Pregenerated sensors for IPO8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040029Ensembl transcript IDs: ENSMUST00000048418.14, ENSMUST00000145960.2, ENSMUST00000204936.2, ENSMUST00000239062.2
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAATTCCAACCCCTTAGAAGCTGAGCACGGGCTGCCACAAGTCTaGGGTCAGCCTAGGCCACAGAGTGAGTTCCAGTCCAGCCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: CNSNPLEAEHGLPQV*GQPRPQSEFQSSQN Trigger: GTTCTGGCTGGACTGGAACTCACTCTGTGGCCTAGGCTGACCTCAGACTTGTGGCAGCCCGTGCTCAGCTTCTAAGGGGTTGGAATTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR TCA 90 bp | TTACACTTCCACCACACCAGCTCTGGCCGGTCATCCTCATCAATCTaGAGAGTCTCCGGAGGGACCGTCCTATCAATGATGGTCCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LHFHHTSSGRSSSSI*RVSGGTVLSMMVRK Trigger: CTTTCGGACCATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTGATGAGGATGACCGGCCAGAGCTGGTGTGGTGGAAGTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR GCA 90 bp | GCCAGGAGGCTGAGTCAGGACTGCAATCTTGAGGCCAACCTGGGTTaGATACAGAGACAGACTCTATCTCACAAAGAAAGAAGGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: ARRLSQDCNLEANLG*IQRQTLSHKERREG Trigger: GCCCTCCCTTCTTTCTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCAGTCCTGACTCAGCCTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR GCA 90 bp | CAGCATCTGGGTGTGTTAACAGTGGCCAGGAGGCTGAGTCAGGACTaGAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: QHLGVLTVARRLSQD*NLEANLGCIQRQTL Trigger: TAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCAGTCCTGACTCAGCCTCCTGGCCACTGTTAACACACCCAGATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR TCA 90 bp | GGGTGTGTTAACAGTGGCCAGGAGGCTGAGTCAGGACTGCAATCTTaGGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: GCVNSGQEAESGLQS*GQPGLHTETDSISQ Trigger: TTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCAGTCCTGACTCAGCCTCCTGGCCACTGTTAACACACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR TCA 90 bp | CCACAATGTTGTCACGGATCTGCTGCCGGTCGTTCTCATGAATATTaGATGGAAATATCACTTCTCCTGGTGGAGGCTCCCTGTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: PQCCHGSAAGRSHEY*MEISLLLVEAPCLA Trigger: GGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAGCAGATCCGTGACAACATTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR TCA 90 bp | CATCCTCATCAATCTGAAGAGTCTCCGGAGGGACCGTCCTATCAATaGTGGTCCGAAAGATCTCCATCCACGTTGTCATGGTCTGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: HPHQSEESPEGPSYQ*WSERSPSTLSWSGD Trigger: ATCACCAGACCATGACAACGTGGATGGAGATCTTTCGGACCATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTGATGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR TCA 90 bp | ATCCCTTCCACAATGTTGTCACGGATCTGCTGCCGGTCGTTCTCATaGATATTGAATGGAAATATCACTTCTCCTGGTGGAGGCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: IPSTMLSRICCRSFS*ILNGNITSPGGGSL Trigger: CAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAGCAGATCCGTGACAACATTGTGGAAGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CCA 90 bp | AATGTTGTCACGGATCTGCTGCCGGTCGTTCTCATGAATATTGAATaGAAATATCACTTCTCCTGGTGGAGGCTCCCTGTCTGGCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: NVVTDLLPVVLMNIE*KYHFSWWRLPVWPV Trigger: TACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAGCAGATCCGTGACAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR GCA 90 bp | TTGAAGGAAGCAAGGATGCTTCTGAAGCCAGAGACCCGCACCACCTaGCTGACAGTCAACTCACCAAGTAAAATGCAGAATGAAATGACA | + |
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Preference number: 1 (lower is better) Translates to: LKEARMLLKPETRTT*LTVNSPSKMQNEMT Trigger: TGTCATTTCATTCTGCATTTTACTTGGTGAGTTGACTGTCAGGCAGGTGGTGCGGGTCTCTGGCTTCAGAAGCATCCTTGCTTCCTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR CCA 90 bp | AATATTGAATGGAAATATCACTTCTCCTGGTGGAGGCTCCCTGTCTaGCCAGTATTGTGTCACCATGTTCTTCAGGTAGATGGCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NIEWKYHFSWWRLPV*PVLCHHVLQVDGSC Trigger: GCAGCTGCCATCTACCTGAAGAACATGGTGACACAATACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CCA 90 bp | CCGGTCGTTCTCATGAATATTGAATGGAAATATCACTTCTCCTGGTaGAGGCTCCCTGTCTGGCCAGTATTGTGTCACCATGTTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: PVVLMNIEWKYHFSW*RLPVWPVLCHHVLQ Trigger: CTGAAGAACATGGTGACACAATACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CCA 90 bp | CTGCCGGTCGTTCTCATGAATATTGAATGGAAATATCACTTCTCCTaGTGGAGGCTCCCTGTCTGGCCAGTATTGTGTCACCATGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LPVVLMNIEWKYHFS*WRLPVWPVLCHHVL Trigger: AAGAACATGGTGACACAATACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR TCA 90 bp | AACCACAGATGTCTTGTGAAAAACCAGAGCCTAAATTCCAAGCCTTaGAAGAAGCCTCTGAGCACAGGGTGGTTGAAGGAAGCAAGGATG | + |
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Preference number: 1 (lower is better) Translates to: NHRCLVKNQSLNSKP*KKPLSTGWLKEARM Trigger: CATCCTTGCTTCCTTCAACCACCCTGTGCTCAGAGGCTTCTTTCAAGGCTTGGAATTTAGGCTCTGGTTTTTCACAAGACATCTGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR TCA 90 bp | TCATATTCTGCTCTTGAACAGTTCAGGAAGAGCCATCTGCAATACTaGCATCATCAGTCACCTATTCACCCAGCTGACCGAGAGACCAAC | + |
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Preference number: 1 (lower is better) Translates to: SYSALEQFRKSHLQY*HHQSPIHPADRETN Trigger: GTTGGTCTCTCGGTCAGCTGGGTGAATAGGTGACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR GCA 90 bp | ACAGTGGTTCATATTCTGCTCTTGAACAGTTCAGGAAGAGCCATCTaGAATACTGACATCATCAGTCACCTATTCACCCAGCTGACCGAG | + |
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Preference number: 1 (lower is better) Translates to: TVVHILLLNSSGRAI*NTDIISHLFTQLTE Trigger: CTCGGTCAGCTGGGTGAATAGGTGACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGAACCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR CCA 90 bp | CTAAGCCTAGTGACCAACAAGTCCCTGCTGCTGGCTGCCGAGAGGTaGGTAAAGTCTGAACTTAGCAGGTTATCAATATTATCAATACAC | + |
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Preference number: 1 (lower is better) Translates to: LSLVTNKSLLLAAER*VKSELSRLSILSIH Trigger: GTGTATTGATAATATTGATAACCTGCTAAGTTCAGACTTTACCCACCTCTCGGCAGCCAGCAGCAGGGACTTGTTGGTCACTAGGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR TCA 90 bp | TTTTCATTTTGCCAGATGAAAGCACAGTGGTTCATATTCTGCTCTTaGACAGTTCAGGAAGAGCCATCTGCAATACTGACATCATCAGTC | + |
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Preference number: 1 (lower is better) Translates to: FSFCQMKAQWFIFCS*TVQEEPSAILTSSV Trigger: GACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGAACCACTGTGCTTTCATCTGGCAAAATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR GCA 90 bp | TTTTATATTCATATGTCTTCACCAGCTGATATAAGCACAGTAAACTaGCAAGCCAGCTCCCACTGTTTGGTGACTGCAAGTAGTAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: FYIHMSSPADISTVN*QASSHCLVTASSSL Trigger: TAGACTACTACTTGCAGTCACCAAACAGTGGGAGCTGGCTTGGCAGTTTACTGTGCTTATATCAGCTGGTGAAGACATATGAATATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CCA 90 bp | CCCAGAAATCACCTTCTGCTTAGAACTTCGGTGTGCTTTCATATTTaGATGCCCACAATTCCTGTAGTATCATTTAAGCACATGATTCAT | + |
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Preference number: 1 (lower is better) Translates to: PRNHLLLRTSVCFHI*MPTIPVVSFKHMIH Trigger: ATGAATCATGTGCTTAAATGATACTACAGGAATTGTGGGCATCCAAATATGAAAGCACACCGAAGTTCTAAGCAGAAGGTGATTTCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTTCCATACCGTTCAAAGAGACGAGCGACAATGTGCAGAGCCCACTTCTCAGGTAGATGGCAGCTaGCTGACGCACAGGGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LGFHTVQRDERQCAEPTSQVDGS*LTHREL Trigger: GAGTTCCCTGTGCGTCAGGCAGCTGCCATCTACCTG...AGAAGTGGGCTCTGCACATTGTCGCTCGTCTCTTTGAACGGTATGGAAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTTCCATACCGTTCAAAGAGACGAGCGACAATGTGCAGAGCCCACTTCTCCACCACACCAGCTCTaGCCGGTCATCCTCATCAAT | + |
