Pregenerated sensors for IQANK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000102018Ensembl transcript IDs: ENSMUST00000187868.3, ENSMUST00000187976.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCAGGTCCCCTTCGAAGGCGGCCTCTAGCAGGCGACGGCGGCGCTaGAGCTCCTCCCTCCGGGCGCGCTCCTCTGCCTCCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PRSPSKAASSRRRRR*SSSLRARSSASSFS Trigger: GGAGAAGGAGGAGGCAGAGGAGCGCGCCCGGAGGGAGGAGCTGCAGCGCCGCCGTCGCCTGCTAGAGGCCGCCTTCGAAGGGGACCTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 90 bp | AAGGCGCCCTTGGTGTTGGGGTTGGCACCCAGCTCTGCCAGCAGCTaGATGGCCATGGTCTGCCCGCCCGCCGCCGCCTCGGAGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: KAPLVLGLAPSSASS*MAMVCPPAAASERG Trigger: GCCTCTCTCCGAGGCGGCGGCGGGCGGGCAGACCATGGCCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCAAGGGCGCCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 90 bp | CCTCGGAGAGAGGCGTGTTCCCGTGGCTGTCCTCGCACTCCACGGTaGCCACGCGCCTCTGCAGTCGCCGAGCCTTGCCGTCCTCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: PRREACSRGCPRTPR*PRASAVAEPCRPRR Trigger: ACGACGAGGACGGCAAGGCTCGGCGACTGCAGAGGCGCGTGGCCACCGTGGAGTGCGAGGACAGCCACGGGAACACGCCTCTCTCCGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 90 bp | TGGTGTTGGGGTTGGCACCCAGCTCTGCCAGCAGCTGGATGGCCATaGTCTGCCCGCCCGCCGCCGCCTCGGAGAGAGGCGTGTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: WCWGWHPALPAAGWP*SARPPPPRREACSR Trigger: ACGGGAACACGCCTCTCTCCGAGGCGGCGGCGGGCGGGCAGACCATGGCCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS GCA 90 bp | CCTCGCACTCCACGGTGGCCACGCGCCTCTGCAGTCGCCGAGCCTTaGCGTCCTCGTCGTAGCCCACGCCTTCTCTGGTCATCAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PRTPRWPRASAVAEP*RPRRSPRLLWSSAA Trigger: AGCAGCTGATGACCAGAGAAGGCGTGGGCTACGACGAGGACGGCAAGGCTCGGCGACTGCAGAGGCGCGTGGCCACCGTGGAGTGCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 90 bp | AAGCTGCCCGGTAGAGTGGCGTGCGGCCGAAGGCGCCCTTGGTGTTaGGGTTGGCACCCAGCTCTGCCAGCAGCTGGATGGCCATGGTCT | + |
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Preference number: 5 (lower is better) Translates to: KLPGRVACGRRRPWC*GWHPALPAAGWPWS Trigger: AGACCATGGCCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCAAGGGCGCCTTCGGCCGCACGCCACTCTACCGGGCAGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS TCA 90 bp | GAGCCAGCTCCCTTCGCGCCAGATATTGCCGGAAGGCACACTGGATaGCGATGGCAGCTTTGTCCTCTGCGGTTGGCGCTGCAGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: EPAPFAPDIAGRHTG*RWQLCPLRLALQGP Trigger: AGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATATCTGGCGCGAAGGGAGCTGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | CCGGAAGGCACACTGGATGACGATGGCAGCTTTGTCCTCTGCGGTTaGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PEGTLDDDGSFVLCG*RCRGLGVLREGPFA Trigger: AGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | CGGTTGGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTaGTTGGATGACTTGCCTTCCTTTGCAGCTGGCGACTCTCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: RLALQGPGGSQRRTL*LDDLPSFAAGDSLS Trigger: CGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | GGCACACTGGATGACGATGGCAGCTTTGTCCTCTGCGGTTGGCGCTaGAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTGGATG | + |
