATTGTCAAGCAGAGAATaGAGGGCTTCTTGGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VILVLTNTGKCESWVECGLSSRE*RASWVW Trigger: CCAGACCCAAGAAGCCCTCAATTCTCTGCTTGACAA...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAAGGAGCTTCAGGAGTTaGGGGAGGTATCTTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLTNTGKCESWVECGAQRSFRS*GRYLFR Trigger: CCTAAAAAGATACCTCCCCAAACTCCTGAAGCTCCT...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS GCA 90 bp | CTCGATGGTCCCATTATTGAAGCTCAAGTAAGATATGCCCCAGAGTaGCCTGATATGCAAAGAAACAAGAGCCACTCTGGGGTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDGPIIEAQVRYAPE*PDMQRNKSHSGVSK Trigger: TTTGGAAACCCCAGAGTGGCTCTTGTTTCTTTGCATATCAGGGCACTCTGGGGCATATCTTACTTGAGCTTCAATAATGGGACCATCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
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| CDS-3UTR CAA 90 bp | AATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAGGGAAGCCAACTTCCTTTTCCTTTTCTTaGTTGCCAACTGTTAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NTGKCESWVECGAQGKPTSFSFS*LPTVSD Trigger: GTCACTAACAGTTGGCAACAAAGAAAAGGAAAAGGA...AGTTGGCTTCCCTTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | GTTGTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGCATCACTGACTTCATaGAAGAGAGGGGATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVILVLTNTGKCESWVECASLTS*KRGDGF Trigger: GAAACCATCCCCTCTCTTCAATGAAGTCAGTGATGC...ACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAAGATTTGTCACTTGTTaGGACTGGACAATGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LVLTNTGKCESWVECGAQRFVTC*DWTMAS Trigger: TGATGCCATTGTCCAGTCCAAACAAGTGACAAATCT...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | CAAGTAATGGTTATGGCTGTAAGGGACATCTTGCTTGGTGTGCAGCCTCCTGAAATCTTCAGGTCCTCCTaGATATTTACTAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVMVMAVRDILLGVQPPEIFRSS*IFTKAS Trigger: GGAAGCCTTAGTAAATATCAAGGAGGACCTGAAGAT...TTCAGGAGGCTGCACACCAAGCAAGATGTCCCTTACAGCCATAACCATTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | GTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGATTCTGGGTCATAGTCTaGAGGGAAATTCCAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: VILVLTNTGKCESWVECGFWVIV*REIPRL Trigger: GAGTCTTGGAATTTCCCTCAAGACTATGACCCAGAA...TCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS-3UTR CAA 90 bp | TTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTGGAGCACAAAACCAAAATGATCTTTaGGTACACTCTGCAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLTNTGKCESWVECGAQNQNDL*VHSAEG Trigger: CCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGTT...TTGTGCTCCACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS TCA 90 bp | CTTGTGGTTCGGACATCTTCTGAAACTCTTTGTCAAGCAGAGAATTaGGGGCTTCTTGGGTCTGGTGCCACATCTTATTGTACATTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVVRTSSETLCQAEN*GLLGSGATSYCTLG Trigger: ACCTAATGTACAATAAGATGTGGCACCAGACCCAAGAAGCCCTCAATTCTCTGCTTGACAAAGAGTTTCAGAAGATGTCCGAACCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 90 bp | CCTGAACCCTTATCTCCATTTCTAACTCCTTTCGTTTTTCCTCCTTaGTCAGTTCTGGGTCATAGTCTTGAGGGAAATTCCAAGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PEPLSPFLTPFVFPP*SVLGHSLEGNSKTR Trigger: ACGAGTCTTGGAATTTCCCTCAAGACTATGACCCAGAACTGATCAAGGAGGAAAAACGAAAGGAGTTAGAAATGGAGATAAGGGTTCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 90 bp | TTCAGCCATATGTCTTTGTATAAGCTATTTCCTTCCTCCATCAATTaGAGGAAAAGACTTGGTGACATCTTCCACTCCTCATCTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSHMSLYKLFPSSIN*RKRLGDIFHSSSSS Trigger: GGACGAAGATGAGGAGTGGAAGATGTCACCAAGTCTTTTCCTTCAATTGATGGAGGAAGGAAATAGCTTATACAAAGACATATGGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTAATCTTGGTGCTAACTAATACTGGCAAGTGTGAGAGCTGGGTAGAGTGTTTCAGCCATATGTCTTaGTATAAGCTATTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVILVLTNTGKCESWVECFSHMS*YKLFPS Trigger: GGAAGGAAATAGCTTATACAAAGACATATGGCTGAA...ACACTCTACCCAGCTCTCACACTTGCCAGTATTAGTTAGCACCAAGATTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