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Preference number: 2 (lower is better) Translates to: LGFHTVQRDERQCAEPTSPPHQL*PVILIN Trigger: ATTGATGAGGATGACCGGCCAGAGCTGGTGTGGTGG...AGAAGTGGGCTCTGCACATTGTCGCTCGTCTCTTTGAACGGTATGGAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CAA 90 bp | TGGAAATATCACTTCTCCTGGTGGAGGCTCCCTGTCTGGCCAGTATaGTGTCACCATGTTCTTCAGGTAGATGGCAGCTGCCTGACGCAC | + |
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Preference number: 2 (lower is better) Translates to: WKYHFSWWRLPVWPV*CHHVLQVDGSCLTH Trigger: GTGCGTCAGGCAGCTGCCATCTACCTGAAGAACATGGTGACACAATACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTTCCATACCGTTCAAAGAGACGAGCGACAATGTGCAGAGCCCACTTCTTGTTCTTCAGGTAGATaGCAGCTGCCTGACGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LGFHTVQRDERQCAEPTSCSSGR*QLPDAQ Trigger: CTGTGCGTCAGGCAGCTGCCATCTACCTGAAGAACA...AGAAGTGGGCTCTGCACATTGTCGCTCGTCTCTTTGAACGGTATGGAAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTTCCATACCGTTCAAAGAGACGAGCGACAATGTGCAGAGCCCACTTCTTGGAGGCTCCCTGTCTaGCCAGTATTGTGTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: LGFHTVQRDERQCAEPTSWRLPV*PVLCHH Trigger: ATGGTGACACAATACTGGCCAGACAGGGAGCCTCCA...AGAAGTGGGCTCTGCACATTGTCGCTCGTCTCTTTGAACGGTATGGAAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCCACGTTGTCATGGTCTGGTGATTCACCAGCTGAAGAGGCAGTGCATAACCACTGCAGGCCAGTaGCCAGGAAAATCGTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LHPRCHGLVIHQLKRQCITTAGQ*PGKSCL Trigger: TAGACACGATTTTCCTGGTCACTGGCCTGCAGTGGT...TATGCACTGCCTCTTCAGCTGGTGAATCACCAGACCATGACAACGTGGATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR CAA 90 bp | CCAGCTGATATAAGCACAGTAAACTGCCAAGCCAGCTCCCACTGTTaGGTGACTGCAAGTAGTAGTCTATCTTGTCGACCACTGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PADISTVNCQASSHC*VTASSSLSCRPLQA Trigger: GGCCTGCAGTGGTCGACAAGATAGACTACTACTTGCAGTCACCAAACAGTGGGAGCTGGCTTGGCAGTTTACTGTGCTTATATCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATCCACGTTGTCATGGTCTGGTGATTCACCAGCTGAAGAGGCAGTGCATACTAGGCAGAAATATCTaGATGGCTGCCAGGAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: LHPRCHGLVIHQLKRQCILGRNI*MAARRG Trigger: ACCTCTCCTGGCAGCCATGCAGATATTTCTGCCTAG...TATGCACTGCCTCTTCAGCTGGTGAATCACCAGACCATGACAACGTGGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCATCCACGTTGTCATGGTCTGGTGATTCACCAGCTGAAGAGGCAGTGCATAATAAGCACAGTAAACTaGCAAGCCAGCTCCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LHPRCHGLVIHQLKRQCIISTVN*QASSHC Trigger: ACAGTGGGAGCTGGCTTGGCAGTTTACTGTGCTTAT...TATGCACTGCCTCTTCAGCTGGTGAATCACCAGACCATGACAACGTGGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR CCA 90 bp | GTCGACCACTGCAGGCCAGTGACCAGGAAAATCGTGTCTAATGATGACTCGGAGGACTCTCACCAAATCTaGAGACCGAATTATCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VDHCRPVTRKIVSNDDSEDSHQI*RPNYPF Trigger: GAAGGGATAATTCGGTCTCCAGATTTGGTGAGAGTC...CTCCGAGTCATCATTAGACACGATTTTCCTGGTCACTGGCCTGCAGTGGTCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGACACAGCCTCTTATTaGCTTCTTGGCCCTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: CNLEANLGCIQRQTLSHKDTASY*LLGPQP Trigger: GGGTTGAGGGCCAAGAAGGCAATAAGAGGCTGTGTC...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTCAGTGGCCAGGAGGCTaGGTCAGGACTGCAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: RAITKTNKLNQAGEISDCQWPGG*VRTAIL Trigger: CAAGATTGCAGTCCTGACTCAGCCTCCTGGCCACTG...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCATCAATCTGAAGAGTCTCCGGAGGGACCGTCCTATCAATGATGGTCCGTGCCGGTCGTTCTCATaGATATTGAATGGAAATATC | + |
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Preference number: 2 (lower is better) Translates to: ILINLKSLRRDRPINDGPCRSFS*ILNGNI Trigger: GATATTTCCATTCAATATTCATGAGAACGACCGGCA...CGGACCATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTGATGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGCCCGCACCACCTGCCTaGCAGTCAACTCACCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKPAPPA*QSTHQV Trigger: TACTTGGTGAGTTGACTGTCAGGCAGGTGGTGCGGG...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTTCCACCACACCAGCTCTGGCCGGTCATCCTCATCAATCTGAAGAGTCTCCTCATGAATATTGAATaGAAATATCACTTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TLPPHQLWPVILINLKSLLMNIE*KYHFSW Trigger: CCAGGAGAAGTGATATTTCCATTCAATATTCATGAG...GAGACTCTTCAGATTGATGAGGATGACCGGCCAGAGCTGGTGTGGTGGAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATCCCGCACCACCTGCCTaGCAGTCAACTCACCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHPAPPA*QSTHQV Trigger: TACTTGGTGAGTTGACTGTCAGGCAGGTGGTGCGGG...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGACACAGCCTCTTATTaGCTTCTTGGCCCTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: RAITKTNKLNQAGEISDCDTASY*LLGPQP Trigger: GGGTTGAGGGCCAAGAAGGCAATAAGAGGCTGTGTC...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGCAGCTTTGGTGCCCTaGAAAATGAGAGATGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLAALVP*KMRDGK Trigger: TTTGCCATCTCTCATTTTTCAGGGCACCAAAGCTGC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR CAA 90 bp | GTTTTCATTTTGCCAGATGAAAGCACAGTGGTTCATATTCTGCTCTaGAACAGTTCAGGAAGAGCCATCTGCAATACTGACATCATCAGT | + |
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Preference number: 2 (lower is better) Translates to: VFILPDESTVVHILL*NSSGRAICNTDIIS Trigger: ACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGAACCACTGTGCTTTCATCTGGCAAAATGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCTGAAACCCCTTCAATaGAATCTTGCCCTTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLLKPLQ*NLALLT Trigger: AGTTAGAAGGGCAAGATTGCATTGAAGGGGTTTCAG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGGAAGGCACTGTTATCTaGATAAATCCACTGATTCTT | + |
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Preference number: 2 (lower is better) Translates to: QAGEISDCEKQMVKLDLLEGTVI*INPLIL Trigger: AAGAATCAGTGGATTTATGCAGATAACAGTGCCTTC...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGTCCACTGATTCTTCATaGCAAAAACCTGAGACATGC | + |
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Preference number: 2 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKSTDSS*QKPETC Trigger: GCATGTCTCAGGTTTTTGCCATGAAGAATCAGTGGA...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTTCATATTCTGCTCTTaGACAGTTCAGGAAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHFIFCS*TVQEEP Trigger: TGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGAA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTCCACTGATTCTTCATaGCAAAAACCTGAGACATGC | + |
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Preference number: 2 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHSTDSS*QKPETC Trigger: GCATGTCTCAGGTTTTTGCCATGAAGAATCAGTGGA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGGAAGGCACTGTTATCTaGATAAATCCACTGATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKEGTVI*INPLIL Trigger: AAGAATCAGTGGATTTATGCAGATAACAGTGCCTTC...