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Preference number: 5 (lower is better) Translates to: GTLDDDGSFVLCGWR*RGLGVLREGPFAWM Trigger: CATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | ATATTGCCGGAAGGCACACTGGATGACGATGGCAGCTTTGTCCTCTaGGGTTGGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: ILPEGTLDDDGSFVL*GWRCRGLGVLREGP Trigger: GGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | CCATCGGCTCGGATGCGATCCCCTACGTCCTTCATCAGCACGTCATaGAGCTCCGTGACCCGGCACTTGAGCCCAGGTTCTGTATCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PSARMRSPTSFISTS*SSVTRHLSPGSVSS Trigger: CGAGGATACAGAACCTGGGCTCAAGTGCCGGGTCACGGAGCTCCATGACGTGCTGATGAAGGACGTAGGGGATCGCATCCGAGCCGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 90 bp | GCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTGGATaGCTTGCCTTCCTTTGCAGCTGGCGACTCTCTCTCGGCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: AAGAWGFSEKDPLLG*LAFLCSWRLSLGFP Trigger: TGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | TGGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTaGATGACTTGCCTTCCTTTGCAGCTGGCGACTCTCTCTCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: WRCRGLGVLREGPFA*MTCLPLQLATLSRL Trigger: AAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | GGGCATCTGCACACGCACTGGGAGCAGGGTCTGCAGCTGGTCAGCTaGGGGCCACTTAACTTGGGTGACAAAGAAGAGGCGGAAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GHLHTHWEQGLQLVS*GPLNLGDKEEAEVL Trigger: GAGAACTTCCGCCTCTTCTTTGTCACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCTGCTCCCAGTGCGTGTGCAGATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 90 bp | TGTCCTGGTATCTCAAGAAAGTGGCTGCCTGGCCAGAAGGGTCGATaGCAAGAGGCCACCGTCCATCGGCTCGGATGCGATCCCCTACGT | + |
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Preference number: 5 (lower is better) Translates to: CPGISRKWLPGQKGR*QEATVHRLGCDPLR Trigger: ACGTAGGGGATCGCATCCGAGCCGATGGACGGTGGCCTCTTGTCATCGACCCTTCTGGCCAGGCAGCCACTTTCTTGAGATACCAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | AGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTGGATGACTTaGCTTCCTTTGCAGCTGGCGACTCTCTCTCGGCTTCCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RGLGVLREGPFAWMT*LPLQLATLSRLPSS Trigger: ACTGCTGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | TCCAGCCTGGCCATGGCCAGTGTCTCCTCAGCCTTCTGTGCCTCTTaGTGCAATCTGTCCACTTGGGCCTCTGCATCCTTGATGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSLAMASVSSAFCAS*CNLSTWASASLMAC Trigger: ACAGGCCATCAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAGAGGCACAGAAGGCTGAGGAGACACTGGCCATGGCCAGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | ACTGGGAGCAGGGTCTGCAGCTGGTCAGCTGGGGGCCACTTAACTTaGGTGACAAAGAAGAGGCGGAAGTTCTCTAGGCGAGCCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TGSRVCSWSAGGHLT*VTKKRRKFSRRASW Trigger: CCAAGAGGCTCGCCTAGAGAACTTCCGCCTCTTCTTTGTCACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCTGCTCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 90 bp | ATGTTGATGCGCTTGGCCTCGTTCTCCTTGTGCTTCTGGGCCTCCTaGGCACGGCGCTGCTGCTCTGCCTCCATGTTCTTGAGCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: MLMRLASFSLCFWAS*ARRCCSASMFLSIA Trigger: AGCTATGCTCAAGAACATGGAGGCAGAGCAGCAGCGCCGTGCTCAGGAGGCCCAGAAGCACAAGGAGAACGAGGCCAAGCGCATCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 90 bp | ACAGGTTCACTTGACGCAGGTCAAACACCAGTGGCTTCCCGTACCTaGGTGCCCCCAGGAGAGCCAGCCGAATCCTCTCAGGTCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: TGSLDAGQTPVASRT*VPPGEPAESSQVSS Trigger: ACTTGAGACCTGAGAGGATTCGGCTGGCTCTCCTGGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 90 bp | TGCACGACCTCCAGCTGTTGCTGTACTACTGGGAACAGGTTCACTTaGCGCAGGTCAAACACCAGTGGCTTCCCGTACCTGAGTGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: CTTSSCCCTTGNRFT*RRSNTSGFPYLSAP Trigger: GGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTACAGCAACAGCTGGAGGTCGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | TTTGCCAGCAGCCCACGATTCAACAGGGCCTGTGCCAGGCCAGTCTaGACGACCTCCAGCTGTTGCTGTACTACTGGGAACAGGTTCACT | + |