||
| CDS TCA 90 bp | GTTTCTGTGGATGGACTATCTGATCATAGACATTCTCCATGTTCCTaGAGATCTGCACATAGTTTATGTAGAAGGTGGCTAACATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSVDGLSDHRHSPCS*RSAHSLCRRWLTSE Trigger: TTCAGATGTTAGCCACCTTCTACATAAACTATGTGCAGATCTTCAGGAACATGGAGAATGTCTATGATCAGATAGTCCATCCACAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
||
| CDS GCA 72 bp | CTGCTTCATGAACAGAGCCCTGAGGCGGCCCTGTCTTaGACGCTCCGCTATCTGGATCAGTTTCACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHEQSPEAALS*TLRYLDQFHSL Trigger: GAGGCTGTGAAACTGATCCAGATAGCGGAGCGTGCAAGACAGGGCCGCCTCAGGGCTCTGTTCATGAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
||
| CDS CCA 72 bp | AGAGCCTGGATCAGCAGGCCTTTTTCAACCAGCTCCTaGTACAGCGACTCGATGGTCCTGTCAGCCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAWISRPFSTSS*YSDSMVLSAVR Trigger: CCTGACGGCTGACAGGACCATCGAGTCGCTGTACCAGGAGCTGGTTGAAAAAGGCCTGCTGATCCAGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
||
| CDS CCA 72 bp | AGAAGGGCTGGAGCTCCGCGTCGAAAGGTCGGTGTGTaGTCCCCACAATCAGGATCCTGTCATCCGGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRAGAPRRKVGV*SPQSGSCHPVS Trigger: TGAAACCGGATGACAGGATCCTGATTGTGGGGACCACACACCGACCTTTCGACGCGGAGCTCCAGCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
||
| CDS GCA 72 bp | TGGCGAGCCACCTTGAAGACCAAGTGTATCATCATCTaGAGGCCGGTTTTGCCCGGGTACTTCCCAGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: WRATLKTKCIII*RPVLPGYFPAM Trigger: CATCGCTGGGAAGTACCCGGGCAAAACCGGCCTGCAGATGATGATACACTTGGTCTTCAAGGTGGCTCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 72 bp | GCCCTGAGGCGGCCCTGTCTTGCACGCTCCGCTATCTaGATCAGTTTCACAGCCTCTTCCAAAGCTATACTC | + |
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Preference number: 6 (lower is better) Translates to: ALRRPCLARSAI*ISFTASSKAIL Trigger: GAGTATAGCTTTGGAAGAGGCTGTGAAACTGATCCAGATAGCGGAGCGTGCAAGACAGGGCCGCCTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 72 bp | TCCACACCACGGAAGGCTGAAGCTGGCGAGCCACCTTaGAGACCAAGTGTATCATCATCTGCAGGCCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: STPRKAEAGEPP*RPSVSSSAGRF Trigger: AAACCGGCCTGCAGATGATGATACACTTGGTCTTCAAGGTGGCTCGCCAGCTTCAGCCTTCCGTGGTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 72 bp | ACCAAAATGATCTTTTGGTACACTCTGCAGAAGGGCTaGAGCTCCGCGTCGAAAGGTCGGTGTGTGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TKMIFWYTLQKG*SSASKGRCVVP Trigger: GGGGACCACACACCGACCTTTCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 90 bp | CGAGCCACCTTGAAGACCAAGTGTATCATCATCTGCAGGCCGGTTTaGCCCGGGTACTTCCCAGCGATGTTCAAGGCAGACAGGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RATLKTKCIIICRPV*PGYFPAMFKADRLK Trigger: TTTCAACCTGTCTGCCTTGAACATCGCTGGGAAGTACCCGGGCAAAACCGGCCTGCAGATGATGATACACTTGGTCTTCAAGGTGGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 72 bp | GGCCTTTTTCAACCAGCTCCTGGTACAGCGACTCGATaGTCCTGTCAGCCGTCAGGTCTTTTTCCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GLFQPAPGTATR*SCQPSGLFPSF Trigger: GAAAGAAGGAAAAAGACCTGACGGCTGACAGGACCATCGAGTCGCTGTACCAGGAGCTGGTTGAAAAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CCA 72 bp | AGAGCCTGGATCAGCAGGCCTTTTTCAACCAGCTCCTaGTACAGCGACTCGATGGTCCCATTATTGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RAWISRPFSTSS*YSDSMVPLLKL Trigger: GAGCTTCAATAATGGGACCATCGAGTCGCTGTACCAGGAGCTGGTTGAAAAAGGCCTGCTGATCCAGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
