Pregenerated sensors for IPMK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060733Ensembl transcript IDs: ENSMUST00000079252.13, ENSMUST00000118381.8, ENSMUST00000121446.2, ENSMUST00000141984.2, ENSMUST00000147277.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGTGCTGTTAGCTGCTGCCGGCCACCTGACACTCCCCTTCCCATaGTGCTCAGCACAGAGCAGACAGGACCGGGAGGGAGCCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: FVLLAAAGHLTLPFP*CSAQSRQDREGALL Trigger: CAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCTGAGCATCATGGGAAGGGGAGTGTCAGGTGGCCGGCAGCAGCTAACAGCACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | CAGAGGCCTGACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTaGATCACAGGACGCCGGCAGGCATTCAGGAATCGGTTCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: QRPDSEGNTVEISGN*ITGRRQAFRNRFSL Trigger: GAGTGAGAACCGATTCCTGAATGCCTGCCGGCGTCCTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTCAGGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | TCCCATGATGCTCAGCACAGAGCAGACAGGACCGGGAGGGAGCCCTaGTGGCTTAAGCACCTTTCTTTCATTCGCTGCGCTGCACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SHDAQHRADRTGREP*WLKHLSFIRCAALC Trigger: GCAGAGTGCAGCGCAGCGAATGAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCTGAGCATCATGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CCA 90 bp | CATGATGCTCAGCACAGAGCAGACAGGACCGGGAGGGAGCCCTGCTaGCTTAAGCACCTTTCTTTCATTCGCTGCGCTGCACTCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: HDAQHRADRTGREPC*LKHLSFIRCAALCL Trigger: AAGGCAGAGTGCAGCGCAGCGAATGAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCTGAGCATCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR TCA 90 bp | CAGATGAGCCTCTGGCATAGCCTGCAGTCCTCCATCCCACATGGATaGATCTTTGATCTTGAACTCCATGAAGTCAGACAGCTTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QMSLWHSLQSSIPHG*IFDLELHEVRQLAE Trigger: CTCTGCAAGCTGTCTGACTTCATGGAGTTCAAGATCAAAGATTCATCCATGTGGGATGGAGGACTGCAGGCTATGCCAGAGGCTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR TCA 90 bp | AGACCGGGAAACACCCACCACAGGTTGCTTACATCACGAACATGTTaGTCATGGCATCAAGGAGCACAAAGTAACACAAAGTGGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: RPGNTHHRLLTSRTC*SWHQGAQSNTKWPA Trigger: TGCTGGCCACTTTGTGTTACTTTGTGCTCCTTGATGCCATGATCAACATGTTCGTGATGTAAGCAACCTGTGGTGGGTGTTTCCCGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR TCA 90 bp | TGTTCCACTCTCTTCTGTTTATCCCATCAATCAACTACTTGCAGATaGGCCTCTGGCATAGCCTGCAGTCCTCCATCCCACATGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: CSTLFCLSHQSTTCR*ASGIACSPPSHMDE Trigger: TTCATCCATGTGGGATGGAGGACTGCAGGCTATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAGAAGAGAGTGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR GCA 90 bp | TTCAGGGTCTTTTCCTCTGGGAAAGCTGGTAGATTGATCACCGTCTaGCAAAGTAAGAAGGCGTGCCTGTGTTCCACTCTCTTCTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: FRVFSSGKAGRLITV*QSKKACLCSTLFCL Trigger: TAAACAGAAGAGAGTGGAACACAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACCAGCTTTCCCAGAGGAAAAGACCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR CCA 90 bp | CTGGCACGAATCATGGTGGTTTTTGATAGAAGCTATCGAAGCAAGTaGGAAGACACACTATCGACAGCCAAGAGGCTGAATCTGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LARIMVVFDRSYRSK*EDTLSTAKRLNLSP Trigger: TGGAGACAGATTCAGCCTCTTGGCTGTCGATAGTGTGTCTTCCCACTTGCTTCGATAGCTTCTATCAAAAACCACCATGATTCGTGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | GGGAAAGCTGGTAGATTGATCACCGTCTGCCAAAGTAAGAAGGCGTaGCTGTGTTCCACTCTCTTCTGTTTATCCCATCAATCAACTACT | + |
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Preference number: 1 (lower is better) Translates to: GKAGRLITVCQSKKA*LCSTLFCLSHQSTT Trigger: AGTAGTTGATTGATGGGATAAACAGAAGAGAGTGGAACACAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACCAGCTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR TCA 90 bp | ACCAAATGGACTATTCTTAAAAGGGACTTGATGTTTCTGGGTAACTaGACCATTGTAGGGGGCAAGACAAAGGGCAACGGAAGCTATGGA | + |
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Preference number: 1 (lower is better) Translates to: TKWTILKRDLMFLGN*TIVGGKTKGNGSYG Trigger: TCCATAGCTTCCGTTGCCCTTTGTCTTGCCCCCTACAATGGTTCAGTTACCCAGAAACATCAAGTCCCTTTTAAGAATAGTCCATTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR TCA 90 bp | GCTATCGAAGCAAGTGGGAAGACACACTATCGACAGCCAAGAGGCTaGATCTGTCTCCAGATATCAGTATTGGATGTTATAACAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: AIEASGKTHYRQPRG*ICLQISVLDVITTE Trigger: CTCTGTTGTTATAACATCCAATACTGATATCTGGAGACAGATTCAGCCTCTTGGCTGTCGATAGTGTGTCTTCCCACTTGCTTCGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | ATCATTTTTAAAGACAGGACAGACCGGGAAACACCCACCACAGGTTaGTTACATCACGAACATGTTGATCATGGCATCAAGGAGCACAAA | + |