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Preference number: 5 (lower is better) Translates to: FASSPRFNRACARPV*TTSSCCCTTGNRFT Trigger: AGTGAACCTGTTCCCAGTAGTACAGCAACAGCTGGAGGTCGTGCAGACTGGCCTGGCACAGGCCCTGTTGAATCGTGGGCTGCTGGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 90 bp | TGCTTGGAAACAGCTTACAAACTTGAGGGTTGGTCTGCTCCGGGGTaGTCCCGTCATCCGCGTACATCCGGGGGTCTGCTCCGATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: CLETAYKLEGWSAPG*SRHPRTSGGLLRSS Trigger: TGAAGATCGGAGCAGACCCCCGGATGTACGCGGATGACGGGAGCACCCCGGAGCAGACCAACCCTCAAGTTTGTAAGCTGTTTCCAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187976.8 |
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| CDS CCA 90 bp | CTGTACTACTGGGAACAGGTTCACTTGACGCAGGTCAAACACCAGTaGCTTCCCGTACCTGAGTGCCCCCAGGAGAGCCAGCCGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: LYYWEQVHLTQVKHQ*LPVPECPQESQPNP Trigger: AGGATTCGGCTGGCTCTCCTGGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | CTGTGCCAGGCCAGTCTGCACGACCTCCAGCTGTTGCTGTACTACTaGGAACAGGTTCACTTGACGCAGGTCAAACACCAGTGGCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LCQASLHDLQLLLYY*EQVHLTQVKHQWLP Trigger: GGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTACAGCAACAGCTGGAGGTCGTGCAGACTGGCCTGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | GTGACAAAGAAGAGGCGGAAGTTCTCTAGGCGAGCCTCTTGGAACTaGGAGGGGTCATACTCAGGTCCATCTGTTGGCCGAAGCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: VTKKRRKFSRRASWN*EGSYSGPSVGRSSD Trigger: GTCACTGCTTCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCGCCTAGAGAACTTCCGCCTCTTCTTTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | ACTTGGGTGACAAAGAAGAGGCGGAAGTTCTCTAGGCGAGCCTCTTaGAACTGGGAGGGGTCATACTCAGGTCCATCTGTTGGCCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TWVTKKRRKFSRRAS*NWEGSYSGPSVGRS Trigger: GCTTCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCGCCTAGAGAACTTCCGCCTCTTCTTTGTCACCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | AGTGTCTCCTCAGCCTTCTGTGCCTCTTGCTGCAATCTGTCCACTTaGGCCTCTGCATCCTTGATGGCCTGTAGTGTGAGTTCGGTATTG | + |
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Preference number: 5 (lower is better) Translates to: SVSSAFCASCCNLST*ASASLMACSVSSVL Trigger: CAATACCGAACTCACACTACAGGCCATCAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAGAGGCACAGAAGGCTGAGGAGACACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 90 bp | TCCTCTCAGGTCTCAAGTGCTCCGGATTTAGGGTGTCCACATAGTTaGTGTCCTGGTATCTCAAGAAAGTGGCTGCCTGGCCAGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSQVSSAPDLGCPHS*CPGISRKWLPGQKG Trigger: ACCCTTCTGGCCAGGCAGCCACTTTCTTGAGATACCAGGACACCAACTATGTGGACACCCTAAATCCGGAGCACTTGAGACCTGAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | CCTTCGAAGGCGGCCTCTAGCAGGCGACGGCGGCGCTaGAGCTCCTCCCTCCGGGCGCGCTCCTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSKAASSRRRRR*SSSLRARSSAS Trigger: GGAGGCAGAGGAGCGCGCCCGGAGGGAGGAGCTGCAGCGCCGCCGTCGCCTGCTAGAGGCCGCCTTCGAAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS GCA 72 bp | TGGCCACCGCGGCCAGGGAGGCCACCTGCTCCGGGGTaGTCCCGTCATCCGCGTACATCCGGGGGTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: WPPRPGRPPAPG*SRHPRTSGGLL Trigger: GAGCAGACCCCCGGATGTACGCGGATGACGGGAGCACCCCGGAGCAGGTGGCCTCCCTGGCCGCGGTGGCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | GAGGCGTGTTCCCGTGGCTGTCCTCGCACTCCACGGTaGCCACGCGCCTCTGCAGTCGCCGAGCCTTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: EACSRGCPRTPR*PRASAVAEPCR Trigger: ACGGCAAGGCTCGGCGACTGCAGAGGCGCGTGGCCACCGTGGAGTGCGAGGACAGCCACGGGAACACGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 72 bp | TTGGTGTTGGGGTTGGCACCCAGCTCTGCCAGCAGCTaGATGGCCATGGTCTGCCCGCCCGCCGCCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LVLGLAPSSASS*MAMVCPPAAAS Trigger: CGAGGCGGCGGCGGGCGGGCAGACCATGGCCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 72 bp | GGTAGAGTGGCGTGCGGCCGAAGGCGCCCTTGGTGTTaGGGTTGGCACCCAGCTCTGCCAGCAGCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: GRVACGRRRPWC*GWHPALPAAGW Trigger: CCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCAAGGGCGCCTTCGGCCGCACGCCACTCTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CAA 72 bp | AGTGGCGTGCGGCCGAAGGCGCCCTTGGTGTTGGGGTaGGCACCCAGCTCTGCCAGCAGCTGGATGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: SGVRPKAPLVLG*APSSASSWMAM Trigger: CATGGCCATCCAGCTGCTGGCAGAGCTGGGTGCCAACCCCAACACCAAGGGCGCCTTCGGCCGCACGCCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS CCA 72 bp | TCTCTGGTCATCAGCTGCTCCACCTCCTTGAGCACCTaGCGGATCTCCCCCAGGTCCCCTTCGAAGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLVISCSTSLST*RISPRSPSKAA Trigger: GGCCGCCTTCGAAGGGGACCTGGGGGAGATCCGCCAGGTGCTCAAGGAGGTGGAGCAGCTGATGACCAGAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000187868.3 ENSMUST00000187976.8 |
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| CDS TCA 72 bp | GTTCTTGAGCATAGCTTCTGTGAGGCTCAGGTCCCATaGCTGCAGCACGCTGGCCACCGCGGCCAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: VLEHSFCEAQVP*LQHAGHRGQGG Trigger: GCCTCCCTGGCCGCGGTGGCCAGCGTGCTGCAGTCATGGGACCTGAGCCTCACAGAAGCTATGCTCAAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | CCACTGGGCATCTGCACACGCACTGGGAGCAGGGTCTaGAGCTGGTCAGCTGGGGGCCACTTAACTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLGICTRTGSRV*SWSAGGHLTWV Trigger: CACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCTGCTCCCAGTGCGTGTGCAGATGCCCAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | TATTGCCGGAAGGCACACTGGATGACGATGGCAGCTTaGTCCTCTGCGGTTGGCGCTGCAGGGGCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: YCRKAHWMTMAA*SSAVGAAGAWG Trigger: CCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CGCGCCAGATATTGCCGGAAGGCACACTGGATGACGATGGCAGCTTaGTCCTCTGCGGTTGGCGCTGCAGGGGCCTGGGGGTTCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RARYCRKAHWMTMAA*SSAVGAAGAWGFSE Trigger: CTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATATCTGGCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 72 bp | CGCTTGGCCTCGTTCTCCTTGTGCTTCTGGGCCTCCTaGGCACGGCGCTGCTGCTCTGCCTCCATGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RLASFSLCFWAS*ARRCCSASMFL Trigger: CAAGAACATGGAGGCAGAGCAGCAGCGCCGTGCTCAGGAGGCCCAGAAGCACAAGGAGAACGAGGCCAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CCTACGTCCTTCATCAGCACGTCATGGAGCTCCGTGACCCGGCACTaGAGCCCAGGTTCTGTATCCTCGTCCTCCGGAGTCTGTTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PTSFISTSWSSVTRH*SPGSVSSSSGVCSR Trigger: GCGGGAACAGACTCCGGAGGACGAGGATACAGAACCTGGGCTCAAGTGCCGGGTCACGGAGCTCCATGACGTGCTGATGAAGGACGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 72 bp | CTTGACGCAGGTCAAACACCAGTGGCTTCCCGTACCTaGGTGCCCCCAGGAGAGCCAGCCGAATCCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LDAGQTPVASRT*VPPGEPAESSQ Trigger: CTGAGAGGATTCGGCTGGCTCTCCTGGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | GATGACGATGGCAGCTTTGTCCTCTGCGGTTGGCGCTaGAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTT | + |