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| CDS CAA 90 bp | GCCATATCTGGAAGCATAGTCAGGTCTGGGAACCAAAATGATCTTTaGGTACACTCTGCAGAAGGGCTGGAGCTCCGCGTCGAAAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: AISGSIVRSGNQNDL*VHSAEGLELRVERS Trigger: CGACCTTTCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGTTCCCAGACCTGACTATGCTTCCAGATATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
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| CDS TCA 72 bp | TGTCCCAACAGCTTCATCTCCTTGGCTCTGCACTCCTaGAGGAAAATCTGCTTCATGAACAGAGCCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CPNSFISLALHS*RKICFMNRALR Trigger: CCTCAGGGCTCTGTTCATGAAGCAGATTTTCCTTCAGGAGTGCAGAGCCAAGGAGATGAAGCTGTTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 90 bp | AACATATCTGGAAGCATAGTCAGGTCTGGGAACCAAAATGATCTTTaGGTACACTCTGCAGAAGGGCTGGAGCTCCGCGTCGAAAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: NISGSIVRSGNQNDL*VHSAEGLELRVERS Trigger: CGACCTTTCGACGCGGAGCTCCAGCCCTTCTGCAGAGTGTACCAAAAGATCATTTTGGTTCCCAGACCTGACTATGCTTCCAGATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CCA 72 bp | TGCACCTCGTCCCGCAGATTTGTCACTTGTTTGGACTaGACAATGGCATCACTGACTTCATTGAAGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CTSSRRFVTCLD*TMASLTSLKRG Trigger: CCCTCTCTTCAATGAAGTCAGTGATGCCATTGTCCAGTCCAAACAAGTGACAAATCTGCGGGACGAGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 72 bp | GGATCCTGTCATCCGGTTTCAGGAGCTTCAGGAGTTTaGGGAGGTATCTTTTTAGGCGTTTCGGTTCAAACC | + |
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Preference number: 6 (lower is better) Translates to: GSCHPVSGASGV*GGIFLGVSVQT Trigger: GGTTTGAACCGAAACGCCTAAAAAGATACCTCCCCAAACTCCTGAAGCTCCTGAAACCGGATGACAGGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS GCA 72 bp | GATCAGTTTCACAGCCTCTTCCAAAGCTATACTCTTTaGGGCATATTTCACAGGGAGGTTCAGTCCGCATTC | + |
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Preference number: 6 (lower is better) Translates to: DQFHSLFQSYTL*GIFHREVQSAF Trigger: GAATGCGGACTGAACCTCCCTGTGAAATATGCCGCAAAGAGTATAGCTTTGGAAGAGGCTGTGAAACTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS GCA 72 bp | CCCATTATTGAAGCTCAAGTAAGATATGCCCCAGAGTaGCCTGATATGCAAAGAAACAAGAGCCACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PIIEAQVRYAPE*PDMQRNKSHSG Trigger: CCCAGAGTGGCTCTTGTTTCTTTGCATATCAGGGCACTCTGGGGCATATCTTACTTGAGCTTCAATAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
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| CDS CCA 72 bp | TCCATCCAGGACCTTGCGGATCAGCATGCGTTTCTGTaGATGGACTATCTGATCATAGACATTCTCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: SIQDLADQHAFL*MDYLIIDILHV Trigger: AACATGGAGAATGTCTATGATCAGATAGTCCATCCACAGAAACGCATGCTGATCCGCAAGGTCCTGGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CCA 72 bp | CTCGCCAAACTTTCTGGATCTGGAGTGCCGCCAACTTaGTGTCTAATAATCTATGTCCCAACAGCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LAKLSGSGVPPT*CLIIYVPTASS Trigger: AGATGAAGCTGTTGGGACATAGATTATTAGACACCAAGTTGGCGGCACTCCAGATCCAGAAAGTTTGGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 72 bp | GGATCAGTTTCACAGCCTCTTCCAAAGCTATACTCTTaGCGGCATATTTCACAGGGAGGTTCAGTCCGCATT | + |
