Pregenerated sensors for IPO5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030662Ensembl transcript IDs: ENSMUST00000032898.9
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCACACCGAGTCACTGCATGAGCCTTCTTGCAAAGAACCAGCGTaGCATCAAGTGACAGCCCTTTGCTTCTGGCTTGTCAGCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LHTESLHEPSCKEPA*HQVTALCFWLVSSW Trigger: CCAGCTGCTGACAAGCCAGAAGCAAAGGGCTGTCACTTGATGTCACGCTGGTTCTTTGCAAGAAGGCTCATGCAGTGACTCGGTGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR GCA 90 bp | AAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTaGGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: KNTLQCYHQAYRDLL*GFDEIHGSPPCTQG Trigger: ACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCAGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR TCA 90 bp | AGTCACTGCATGAGCCTTCTTGCAAAGAACCAGCGTGACATCAAGTaGCAGCCCTTTGCTTCTGGCTTGTCAGCAGCTGGTTGGCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SHCMSLLAKNQRDIK*QPFASGLSAAGWLL Trigger: AAGAAGCCAACCAGCTGCTGACAAGCCAGAAGCAAAGGGCTGTCACTTGATGTCACGCTGGTTCTTTGCAAGAAGGCTCATGCAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR GCA 90 bp | CTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTaGAGTGCTACCATCAGGCTTACAGGGACCTCCTCTGCGGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LFPFLWVRHSNRKIL*SATIRLTGTSSAGL Trigger: CAAACCCGCAGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR-3UTR GCA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGCATGGCAGTCCACCCTaGACACAGGGTTACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CAFQDRRHTSKAALQSVEHGSPP*TQGYFS Trigger: GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATG...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCAACACATCTATGTGGATaGACTGATCTGAAAGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: KESTTDSTEVLHRPLCISTHLCG*TDLKAA Trigger: CGCAGCTTTCAGATCAGTTCATCCACATAGATGTGT...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTTACACACAACACTACTaGTCTCTTGCTCAAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPYTQHY*SLAQKQ Trigger: TTGTTTTTGAGCAAGAGAGCAGTAGTGTTGTGTGTA...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGCCCTTTGCTTCTGGCTaGTCAGCAGCTGGTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: CAFQDRRHTSKAALQSVEPFASG*SAAGWL Trigger: AAGCCAACCAGCTGCTGACAAGCCAGAAGCAAAGGG...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR GCA 72 bp | TGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGTaGACGGCTCCAGAAGAACGGCCTACACACAACACT | + |
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Preference number: 3 (lower is better) Translates to: WQSTLHTGLLFL*TAPEERPTHNT Trigger: AGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR GCA 72 bp | CTGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTaGACTGCAGAGCGTGGAGGTAAAACACTGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LRFPRQETHFQG*TAERGGKTLSQ Trigger: CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR TCA 72 bp | ATGAGCCTTCTTGCAAAGAACCAGCGTGACATCAAGTaGCAGCCCTTTGCTTCTGGCTTGTCAGCAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: MSLLAKNQRDIK*QPFASGLSAAG Trigger: ACCAGCTGCTGACAAGCCAGAAGCAAAGGGCTGTCACTTGATGTCACGCTGGTTCTTTGCAAGAAGGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| 3UTR TCA 72 bp | GTCTGTGTAACACACATCTATGTGGATGAACTGATCTaGAAGCTGCGTTCCTTACGTTTCTGCAGGTCTATG | + |
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Preference number: 3 (lower is better) Translates to: VCVTHIYVDELI*KLRSLRFCRSM Trigger: CATAGACCTGCAGAAACGTAAGGAACGCAGCTTTCAGATCAGTTCATCCACATAGATGTGTGTTACACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGAATGAGGGCAGCCGCTaGATGGGCCTGCACCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMNEGSR*MGLHPL Trigger: CAGCGGGTGCAGGCCCATGCAGCGGCTGCCCTCATT...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGCATGGACTCTGCTGCTaGCACTCGGACCCCATCGTG | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMHGLCC*HSDPIV Trigger: CACGATGGGGTCCGAGTGGCAGCAGCAGAGTCCATG...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGGGCACCCGTCTCCCATaGCCTCAATGCACTTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMGTRLP*PQCTLQ Trigger: TTGCAAAGTGCATTGAGGTCATGGGAGACGGGTGCC...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCGCCGCTGCATGGGCCTaGACCCGCTGGTTGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSAAAWA*TRWLPW Trigger: CCAAGGCAACCAGCGGGTGCAGGCCCATGCAGCGGC...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGCCACATTGTCGGGGCTaGGCAGGTTTCCCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQPHCRG*AGFPGA Trigger: TGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGG...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGATGCCGCAGCTTGCCTaGCTTCTGGGCTGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CAFQDRRHTSKAALQSVEMPQLA*LLGCCH Trigger: GTGACAACAGCCCAGAAGTCAGGCAAGCTGCGGCAT...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGGCCATCAGTCCTGCATaGCTGTATTTCCAATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMAISPA*LYFQSG Trigger: CCCTGATTGGAAATACAGGCATGCAGGACTGATGGC...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGACCACGGGAAGGTACTaGTGGAATTCTTTCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMTTGRY*WNSFPR Trigger: CCTTGGGAAAGAATTCCAGCAGTACCTTCCCGTGGT...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCCTCCGAGAGGACATCTaGGTCGGGCTCTGTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LFLCTAPEERPTHNTTALLREDI*VGLCAD Trigger: ATCGGCACAGAGCCCGACTCAGATGTCCTCTCGGAG...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCGAGCTCCTGGATGGCTaGCTGCTGCTCCGGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCELLDG*LLLRTE Trigger: CTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCTC...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGGATCTTGGACCGGCCTaGGATATTCTCATAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMDLGPA*DILIGF Trigger: GAAACCTATGAGAATATCCCAGGCCGGTCCAAGATC...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGACTTCAAGGGCAAGCTaGCGCTGCATATTATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMTSRAS*RCILLR Trigger: CCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGT...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGGGCCTGCACCCGCTaGTTGCCTTGGTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSWACTR*LPWSSM Trigger: CATGGAAGACCAAGGCAACCAGCGGGTGCAGGCCCA...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCCCTGCACCCGCTGGTTaGCTTGGTCTTCCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSPAPAG*LGLPWS Trigger: AGACCATGGAAGACCAAGGCAACCAGCGGGTGCAGG...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGGCTTCGCCTTCAGGATaGCTCCCAGCTCCTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQASPSG*LPAPQS Trigger: ACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAGC...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGCCATATGCCGCAGCTTaGCTGACTTCTGGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQPYAAA*LTSGLL Trigger: CAACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGG...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGCTTGTAAGAGGAATGTaGTCTTGGACCGGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQLVRGM*SWTGLG Trigger: TCCCAGGCCGGTCCAAGATCACATTCCTCTTACAAG...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGATACCAAAACTTTGCTaGTCTCCGAGGTTCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: HIQGPGGSGTASTPSHCMIPKLC*SPRFTN Trigger: ATTTGTGAACCTCGGAGATCAGCAAAGTTTTGGTAT...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCCCTCTGGAGCCTGAATaGCTCTTACAAGCAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCPLEPE*LLQAAG Trigger: TCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAGG...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTTCAGGAGCTCCTGGATaGCTGCCTGCTGCTCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSSGAPG*LPAAPD Trigger: GTCCGGAGCAGCAGGCAGCCATCCAGGAGCTCCTGA...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGAGAGTTGCTTCTAAGTaGGGGCGCAAGTACTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQRVASK*GRKYFG Trigger: ACCAAAGTACTTGCGCCCTCACTTAGAAGCAACTCT...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGACATCTGAAGCATCCTaGATGAATTTCTCCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CAFQDRRHTSKAALQSVETSEAS*MNFSFP Trigger: CGGGAAGGAGAAATTCATGCAGGATGCTTCAGATGT...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCAAATCTGTAGCCATTTaGCCCACAGCATTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFLCTAPEERPTHNTTALKSVAI*PTALQA Trigger: AGCCTGCAATGCTGTGGGTCAAATGGCTACAGATTT...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | GGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGTGAGAATTCCTTCCATCTaGTGGTGGCATCCTTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLMRSMAVHPAHRVTFPVRIPSI*WWHPSP Trigger: TGGCGAAGGATGCCACCAGCAGATGGAAGGAATTCT...CACAGGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGGCGTTCTCGACAATGTaGTTCAGTGATGGCATAAAC | + |