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Preference number: 1 (lower is better) Translates to: IIFKDRTDRETPTTG*LHHEHVDHGIKEHK Trigger: TTTGTGCTCCTTGATGCCATGATCAACATGTTCGTGATGTAAGCAACCTGTGGTGGGTGTTTCCCGGTCTGTCCTGTCTTTAAAAATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CCA 90 bp | GTGTTCACATATGCATGGTTAGTGACAGATGCCTCTTCCCCAAAGTaGCAAATCTCAGCATCATTTTTAAAGACAGGACAGACCGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: VFTYAWLVTDASSPK*QISASFLKTGQTGK Trigger: TTTCCCGGTCTGTCCTGTCTTTAAAAATGATGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | CACCTCCTCATTTGCTCATTTCTTAAATATCCGTGTGTTCACATATaGATGGTTAGTGACAGATGCCTCTTCCCCAAAGTGGCAAATCTC | + |
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Preference number: 1 (lower is better) Translates to: HLLICSFLKYPCVHI*MVSDRCLFPKVANL Trigger: GAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACACACGGATATTTAAGAAATGAGCAAATGAGGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CCA 90 bp | TCCTCATTTGCTCATTTCTTAAATATCCGTGTGTTCACATATGCATaGTTAGTGACAGATGCCTCTTCCCCAAAGTGGCAAATCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SSFAHFLNIRVFTYA*LVTDASSPKWQISA Trigger: TGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACACACGGATATTTAAGAAATGAGCAAATGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR TCA 90 bp | TCAAACTGCCTCTTAAGAGCCAAAATAGTGTTCAGCAGATGGGCTTaGGAGTTCCTGAATCACACCCAGATAACAAGTCAATATTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SNCLLRAKIVFSRWA*EFLNHTQITSQYCK Trigger: CTTACAATATTGACTTGTTATCTGGGTGTGATTCAGGAACTCTCAAGCCCATCTGCTGAACACTATTTTGGCTCTTAAGAGGCAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR TCA 90 bp | TGTCTCCAGATATCAGTATTGGATGTTATAACAACAGAGTTGCTCTaGAGTCAAGAAATACCTTCATGTCCGCTGACAAGTCTGAAATCC | + |
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Preference number: 1 (lower is better) Translates to: CLQISVLDVITTELL*SQEIPSCPLTSLKS Trigger: GGATTTCAGACTTGTCAGCGGACATGAAGGTATTTCTTGACTTCAGAGCAACTCTGTTGTTATAACATCCAATACTGATATCTGGAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR GCA 90 bp | TTTCTTAAATATCCGTGTGTTCACATATGCATGGTTAGTGACAGATaGCTCTTCCCCAAAGTGGCAAATCTCAGCATCATTTTTAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: FLKYPCVHICMVSDR*LFPKVANLSIIFKD Trigger: GTCTTTAAAAATGATGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACACACGGATATTTAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGGGGTCATGAAGGGCCTGGGCCTCCCTGCGTCCGGGTCACCCAGGAACCGTATTTACTCCCCATaGCTGCTCCCTTGTTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: EAGVMKGLGLPASGSPRNRIYSP*LLPCCV Trigger: GACACAACAAGGGAGCAGCCATGGGGAGTAAATACG...GTTCCTGGGTGACCCGGACGCAGGGAGGCCCAGGCCCTTCATGACCCCTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTGCATCACAGGATGTGGACAGGTAGAGTaGCCAGCCCCCTCCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RPDSEGNTVEISGNCITGCGQVE*PAPSKH Trigger: GTGTTTGGAGGGGGCTGGGCACTCTACCTGTCCACA...TCCTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTCAGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCTTGCAGATGAGCCTCTaGCATAGCCTGCAGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QSSTGARLTPAALHGDWPLQMSL*HSLQSS Trigger: GGAGGACTGCAGGCTATGCCAGAGGCTCATCTGCAA...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGTGCCCAGCCCCCTCCAAACACACAGAACAAAGCATCGCATACTAATTCTGCTGCCGGCCACCTaGCACTCCCCTTCCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: GRVPSPLQTHRTKHRILILLPAT*HSPSHD Trigger: ATCATGGGAAGGGGAGTGTCAGGTGGCCGGCAGCAG...AATTAGTATGCGATGCTTTGTTCTGTGTGTTTGGAGGGGGCTGGGCACTCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCTGACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTGCATCACAGTTTCCGGCTCACATTTaGGCGTGGGCATTTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: RGLTARATLWRSRATASQFPAHI*AWAFAN Trigger: GTTTGCAAATGCCCACGCTCAAATGTGAGCCGGAAA...CTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTCAGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCGTTTAAGTGTTCCTaGGACATGCTTCTCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: LQSSTGARLTPAALHGDWPFKCS*DMLLHP Trigger: CGGGTGGAGAAGCATGTCCCAGGAACACTTAAACGG...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCAACACCTTTTCCAGTTaGGCAAGCACGTTTCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: QSSTGARLTPAALHGDWPNTFSS*ASTFPF Trigger: AAACGGAAACGTGCTTGCCCAACTGGAAAAGGTGTT...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGGACACAACTGGGTGTGATTTCCCATCTTCCACCACAGATCCCACAGCCAACACTCCCCTTCCCATaGTGCTCAGCACAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LRTQLGVISHLPPQIPQPTLPFP*CSAQSR Trigger: TCTGCTCTGTGCTGAGCATCATGGGAAGGGGAGTGT...TGGCTGTGGGATCTGTGGTGGAAGATGGGAAATCACACCCAGTTGTGTCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR TCA 90 bp | GTGATTTCCCATCTTCCACCACAGATCCCACAGCCAAGTGTCTATGTGTGCCTTTCGTTCTTGCAGGTCTaGGAACACCTGCAGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VISHLPPQIPQPSVYVCLSFLQV*EHLQPP Trigger: GGGAGGCTGCAGGTGTTCTCAGACCTGCAAGAACGA...AAGGCACACATAGACACTTGGCTGTGGGATCTGTGGTGGAAGATGGGAAATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTGACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTGCATCACAGGCCTCTTCCCCAAAGTaGCAAATCTCAGCATCATTT | + |