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGATGGAAATTTAAGCTaGAGGTATTTCACACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLDGNLS*RYFTQT Trigger: TGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CCA 72 bp | AGGGTAAGAAGGGTCAAGGAAGGGAGAGCAGGCCCGTaGCCGCCTGATGCCAATGACACAGCCTCTTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVRRVKEGRAGP*PPDANDTASYC Trigger: GCAATAAGAGGCTGTGTCATTGGCATCAGGCGGCCACGGGCCTGCTCTCCCTTCCTTGACCCTTCTTACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR TCA 72 bp | CACCACACCAGCTCTGGCCGGTCATCCTCATCAATCTaGAGAGTCTCCGGAGGGACCGTCCTATCAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: HHTSSGRSSSSI*RVSGGTVLSMM Trigger: CATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTGATGAGGATGACCGGCCAGAGCTGGTGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR GCA 72 bp | GGTGTGTTAACAGTGGCCAGGAGGCTGAGTCAGGACTaGAATCTTGAGGCCAACCTGGGTTGCATACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GVLTVARRLSQD*NLEANLGCIQR Trigger: TCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCAGTCCTGACTCAGCCTCCTGGCCACTGTTAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCCTCATCAATCTGAAGAGTCTCCGGAGGGACCGTCCTATCAATGATGGTATCCCTTCCACAATGTaGTCACGGATCTGCTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VILINLKSLRRDRPINDGIPSTM*SRICCR Trigger: CCGGCAGCAGATCCGTGACAACATTGTGGAAGGGAT...ACCATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTGATGAGGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCTTCCATACCGTTCAAAGAGACGAGCGACAATGTGCAGAGCCCACTTCTAAGCAGCTGCAGGATTaGCTGTTGAATTCTAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGFHTVQRDERQCAEPTSKQLQD*LLNSRQ Trigger: CTGCCTAGAATTCAACAGCAAATCCTGCAGCTGCTT...AGAAGTGGGCTCTGCACATTGTCGCTCGTCTCTTTGAACGGTATGGAAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR TCA 72 bp | CAATCTGAAGAGTCTCCGGAGGGACCGTCCTATCAATaGTGGTCCGAAAGATCTCCATCCACGTTGTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: QSEESPEGPSYQ*WSERSPSTLSW Trigger: CCATGACAACGTGGATGGAGATCTTTCGGACCATCATTGATAGGACGGTCCCTCCGGAGACTCTTCAGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR TCA 72 bp | TGTCACGGATCTGCTGCCGGTCGTTCTCATGAATATTaGATGGAAATATCACTTCTCCTGGTGGAGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CHGSAAGRSHEY*MEISLLLVEAP Trigger: GGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAGCAGATCCGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR CCA 72 bp | ACGGATCTGCTGCCGGTCGTTCTCATGAATATTGAATaGAAATATCACTTCTCCTGGTGGAGGCTCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TDLLPVVLMNIE*KYHFSWWRLPV Trigger: GACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAGAACGACCGGCAGCAGATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR TCA 72 bp | GCTCTTGAACAGTTCAGGAAGAGCCATCTGCAATACTaGCATCATCAGTCACCTATTCACCCAGCTGACCGA | + |
|
Preference number: 3 (lower is better) Translates to: ALEQFRKSHLQY*HHQSPIHPADR Trigger: TCGGTCAGCTGGGTGAATAGGTGACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CCA 72 bp | GTGACCAACAAGTCCCTGCTGCTGGCTGCCGAGAGGTaGGTAAAGTCTGAACTTAGCAGGTTATCAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: VTNKSLLLAAER*VKSELSRLSIL Trigger: TAATATTGATAACCTGCTAAGTTCAGACTTTACCCACCTCTCGGCAGCCAGCAGCAGGGACTTGTTGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGCCTAAATTCCAAGCCTaGAAAGAAGCCTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AILRPTWVAYRDRLYLTKPKFQA*KEASEH Trigger: GTGCTCAGAGGCTTCTTTCAAGGCTTGGAATTTAGG...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGGTCAGGACTGCAATCTaGAGGCCAACCTGGGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QAGEISDCEKQMVKLDLLVRTAI*RPTWVA Trigger: TGCAACCCAGGTTGGCCTCAAGATTGCAGTCCTGAC...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGCTGAGCACAGGGTGGTaGAAGGAAGCAAGGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QAGEISDCEKQMVKLDLLLSTGW*KEARML Trigger: AAGCATCCTTGCTTCCTTCAACCACCCTGTGCTCAG...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR TCA 72 bp | TGTCTTGTGAAAAACCAGAGCCTAAATTCCAAGCCTTaGAAGAAGCCTCTGAGCACAGGGTGGTTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CLVKNQSLNSKP*KKPLSTGWLKE Trigger: TTCCTTCAACCACCCTGTGCTCAGAGGCTTCTTTCAAGGCTTGGAATTTAGGCTCTGGTTTTTCACAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CCA 72 bp | CTCATGAATATTGAATGGAAATATCACTTCTCCTGGTaGAGGCTCCCTGTCTGGCCAGTATTGTGTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LMNIEWKYHFSW*RLPVWPVLCHH Trigger: ATGGTGACACAATACTGGCCAGACAGGGAGCCTCCACCAGGAGAAGTGATATTTCCATTCAATATTCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGCCTCTTATTGCCTTCTaGGCCCTCAACCCATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: QAGEISDCEKQMVKLDLLPLIAF*ALNPCT Trigger: AGTACATGGGTTGAGGGCCAAGAAGGCAATAAGAGG...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCTGAGCACAGGGTGGTaGAAGGAAGCAAGGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLLSTGW*KEARML Trigger: AAGCATCCTTGCTTCCTTCAACCACCCTGTGCTCAG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR TCA 72 bp | TGCCAGATGAAAGCACAGTGGTTCATATTCTGCTCTTaGACAGTTCAGGAAGAGCCATCTGCAATACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: CQMKAQWFIFCS*TVQEEPSAILT Trigger: TGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATGAACCACTGTGCTTTCATCTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR GCA 72 bp | CATATTCTGCTCTTGAACAGTTCAGGAAGAGCCATCTaGAATACTGACATCATCAGTCACCTATTCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HILLLNSSGRAI*NTDIISHLFTQ Trigger: CTGGGTGAATAGGTGACTGATGATGTCAGTATTGCAGATGGCTCTTCCTGAACTGTTCAAGAGCAGAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CCA 72 bp | AGGCACTGTTATCTGCATAAATCCACTGATTCTTCATaGCAAAAACCTGAGACATGCGCCGATACACAACTC | + |
|
Preference number: 3 (lower is better) Translates to: RHCYLHKSTDSS*QKPETCADTQL Trigger: GAGTTGTGTATCGGCGCATGTCTCAGGTTTTTGCCATGAAGAATCAGTGGATTTATGCAGATAACAGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCCTCTTATTGCCTTCTaGGCCCTCAACCCATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLPLIAF*ALNPCT Trigger: AGTACATGGGTTGAGGGCCAAGAAGGCAATAAGAGG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CCA 72 bp | CACCTTCTGCTTAGAACTTCGGTGTGCTTTCATATTTaGATGCCCACAATTCCTGTAGTATCATTTAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HLLLRTSVCFHI*MPTIPVVSFKH Trigger: GTGCTTAAATGATACTACAGGAATTGTGGGCATCCAAATATGAAAGCACACCGAAGTTCTAAGCAGAAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAAATTCCAAGCCTaGAAAGAAGCCTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKPKFQA*KEASEH Trigger: GTGCTCAGAGGCTTCTTTCAAGGCTTGGAATTTAGG...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAATTAAGAGCAGACGCTTaGTCCTTTCCAATCAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: AITKTNKLNQAGEISDCELRADA*SFPIND Trigger: GTCATTGATTGGAAAGGACAAAGCGTCTGCTCTTAA...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CAA 72 bp | CGCCGATCGGTGAACGGTGGATGCGCCTTCCAGTTGTaGCTGGGCACGACTCCAAAATTAAACGTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSVNGGCAFQL*LGTTPKLNVEK Trigger: CTTCTCCACGTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCACCGATCGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACGATCAGCGACTGCAGTaGAAGGGCAGCTTCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNDQRLQ*KGSFHL Trigger: AAGGTGGAAGCTGCCCTTGCACTGCAGTCGCTGATC...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACGTGCTCCTTGGCTTGTaGCTGGTTGGAGATCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNVLLGL*LVGDQR Trigger: TCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCAC...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GTCGACCACTGCAGGCCAGTGACCAGGAAAATCGTGTCTAATGATGACTCGGAGAAGCTCCGTCTCAGCTaGAATTCTCAGCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VDHCRPVTRKIVSNDDSEKLRLS*NSQLWV Trigger: GACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTT...CTCCGAGTCATCATTAGACACGATTTTCCTGGTCACTGGCCTGCAGTGGTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCTCGGCATCTTCTCCTaGCTCTCCACACAGTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNLGIFS*LSTQYL Trigger: AAGGTACTGTGTGGAGAGGCAGGAGAAGATGCCGAG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCGTGTAGCACAGACCTaGTTCAGGCCAAGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNRVAQT*FRPRKR Trigger: CCTTTTCCTTGGCCTGAAGCAGGTCTGTGCTACACG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTGGAGACCGAATTATCCCTTCCACAATGTTGTCACGGATCTGCTGGTGCCCTTCAGCGCCTaGATGATCCGATTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQIWRPNYPFHNVVTDLLVPFSA*MIRLRS Trigger: GGACCTCAATCGGATCATCCAGGCGCTGAAGGGCAC...CAGCAGATCCGTGACAACATTGTGGAAGGGATAATTCGGTCTCCAGATTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGTGAAACTGCCCTGCTaGCAGTGTCCTTCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNLEANLGCIQRQTLSHKVKLPC*QCPSVL Trigger: GAGCACCGAAGGACACTGGCAGCAGGGCAGTTTCAC...