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Preference number: 4 (lower is better) Translates to: ETHFQGCTAERGGKTLSQAFSTM*FSDGIN Trigger: GTTTATGCCATCACTGAAGCACATTGTCGAGAACGC...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCATATTCTCCATGTCCTaGGTGTCTAGAAGGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSIFSMS*VSRRAT Trigger: AGTGGCCCTTCTAGACACCCAGGACATGGAGAATAT...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGCAACTCCTGATTTTTaGAATGTTCTTCAAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: CAFQDRRHTSKAALQSVEATPDF*NVLQAS Trigger: CGAAGCTTGAAGAACATTTCAAAAATCAGGAGTTGC...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | GGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGTGGCGGACAAATCAGGTTaGCAATTAATGGGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GLMRSMAVHPAHRVTFPVADKSG*QLMGAA Trigger: AGCTGCTCCCATTAATTGTCAACCTGATTTGTCCGC...CACAGGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTGATCTTTCCCACTGCTaGGATGCAGTTCTCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPDLSHC*DAVLRG Trigger: GCCACGGAGAACTGCATCTCAGCAGTGGGAAAGATC...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTGCCTTGGTCTTCCATaGTCTGAAGCAAAGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCCLGLP*SEAKLQ Trigger: TTGCAGCTTTGCTTCAGACCATGGAAGACCAAGGCA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTTGTCTGTCTGGCCATaGTCTTTGCGGACAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCLSVWP*SLRTNQ Trigger: CTGATTTGTCCGCAAAGACCATGGCCAGACAGACAA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR TCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCCCAAGAACAATTGGGTaGTTACTTTCAATCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSPRTIG*LLSIRS Trigger: CGACCTGATTGAAAGTAATCACCCAATTGTTCTTGG...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCCTTTGGTACGGTGTCTaGAATCTCAACAAGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LFLCTAPEERPTHNTTALLWYGV*NLNKGF Trigger: AAATCCCTTGTTGAGATTGCAGACACCGTACCAAAG...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCACTCTCACCAGCAACTaGATTGCTATCGAAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFLCTAPEERPTHNTTALTLTSN*IAIEII Trigger: GATGATTTCGATAGCAATGCAGTTGCTGGTGAGAGT...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | GGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGTGAGTCTGCAAAGTGTTTaGACAGAGCGACATTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLMRSMAVHPAHRVTFPVSLQSV*TERHYA Trigger: AGCATAATGTCGCTCTGTTCAAACACTTTGCAGACT...CACAGGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTAACTTGGTGCCTTTCTaGATCAGCTCCTGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPNLVPF*ISSWSL Trigger: CAAGCTCCAGGAGCTGATTCAGAAAGGCACCAAGTT...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCACTTGCCGCAACTCCTaGTTTTTGAAATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSTCRNS*FLKCSS Trigger: TGAAGAACATTTCAAAAATCAGGAGTTGCGGCAAGT...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGTTTGACCCACAGCATTaGAGGCTGCATACCGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVFDPQH*RLHTGL Trigger: GAGTCCGGTATGCAGCCTGCAATGCTGTGGGTCAAA...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCGGTCTGAAGCAAAGCTaGAATCACCTTCTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCGLKQS*NHLLMK Trigger: TTTCATGAGAAGGTGATTGCAGCTTTGCTTCAGACC...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCCGATATCATCGAAGATaGACAATCCCCATTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCRYHRR*TIPIVC Trigger: ACAGACAATGGGGATTGTGCATCTTCGATGATATCG...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGCATCTATTAAATTCCTaGCCAATTCTGCAGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CAFQDRRHTSKAALQSVEHLLNS*PILQQY Trigger: ATATTGCTGCAGAATTGGCCAGGAATTTAATAGATG...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTATTCCTTCCATCTGCTaGTGGCATCCTTCGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSIPSIC*WHPSPM Trigger: CATTGGCGAAGGATGCCACCAGCAGATGGAAGGAAT...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGTCCCCATTGTCTGTCTaGCCATGGTCTTTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVSPLSV*PWSLRT Trigger: TGTCCGCAAAGACCATGGCCAGACAGACAATGGGGA...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTCCAGAAGTCTGTACTTaGCGAACTACATTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSPEVCT*RTTLAR Trigger: CCTGGCCAATGTAGTTCGCCAAGTACAGACTTCTGG...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTCATCCTGGCCCATGCTaGGATCATGTAAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSHPGPC*DHVRNL Trigger: CAGATTTCTTACATGATCTCAGCATGGGCCAGGATG...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTAGGGCAAGCTGGCGCTaGATATTATTGAGGTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSRASWR*ILLRLV Trigger: CACTAACCTCAATAATATGCAGCGCCAGCTTGCCCT...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGCAGCGGTTGTGTTTCTaGTGGCTTGTAAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVQRLCF*WLVRGM Trigger: CATTCCTCTTACAAGCCATCAGAAACACAACCGCTG...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGAAGTTCCAAAATATGTaGAGGGCAGCTTCCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVKFQNM*RAASRS Trigger: ACTCCGGGAAGCTGCCCTTCACATATTTTGGAACTT...