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Preference number: 2 (lower is better) Translates to: RGLTARATLWRSRATASQASSPK*QISASF Trigger: AAATGATGCTGAGATTTGCCACTTTGGGGAAGAGGC...CTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTCAGGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CAA 90 bp | GCCTCTGGCATAGCCTGCAGTCCTCCATCCCACATGGATGAATCTTaGATCTTGAACTCCATGAAGTCAGACAGCTTGCAGAGTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ASGIACSPPSHMDES*ILNSMKSDSLQSLL Trigger: CAGGAGACTCTGCAAGCTGTCTGACTTCATGGAGTTCAAGATCAAAGATTCATCCATGTGGGATGGAGGACTGCAGGCTATGCCAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTGGAGAGTCAGCGGTTCCCTTGATCTCAGCCCCCAATCATCTGCCTCTGAAAAAGGTCAGGTCGTaGCTCAAAGCTTGTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PAGESAVPLISAPNHLPLKKVRS*LKACLK Trigger: TTTTAGACAAGCTTTGAGTCACGACCTGACCTTTTT...CAGAGGCAGATGATTGGGGGCTGAGATCAAGGGAACCGCTGACTCTCCAGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CAA 90 bp | GTGCCTGTGTTCCACTCTCTTCTGTTTATCCCATCAATCAACTACTaGCAGATGAGCCTCTGGCATAGCCTGCAGTCCTCCATCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: VPVFHSLLFIPSINY*QMSLWHSLQSSIPH Trigger: ATGTGGGATGGAGGACTGCAGGCTATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAGAAGAGAGTGGAACACAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTGCCTGGATGTTACTAAGGACACAACTGGGTGTGATTTCCCATCTTCCCACAACGTTCTGTTGTaGGACCTAAGCAGGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HCCLDVTKDTTGCDFPSSHNVLL*DLSRVP Trigger: AGGAACCCTGCTTAGGTCTCACAACAGAACGTTGTG...GGAAGATGGGAAATCACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR TCA 90 bp | CTAAGGACACAACTGGGTGTGATTTCCCATCTTCCACCACAGATCCCACAGCCACACAAGTCCTTTCCATaGGTGCATCCCATAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LRTQLGVISHLPPQIPQPHKSFP*VHPIRN Trigger: GTTCCTTATGGGATGCACTCATGGAAAGGACTTGTG...TGGCTGTGGGATCTGTGGTGGAAGATGGGAAATCACACCCAGTTGTGTCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTGGACAGCGGTGTTCAGCATTCCATACATACAAGAGTGCATGCACACTGCAGTTGTAGGATTCTaGGAAGCAGGGGTCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSWTAVFSIPYIQECMHTAVVGF*EAGVMK Trigger: CTTCATGACCCCTGCTTCTCAGAATCCTACAACTGC...AGTGTGCATGCACTCTTGTATGTATGGAATGCTGAACACCGCTGTCCAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGTCCATCCCACATGGATaGATCTTTGATCTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LQSSTGARLTPAALHGDWSIPHG*IFDLEL Trigger: GAGTTCAAGATCAAAGATTCATCCATGTGGGATGGA...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTTCAACCAAGCACGTCTGGACATCAGACCTCAAGGGGAGTGGTATTAACCAAGGAAAAGTTGCCTaGCTGTTGCTCCGAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: AGSTKHVWTSDLKGSGINQGKVA*LLLRVK Trigger: TTTCACTCGGAGCAACAGGCAGGCAACTTTTCCTTG...GTTAATACCACTCCCCTTGAGGTCTGATGTCCAGACGTGCTTGGTTGAACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR GCA 90 bp | AACTGTAAACGAGAAGAACTGGATGCTCACCCCTTCCCTGAGAAGCAGGGGGAAAGAATGTGTCGTTCTTaGAGGTCTGAGAACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: NCKREELDAHPFPEKQGERMCRS*RSENTC Trigger: GCAGGTGTTCTCAGACCTGCAAGAACGACACATTCT...TTCCCCCTGCTTCTCAGGGAAGGGGTGAGCATCCAGTTCTTCTCGTTTACAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGGAGAGTCAGCGGTTCCCTTGATCTCAGCCCCCAATCATCTGCCTCTGGATACCATCTCAAACTaGCTCTTAAGAGCCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: PAGESAVPLISAPNHLPLDTISN*LLRAKI Trigger: TATTTTGGCTCTTAAGAGGCAGTTTGAGATGGTATC...CAGAGGCAGATGATTGGGGGCTGAGATCAAGGGAACCGCTGACTCTCCAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTTACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTACTGGCAAGGTTGGGTaGACAGATTTCATGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: ECYSCLLRVPHTPCSTFLTGKVG*TDFMVT Trigger: AGTCACCATGAAATCTGTCCACCCAACCTTGCCAGT...AAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTGTTCCTCCAGTGCACTaGGCACAGCGTTCTGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SQPPIICLCCSSILSTSSVPPVH*AQRSVV Trigger: CACAACAGAACGCTGTGCCCAGTGCACTGGAGGAAC...AGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCATTGTGGAAAAACTTaGAGACGCCATGGTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: LQSSTGARLTPAALHGDWHCGKT*RRHGKH Trigger: GTGTTTACCATGGCGTCTCCAAGTTTTTCCACAATG...