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACACTTGCTCCAGTGTATaGAACAGCAGTTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNTCSSV*NSSSGL Trigger: CAGCCCTGAACTGCTGTTCCATACACTGGAGCAAGT...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGTCATCCTCATCAATCTaGAGAGTCTCCGGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKSSSSI*RVSGGT Trigger: GGTCCCTCCGGAGACTCTTCAGATTGATGAGGATGA...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGTTTTCTGATCCTCACTaGGTGGTGCCACCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKFSDPH*VVPPAA Trigger: AGCTGCTGGTGGCACCACTCAGTGAGGATCAGAAAA...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACATAAGCACAGTAAACTaGCAAGCCAGCTCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNISTVN*QASSHC Trigger: ACAGTGGGAGCTGGCTTGGCAGTTTACTGTGCTTAT...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGACGTACGGTTTCATGTaGTCCTTGGCTTGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKTYGFM*SLACAW Trigger: CCAGGCACAAGCCAAGGAGCACATGAAACCGTACGT...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTGTCCTTCGGTGCTCTaGCAACGTGTACACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLCPSVL*QRVHLL Trigger: CAGGAGGTGTACACGTTGGCAGAGCACCGAAGGACA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CTCCATCCACGTTGTCATGGTCTGGTGATTCACCAGCTGAAGAGGCAGTGCATATGCAATTCTCAGCTTTaGGTCGATAGTGCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHPRCHGLVIHQLKRQCICNSQL*VDSALQ Trigger: CTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCA...TATGCACTGCCTCTTCAGCTGGTGAATCACCAGACCATGACAACGTGGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS-3UTR CCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTGTTCTTCAGGTAGATaGCAGCTGCCTGACGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLCSSGR*QLPDAQ Trigger: CTGTGCGTCAGGCAGCTGCCATCTACCTGAAGAACA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGATCTCAGCCAAGTGCTaGGTTGTGTCGACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLISAKC*VVSTAM Trigger: CATCGCTGTCGACACAACCCAGCACTTGGCTGAGAT...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACACATCTGCGGGGAGATaGTATGGCAGGTTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNTSAGR*YGRLNC Trigger: ACAATTTAACCTGCCATACCATCTCCCCGCAGATGT...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCCTTCCTGCACATTGTaGACAAGACTTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNPSCTL*TRLLNA Trigger: AGCATTTAGAAGTCTTGTTCACAATGTGCAGGAAGG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGCAGGTAGATGGCAGCTaGCTGACGCACAGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLQVDGS*LTHREL Trigger: GAGTTCCCTGTGCGTCAGGCAGCTGCCATCTACCTG...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTATCTTGTCGACCACTaGAGGCCAGTGACCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLYLVDH*RPVTRK Trigger: TTTCCTGGTCACTGGCCTGCAGTGGTCGACAAGATA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGCAGCTGAAGAGGCAGTaGATACTGAACGAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKQLKRQ*ILNESI Trigger: TATGCTCTCGTTCAGTATGCACTGCCTCTTCAGCTG...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGAGGAGCTGCCACATCTaGGGGGAGATGGTATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLRSCHI*GEMVWQ Trigger: CTGCCATACCATCTCCCCGCAGATGTGGCAGCTCCT...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGGGAGGGGAGGATCTGTaGAGCCACAGCATCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKGGEDL*SHSIHG Trigger: GCCGTGGATGCTGTGGCTGCACAGATCCTCCCCTCC...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGAAATATCTGCATGGCTaGCAGGAGAGGTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKKYLHG*QERFSF Trigger: GAAAGAGAACCTCTCCTGGCAGCCATGCAGATATTT...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTAGGAGCTGCCACATCTaGGGGGAGATGGTATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCRSCHI*GEMVWQ Trigger: CTGCCATACCATCTCCCCGCAGATGTGGCAGCTCCT...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATGGAGGGGAGGATCTGTaGAGCCACAGCATCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHGGEDL*SHSIHG Trigger: GCCGTGGATGCTGTGGCTGCACAGATCCTCCCCTCC...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGTGCCCTTCAGCGCCTaGATGATCCGATTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLVPFSA*MIRLRS Trigger: GGACCTCAATCGGATCATCCAGGCGCTGAAGGGCAC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTGCAATTCTCAGCTTTaGGTCGATAGTGCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLCNSQL*VDSALQ Trigger: CTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAACAGGGAACTCCACATaGTCAGAGACTATGATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CNLEANLGCIQRQTLSHKTGNST*SETMIR Trigger: TCGGATCATAGTCTCTGACCATGTGGAGTTCCCTGT...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCAATCAGGCTCTTCTTaGCTAATTCTACTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNQSGSS*LILLHF Trigger: GAAATGCAGTAGAATTAGCCAAGAAGAGCCTGATTG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCTGCTGTATAATCTCTaGATGATCTTCCACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNLLYNL*MIFHNC Trigger: ACAGTTGTGGAAGATCATCCAGAGATTATACAGCAG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTGCGGGGAGATGGTATaGCAGGTTAAATTGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLCGEMV*QVKLYA Trigger: GGCATACAATTTAACCTGCCATACCATCTCCCCGCA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGGGGTTGTGTGGCAGCTaGACTTGCTCCAGTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLGLCGS*TCSSVW Trigger: CCATACACTGGAGCAAGTCCAGCTGCCACACAACCC...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| 3UTR CAA 72 bp | ATAAGCACAGTAAACTGCCAAGCCAGCTCCCACTGTTaGGTGACTGCAAGTAGTAGTCTATCTTGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTVNCQASSHC*VTASSSLSCRP Trigger: TGGTCGACAAGATAGACTACTACTTGCAGTCACCAAACAGTGGGAGCTGGCTTGGCAGTTTACTGTGCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCATGGTCAGAGACTATaGTCCGAAGCAAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLHGQRL*SEASWG Trigger: CCCCCAGCTTGCTTCGGATCATAGTCTCTGACCATG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACGTAAAACAAGATCAATaGTTCGTAGGCAGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNVKQDQ*FVGRCS Trigger: AGAACATCTGCCTACGAATCATTGATCTTGTTTTAC...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGCCTTCCTGCACATTGTaGACAAGACTTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKPSCTL*TRLLNA Trigger: AGCATTTAGAAGTCTTGTTCACAATGTGCAGGAAGG...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGATCAGCGACTGCAGTaGAAGGGCAGCTTCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCDQRLQ*KGSFHL Trigger: AAGGTGGAAGCTGCCCTTGCACTGCAGTCGCTGATC...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGTGCTCCTTGGCTTGTaGCTGGTTGGAGATCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLVLLGL*LVGDQR Trigger: TCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCAC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGGCTGTAGTAAAGAGCTaGGATGGCCACCTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLAVVKS*DGHLET Trigger: TGTCTCCAGGTGGCCATCGCAGCTCTTTACTACAGC...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGTGGAGGCTCCCTGTCTaGCCAGTATTGTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLWRLPV*PVLCHH Trigger: ATGGTGACACAATACTGGCCAGACAGGGAGCCTCCA...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCCACCACACCAGCTCTaGCCGGTCATCCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLPPHQL*PVILIN Trigger: ATTGATGAGGATGACCGGCCAGAGCTGGTGTGGTGG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTTCCTTGGCTTGTGCCTaGTTGGAGATCAGCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCSLACA*LEISDC Trigger: GCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGA...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAGGACTTTCTCTGCTTTTaGGTGATTTTCACGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AILRPTWVAYRDRLYLTKDFLCF*VIFTVY Trigger: GTAAACCGTGAAAATCACTCAAAAGCAGAGAAAGTC...CTTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGCTAGGCAGAAATATCTaGATGGCTGCCAGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLLGRNI*MAARRG Trigger: ACCTCTCCTGGCAGCCATGCAGATATTTCTGCCTAG...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGACGTACGGTTTCATGTaGTCCTTGGCTTGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLTYGFM*SLACAW Trigger: CCAGGCACAAGCCAAGGAGCACATGAAACCGTACGT...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCTCGGCATCTTCTCCTaGCTCTCCACACAGTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLLGIFS*LSTQYL Trigger: AAGGTACTGTGTGGAGAGGCAGGAGAAGATGCCGAG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAATGTCCTTCGGTGCTCTaGCAACGTGTACACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCECPSVL*QRVHLL Trigger: CAGGAGGTGTACACGTTGGCAGAGCACCGAAGGACA...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAGGGTTGTGTGGCAGCTaGACTTGCTCCAGTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEGLCGS*TCSSVW Trigger: CCATACACTGGAGCAAGTCCAGCTGCCACACAACCC...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGTGTGACTGCATAGCTTaGGCACTCACACTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLCDCIA*ALTLVS Trigger: AGAGACAAGTGTGAGTGCTCAAGCTATGCAGTCACA...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGTTTTCTGATCCTCACTaGGTGGTGCCACCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKFSDPH*VVPPAA Trigger: AGCTGCTGGTGGCACCACTCAGTGAGGATCAGAAAA...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTAAGCTCCGTCTCAGCTaGAATTCTCAGCTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCKLRLS*NSQLWV Trigger: GACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTT...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGTCATACGGATCTTCTTaGCACAGCTCTTCATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLSYGSS*HSSSSS Trigger: CGAGGATGAAGAGCTGTGGCAAGAAGATCCGTATGA...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTCCTTGGCTTGTGCCTaGTTGGAGATCAGCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHSLACA*LEISDC Trigger: GCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATACCACTGCAGGCCAGTaGCCAGGAAAATCGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHTTAGQ*PGKSCL Trigger: TAGACACGATTTTCCTGGTCACTGGCCTGCAGTGGT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTTGTGACTGCATAGCTTaGGCACTCACACTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCCDCIA*ALTLVS Trigger: AGAGACAAGTGTGAGTGCTCAAGCTATGCAGTCACA...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGTGCAGCTTTCTTTTCTaGTCCTCACTGAGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKCSFLF*SSLSGA Trigger: GGCACCACTCAGTGAGGATCAGAAAAGAAAGCTGCA...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGAGACGAGCGACAATGTaGAGAGCCCACTTCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKRRATM*RAHFLH Trigger: GTGTAAGAAGTGGGCTCTGCACATTGTCGCTCGTCT...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATGCTGTAGTAAAGAGCTaGGATGGCCACCTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHAVVKS*DGHLET Trigger: TGTCTCCAGGTGGCCATCGCAGCTCTTTACTACAGC...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATCGTGTAGCACAGACCTaGTTCAGGCCAAGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHRVAQT*FRPRKR Trigger: CCTTTTCCTTGGCCTGAAGCAGGTCTGTGCTACACG...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATATCTCAGCCAAGTGCTaGGTTGTGTCGACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHISAKC*VVSTAM Trigger: CATCGCTGTCGACACAACCCAGCACTTGGCTGAGAT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGAATAGCGGGATACACTaGTCAATTCCCCTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGEISDCEKQMVKLDLLNSGIH*SIPLPL Trigger: CAAAGGAAGGGGAATTGACCAGTGTATCCCGCTATT...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTGCAGCTTTCTTTTCTaGTCCTCACTGAGTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHCSFLF*SSLSGA Trigger: GGCACCACTCAGTGAGGATCAGAAAAGAAAGCTGCA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTCTTCAAAGAACTAAATaGATGCAGCACCCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCLQRTK*MQHPAG Trigger: TCCTGCTGGGTGCTGCATGCATTTAGTTCTTTGAAG...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGATATGCAGCAGCTCCTaGATGATGAATCTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLICSSS*MMNLTY Trigger: GTACGTGAGATTCATCATGCAGGAGCTGCTGCATAT...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR GCA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAAACAAGACTTCTAAATaGTTTGGATTTGACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNLEANLGCIQRQTLSHKNKTSK*FGFDSR Trigger: TCTGCTGTCAAATCCAAAGCATTTAGAAGTCTTGTT...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAACTCATGAATATTGAATaGAAATATCACTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNLEANLGCIQRQTLSHKLMNIE*KYHFSW Trigger: CCAGGAGAAGTGATATTTCCATTCAATATTCATGAG...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTAATAGCGGGATACACTaGTCAATTCCCCTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCNSGIH*SIPLPL Trigger: CAAAGGAAGGGGAATTGACCAGTGTATCCCGCTATT...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATACTTGCTCCAGTGTATaGAACAGCAGTTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHTCSSV*NSSSGL Trigger: CAGCCCTGAACTGCTGTTCCATACACTGGAGCAAGT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGTTCCTCCTCCTCACTTaGAATCTCCTCATTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKFLLLT*NLLIFL Trigger: GAGGAAAATGAGGAGATTTCAAGTGAGGAGGAGGAA...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAATTCCTCCTCCTCACTTaGAATCTCCTCATTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEFLLLT*NLLIFL Trigger: GAGGAAAATGAGGAGATTTCAAGTGAGGAGGAGGAA...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAATATGTGGCTTCATCTaGTTCCAAGTCACAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEICGFI*FQVTAW Trigger: CCATGCTGTGACTTGGAAGCAGATGAAGCCACATAT...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAGACTCTCACCAAATCTaGAGACCGAATTATCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEDSHQI*RPNYPF Trigger: GAAGGGATAATTCGGTCTCCAGATTTGGTGAGAGTC...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTGCGGGGAGATGGTATaGCAGGTTAAATTGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHCGEMV*QVKLYA Trigger: GGCATACAATTTAACCTGCCATACCATCTCCCCGCA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAACATCTGCGGGGAGATaGTATGGCAGGTTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCETSAGR*YGRLNC Trigger: ACAATTTAACCTGCCATACCATCTCCCCGCAGATGT...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGTGCAGGATTTGCTGTTaGATTCTAGGCAGAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLCRICC*ILGRNI Trigger: GATATTTCTGCCTAGAATTCAACAGCAAATCCTGCA...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAACGAAGTATTCTTTTGTaGCATTTCCTGGGCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCERSILL*HFLGFH Trigger: ATGGAAGCCCAGGAAATGTCACAAAAGAATACTTCG...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGCTTGGTTTAGATAGTTaGAAGCTTGCTGAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLLGLDS*KLAEEH Trigger: GTGTTCTTCAGCAAGCTTTCAACTATCTAAACCAAG...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGACTTTCTCTGCTTTTaGGTGATTTTCACGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLDFLCF*VIFTVY Trigger: GTAAACCGTGAAAATCACTCAAAAGCAGAGAAAGTC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGAAAGAACTAAATGCATaGAGCACCCAGCAGGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKKELNA*STQQDL Trigger: TAGATCCTGCTGGGTGCTGCATGCATTTAGTTCTTT...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR GCA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATATATGCAGCAGCTCCTaGATGATGAATCTCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHICSSS*MMNLTY Trigger: GTACGTGAGATTCATCATGCAGGAGCTGCTGCATAT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTTTTTGTGACATTTCCTaGGCTTCCATACCGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCFCDIS*ASIPFK Trigger: TTTGAACGGTATGGAAGCCCAGGAAATGTCACAAAA...