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGCTCTTGATGGCAGTCTaGACATCTGATGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVLLMAV*TSDGRA Trigger: AGCTCTTCCATCAGATGTCCAGACTGCCATCAAGAG...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTACGGGAAGGTACTGCTaGAATTCTTTCCCAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSTGRYC*NSFPRI Trigger: AATCCTTGGGAAAGAATTCCAGCAGTACCTTCCCGT...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCCACATACTGGAGCATTaGACTTATGAAATATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCHILEH*TYEIFC Trigger: GCAGAATATTTCATAAGTCCAATGCTCCAGTATGTG...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGTTAGCAATTCACTCTTaGTGGCAGTCTGGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVLAIHS*WQSGHL Trigger: CAGATGTCCAGACTGCCATCAAGAGTGAATTGCTAA...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCATGGTCTTCCATGGTCTaGAGCAAAGCTGCAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISWSSMV*SKAAIT Trigger: GGTGATTGCAGCTTTGCTTCAGACCATGGAAGACCA...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTATAATGGAGTGCAGGTaGTTCACCAAGTTATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSIMECR*FTKLSK Trigger: CTTGGATAACTTGGTGAAGCACCTGCACTCCATTAT...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCACAGCTCCTTCTGGACTaGGTTCTCGACAATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISQLLLD*VLDNVL Trigger: AAGCACATTGTCGAGAACGCAGTCCAGAAGGAGCTG...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCAAAACCTTCAGGCCACTaGTTGTTGCCGTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISKPSGH*LLPSSS Trigger: AGATGAGGACGGCAACAACCAGTGGCCTGAAGGTTT...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGTTTGGTCTTAGCCTCTaGAGCCTGAATGACTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVFGLSL*SLNDSY Trigger: GTAAGAGTCATTCAGGCTCCAGAGGCTAAGACCAAA...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| 3UTR CAA 72 bp | CCAGACTCTCACTCCATTTACAGAATAAACACTAGGTaGTCCCCCAGTCTGTGTAACACACATCTATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDSHSIYRINTR*SPSLCNTHLCG Trigger: TCCACATAGATGTGTGTTACACAGACTGGGGGACAACCTAGTGTTTATTCTGTAAATGGAGTGAGAGTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTTTCTGCATACTTAAATaGAGCTGGACTACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPFCILK*SWTTVF Trigger: GAACACTGTAGTCCAGCTTCATTTAAGTATGCAGAA...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCATCCAGGCAGCAAGTCTaGAAAGTGTTTGAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISSRQQV*KVFEQS Trigger: GCTCTGTTCAAACACTTTGCAGACTTGCTGCCTGGA...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGGCGATGAGACTGGTATaGTTTCTTAACATAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVAMRLV*FLNIAA Trigger: AGCTGCTATGTTAAGAAAGCATACCAGTCTCATCGC...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTCACCAGCAACTGCATTaGTATCGAAATCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNRKILCSATIRLTGTSSHQQLH*YRNHHL Trigger: AAGATGATGATTTCGATAGCAATGCAGTTGCTGGTG...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGCCAAAACTAACTTGGTaGCTTTCTGAATCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVPKLTW*LSESAP Trigger: AGGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGG...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGGACCTCAATGCACTTTaGAAAGGAATGCATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVDLNAL*KGMHDL Trigger: GAGATCATGCATTCCTTTGCAAAGTGCATTGAGGTC...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGGTTCCAAAACTAACTTaGTGCCTTTCTGAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVVPKLT*CLSESA Trigger: AGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAAC...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGGTGTTTCCATCTGAATaGTCATTAGCAATTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVVFPSE*SLAIHS Trigger: AGAGTGAATTGCTAATGATCATTCAGATGGAAACAC...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCATGGGCCAAGAACAATTaGGTGATTACTTTCAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISWAKNN*VITFNQ Trigger: CTGATTGAAAGTAATCACCCAATTGTTCTTGGCCCA...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCATTCCAATCAGGGTTTTaGAGCATTTGCATAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISFQSGF*SICIMC Trigger: ACACATTATGCAAATGCTTCAAAACCCTGATTGGAA...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCAAGATTTTCTTCCTCATaGTGGATTGTGTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISRFSSS*WIVFPS Trigger: AGATGGAAACACAATCCAGCATGAGGAAGAAAATCT...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCAATATTTTCGGTAGATTaGTATTGTTTGGGCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KESTTDSTEVLHRPLCISIFSVD*YCLGQE Trigger: TTCTTGGCCCAAACAATACCAATCTACCGAAAATAT...