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| 3UTR CAA 90 bp | GATCATGGCATCAAGGAGCACAAAGTAACACAAAGTGGCCAGCAGTaGGGAAACTGTAAACGAGAAGAACTGGATGCTCACCCCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DHGIKEHKVTQSGQQ*GNCKREELDAHPFP Trigger: AGGGAAGGGGTGAGCATCCAGTTCTTCTCGTTTACAGTTTCCCAACTGCTGGCCACTTTGTGTTACTTTGTGCTCCTTGATGCCATGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR GCA 90 bp | AGCACGTCTGGACATCAGACCTCAAGGGGAGTGGTATTAACAGTCAGAGCCAGTGTTCCACACACTCCCTaGTCGACATTCCTTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: STSGHQTSRGVVLTVRASVPHTP*STFLFL Trigger: AAGAAAAAGGAATGTCGAGCAGGGAGTGTGTGGAAC...ACTGGCTCTGACTGTTAATACCACTCCCCTTGAGGTCTGATGTCCAGACGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR-3UTR GCA 90 bp | GATTTCAGGTGTGTGCCACCAGGCCAGCAGAGTGTGAACTTAAAGCTTTGGTACTTTACTCCCCATGGCTaGTCCCTTGTTGTGTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: DFRCVPPGQQSVNLKLWYFTPHG*SLVVSK Trigger: TTTGGACACAACAAGGGAGCAGCCATGGGGAGTAAA...GTACCAAAGCTTTAAGTTCACACTCTGCTGGCCTGGTGGCACACACCTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTGACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTGCATCACAGCCACATTACAGAAAATaGTTCTTGGATTTTGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RGLTARATLWRSRATASQPHYRK*FLDFAV Trigger: AACTGCAAAATCCAAGAACCATTTTCTGTAATGTGG...CTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTCAGGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGAGTGCCCAGCCCCCTCCAAACACACAGAACAAAGCATCGCATACTAATTGGACAGATTTCATGGTaGCTGGCTACAGAAAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: GRVPSPLQTHRTKHRILIGQISW*LATESY Trigger: ATAGCTTTCTGTAGCCAGTCACCATGAAATCTGTCC...AATTAGTATGCGATGCTTTGTTCTGTGTGTTTGGAGGGGGCTGGGCACTCTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTTAGTGACAGATGCCTCTTCCCCAAAGTGGCAAATCTCAGCATCATTTTTGGGAGGGAGCCCTGCTaGCTTAAGCACCTTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: MVSDRCLFPKVANLSIIFGREPC*LKHLSF Trigger: GAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCC...AAAAATGATGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGATTTACTGGCACGAATCATGGTGGTTTTTGATAGAAGCTATCGAAGCAAGTCAGCGGTTCCCTTaGTCTCAGCCCCCAATCATC | + |
|
Preference number: 2 (lower is better) Translates to: CLIYWHESWWFLIEAIEASQRFP*SQPPII Trigger: GATGATTGGGGGCTGAGATCAAGGGAACCGCTGACT...TGCTTCGATAGCTTCTATCAAAAACCACCATGATTCGTGCCAGTAAATCAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTTTAGCTCACTGGCAAGGTTaGGTGGACAGATTTCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: QPPIICLCCSSILSTSSLAHWQG*VDRFHG Trigger: ACCATGAAATCTGTCCACCCAACCTTGCCAGTGAGC...TAAAGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CAA 90 bp | CCTTCATGTCCGCTGACAAGTCTGAAATCCCAGCAATCTGAAAACTaGAGATTTAAAAGGTTTGCACCAGCGAGGAGCAACCATAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PSCPLTSLKSQQSEN*RFKRFAPARSNHSH Trigger: GTGACTATGGTTGCTCCTCGCTGGTGCAAACCTTTTAAATCTCAAGTTTTCAGATTGCTGGGATTTCAGACTTGTCAGCGGACATGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTTTTCTTTCTACAGAAAGCTATGTaGCCTCTAAATGACTGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: TAVCSVFHTLPARHSFFFLQKAM*PLNDCV Trigger: TACGCAGTCATTTAGAGGTCACATAGCTTTCTGTAG...AAAGAAAAAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTTTTCTTTAAACAGAAGCCATTGTaGAAAAACTTGGAGACGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TAVCSVFHTLPARHSFFFKQKPL*KNLETP Trigger: TGGCGTCTCCAAGTTTTTCCACAATGGCTTCTGTTT...AAAGAAAAAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAATCTGTCTCCAGATATCAGTATTGGATGTTATAACAACAGAGTTGCTCTGGTCAGGGAGAGGGGTTaGAAATACTTGGTGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LNLSPDISIGCYNNRVALVRERG*KYLVRC Trigger: GCACCTCACCAAGTATTTTCAACCCCTCTCCCTGAC...CAGAGCAACTCTGTTGTTATAACATCCAATACTGATATCTGGAGACAGATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CAA 90 bp | TTCCTTTCCGGCTCACATTTGAGCGTGGGCATTTGCAAACTACATTaGGACTGTAAAAGTTCCTCCACATTACAGAAAATGGTTCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FLSGSHLSVGICKLH*DCKSSSTLQKMVLG Trigger: TCCAAGAACCATTTTCTGTAATGTGGAGGAACTTTTACAGTCCAAATGTAGTTTGCAAATGCCCACGCTCAAATGTGAGCCGGAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR GCA 90 bp | CATACTAATTTAACACCACAGCCATCAGAGCCACTTACATACATTTTTCAAAACATTTGTGCTGTTAGCTaGTGCCGGCCACCTGACACT | + |
|