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAATGCCGGTCGTTCTCATaGATATTGAATGGAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCECRSFS*ILNGNI Trigger: GATATTTCCATTCAATATTCATGAGAACGACCGGCA...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR TCA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGGTAAAACAAGATCAATaGTTCGTAGGCAGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLVKQDQ*FVGRCS Trigger: AGAACATCTGCCTACGAATCATTGATCTTGTTTTAC...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR GCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAAAACTTCATATAAAATaGCCAGGAGCTGCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEKLHIK*PGAATS Trigger: AGATGTGGCAGCTCCTGGGCATTTTATATGAAGTTT...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGAAACTTCATATAAAATaGCCAGGAGCTGCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKKLHIK*PGAATS Trigger: AGATGTGGCAGCTCCTGGGCATTTTATATGAAGTTT...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CCA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGATATTCTGTATATGTaGCTTCATCTGCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAITKTNKLNQAGEISDCDILYM*LHLLPS Trigger: ACTTGGAAGCAGATGAAGCCACATATACAGAATATC...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS-3UTR CCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGCTGCTGTATAATCTCTaGATGATCTTCCACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKLLYNL*MIFHNC Trigger: ACAGTTGTGGAAGATCATCCAGAGATTATACAGCAG...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR TCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAGCTCAATTTGGTCCTTaGATAAACTCTTCTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCEAQFGP*INSSST Trigger: TGTTGAAGAAGAGTTTATTCAAGGACCAAATTGAGC...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS-3UTR TCA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAATGTATAATCTCTGGATaGTCTTCCACAACTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AITKTNKLNQAGEISDCECIISG*SSTTVK Trigger: CTTAACAGTTGTGGAAGATCATCCAGAGATTATACA...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR TCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGTGTATAATCTCTGGATaGTCTTCCACAACTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKCIISG*SSTTVK Trigger: CTTAACAGTTGTGGAAGATCATCCAGAGATTATACA...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGAGGAACAGCTCAATTTaGTCCTTGAATAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKRNSSI*SLNKLF Trigger: GAAGAGTTTATTCAAGGACCAAATTGAGCTGTTCCT...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS-3UTR GCA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGAACAAGACTTCTAAATaGTTTGGATTTGACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKNKTSK*FGFDSR Trigger: TCTGCTGTCAAATCCAAAGCATTTAGAAGTCTTGTT...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| 3UTR CAA 72 bp | ATCAAATTTCATCCTTATGTATTCATACGGATCTTCTaGCCACAGCTCTTCATCCTCGTCTTTATAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: IKFHPYVFIRIF*PQLFILVFITH Trigger: ATGTGTTATAAAGACGAGGATGAAGAGCTGTGGCAAGAAGATCCGTATGAATACATAAGGATGAAATTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| CDS GCA 90 bp | GGGAGGATCTGTGCAGCCACAGCATCCACGGCAGGAGGTCGGTTCTaGAGCTCCAAGAGCACACTCAGTCCTATTATACACATCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRICAATASTAGGRF*SSKSTLSPIIHIFR Trigger: CCGGAAGATGTGTATAATAGGACTGAGTGTGCTCTTGGAGCTGCAGAACCGACCTCCTGCCGTGGATGCTGTGGCTGCACAGATCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS TCA 90 bp | AAAACTGGTATTCATCCACACTGTTGTCCAGGTCCAGTGGGGTGCTaGAGCCCTCGAGGGCTGTCTCCTCCAGCACTTCTTCATCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTGIHPHCCPGPVGC*SPRGLSPPALLHPS Trigger: ACTGGGATGAAGAAGTGCTGGAGGAGACAGCCCTCGAGGGCTTCAGCACCCCACTGGACCTGGACAACAGTGTGGATGAATACCAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS CCA 90 bp | CGAAGCAAGCTGGTTAAGCTCCGTCTCAGCTGCAATTCTCAGCTTTaGGTCGATAGTGCCCTTCAGCGCCTGGATGATCCGATTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSKLVKLRLSCNSQL*VDSALQRLDDPIEV Trigger: GACCTCAATCGGATCATCCAGGCGCTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAGCTTGCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS CCA 90 bp | CTTGTAGGACTGGTTAAGCTCCGTCTCAGCTGCAATTCTCAGCTTTaGGTCGATAGTGCCCTTCAGCGCCTGGATGATCCGATTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGLVKLRLSCNSQL*VDSALQRLDDPIEV Trigger: GACCTCAATCGGATCATCCAGGCGCTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAGTCCTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000145960.2 |
||
| CDS CCA 90 bp | ATGATGAATCTCACGTACGGTTTCATGTGCTCCTTGGCTTGTGCCTaGTTGGAGATCAGCGACTGCAGTGCAAGGGCAGCTTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MMNLTYGFMCSLACA*LEISDCSARAASTL Trigger: CAAGGTGGAAGCTGCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS CCA 90 bp | AGTGTCATTCATCCACTGGTTTATGAACTGCGACGTGACGGGTCCTaGGTTGTGTGGCAGCTGGACTTGCTCCAGTGTATGGAACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVIHPLVYELRRDGS*VVWQLDLLQCMEQQ Trigger: CTGCTGTTCCATACACTGGAGCAAGTCCAGCTGCCACACAACCCAGGACCCGTCACGTCGCAGTTCATAAACCAGTGGATGAATGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 90 bp | ATATGCAGCAGCTCCTGCATGATGAATCTCACGTACGGTTTCATGTaGTCCTTGGCTTGTGCCTGGTTGGAGATCAGCGACTGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICSSSCMMNLTYGFM*SLACAWLEISDCSA Trigger: TGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTCATCATGCAGGAGCTGCTGCATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 90 bp | TCAGAGACTATGATCCGAAGCAAGCTGGTTAAGCTCCGTCTCAGCTaGAATTCTCAGCTTTGGGTCGATAGTGCCCTTCAGCGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SETMIRSKLVKLRLS*NSQLWVDSALQRLD Trigger: ATCCAGGCGCTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAGCTTGCTTCGGATCATAGTCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
||
| CDS TCA 90 bp | TTCATCCCAGTCGTCATCATCCTCCTCCTCACTTCTGCCAATTTGTaGCTGCATAGCTTGAGCACTCACACTTGTCTCTTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FIPVVIILLLTSANL*LHSLSTHTCLFLLL Trigger: GAGGAGGAGGAAGAGACAAGTGTGAGTGCTCAAGCTATGCAGTCACAAATTGGCAGAAGTGAGGAGGAGGATGATGACGACTGGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGATCCCTTCCACAATGTaGTCACGGATCTGCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLIPSTM*SRICCR Trigger: CCGGCAGCAGATCCGTGACAACATTGTGGAAGGGAT...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACTTCATACGGATCTTCTaGCCACAGCTCTTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNFIRIF*PQLFIL Trigger: GAGGATGAAGAGCTGTGGCAAGAAGATCCGTATGAA...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAATTGGCTTGTGCCTGGTaGGAGATCAGCGACTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CNLEANLGCIQRQTLSHKLACAW*EISDCS Trigger: ACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAA...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTTGGCTTGTGCCTGGTaGGAGATCAGCGACTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLLACAW*EISDCS Trigger: ACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGGTGACGGGTCCTGGGTaGTGTGGCAGCTGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QAGEISDCEKQMVKLDLLVTGPG*CGSWTC Trigger: GCAAGTCCAGCTGCCACACAACCCAGGACCCGTCAC...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGCAGCCAAGTGCTGGGTaGTGTCGACAGCGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAGEISDCEKQMVKLDLLQPSAG*CRQRWR Trigger: CCTCCATCGCTGTCGACACAACCCAGCACTTGGCTG...