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Preference number: 6 (lower is better) Translates to: GSVSQPLPKLYS*RHISQGGSVRI Trigger: AATGCGGACTGAACCTCCCTGTGAAATATGCCGCAAAGAGTATAGCTTTGGAAGAGGCTGTGAAACTGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 72 bp | TTTAGCTGCACCTCGTCCCGCAGATTTGTCACTTGTTaGGACTGGACAATGGCATCACTGACTTCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FSCTSSRRFVTC*DWTMASLTSLK Trigger: CTTCAATGAAGTCAGTGATGCCATTGTCCAGTCCAAACAAGTGACAAATCTGCGGGACGAGGTGCAGCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 72 bp | AAACTCTCTTCCTCCTCTCGGTACACAGGGTTCATGTaGGTCATCATGGTGATAAACTCGATGGCAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: KLSSSSRYTGFM*VIMVINSMAVS Trigger: ACTCACTGCCATCGAGTTTATCACCATGATGACCAACATGAACCCTGTGTACCGAGAGGAGGAAGAGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 72 bp | CGGACATCTTCTGAAACTCTTTGTCAAGCAGAGAATTaGGGGCTTCTTGGGTCTGGTGCCACATCTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: RTSSETLCQAEN*GLLGSGATSYC Trigger: ACAATAAGATGTGGCACCAGACCCAAGAAGCCCTCAATTCTCTGCTTGACAAAGAGTTTCAGAAGATGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS TCA 72 bp | TTCAGGAAATACCTGGGTATGGGGACATCCAACTGTTaGGGAGACAGCTTCAGGTCCTGTAAGATATCATCA | + |
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Preference number: 6 (lower is better) Translates to: FRKYLGMGTSNC*GDSFRSCKISS Trigger: TGATGATATCTTACAGGACCTGAAGCTGTCTCCTCAACAGTTGGATGTCCCCATACCCAGGTATTTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 90 bp | GTGAAGCCATCAGTGACTTTAGATAGGCAGCTGATGTTCAAGGAATaGGTGAGCTTACCTCCATTGCGTAGAATGATTTCTTTCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: VKPSVTLDRQLMFKE*VSLPPLRRMISFHR Trigger: TCTGTGGAAAGAAATCATTCTACGCAATGGAGGTAAGCTCACCAATTCCTTGAACATCAGCTGCCTATCTAAAGTCACTGATGGCTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 72 bp | AGCTATTTCCTTCCTCCATCAATTGAAGGAAAAGACTaGGTGACATCTTCCACTCCTCATCTTCGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SYFLPPSIEGKD*VTSSTPHLRPS Trigger: AGAAGGACGAAGATGAGGAGTGGAAGATGTCACCAAGTCTTTTCCTTCAATTGATGGAGGAAGGAAATAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CAA 72 bp | TCGTTTTTCCTCCTTGATCAGTTCTGGGTCATAGTCTaGAGGGAAATTCCAAGACTCGTCTTTATTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SFFLLDQFWVIV*REIPRLVFIQP Trigger: TGGCTGAATAAAGACGAGTCTTGGAATTTCCCTCAAGACTATGACCCAGAACTGATCAAGGAGGAAAAACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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| CDS CAA 72 bp | AGCTATTTCCTTCCTCCATCAATTGAAGGAAAAGACTaGGTGACATCTTCCACTCCTCATCTTCGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SYFLPPSIEGKD*VTSSTPHLRPS Trigger: TGAAGGACGAAGATGAGGAGTGGAAGATGTCACCAAGTCTTTTCCTTCAATTGATGGAGGAAGGAAATAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212394.2 |
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| CDS CAA 72 bp | CAGCTGATGTTCAAGGAATTGGTGAGCTTACCTCCATaGCGTAGAATGATTTCTTTCCACAGAACATATCTG | + |
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Preference number: 6 (lower is better) Translates to: QLMFKELVSLPP*RRMISFHRTYL Trigger: CAGATATGTTCTGTGGAAAGAAATCATTCTACGCAATGGAGGTAAGCTCACCAATTCCTTGAACATCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113094.9 |
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| CDS CAA 72 bp | TCAGTGACTTTAGATAGGCAGCTGATGTTCAAGGAATaGGTGAGCTTACCTCCATTGCGTAGAATGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SVTLDRQLMFKE*VSLPPLRRMIS Trigger: AGAAATCATTCTACGCAATGGAGGTAAGCTCACCAATTCCTTGAACATCAGCTGCCTATCTAAAGTCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113094.9 ENSMUST00000212394.2 |
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