Pregenerated sensors for IPO7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066232Ensembl transcript IDs: ENSMUST00000084731.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGTCAGCTCCCACCTCCTaGGGTTTCTGTCCTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRSAPTS*GFCPSI Trigger: AATAGAAGGACAGAAACCCCAGGAGGTGGGAGCTGA...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| 3UTR-3UTR CAA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATATCCAAATGTCCACTaGTACACTGAGAGCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRYPNVH*YTESFR Trigger: CCTAAAGCTCTCAGTGTACAAGTGGACATTTGGATA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAGGCCTCGCGCAGGGCTaGGTCCATGGTGCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRGLAQG*VHGAPE Trigger: CTCCGGGGCACCATGGACCCAGCCCTGCGCGAGGCC...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGCGATGTCCCCTGGTGTaGCTTCCCGATCAGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRRCPLV*LPDQAN Trigger: ATTGGCCTGATCGGGAAGCCACACCAGGGGACATCG...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAACTGGCAGAAAGTGCTaGATGGCTGCCACTAACGGA | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRTGRKC*MAATNG Trigger: TCCGTTAGTGGCAGCCATGCAGCACTTTCTGCCAGT...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAGCAGAAAGTGCTGCATaGCTGCCACTAACGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRAESAA*LPLTDF Trigger: GAAGTCCGTTAGTGGCAGCCATGCAGCACTTTCTGC...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAGCGATCCTTCAGAACTaGCAGAAAGTGCTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRAILQN*QKVLHG Trigger: GCCATGCAGCACTTTCTGCCAGTTCTGAAGGATCGC...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGCACATCTTCCTGTCATaGAGCCCCAGAAAACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRHIFLS*SPRKQS Trigger: TGACTGTTTTCTGGGGCTTCATGACAGGAAGATGTG...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGATTCAGAGACTTGTGTaGTTCATTGAGCTGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRIQRLV*FIELAL Trigger: GAGCGCCAGCTCAATGAAGCACACAAGTCTCTGAAT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAAGAACTGGCAGAAAGTaGTGCATGGCTGCCACTAAC | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRRTGRK*CMAATN Trigger: GTTAGTGGCAGCCATGCAGCACTTTCTGCCAGTTCT...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAGCTGCAATTGCAACCTaGAGGCACATTGTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRAAIAT*RHIVLS Trigger: ACTCAGAACAATGTGCCTGCAGGTTGCAATTGCAGC...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAACCTAGCTCACTGCTaGAGAGAGGAAATACATGAT | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRNLAHC*REEIHD Trigger: ATCATGTATTTCCTCTCTTCAGCAGTGAGCTAGGTT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGTGGGTTATCTCTTTGTaGTCTTCAACCACACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRWVISL*SSTTLR Trigger: TCTGAGTGTGGTTGAAGATCACAAAGAGATAACCCA...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATTCTGGAATAGTATATaGAGCGATGTCCCCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRFWNSI*SDVPWC Trigger: ACACCAGGGGACATCGCTCCATATACTATTCCAGAA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGATGCCGGTCTTCTTCTaGAATAGTATATGGAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRMPVFF*NSIWSD Trigger: ATCGCTCCATATACTATTCCAGAAGAAGACCGGCAT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATTGAATATCTGCTTTTaGATGAGGACAGACTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRLNICF*MRTDWS Trigger: CGACCAGTCTGTCCTCATTCAAAAGCAGATATTCAA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATCAGTTAGATTCTGTTaGTTTATCAGCTCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRSVRFC*FISSRG Trigger: ACCCCTGGAGCTGATAAACCAACAGAATCTAACTGA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATCATGTTTGATGATATaGTGGATGCACGTAGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRSCLMI*WMHVVS Trigger: GCTTACTACGTGCATCCATCATATCATCAAACATGA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGACTTTCAATAAAACTTaGTGGACACCAACAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRTFNKT*WTPTAK Trigger: CTTTGCTGTTGGTGTCCAGCAAGTTTTATTGAAAGT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAACATGTCAGACTATGTaGCAAAGAAAAGATCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRTCQTM*QRKDLL Trigger: GAGGAGATCTTTTCTTTGGCACATAGTCTGACATGT...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGACGGACTTCGCTCTTCTaGTTTCTTGTACTCATAATT | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRRTSLF*FLVLII Trigger: AATTATGAGTACAAGAAACCAGAAGAGCGAAGTCCG...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR TCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGAATCTGTCCTGAAACCTaGTTTAAAACCTGTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRICPET*FKTCGI Trigger: AATACCACAGGTTTTAAATCAGGTTTCAGGACAGAT...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATGGATTATAATACAATaGTGCAATTGCAACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRWIIIQ*CNCNLQ Trigger: CTGCAGGTTGCAATTGCAGCATTGTATTATAATCCA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGGACTTGTGTGCTTCATaGAGCTGGCGCTCAGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRDLCAS*SWRSAA Trigger: GGCCGCTGAGCGCCAGCTCAATGAAGCACACAAGTC...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGGACAGACTGGTCGGATaGGTCAGAAAGCAGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRDRLVG*VRKQLD Trigger: ATCCAGCTGCTTTCTGACCAATCCGACCAGTCTGTC...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGTCAATGCCCCGGCCTTaGCACTGCAGAATAATGACC | + |
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Preference number: 5 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRSMPRP*HCRIMT Trigger: GGTCATTATTCTGCAGTGCAAAGGCCGGGGCATTGA...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGACGAAATTCAGAGACTaGTGTGCTTCATTGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRTKFRD*CASLSW Trigger: CCAGCTCAATGAAGCACACAAGTCTCTGAATTTCGT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAATACAATGCTGCAATaGCAACCTGCAGGCACATTG | + |
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Preference number: 5 (lower is better) Translates to: VFRVRIRYHNQDRGGEMRNTMLQ*QPAGTL Trigger: CAATGTGCCTGCAGGTTGCAATTGCAGCATTGTATT...CCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATTCCGAGGATCAGCATaGGGTTCAGTAAGAATTTGG | + |
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Preference number: 5 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRFRGSA*GSVRIW Trigger: CCAAATTCTTACTGAACCCAATGCTGATCCTCGGAA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTTAGGATAAGATACCATAATCAAGACAGGGGAGGAGAAATGAGGAGATCGAGGCGCCATATATaGTTTTTCCTTGTACTGATA | + |
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Preference number: 5 (lower is better) Translates to: FRVRIRYHNQDRGGEMRRSRRHI*FFLVLI Trigger: TATCAGTACAAGGAAAAACAATATATGGCGCCTCGA...TCTCCTCATTTCTCCTCCCCTGTCTTGATTATGGTATCTTATCCTAACTCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084731.5 |
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