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 90 bp | TGGATGACATTGGTAACATCGTCATTCTCCGTCTCTCTGACGATATaGAGCAGCTCCTGCATGATGAATCTCACGTACGGTTTCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WMTLVTSSFSVSLTI*SSSCMMNLTYGFMC Trigger: GCACATGAAACCGTACGTGAGATTCATCATGCAGGAGCTGCTGCATATCGTCAGAGAGACGGAGAATGACGATGTTACCAATGTCATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACGTATGGCAGGTTAAATaGTATGCCAGGGAAAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNVWQVK*YARERI Trigger: AATCCTTTCCCTGGCATACAATTTAACCTGCCATAC...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACCTAAATGCTTTGGATTaGACAGCAGAGCGTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNLNALD*TAERWY Trigger: ATACCAACGCTCTGCTGTCAAATCCAAAGCATTTAG...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGGTGACGGGTCCTGGGTaGTGTGGCAGCTGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKVTGPG*CGSWTC Trigger: GCAAGTCCAGCTGCCACACAACCCAGGACCCGTCAC...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTTCACGGTTTACCGTTaGTCGTGTAGCACAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLFTVYR*SCSTDL Trigger: CAGGTCTGTGCTACACGACAAACGGTAAACCGTGAA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | TGCAATCTTGAGGCCAACCTGGGTTGCATACAGAGACAGACTCTATCTCACAAAAGATCTCCATCCACGTaGTCATGGTCTGGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CNLEANLGCIQRQTLSHKRSPST*SWSGDS Trigger: TGAATCACCAGACCATGACAACGTGGATGGAGATCT...TTTGTGAGATAGAGTCTGTCTCTGTATGCAACCCAGGTTGGCCTCAAGATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGCAGCCAAGTGCTGGGTaGTGTCGACAGCGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKQPSAG*CRQRWR Trigger: CCTCCATCGCTGTCGACACAACCCAGCACTTGGCTG...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GTGAACGGTGGATGCGCCTTCCAGTTGTTGCTGGGCACGACTCCAAAATTAAACAGCTCAATTTGGTCCTaGAATAAACTCTTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VNGGCAFQLLLGTTPKLNSSIWS*NKLFFN Trigger: GTTGAAGAAGAGTTTATTCAAGGACCAAATTGAGCT...GTTTAATTTTGGAGTCGTGCCCAGCAACAACTGGAAGGCGCATCCACCGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS GCA 90 bp | TGCATTTCTGAGGTTGAGCTCATTGTGAAACTTCAAAGAACTAAATaGATGCAGCACCCAGCAGGATCTAGCTCGAAGATATCCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CISEVELIVKLQRTK*MQHPAGSSSKISQV Trigger: AACCTGGGATATCTTCGAGCTAGATCCTGCTGGGTGCTGCATGCATTTAGTTCTTTGAAGTTTCACAATGAGCTCAACCTCAGAAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAGTGTGGCAGCTGGACTaGCTCCAGTGTATGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AITKTNKLNQAGEISDCEVWQLD*LQCMEQ Trigger: CTGTTCCATACACTGGAGCAAGTCCAGCTGCCACAC...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGTATTCATCCACACTGTaGTCCAGGTCCAGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLYSSTL*SRSSGV Trigger: CACCCCACTGGACCTGGACAACAGTGTGGATGAATA...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGAGAACGCCATCATTTTaGGCAACACCTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLRTPSF*ATPLFF Trigger: AAAGAAAAGAGGTGTTGCCAAAAATGATGGCGTTCT...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | TTCATAAGACCTTCAGTCTTTCTGCTAAGCCTAGTGACCAACAAGTCCCTGCTGTCAATCAGGCTCTTCTaGGCTAATTCTACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPSVFLLSLVTNKSLLSIRLF*ANSTAF Trigger: AAATGCAGTAGAATTAGCCAAGAAGAGCCTGATTGA...CAGCAGGGACTTGTTGGTCACTAGGCTTAGCAGAAAGACTGAAGGTCTTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS TCA 90 bp | CTCTTCTTGGCTAATTCTACTGCATTTCTGAGGTTGAGCTCATTGTaGAACTTCAAAGAACTAAATGCATGCAGCACCCAGCAGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLANSTAFLRLSSL*NFKELNACSTQQDL Trigger: TAGATCCTGCTGGGTGCTGCATGCATTTAGTTCTTTGAAGTTTCACAATGAGCTCAACCTCAGAAATGCAGTAGAATTAGCCAAGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGAGCTTCTGGATGACATaGGTAACATCGTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGEISDCEKQMVKLDLLSFWMT*VTSSFS Trigger: GGAGAATGACGATGTTACCAATGTCATCCAGAAGCT...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTATTCATCCACACTGTaGTCCAGGTCCAGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHYSSTL*SRSSGV Trigger: CACCCCACTGGACCTGGACAACAGTGTGGATGAATA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATCCTGTCTGGCCAGTATaGTGTCACCATGTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHPVWPV*CHHVLQ Trigger: CTGAAGAACATGGTGACACAATACTGGCCAGACAGG...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGCTGCAGGATTaGCTGTTGAATTCTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AITKTNKLNQAGEISDCEKQLQD*LLNSRQ Trigger: CTGCCTAGAATTCAACAGCAAATCCTGCAGCTGCTT...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGAGAGATTTCAGACTGTGAAAAGCAGATGGTTAAATTAGATCTGTTGAGACTTCTAAATGCTTaGGATTTGACAGCAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QAGEISDCEKQMVKLDLLRLLNA*DLTAER Trigger: ACGCTCTGCTGTCAAATCCAAAGCATTTAGAAGTCT...CAACAGATCTAATTTAACCATCTGCTTTTCACAGTCTGAAATCTCTCCAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATTTCACGGTTTACCGTTaGTCGTGTAGCACAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHFTVYR*SCSTDL Trigger: CAGGTCTGTGCTACACGACAAACGGTAAACCGTGAA...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS TCA 90 bp | ATGATTCGTAGGCAGATGTTCTCCAACTGCTGTATAATCTCTGGATaGTCTTCCACAACTGTTAAGATAGTGTCGATGGTGTGTAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: MIRRQMFSNCCIISG*SSTTVKIVSMVCKI Trigger: GATTTTACACACCATCGACACTATCTTAACAGTTGTGGAAGATCATCCAGAGATTATACAGCAGTTGGAGAACATCTGCCTACGAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTAGACTTCTAAATGCTTaGGATTTGACAGCAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RAITKTNKLNQAGEISDCRLLNA*DLTAER Trigger: ACGCTCTGCTGTCAAATCCAAAGCATTTAGAAGTCT...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CAA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTCTGCAGGATTTGCTGTaGAATTCTAGGCAGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: RAITKTNKLNQAGEISDCLQDLL*NSRQKY Trigger: ATATTTCTGCCTAGAATTCAACAGCAAATCCTGCAG...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATAGCTTCTGGATGACATaGGTAACATCGTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHSFWMT*VTSSFS Trigger: GGAGAATGACGATGTTACCAATGTCATCCAGAAGCT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CAA 90 bp | CCTGTAGTATCATTTAAGCACATGATTCATAAGACCTTCAGTCTTTCTGCTAAGCTAAATGCTTTGGATTaGACAGCAGAGCGTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PVVSFKHMIHKTFSLSAKLNALD*TAERWY Trigger: ATACCAACGCTCTGCTGTCAAATCCAAAGCATTTAG...CTTAGCAGAAAGACTGAAGGTCTTATGAATCATGTGCTTAAATGATACTACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CAA 90 bp | CGAGCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTCGACTTTCTCTGCTTTaGAGTGATTTTCACGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RAITKTNKLNQAGEISDCRLSLL*SDFHGL Trigger: TAAACCGTGAAAATCACTCAAAAGCAGAGAAAGTCG...ACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGCTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS-3UTR CAA 90 bp | CCAGATCACATTCCGGTTAGCACTTCTGGTAATAAAAATCATACAATGACTCTGATGGCCATGACAGTTTaGTCTTCAATTTCTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: PDHIPVSTSGNKNHTMTLMAMTV*SSISSY Trigger: GTATGAAGAAATTGAAGACAAAACTGTCATGGCCAT...CAGAGTCATTGTATGATTTTTATTACCAGAAGTGCTAACCGGAATGTGATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATGTATGGCAGGTTAAATaGTATGCCAGGGAAAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHVWQVK*YARERI Trigger: AATCCTTTCCCTGGCATACAATTTAACCTGCCATAC...