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGGAGCAGGTAGAACTGTaGCTGCTCCGCCGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HIQGPGGSGTASTPSHCMEQVEL*LLRRGR Trigger: GCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTC...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGCCTGCACCCGCTGGTaGCCTTGGTCTTCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CAFQDRRHTSKAALQSVEACTRW*PWSSMV Trigger: GACCATGGAAGACCAAGGCAACCAGCGGGTGCAGGC...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 90 bp | CAGCGACTTGGGACAATCTTCAGTGAAGTTAATGAGGGCAGCCGCTaGATGGGCCTGCACCCGCTGGTTGCCTTGGTCTTCCATGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLGTIFSEVNEGSR*MGLHPLVALVFHGL Trigger: CAGACCATGGAAGACCAAGGCAACCAGCGGGTGCAGGCCCATGCAGCGGCTGCCCTCATTAACTTCACTGAAGATTGTCCCAAGTCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGCACCCGCTGGTTGCCTaGGTCTTCCATGGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CAFQDRRHTSKAALQSVEHPLVA*VFHGLK Trigger: CTTCAGACCATGGAAGACCAAGGCAACCAGCGGGTG...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGCCATATGCCGCAGCTaGCCTGACTTCTGGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CAFQDRRHTSKAALQSVEAICRS*PDFWAV Trigger: AACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGGC...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 90 bp | TTGAGGCACCCGTCTCCCATGACCTCAATGCACTTTGCAAAGGAATaGATGATCTCCGAGAGGACATCTGAGTCGGGCTCTGTGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRHPSPMTSMHFAKE*MISERTSESGSVPM Trigger: CATCGGCACAGAGCCCGACTCAGATGTCCTCTCGGAGATCATGCATTCCTTTGCAAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 90 bp | GGTCTTAGCCTCTGGAGCCTGAATGACTCTTACAAGCAGCGGGAGTaGATCGGTACAGAAAGGGCGGTAGTTATCTCCACCAAACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLSLWSLNDSYKQRE*IGTERAVVISTKLR Trigger: GCGCAGTTTGGTGGAGATAACTACCGCCCTTTCTGTACCGATGCACTCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAGGCTAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCGAGAACAGCAGCCATTaGTCTAGCCTCCTCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCENSSH*SSLLGS Trigger: GCTGCCGAGGAGGCTAGACAAATGGCTGCTGTTCTC...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | CACATTCAAGGGCCGGGAGGGAGTGGGACAGCCTCCACACCGAGTCACTGCATGGTAGATTGGTATTGTTaGGGCCAAGAACAATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HIQGPGGSGTASTPSHCMVDWYC*GQEQLG Trigger: ACCCAATTGTTCTTGGCCCAAACAATACCAATCTAC...CATGCAGTGACTCGGTGTGGAGGCTGTCCCACTCCCTCCCGGCCCTTGAATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCACTTGGCGAACTACATaGGCCAGGCGTTTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSTWRTT*ARRLAQ Trigger: CTGTGCCAAACGCCTGGCCAATGTAGTTCGCCAAGT...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 90 bp | CTCAATGCACTTTGCAAAGGAATGCATGATCTCCGAGAGGACATCTaGGTCGGGCTCTGTGCCGATGGCCTTGATGAGAGCGTCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LNALCKGMHDLREDI*VGLCADGLDESVAH Trigger: ATGTGCGACGCTCTCATCAAGGCCATCGGCACAGAGCCCGACTCAGATGTCCTCTCGGAGATCATGCATTCCTTTGCAAAGTGCATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTGTTTCCGGACCACATaGTCGGGGCTGAGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCCFRTT*SGLSRF Trigger: AAACCTGCTCAGCCCCGACAATGTGGTCCGGAAACA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCGACTCAACTGCAGAGTaGCTTCTAAGTGAGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSDSTAE*LLSEGA Trigger: TGCGCCCTCACTTAGAAGCAACTCTGCAGTTGAGTC...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGAGCGGGACCATCAGTTaGACAACCTGTTCAGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: CAFQDRRHTSKAALQSVESGTIS*TTCSVY Trigger: ATACACTGAACAGGTTGTCAAACTGATGGTCCCGCT...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTCTTTCCCAAGGATTTaGCACATCCTGGCCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSSFPRI*HILAHA Trigger: AGCATGGGCCAGGATGTGCAAAATCCTTGGGAAAGA...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTCCAGAAGTCTGTACTaGGCGAACTACATTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSSRSLY*ANYIGQ Trigger: CTGGCCAATGTAGTTCGCCAAGTACAGACTTCTGGA...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 90 bp | TTCTCCGTGGCGTTGACATTTTCTTTGGTCTTAGCCTCTGGAGCCTaGATGACTCTTACAAGCAGCGGGAGTGCATCGGTACAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVALTFSLVLASGA*MTLTSSGSASVQKG Trigger: CCCTTTCTGTACCGATGCACTCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAGGCTAAGACCAAAGAAAATGTCAACGCCACGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCTCAGGCCACTGGTTGTaGCCGTCCTCATCTATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLCTAPEERPTHNTTALSGHWL*PSSSIK Trigger: TTTAATAGATGAGGACGGCAACAACCAGTGGCCTGA...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCTGCGGACAAATCAGGTaGACAATTAATGGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSCGQIR*TINGSS Trigger: GCTGCTCCCATTAATTGTCAACCTGATTTGTCCGCA...