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Preference number: 6 (lower is better) Translates to: DDDGSFVLCGWR*RGLGVLREGPF Trigger: AAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | ACAGCTTACAAACTTGAGGGTTGGTCTGCTCCGGGGTaGTCCCGTCATCCGCGTACATCCGGGGGTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TAYKLEGWSAPG*SRHPRTSGGLL Trigger: GAGCAGACCCCCGGATGTACGCGGATGACGGGAGCACCCCGGAGCAGACCAACCCTCAAGTTTGTAAGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187976.8 |
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| CDS CCA 72 bp | ACACTGGATGACGATGGCAGCTTTGTCCTCTGCGGTTaGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: TLDDDGSFVLCG*RCRGLGVLREG Trigger: TCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | CGGATGCGATCCCCTACGTCCTTCATCAGCACGTCATaGAGCTCCGTGACCCGGCACTTGAGCCCAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RMRSPTSFISTS*SSVTRHLSPGS Trigger: AGAACCTGGGCTCAAGTGCCGGGTCACGGAGCTCCATGACGTGCTGATGAAGGACGTAGGGGATCGCATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | GGCATCTGCACACGCACTGGGAGCAGGGTCTGCAGCTaGTCAGCTGGGGGCCACTTAACTTGGGTGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GICTRTGSRVCS*SAGGHLTWVTK Trigger: CTTTGTCACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCTGCTCCCAGTGCGTGTGCAGATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTGGATGACTaGCCTTCCTTTGCAGCTGGCGACTCTCTCTCGGCTTCCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGPGGSQRRTLCLDD*PSFAAGDSLSASQQ Trigger: CTGCTGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | TTGGCGCTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTaGGATGACTTGCCTTCCTTTGCAGCTGGCGACTCTCTCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LALQGPGGSQRRTLC*DDLPSFAAGDSLSA Trigger: AGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CTGACGCTCCTGACAACGACGAGCCAGCTCCCTTCGCGCCAGATATaGCCGGAAGGCACACTGGATGACGATGGCAGCTTTGTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LTLLTTTSQLPSRQI*PEGTLDDDGSFVLC Trigger: GCAGAGGACAAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATATCTGGCGCGAAGGGAGCTGGCTCGTCGTTGTCAGGAGCGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CTCCAGCCTGGCCATGGCCAGTGTCTCCTCAGCCTTCTGTGCCTCTaGCTGCAATCTGTCCACTTGGGCCTCTGCATCCTTGATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LQPGHGQCLLSLLCL*LQSVHLGLCILDGL Trigger: CAGGCCATCAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAGAGGCACAGAAGGCTGAGGAGACACTGGCCATGGCCAGGCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | CTGCAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTaGTTGGATGACTTGCCTTCCTTTGCAGCTGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: LQGPGGSQRRTL*LDDLPSFAAGD Trigger: GTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | AGCCCACGATTCAACAGGGCCTGTGCCAGGCCAGTCTaGACGACCTCCAGCTGTTGCTGTACTACTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SPRFNRACARPV*TTSSCCCTTGN Trigger: GTTCCCAGTAGTACAGCAACAGCTGGAGGTCGTGCAGACTGGCCTGGCACAGGCCCTGTTGAATCGTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | TGGGAACAGGTTCACTTGACGCAGGTCAAACACCAGTaGCTTCCCGTACCTGAGTGCCCCCAGGAGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: WEQVHLTQVKHQ*LPVPECPQESQ Trigger: CTGGCTCTCCTGGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | TTCATCAGCACGTCATGGAGCTCCGTGACCCGGCACTaGAGCCCAGGTTCTGTATCCTCGTCCTCCGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: FISTSWSSVTRH*SPGSVSSSSGV Trigger: GACTCCGGAGGACGAGGATACAGAACCTGGGCTCAAGTGCCGGGTCACGGAGCTCCATGACGTGCTGATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | GGCGAGCCTCTTGGAACTGGGAGGGGTCATACTCAGGTCCATCTGTaGGCCGAAGCAGTGACAGATACCCTTCCTTTGCCAGCAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GEPLGTGRGHTQVHL*AEAVTDTLPLPAAH Trigger: GTGGGCTGCTGGCAAAGGAAGGGTATCTGTCACTGCTTCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | CTGCACGACCTCCAGCTGTTGCTGTACTACTGGGAACAGGTTCACTaGACGCAGGTCAAACACCAGTGGCTTCCCGTACCTGAGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LHDLQLLLYYWEQVH*TQVKHQWLPVPECP Trigger: GGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTACAGCAACAGCTGGAGGTCGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 72 bp | ATCTCAAGAAAGTGGCTGCCTGGCCAGAAGGGTCGATaGCAAGAGGCCACCGTCCATCGGCTCGGATGCGAT | + |
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Preference number: 6 (lower is better) Translates to: ISRKWLPGQKGR*QEATVHRLGCD Trigger: ATCGCATCCGAGCCGATGGACGGTGGCCTCTTGTCATCGACCCTTCTGGCCAGGCAGCCACTTTCTTGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | GCCATGGCCAGTGTCTCCTCAGCCTTCTGTGCCTCTTaGTGCAATCTGTCCACTTGGGCCTCTGCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AMASVSSAFCAS*CNLSTWASASL Trigger: CAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAGAGGCACAGAAGGCTGAGGAGACACTGGCCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | AGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTaGATGACTTGCCTTCCTTTGCAGCTGGCGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: RGLGVLREGPFA*MTCLPLQLATL Trigger: GAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | CAGGGGCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTaGGATGACTTGCCTTCCTTTGCAGCTGGCGACTCT | + |
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Preference number: 6 (lower is better) Translates to: QGPGGSQRRTLC*DDLPSFAAGDS Trigger: AGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | CTGACAACGACGAGCCAGCTCCCTTCGCGCCAGATATaGCCGGAAGGCACACTGGATGACGATGGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTTTSQLPSRQI*PEGTLDDDGSF Trigger: AAAGCTGCCATCGTCATCCAGTGTGCCTTCCGGCAATATCTGGCGCGAAGGGAGCTGGCTCGTCGTTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | GGGGTTCTCAGAGAAGGACCCTTTGCTTGGATGACTTGCCTTCCTTaGCAGCTGGCGACTCTCTCTCGGCTTCCCAGCAGTAGCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: GVLREGPFAWMTCLP*QLATLSRLPSSSSK Trigger: CTTCGAGCTACTGCTGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS TCA 72 bp | GCCTGGGGGTTCTCAGAGAAGGACCCTTTGCTTGGATaGCTTGCCTTCCTTTGCAGCTGGCGACTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AWGFSEKDPLLG*LAFLCSWRLSL Trigger: GAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCTGAGAACCCCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | AAGAGGCGGAAGTTCTCTAGGCGAGCCTCTTGGAACTaGGAGGGGTCATACTCAGGTCCATCTGTTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: KRRKFSRRASWN*EGSYSGPSVGR Trigger: TCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCGCCTAGAGAACTTCCGCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | AGGGTCTGCAGCTGGTCAGCTGGGGGCCACTTAACTTaGGTGACAAAGAAGAGGCGGAAGTTCTCTAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RVCSWSAGGHLT*VTKKRRKFSRR Trigger: TCGCCTAGAGAACTTCCGCCTCTTCTTTGTCACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | CATCTGTTGGCCGAAGCAGTGACAGATACCCTTCCTTaGCCAGCAGCCCACGATTCAACAGGGCCTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: HLLAEAVTDTLP*PAAHDSTGPVP Trigger: TGGCACAGGCCCTGTTGAATCGTGGGCTGCTGGCAAAGGAAGGGTATCTGTCACTGCTTCGGCCAACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | ATGGCCAGTGTCTCCTCAGCCTTCTGTGCCTCTTGCTaGAATCTGTCCACTTGGGCCTCTGCATCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: MASVSSAFCASC*NLSTWASASLM Trigger: CATCAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAGAGGCACAGAAGGCTGAGGAGACACTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS GCA 72 bp | CACATAGTTGGTGTCCTGGTATCTCAAGAAAGTGGCTaGCTGGCCAGAAGGGTCGATGACAAGAGGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: HIVGVLVSQESG*LARRVDDKRPP Trigger: CGGTGGCCTCTTGTCATCGACCCTTCTGGCCAGGCAGCCACTTTCTTGAGATACCAGGACACCAACTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | TTCTGGTGCTTGGAAACAGCTTACAAACTTGAGGGTTaGTCTGCTCCGGGGTGCTCCCGTCATCCGCGTACA | + |
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Preference number: 6 (lower is better) Translates to: FWCLETAYKLEG*SAPGCSRHPRT Trigger: TGTACGCGGATGACGGGAGCACCCCGGAGCAGACCAACCCTCAAGTTTGTAAGCTGTTTCCAAGCACCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187976.8 |
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| CDS CAA 72 bp | AGAGAAGGACCCTTTGCTTGGATGACTTGCCTTCCTTaGCAGCTGGCGACTCTCTCTCGGCTTCCCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: REGPFAWMTCLP*QLATLSRLPSS Trigger: ACTGCTGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGGGTCCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | TTCTGCTGCTCCTTAGCCAGCTGCTGCACCTTGATGTaGATGCGCTTGGCCTCGTTCTCCTTGTGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FCCSLASCCTLM*MRLASFSLCFW Trigger: CCAGAAGCACAAGGAGAACGAGGCCAAGCGCATCAACATCAAGGTGCAGCAGCTGGCTAAGGAGCAGCAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | CTCCAGCTGTTGCTGTACTACTGGGAACAGGTTCACTaGACGCAGGTCAAACACCAGTGGCTTCCCGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LQLLLYYWEQVH*TQVKHQWLPVP Trigger: AGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTACAGCAACAGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | CTTGGAACTGGGAGGGGTCATACTCAGGTCCATCTGTaGGCCGAAGCAGTGACAGATACCCTTCCTTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGTGRGHTQVHL*AEAVTDTLPLP Trigger: TGGCAAAGGAAGGGTATCTGTCACTGCTTCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | GTCTCAAGTGCTCCGGATTTAGGGTGTCCACATAGTTaGTGTCCTGGTATCTCAAGAAAGTGGCTGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSSAPDLGCPHS*CPGISRKWLPG Trigger: GCCAGGCAGCCACTTTCTTGAGATACCAGGACACCAACTATGTGGACACCCTAAATCCGGAGCACTTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CCA 72 bp | ACAAAGAAGAGGCGGAAGTTCTCTAGGCGAGCCTCTTaGAACTGGGAGGGGTCATACTCAGGTCCATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TKKRRKFSRRAS*NWEGSYSGPSV Trigger: AACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCGCCTAGAGAACTTCCGCCTCTTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 90 bp | ACTTGGGCCTCTGCATCCTTGATGGCCTGTAGTGTGAGTTCGGTATaGCCCATGAACTTCCTCTCACACTTGTCATGTTCCATGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: TWASASLMACSVSSV*PMNFLSHLSCSMIL Trigger: GAGGATCATGGAACATGACAAGTGTGAGAGGAAGTTCATGGGCAATACCGAACTCACACTACAGGCCATCAAGGATGCAGAGGCCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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| CDS CAA 72 bp | GTGAGTTCGGTATTGCCCATGAACTTCCTCTCACACTaGTCATGTTCCATGATCCTCCGATTGAGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: VSSVLPMNFLSH*SCSMILRLSSQ Trigger: CTGTGAGCTCAATCGGAGGATCATGGAACATGACAAGTGTGAGAGGAAGTTCATGGGCAATACCGAACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187868.3 |
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