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCAATAACAAAGACTAATAAGCTAAATCAGGCTGGAGAGATTTCAGACTGTGAACGACTTTCTCTGCTTTaGAGTGATTTTCACGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AITKTNKLNQAGEISDCERLSLL*SDFHGL Trigger: TAAACCGTGAAAATCACTCAAAAGCAGAGAAAGTCG...TTCACAGTCTGAAATCTCTCCAGCCTGATTTAGCTTATTAGTCTTTGTTATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGAAATTTAAGCTGCAGGTATTTCACACAAACAAAATCTGTATCACATATGGCCATGACAGTTTaGTCTTCAATTTCTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ADGNLSCRYFTQTKSVSHMAMTV*SSISSY Trigger: GTATGAAGAAATTGAAGACAAAACTGTCATGGCCAT...ATGTGATACAGATTTTGTTTGTGTGAAATACCTGCAGCTTAAATTTCCATCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS TCA 72 bp | ATTCATCCACACTGTTGTCCAGGTCCAGTGGGGTGCTaGAGCCCTCGAGGGCTGTCTCCTCCAGCACTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IHPHCCPGPVGC*SPRGLSPPALL Trigger: AAGAAGTGCTGGAGGAGACAGCCCTCGAGGGCTTCAGCACCCCACTGGACCTGGACAACAGTGTGGATGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CCA 72 bp | CGTACGGTTTCATGTGCTCCTTGGCTTGTGCCTGGTTaGAGATCAGCGACTGCAGTGCAAGGGCAGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTVSCAPWLVPG*RSATAVQGQLP Trigger: TGGAAGCTGCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CCA 72 bp | AAACTGGTATTCATCCACACTGTTGTCCAGGTCCAGTaGGGTGCTGAAGCCCTCGAGGGCTGTCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KLVFIHTVVQVQ*GAEALEGCLLQ Trigger: CTGGAGGAGACAGCCCTCGAGGGCTTCAGCACCCCACTGGACCTGGACAACAGTGTGGATGAATACCAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CAA 72 bp | ACGTACGGTTTCATGTGCTCCTTGGCTTGTGCCTGGTaGGAGATCAGCGACTGCAGTGCAAGGGCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TYGFMCSLACAW*EISDCSARAAS Trigger: GGAAGCTGCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 72 bp | GAATCTCACGTACGGTTTCATGTGCTCCTTGGCTTGTaGCTGGTTGGAGATCAGCGACTGCAGTGCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESHVRFHVLLGL*LVGDQRLQCKG Trigger: GCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 72 bp | TGTGCAGCCACAGCATCCACGGCAGGAGGTCGGTTCTaGAGCTCCAAGAGCACACTCAGTCCTATTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: CAATASTAGGRF*SSKSTLSPIIH Trigger: GTGTATAATAGGACTGAGTGTGCTCTTGGAGCTGCAGAACCGACCTCCTGCCGTGGATGCTGTGGCTGCACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CCA 72 bp | CTGGTTAAGCTCCGTCTCAGCTGCAATTCTCAGCTTTaGGTCGATAGTGCCCTTCAGCGCCTGGATGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVKLRLSCNSQL*VDSALQRLDDP Trigger: CGGATCATCCAGGCGCTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048418.14 ENSMUST00000145960.2 ENSMUST00000204936.2 |
||
| CDS CAA 90 bp | CTCCTGCATGATGAATCTCACGTACGGTTTCATGTGCTCCTTGGCTaGTGCCTGGTTGGAGATCAGCGACTGCAGTGCAAGGGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHDESHVRFHVLLG*CLVGDQRLQCKGSF Trigger: GAAGCTGCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTCATCATGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CAA 90 bp | TATGAACTGCGACGTGACGGGTCCTGGGTTGTGTGGCAGCTGGACTaGCTCCAGTGTATGGAACAGCAGTTCAGGGCTGTAGTAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: YELRRDGSWVVWQLD*LQCMEQQFRAVVKS Trigger: GCTCTTTACTACAGCCCTGAACTGCTGTTCCATACACTGGAGCAAGTCCAGCTGCCACACAACCCAGGACCCGTCACGTCGCAGTTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CCA 72 bp | CTGGCCAGTATTGTGTCACCATGTTCTTCAGGTAGATaGCAGCTGCCTGACGCACAGGGAACTCCACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LASIVSPCSSGR*QLPDAQGTPHG Trigger: ACCATGTGGAGTTCCCTGTGCGTCAGGCAGCTGCCATCTACCTGAAGAACATGGTGACACAATACTGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000145960.2 |
||
| CDS CAA 90 bp | ATGAATCTCACGTACGGTTTCATGTGCTCCTTGGCTTGTGCCTGGTaGGAGATCAGCGACTGCAGTGCAAGGGCAGCTTCCACCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: MNLTYGFMCSLACAW*EISDCSARAASTLT Trigger: TGTCAAGGTGGAAGCTGCCCTTGCACTGCAGTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS GCA 72 bp | AGCTCCTGCATGATGAATCTCACGTACGGTTTCATGTaGTCCTTGGCTTGTGCCTGGTTGGAGATCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCMMNLTYGFM*SLACAWLEISD Trigger: GTCGCTGATCTCCAACCAGGCACAAGCCAAGGAGCACATGAAACCGTACGTGAGATTCATCATGCAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CCA 72 bp | ATGCCCAGGAGCTGCCACATCTGCGGGGAGATGGTATaGCAGGTTAAATTGTATGCCAGGGAAAGGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MPRSCHICGEMV*QVKLYARERIS Trigger: GGAAATCCTTTCCCTGGCATACAATTTAACCTGCCATACCATCTCCCCGCAGATGTGGCAGCTCCTGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS CAA 90 bp | TCATTCATCCACTGGTTTATGAACTGCGACGTGACGGGTCCTGGGTaGTGTGGCAGCTGGACTTGCTCCAGTGTATGGAACAGCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFIHWFMNCDVTGPG*CGSWTCSSVWNSSS Trigger: TGAACTGCTGTTCCATACACTGGAGCAAGTCCAGCTGCCACACAACCCAGGACCCGTCACGTCGCAGTTCATAAACCAGTGGATGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
||
| CDS TCA 72 bp | CCACCTGGAGACACATTGTGCGCAGCTCACTGGTCTTaGCCCCACGTGTTAATCTCTCCAAGACAAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PPGDTLCAAHWS*PHVLISPRQVE Trigger: TTCAACTTGTCTTGGAGAGATTAACACGTGGGGTCAAGACCAGTGAGCTGCGCACAATGTGTCTCCAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS GCA 72 bp | ATGATCCGAAGCAAGCTGGTTAAGCTCCGTCTCAGCTaGAATTCTCAGCTTTGGGTCGATAGTGCCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: MIRSKLVKLRLS*NSQLWVDSALQ Trigger: CTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAGCTTGCTTCGGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204936.2 |
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| CDS CAA 72 bp | GAAGAACTTTACCAAATATCTCAGCCAAGTGCTGGGTaGTGTCGACAGCGATGGAGGCCACGTCCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: EELYQISQPSAG*CRQRWRPRPDC Trigger: ACAGTCAGGACGTGGCCTCCATCGCTGTCGACACAACCCAGCACTTGGCTGAGATATTTGGTAAAGTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS CCA 72 bp | ATAAAATGCCCAGGAGCTGCCACATCTGCGGGGAGATaGTATGGCAGGTTAAATTGTATGCCAGGGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IKCPGAATSAGR*YGRLNCMPGKG Trigger: TCCTTTCCCTGGCATACAATTTAACCTGCCATACCATCTCCCCGCAGATGTGGCAGCTCCTGGGCATTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS TCA 72 bp | TCCTCCTCACTTCTGCCAATTTGTGACTGCATAGCTTaGGCACTCACACTTGTCTCTTCCTCCTCCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SSSLLPICDCIA*ALTLVSSSSSL Trigger: AAGTGAGGAGGAGGAAGAGACAAGTGTGAGTGCTCAAGCTATGCAGTCACAAATTGGCAGAAGTGAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS GCA 72 bp | AATAATCTTGTAGGACTGGTTAAGCTCCGTCTCAGCTaGAATTCTCAGCTTTGGGTCGATAGTGCCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NNLVGLVKLRLS*NSQLWVDSALQ Trigger: CTGAAGGGCACTATCGACCCAAAGCTGAGAATTGCAGCTGAGACGGAGCTTAACCAGTCCTACAAGATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000145960.2 |
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| CDS TCA 72 bp | GTCTTGACCCCACGTGTTAATCTCTCCAAGACAAGTTaGATGAATAGCGGGATACACTGGTCAATTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: VLTPRVNLSKTS*MNSGIHWSIPL Trigger: AAGGGGAATTGACCAGTGTATCCCGCTATTCATTCAACTTGTCTTGGAGAGATTAACACGTGGGGTCAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS CAA 72 bp | TTGACAGGCATCTCCTCGTCTTCAATCAGGCTCTTCTaGGCTAATTCTACTGCATTTCTGAGGTTGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTGISSSSIRLF*ANSTAFLRLSS Trigger: TGAGCTCAACCTCAGAAATGCAGTAGAATTAGCCAAGAAGAGCCTGATTGAAGACGAGGAGATGCCTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS GCA 72 bp | GAGGTTGAGCTCATTGTGAAACTTCAAAGAACTAAATaGATGCAGCACCCAGCAGGATCTAGCTCGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: EVELIVKLQRTK*MQHPAGSSSKI Trigger: TATCTTCGAGCTAGATCCTGCTGGGTGCTGCATGCATTTAGTTCTTTGAAGTTTCACAATGAGCTCAACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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| CDS TCA 72 bp | AGGCAGATGTTCTCCAACTGCTGTATAATCTCTGGATaGTCTTCCACAACTGTTAAGATAGTGTCGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: RQMFSNCCIISG*SSTTVKIVSMV Trigger: CACCATCGACACTATCTTAACAGTTGTGGAAGATCATCCAGAGATTATACAGCAGTTGGAGAACATCTGCCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048418.14 ENSMUST00000239062.2 |
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| CDS TCA 72 bp | GCTAATTCTACTGCATTTCTGAGGTTGAGCTCATTGTaGAACTTCAAAGAACTAAATGCATGCAGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: ANSTAFLRLSSL*NFKELNACSTQ Trigger: CTGGGTGCTGCATGCATTTAGTTCTTTGAAGTTTCACAATGAGCTCAACCTCAGAAATGCAGTAGAATTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048418.14 |
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