Preference number: 2 (lower is better) Translates to: HTNLTPQPSEPLTYIFQNICAVS*CRPPDT Trigger: AGTGTCAGGTGGCCGGCAGCAGCTAACAGCACAAAT...GTTTTGAAAAATGTATGTAAGTGGCTCTGATGGCTGTGGTGTTAAATTAGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | GACAGCGAGGGCAACACTGTGGAGATCTCGGGCAACTaGATCACAGGACGCCGGCAGGCATTCAGGAATCGG | + |
|
Preference number: 3 (lower is better) Translates to: DSEGNTVEISGN*ITGRRQAFRNR Trigger: CCGATTCCTGAATGCCTGCCGGCGTCCTGTGATGCAGTTGCCCGAGATCTCCACAGTGTTGCCCTCGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | GCTCAGCACAGAGCAGACAGGACCGGGAGGGAGCCCTaGTGGCTTAAGCACCTTTCTTTCATTCGCTGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: AQHRADRTGREP*WLKHLSFIRCA Trigger: AGCGCAGCGAATGAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | GGGTTCCTCCAGTGCACTGGGCACAACGTTCTGTTGTaGGACCTAAGCAGGGTTCCTCCAGTGCACTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFLQCTGHNVLL*DLSRVPPVHWA Trigger: TGCCCAGTGCACTGGAGGAACCCTGCTTAGGTCTCACAACAGAACGTTGTGCCCAGTGCACTGGAGGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | ATACAAGAGTGCATGCACACTGCTCCAGAACAGCTCTaGGACGGTGCCCTGGGACCCCTGGCTGAATACGGG | + |
|
Preference number: 3 (lower is better) Translates to: IQECMHTAPEQL*DGALGPLAEYG Trigger: CCCGTATTCAGCCAGGGGTCCCAGGGCACCGTCTCAGAGCTGTTCTGGAGCAGTGTGCATGCACTCTTGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR TCA 72 bp | TACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTaGTTGGCCCGCTCCTTCACAGACTGCAGCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: YRCSANACSSPW*LARSFTDCSKT Trigger: AGTCTTGCTGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGGGCTCACTGGCAAGGTaGGGTGGACAGATTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LQSSTGARLTPAALHGDWGSLAR*GGQISW Trigger: CCATGAAATCTGTCCACCCAACCTTGCCAGTGAGCC...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
||
| 3UTR GCA 72 bp | TTGACCCTAGGGAGGAAAATTTGTGCTGTTAGCTGCTaGCGGCCACCTGACACTCCCCTTCCCATGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LTLGRKICAVSC*RPPDTPLPMML Trigger: GAGCATCATGGGAAGGGGAGTGTCAGGTGGCCGGCAGCAGCTAACAGCACAAATTTTCCTCCCTAGGGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | CTCTTGACCCTAGGGAGGAAAATTTGTGCTGTTAGCTaGTGCCGGCCACCTGACACTCCCCTTCCCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: LLTLGRKICAVS*CRPPDTPLPMM Trigger: CATCATGGGAAGGGGAGTGTCAGGTGGCCGGCAGCAGCTAACAGCACAAATTTTCCTCCCTAGGGTCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CCA 72 bp | GTGGCCAGCAGTTGGGAAACTGTAAACGAGAAGAACTaGATGCTCACCCCTTCCCTGAGAAGCAGGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VASSWETVNEKN*MLTPSLRSRGK Trigger: CTTCCCCCTGCTTCTCAGGGAAGGGGTGAGCATCCAGTTCTTCTCGTTTACAGTTTCCCAACTGCTGGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CCA 72 bp | CCGGGTCACCCAGGAACAGGACGTATTTACTCCCCATaGCTGCTCCCTTGTTGTGTCCAAAGCAAAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGHPGTGRIYSP*LLPCCVQSKGA Trigger: AGCTCCTTTGCTTTGGACACAACAAGGGAGCAGCCATGGGGAGTAAATACGTCCTGTTCCTGGGTGACCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR GCA 72 bp | GTTCAGCATTCCATACATACAAGAGTGCATGCACACTaGTCCAGAACAGCTCTGAGACGGTGCCCTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: VQHSIHTRVHAH*SRTALRRCPGT Trigger: GGTCCCAGGGCACCGTCTCAGAGCTGTTCTGGAGCAGTGTGCATGCACTCTTGTATGTATGGAATGCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR GCA 72 bp | CAGCGGTGTTCAGCATTCCATACATACAAGAGTGCATaGACACTGCTCCAGAACAGCTCTGAGACGGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QRCSAFHTYKSA*TLLQNSSETVP Trigger: GGGCACCGTCTCAGAGCTGTTCTGGAGCAGTGTGCATGCACTCTTGTATGTATGGAATGCTGAACACCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR TCA 72 bp | ACGCACACGTCAGGGAGAGGGGTTGAAAATACTTGGTaGGGTGCAGACTTGAGTCTGAGTGAACTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: THTSGRGVENTW*GADLSLSELRG Trigger: GCCTCTCAGTTCACTCAGACTCAAGTCTGCACCTCACCAAGTATTTTCAACCCCTCTCCCTGACGTGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | GACTGCTTCACCAACGCACACGTCAGGGAGAGGGGTTaGAAATACTTGGTGAGGTGCAGACTTGAGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DCFTNAHVRERG*KYLVRCRLESE Trigger: CTCAGACTCAAGTCTGCACCTCACCAAGTATTTTCAACCCCTCTCCCTGACGTGTGCGTTGGTGAAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | CTTCCACCACAGATCCCACAGCCAAGTGTCTATGTGTaGCTTTCGCTACAGGGGACCAGAAACCCTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPPQIPQPSVYV*LSLQGTRNPIF Trigger: GAAGATAGGGTTTCTGGTCCCCTGTAGCGAAAGGCACACATAGACACTTGGCTGTGGGATCTGTGGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | ATTCATCAAGTAACAGGGGGCGGGGACTGGCACTGCTaGCTGGATGTTACTAAGGACACAACTGGGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IHQVTGGGDWHC*LDVTKDTTGCD Trigger: ATCACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTGCCAGTCCCCGCCCCCTGTTACTTGATGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | TTCATTCATCAAGTAACAGGGGGCGGGGACTGGCACTaGTGCCTGGATGTTACTAAGGACACAACTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FIHQVTGGGDWH*CLDVTKDTTGC Trigger: ACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTGCCAGTCCCCGCCCCCTGTTACTTGATGAATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | GTCACCCAGGAACAGGACGTATTTACTCCCCATGGCTaGTCCCTTGTTGTGTCCAAAGCAAAGGAGCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: VTQEQDVFTPHG*SLVVSKAKELP Trigger: TGGTAGCTCCTTTGCTTTGGACACAACAAGGGAGCAGCCATGGGGAGTAAATACGTCCTGTTCCTGGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR CCA 72 bp | GAGGGTCTGCAAGAGAAGGACAGCTGTGTAAACGGCTaGTTCAACCAAGCACGTCTGGACATCAGACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EGLQEKDSCVNG*FNQARLDIRPQ Trigger: TTGAGGTCTGATGTCCAGACGTGCTTGGTTGAACCAGCCGTTTACACAGCTGTCCTTCTCTTGCAGACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CCA 72 bp | GGGATAGAAGATTGTGTGTCACGGCTGAGATCTTGGTaGGAGAGAGGCTCCTCCATTTCTAGGTTCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GIEDCVSRLRSW*ERGSSISRFRV Trigger: GACCCTGAACCTAGAAATGGAGGAGCCTCTCTCCCACCAAGATCTCAGCCGTGACACACAATCTTCTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCAATATCTCTCTTCTCTaGACCCTAGGGAGGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QSSTGARLTPAALHGDWPNISLL*TLGRKI Trigger: AATTTTCCTCCCTAGGGTCAAGAGAAGAGAGATATT...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGTTACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTGAGTGTTACAGCTGTTaGCTCCGTGTTCCACACACT | + |
|
Preference number: 3 (lower is better) Translates to: ECYSCLLRVPHTPCSTFLECYSC*LRVPHT Trigger: AGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC...AAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
||
| 3UTR TCA 72 bp | AACGGAAGCTATGGATACACAAAAGCCACGGTCGGTTaGGGGTCTGCAAGAGAAGGACAGCTGTGTAAACGG | + |
|
Preference number: 3 (lower is better) Translates to: NGSYGYTKATVG*GSAREGQLCKR Trigger: CCGTTTACACAGCTGTCCTTCTCTTGCAGACCCTCAACCGACCGTGGCTTTTGTGTATCCATAGCTTCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | GGTTCAGGGTCTTTTCCTCTGGGAAAGCTGGTAGATTaGTCACCGTCTGCCAAAGTAAGAAGGCGTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSGSFPLGKLVD*SPSAKVRRRAC Trigger: ACAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACCAGCTTTCCCAGAGGAAAAGACCCTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR TCA 72 bp | CCAGGCCAGCAGAGTGTGAACTTAAAGCTTTGGTACTaGGCTGGACAGCGGTGTTCAGCATTCCATACATAC | + |
|
Preference number: 3 (lower is better) Translates to: PGQQSVNLKLWY*AGQRCSAFHTY Trigger: GTATGTATGGAATGCTGAACACCGCTGTCCAGCTCAGTACCAAAGCTTTAAGTTCACACTCTGCTGGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| 3UTR TCA 72 bp | CTCTTCTGTTTATCCCATCAATCAACTACTTGCAGATaGGCCTCTGGCATAGCCTGCAGTCCTCCATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFCLSHQSTTCR*ASGIACSPPSH Trigger: GTGGGATGGAGGACTGCAGGCTATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR GCA 72 bp | TTTTCCTCTGGGAAAGCTGGTAGATTGATCACCGTCTaGCAAAGTAAGAAGGCGTGCCTGTGTTCCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSSGKAGRLITV*QSKKACLCSTL Trigger: GAGAGTGGAACACAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACCAGCTTTCCCAGAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR CCA 72 bp | GATACATTCATTCATCAAGTAACAGGGGGCGGGGACTaGCACTGCTGCCTGGATGTTACTAAGGACACAACT | + |
|
Preference number: 3 (lower is better) Translates to: DTFIHQVTGGGD*HCCLDVTKDTT Trigger: AGTTGTGTCCTTAGTAACATCCAGGCAGCAGTGCCAGTCCCCGCCCCCTGTTACTTGATGAATGAATGTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCGTGCCTGTGTTCCACTCTCTTCTGTTTATCCCATCAATCAACTACTTGATGAAGTCAGACAGCTaGCAGAGTCTCCTGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGVPVFHSLLFIPSINYLMKSDS*QSLLQG Trigger: TCCCTGCAGGAGACTCTGCAAGCTGTCTGACTTCAT...CAAGTAGTTGATTGATGGGATAAACAGAAGAGAGTGGAACACAGGCACGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR TCA 72 bp | CTCTGGCATAGCCTGCAGTCCTCCATCCCACATGGATaGATCTTTGATCTTGAACTCCATGAAGTCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LWHSLQSSIPHG*IFDLELHEVRQ Trigger: CTGTCTGACTTCATGGAGTTCAAGATCAAAGATTCATCCATGTGGGATGGAGGACTGCAGGCTATGCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR GCA 72 bp | AAAGACAGGACAGACCGGGAAACACCCACCACAGGTTaGTTACATCACGAACATGTTGATCATGGCATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KDRTDRETPTTG*LHHEHVDHGIK Trigger: CTTGATGCCATGATCAACATGTTCGTGATGTAAGCAACCTGTGGTGGGTGTTTCCCGGTCTGTCCTGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCACACCTGGGCAGAGAATGTGTCGTTCTTGCAGGTCTGAGAACACCTGCAGCCTTGGATTTTGCAGTTaGATTTGTAAACCTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: STPGQRMCRSCRSENTCSLGFCS*ICKPQG Trigger: TCCTTGAGGTTTACAAATCAAACTGCAAAATCCAAG...GCTGCAGGTGTTCTCAGACCTGCAAGAACGACACATTCTCTGCCCAGGTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTGTTCAGCAGATGGGCTaGAGAGTTCCTGAATCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SQPPIICLCCSSILSTSSVQQMG*RVPESH Trigger: GTGTGATTCAGGAACTCTCAAGCCCATCTGCTGAAC...AGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTTTTCTTTGACTCTGGTGCTTTTTaGCATACAGCTTTCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAVCSVFHTLPARHSFFFDSGAF*HTAFCA Trigger: GGCACAGAAAGCTGTATGCAAAAAAGCACCAGAGTC...AAAGAAAAAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
||
| 3UTR GCA 72 bp | TCAGAGCCAGTCAGTTCCCAGTTCAGCCCTTCCTCCTaGCTACACATTCCAAATCCTAACAGCAATAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SEPVSSQFSPSS*LHIPNPNSNKK Trigger: CTTTTTATTGCTGTTAGGATTTGGAATGTGTAGGCAGGAGGAAGGGCTGAACTGGGAACTGACTGGCTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | GGTAGATTGATCACCGTCTGCCAAAGTAAGAAGGCGTaGCTGTGTTCCACTCTCTTCTGTTTATCCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRLITVCQSKKA*LCSTLFCLSHQ Trigger: TTGATGGGATAAACAGAAGAGAGTGGAACACAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR CCA 72 bp | GCAGGGTTCCTCCAGTGCACTGGGCACAGCGTTCTGTaGATGCTTAACCAAATTCTGAGAGATAATGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: AGFLQCTGHSVL*MLNQILRDNVY Trigger: ATAAACATTATCTCTCAGAATTTGGTTAAGCATCCACAGAACGCTGTGCCCAGTGCACTGGAGGAACCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | CTCTGGTTAATGACCCATTCCTTTCCGGCTCACATTTaGGCGTGGGCATTTGCAAACTACATTTGGACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LWLMTHSFPAHI*AWAFANYIWTV Trigger: TACAGTCCAAATGTAGTTTGCAAATGCCCACGCTCAAATGTGAGCCGGAAAGGAATGGGTCATTAACCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | CCATTCCTTTCCGGCTCACATTTGAGCGTGGGCATTTaGAAACTACATTTGGACTGTAAAAGTTCCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: PFLSGSHLSVGI*KLHLDCKSSST Trigger: TGTGGAGGAACTTTTACAGTCCAAATGTAGTTTGCAAATGCCCACGCTCAAATGTGAGCCGGAAAGGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTATCCCATCAATCAACTACTTGCAGATGAGCCTCTGGCATAGCCTGCAGGATGAATCTTTGATCTaGAACTCCATGAAGTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFIPSINYLQMSLWHSLQDESLI*NSMKSD Trigger: GTCTGACTTCATGGAGTTCAAGATCAAAGATTCATC...CTGCAGGCTATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR TCA 72 bp | ACTATTCTTAAAAGGGACTTGATGTTTCTGGGTAACTaGACCATTGTAGGGGGCAAGACAAAGGGCAACGGA | + |
|
Preference number: 3 (lower is better) Translates to: TILKRDLMFLGN*TIVGGKTKGNG Trigger: TCCGTTGCCCTTTGTCTTGCCCCCTACAATGGTTCAGTTACCCAGAAACATCAAGTCCCTTTTAAGAATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | GCAAGTGGGAAGACACACTATCGACAGCCAAGAGGCTaGATCTGTCTCCAGATATCAGTATTGGATGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: ASGKTHYRQPRG*ICLQISVLDVI Trigger: TATAACATCCAATACTGATATCTGGAGACAGATTCAGCCTCTTGGCTGTCGATAGTGTGTCTTCCCACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | TATCCGTGTGTTCACATATGCATGGTTAGTGACAGATaGCTCTTCCCCAAAGTGGCAAATCTCAGCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: YPCVHICMVSDR*LFPKVANLSII Trigger: AATGATGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACACACGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CCA 72 bp | ATCATGGTGGTTTTTGATAGAAGCTATCGAAGCAAGTaGGAAGACACACTATCGACAGCCAAGAGGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IMVVFDRSYRSK*EDTLSTAKRLN Trigger: ATTCAGCCTCTTGGCTGTCGATAGTGTGTCTTCCCACTTGCTTCGATAGCTTCTATCAAAAACCACCATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR CCA 72 bp | TATGCATGGTTAGTGACAGATGCCTCTTCCCCAAAGTaGCAAATCTCAGCATCATTTTTAAAGACAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: YAWLVTDASSPK*QISASFLKTGQ Trigger: CTGTCCTGTCTTTAAAAATGATGCTGAGATTTGCCACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | CACTCTCTTCTGTTTATCCCATCAATCAACTACTTGCAGATGAGCCTCTGGCATCACATGGATGAATCTTaGATCTTGAACTCCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSLLFIPSINYLQMSLWHHMDES*ILNSMK Trigger: CTTCATGGAGTTCAAGATCAAAGATTCATCCATGTG...ATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAGAAGAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| 3UTR TCA 72 bp | TTTGAGAAATGTATTCACACCCACAAGTCCTTTCCATaGGTGCATCCCATAAGGAACACACTCAAATCATGT | + |
|