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCGCGTTGACATTTTCTTaGGTCTTAGCCTCTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCALTFS*VLASGA Trigger: GGCTCCAGAGGCTAAGACCAAAGAAAATGTCAACGC...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | GAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGGTAAAACACTGAGCCAGCTTCCTCATGCTGGATaGTGTTTCCATCTGAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETHFQGCTAERGGKTLSQLPHAG*CFHLND Trigger: ATCATTCAGATGGAAACACAATCCAGCATGAGGAAG...CTGGCTCAGTGTTTTACCTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTCTCCAGTTCTCCGTGGCGTaGACATTTTCTTTGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLCTAPEERPTHNTTALQFSVA*TFSLVL Trigger: TAAGACCAAAGAAAATGTCAACGCCACGGAGAACTG...GAGAGCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTTCACACAGTCGGGCTaGAACTTCATGATCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCFTQSG*NFMIFP Trigger: GGGAAAGATCATGAAGTTCAAGCCCGACTGTGTGAA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CCA 90 bp | GCAGCTGCAGTCTCTGACAGTGTCACAATCACTTCAAGGGCAAGCTaGCGCTGCATATTATTGAGGTTAGTGTCTCCACACAACTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAAVSDSVTITSRAS*RCILLRLVSPHNFR Trigger: TCTGAAGTTGTGTGGAGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTCAGAGACTGCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTCCTTCAGGCCACTGGTaGTTGCCGTCCTCATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SNRKILCSATIRLTGTSSPSGHW*LPSSSI Trigger: AATAGATGAGGACGGCAACAACCAGTGGCCTGAAGG...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | TGCGGGTTTGATGAGATCCATGGCAGTCCACCCTGCACACAGGGTTACTTTTCCGTCCAAATAGTGCTGTaGTTGGTTCCCAAAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CGFDEIHGSPPCTQGYFSVQIVL*LVPKNS Trigger: GGAATTTTTGGGAACCAACAACAGCACTATTTGGAC...GGAAAAGTAACCCTGTGTGCAGGGTGGACTGCCATGGATCTCATCAAACCCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTGAGGGCGCAAGTACTTaGGTACGGTGTCTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPEGAST*VRCLQS Trigger: AGATTGCAGACACCGTACCAAAGTACTTGCGCCCTC...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTCTGACTTCTGGGCTGTaGTCACACACATACTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNRKILCSATIRLTGTSSLTSGL*SHTYWS Trigger: GCTCCAGTATGTGTGTGACAACAGCCCAGAAGTCAG...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TGCGCTTTCCAAGACAGGAGACACACTTCCAAGGCTGCACTGCAGAGCGTGGAGAATATTTTCGGTAGATaGGTATTGTTTGGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAFQDRRHTSKAALQSVENIFGR*VLFGPR Trigger: TCTTGGCCCAAACAATACCAATCTACCGAAAATATT...CTCCACGCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGACATTGGCCAGGCGTTaGGCACAGGGGTCTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVTLARR*AQGSSC Trigger: ACATGAAGACCCCTGTGCCAAACGCCTGGCCAATGT...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 90 bp | CACATTCACACAGTCGGGCTTGAACTTCATGATCTTTCCCACTGCTaGGATGCAGTTCTCCGTGGCGTTGACATTTTCTTTGGTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIHTVGLELHDLSHC*DAVLRGVDIFFGLS Trigger: GCTAAGACCAAAGAAAATGTCAACGCCACGGAGAACTGCATCTCAGCAGTGGGAAAGATCATGAAGTTCAAGCCCGACTGTGTGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS GCA 90 bp | GCAGTCTCTGACAGTGTCACAATCACTTCAAGGGCAAGCTGGCGCTaGATATTATTGAGGTTAGTGTCTCCACACAACTTCAGACTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVSDSVTITSRASWR*ILLRLVSPHNFRLN Trigger: GTTGAGTCTGAAGTTGTGTGGAGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTCAGAGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 90 bp | AAAATATGTGAAGGGCAGCTTCCCGGAGTCCCATGTTTTGTGAGCTaGCTGAATCAAAGAGGAACTTCAAACCTTCAGGCCACTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KICEGQLPGVPCFVS*LNQRGTSNLQATGC Trigger: ACAACCAGTGGCCTGAAGGTTTGAAGTTCCTCTTTGATTCAGTCAGCTCACAAAACATGGGACTCCGGGAAGCTGCCCTTCACATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTTTCCCTTCTTGTGGGTCAGACACAGCAATAGAAAAATACTCTGCAGTGAAGAGGAATGTGATCTaGGACCGGCCTGGGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFPSCGSDTAIEKYSAVKRNVI*DRPGIF Trigger: GAATATCCCAGGCCGGTCCAAGATCACATTCCTCTT...CACTGCAGAGTATTTTTCTATTGCTGTGTCTGACCCACAAGAAGGGAAAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | AGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTCTGCGACATTATGCTCATaGGCAAGTATGAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNRKILCSATIRLTGTSSATLCS*ASMKAA Trigger: TGCTGCCTTCATACTTGCCAATGAGCATAATGTCGC...AGAGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTTTAATACCAAAACTTaGCTGATCTCCGAGGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCFNTKT*LISEVH Trigger: GTGAACCTCGGAGATCAGCAAAGTTTTGGTATTAAA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTTCGGTAGATTGGTATaGTTTGGGCCAAGAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCFGRLV*FGPRTI Trigger: AATTGTTCTTGGCCCAAACAATACCAATCTACCGAA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | GTTACTTTTCCTGTGCACGGCTCCAGAAGAACGGCCTACACACAACACTACTGCTTTCCAATCAGGGTTTaGAAGCATTTGCATAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTFPVHGSRRTAYTQHYCFPIRV*KHLHNV Trigger: CACATTATGCAAATGCTTCAAAACCCTGATTGGAAA...GCAGTAGTGTTGTGTGTAGGCCGTTCTTCTGGAGCCGTGCACAGGAAAAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTATTAGCAATTCACTCTaGATGGCAGTCTGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPISNSL*MAVWTS Trigger: AGATGTCCAGACTGCCATCAAGAGTGAATTGCTAAT...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTTCACCAGCAACTGCATaGCTATCGAAATCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPSPATA*LSKSSS Trigger: AGATGATGATTTCGATAGCAATGCAGTTGCTGGTGA...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCATGGCGCTGCATATTATaGAGGTTAGTGTCTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KESTTDSTEVLHRPLCISWRCIL*RLVSPH Trigger: GTGTGGAGACACTAACCTCAATAATATGCAGCGCCA...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCAAAAATCTGTAGCCATTaGACCCACAGCATTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KESTTDSTEVLHRPLCISKICSH*THSIAG Trigger: GCCTGCAATGCTGTGGGTCAAATGGCTACAGATTTT...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | ACAGCAATAGAAAAATACTCTGCAGTGCTACCATCAGGCTTACAGGGACCTCCTGTCATAGTCTTCATCTaGTCTTTTAACTTGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAIEKYSAVLPSGLQGPPVIVFI*SFNLPQ Trigger: TTGCGGCAAGTTAAAAGACAAGATGAAGACTATGAC...AGGAGGTCCCTGTAAGCCTGATGGTAGCACTGCAGAGTATTTTTCTATTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS-3UTR CAA 90 bp | AAGGAATCAACGACAGACAGTACTGAAGTTCTACACAGGCCTCTTTGTATTTCACAAATAGTGCTGTTGTaGGTTCCCAAAAATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KESTTDSTEVLHRPLCISQIVLL*VPKNSR Trigger: CCTGGAATTTTTGGGAACCAACAACAGCACTATTTG...TGAAATACAAAGAGGCCTGTGTAGAACTTCAGTACTGTCTGTCGTTGATTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 90 bp | CACATACTGGAGCATTGGACTTATGAAATATTCTGCATACTTAAATaGAGCTGGACTACAGTGTTCTACGATATCATCGAAGATGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HILEHWTYEIFCILK*SWTTVFYDIIEDAQ Trigger: TTGTGCATCTTCGATGATATCGTAGAACACTGTAGTCCAGCTTCATTTAAGTATGCAGAATATTTCATAAGTCCAATGCTCCAGTATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 72 bp | AACTGCGCCATGACGCCGAGGCCATATGCCGCAGCTTaGCTGACTTCTGGGCTGTTGTCACACACATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: NCAMTPRPYAAA*LTSGLLSHTYW Trigger: CCAGTATGTGTGTGACAACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGGCCTCGGCGTCATGGCGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | TCAGGAGCTCCTGGATGGCTGCCTGCTGCTCCGGACTaGGTTGAGCTATGCATTCAGTCCACAATCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAPGWLPAAPD*VELCIQSTILQ Trigger: CTGGAGGATTGTGGACTGAATGCATAGCTCAACTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCTCCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 72 bp | AGCTTCGCCTTCAGGATGCCTCCCAGCTCCTCAAAGTaGTCATTGTTGAGGCACCCGTCTCCCATGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFAFRMPPSSSK*SLLRHPSPMTS Trigger: TGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CCA 72 bp | CAATCTTCAGTGAAGTTAATGAGGGCAGCCGCTGCATaGGCCTGCACCCGCTGGTTGCCTTGGTCTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QSSVKLMRAAAA*ACTRWLPWSSM Trigger: CATGGAAGACCAAGGCAACCAGCGGGTGCAGGCCCATGCAGCGGCTGCCCTCATTAACTTCACTGAAGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CAA 72 bp | GCCTTCAGGATGCCTCCCAGCTCCTCAAAGTGCTCATaGTTGAGGCACCCGTCTCCCATGACCTCAATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AFRMPPSSSKCS*LRHPSPMTSMH Trigger: GTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CAA 72 bp | AAACTGCGCCATGACGCCGAGGCCATATGCCGCAGCTaGCCTGACTTCTGGGCTGTTGTCACACACATACTG | + |
|
Preference number: 6 (lower is better) Translates to: KLRHDAEAICRS*PDFWAVVTHIL Trigger: CAGTATGTGTGTGACAACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGGCCTCGGCGTCATGGCGCAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS TCA 72 bp | AGCTCCTGGATGGCTGCCTGCTGCTCCGGACTGAGTTaGGCTATGCATTCAGTCCACAATCCTCCAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSWMAACCSGLS*AMHSVHNPPEV Trigger: GACTTCTGGAGGATTGTGGACTGAATGCATAGCTCAACTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CAA 72 bp | GAGCTCCTGGATGGCTGCCTGCTGCTCCGGACTGAGTaGAGCTATGCATTCAGTCCACAATCCTCCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ELLDGCLLLRTE*SYAFSPQSSRS Trigger: ACTTCTGGAGGATTGTGGACTGAATGCATAGCTCAACTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 72 bp | CTCTGGAGCCTGAATGACTCTTACAAGCAGCGGGAGTaGATCGGTACAGAAAGGGCGGTAGTTATCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LWSLNDSYKQRE*IGTERAVVIST Trigger: GGTGGAGATAACTACCGCCCTTTCTGTACCGATGCACTCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CAA 90 bp | AGCTTCGCCTTCAGGATGCCTCCCAGCTCCTCAAAGTGCTCATTGTaGAGGCACCCGTCTCCCATGACCTCAATGCACTTTGCAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFAFRMPPSSSKCSL*RHPSPMTSMHFAKE Trigger: TTCCTTTGCAAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS CAA 90 bp | TCAAGCTTCGCCTTCAGGATGCCTCCCAGCTCCTCAAAGTGCTCATaGTTGAGGCACCCGTCTCCCATGACCTCAATGCACTTTGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSFAFRMPPSSSKCS*LRHPSPMTSMHFAK Trigger: CTTTGCAAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
||
| CDS GCA 72 bp | CCGTCTCCCATGACCTCAATGCACTTTGCAAAGGAATaGATGATCTCCGAGAGGACATCTGAGTCGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSPMTSMHFAKE*MISERTSESGS Trigger: AGAGCCCGACTCAGATGTCCTCTCGGAGATCATGCATTCCTTTGCAAAGTGCATTGAGGTCATGGGAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS CAA 72 bp | TTCAGGATGCCTCCCAGCTCCTCAAAGTGCTCATTGTaGAGGCACCCGTCTCCCATGACCTCAATGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: FRMPPSSSKCSL*RHPSPMTSMHF Trigger: AAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS CAA 90 bp | GACAGCCAGTGTGGTAAGACCTCCTCCACATTCACACAGTCGGGCTaGAACTTCATGATCTTTCCCACTGCTGAGATGCAGTTCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DSQCGKTSSTFTQSG*NFMIFPTAEMQFSV Trigger: CACGGAGAACTGCATCTCAGCAGTGGGAAAGATCATGAAGTTCAAGCCCGACTGTGTGAATGTGGAGGAGGTCTTACCACACTGGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | GAAGGGCAGCTTCCCGGAGTCCCATGTTTTGTGAGCTaGCTGAATCAAAGAGGAACTTCAAACCTTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EGQLPGVPCFVS*LNQRGTSNLQA Trigger: GGCCTGAAGGTTTGAAGTTCCTCTTTGATTCAGTCAGCTCACAAAACATGGGACTCCGGGAAGCTGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS GCA 72 bp | GTCTTCATCAGCGGCCCCATAACCACGGGAAGGTACTaGTGGAATTCTTTCCCAAGGATTTTGCACATCCTG | + |
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Preference number: 6 (lower is better) Translates to: VFISGPITTGRY*WNSFPRILHIL Trigger: CAGGATGTGCAAAATCCTTGGGAAAGAATTCCAGCAGTACCTTCCCGTGGTTATGGGGCCGCTGATGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | CACAACTTCAGACTCAACTGCAGAGTTGCTTCTAAGTaGGGGCGCAAGTACTTTGGTACGGTGTCTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: HNFRLNCRVASK*GRKYFGTVSAI Trigger: GATTGCAGACACCGTACCAAAGTACTTGCGCCCTCACTTAGAAGCAACTCTGCAGTTGAGTCTGAAGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS CCA 72 bp | GTCTCTGACAGTGTCACAATCACTTCAAGGGCAAGCTaGCGCTGCATATTATTGAGGTTAGTGTCTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: VSDSVTITSRAS*RCILLRLVSPH Trigger: GTGTGGAGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTCAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | TTCTTTCCCAAGGATTTTGCACATCCTGGCCCATGCTaGGATCATGTAAGAAATCTGGGGGTCGTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FFPKDFAHPGPC*DHVRNLGVVIF Trigger: GAAGATGACGACCCCCAGATTTCTTACATGATCTCAGCATGGGCCAGGATGTGCAAAATCCTTGGGAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | ACAGTCGGGCTTGAACTTCATGATCTTTCCCACTGCTaGGATGCAGTTCTCCGTGGCGTTGACATTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TVGLELHDLSHC*DAVLRGVDIFF Trigger: AAAGAAAATGTCAACGCCACGGAGAACTGCATCTCAGCAGTGGGAAAGATCATGAAGTTCAAGCCCGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS GCA 72 bp | GACAGTGTCACAATCACTTCAAGGGCAAGCTGGCGCTaGATATTATTGAGGTTAGTGTCTCCACACAACTTC | + |
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Preference number: 6 (lower is better) Translates to: DSVTITSRASWR*ILLRLVSPHNF Trigger: GAAGTTGTGTGGAGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS CCA 72 bp | TTTACAATCTCATTTAGAATTCCTTCCATCTGCTGGTaGCATCCTTCGCCAATGGCGGATAGGGCCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: FTISFRIPSICW*HPSPMADRAIS Trigger: ACTGATGGCCCTATCCGCCATTGGCGAAGGATGCCACCAGCAGATGGAAGGAATTCTAAATGAGATTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS CAA 72 bp | TCTGCAAAGTGTTTGAACAGAGCGACATTATGCTCATaGGCAAGTATGAAGGCAGCAGTAGCTCTGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SAKCLNRATLCS*ASMKAAVALAD Trigger: GTCTGCCAGAGCTACTGCTGCCTTCATACTTGCCAATGAGCATAATGTCGCTCTGTTCAAACACTTTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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| CDS TCA 72 bp | GTCACAACTTGTTCCAAAACTAACTTGGTGCCTTTCTaGATCAGCTCCTGGAGCTTGAGCACCATAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: VTTCSKTNLVPF*ISSWSLSTIME Trigger: CTCCATTATGGTGCTCAAGCTCCAGGAGCTGATTCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032898.9 |
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