Preference number: 3 (lower is better) Translates to: FEKCIHTHKSFP*VHPIRNTLKSC Trigger: ACATGATTTGAGTGTGTTCCTTATGGGATGCACTCATGGAAAGGACTTGTGGGTGTGAATACATTTCTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR GCA 72 bp | ATTTGCTCATTTCTTAAATATCCGTGTGTTCACATATaGATGGTTAGTGACAGATGCCTCTTCCCCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ICSFLKYPCVHI*MVSDRCLFPKV Trigger: CACTTTGGGGAAGAGGCATCTGTCACTAACCATGCATATGTGAACACACGGATATTTAAGAAATGAGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACTAATTTAACACCACAGCCATCAGAGCCACTTACATACATTTTTCAAAACTTTGAGCGTGGGCATTaGCAAACTACATTTGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: HTNLTPQPSEPLTYIFQNFERGH*QTTFGL Trigger: CAGTCCAAATGTAGTTTGCAAATGCCCACGCTCAAA...GTTTTGAAAAATGTATGTAAGTGGCTCTGATGGCTGTGGTGTTAAATTAGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATCTGTCTCCAGATATCAGTATTGGATGTTATAACAACAGAGTTGCTCTGACTAGCTTTAACAGCTaGAAATACAGGTGTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LNLSPDISIGCYNNRVALTSFNS*KYRCWC Trigger: ACACCAACACCTGTATTTCAAGCTGTTAAAGCTAGT...CAGAGCAACTCTGTTGTTATAACATCCAATACTGATATCTGGAGACAGATTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| 3UTR TCA 72 bp | CGAATACTCAAGTTTCCCAATTCCTCATATATAGGCTaGTACCATCTCAAACTGCCTCTTAAGAGCCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RILKFPNSSYIG*YHLKLPLKSQN Trigger: ATTTTGGCTCTTAAGAGGCAGTTTGAGATGGTATCAGCCTATATATGAGGAATTGGGAAACTTGAGTATTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGGGGTCATGAAGGGCCTGGGCCTCCCTGCGTCCGGGTCACCCAGGAACCATCGTTTGGTGCGGTaGGAGGGGACCAGACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EAGVMKGLGLPASGSPRNHRLVR*EGTRRR Trigger: ACGGCGTCTGGTCCCCTCCCACCGCACCAAACGATG...GTTCCTGGGTGACCCGGACGCAGGGAGGCCCAGGCCCTTCATGACCCCTGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| CDS-3UTR TCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAATGTGGCCAGCCACCTaGTGCGACAGCGGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAMWPAT*CDSGTQ Trigger: CTGCGTGCCGCTGTCGCATCAGGTGGCTGGCCACAT...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCATGTGGCCAGCCACCTaGTGCGACAGCGGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSTGARLTPAALHGDWPMWPAT*CDSGTQ Trigger: CTGCGTGCCGCTGTCGCATCAGGTGGCTGGCCACAT...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGAGCAGACAGGACCGGGAGGGAGCCCTGCTGGCTTAAGCACCTTTCTTCATCGTTTGGTGCGGTaGGAGGGGACCAGACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STEQTGPGGSPAGLSTFLHRLVR*EGTRRR Trigger: ACGGCGTCTGGTCCCCTCCCACCGCACCAAACGATG...AAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCACCGTCAGGGGTCCTTTaGAGAGAAACCTCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAPSGVL*RETSPP Trigger: TGGCGGGGAGGTTTCTCTCCAAAGGACCCCTGACGG...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR CCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCATCGTTTGGTGCGGTaGGAGGGGACCAGACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSSTGARLTPAALHGDWHRLVR*EGTRRR Trigger: ACGGCGTCTGGTCCCCTCCCACCGCACCAAACGATG...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGGGGCGCCGAACAGGTaGAAGTTGTTATTGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAGAPNR*KLLLHS Trigger: GGAGTGCAATAACAACTTCCACCTGTTCGGCGCCCC...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGTACCATCTGGGTaGTGGAGTATGCCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GARLTPAALHGDWPAPSQTVPSG*WSMPTL Trigger: CAAAGTGGGCATACTCCAGCACCCAGATGGTACAGT...CTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGTACCATCTGGGTGCTaGAGTATGCCCACTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAVPSGC*SMPTLS Trigger: GGACAAAGTGGGCATACTCCAGCACCCAGATGGTAC...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGGACCGGGAGGGAGCCCTGCTGGCTTAAGCACCTTTCTTTCATTCGCGGGGCGCCGAACAGGTaGAAGTTGTTATTGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADRTGREPCWLKHLSFIRGAPNR*KLLLHS Trigger: GGAGTGCAATAACAACTTCCACCTGTTCGGCGCCCC...GCGAATGAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCAGTGTTCCTGGGACATaGTTCTCCACCCGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSTGARLTPAALHGDWPSVPGT*FSTRCL Trigger: AAGACAACGGGTGGAGAAGCATGTCCCAGGAACACT...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGGACCGGGAGGGAGCCCTGCTGGCTTAAGCACCTTTCTTTCATTCGCCCGTTTAAGTGTTCCTaGGACATGCTTCTCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ADRTGREPCWLKHLSFIRPFKCS*DMLLHP Trigger: CGGGTGGAGAAGCATGTCCCAGGAACACTTAAACGG...GCGAATGAAAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | ACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGCAAGACCGTTTAAGTGTTCCTaGGACATGCTTCTCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TPAALHGDWPAPSQTAARPFKCS*DMLLHP Trigger: CGGGTGGAGAAGCATGTCCCAGGAACACTTAAACGG...TCTTGCTGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR GCA 90 bp | AGCACAGAGCAGACAGGACCGGGAGGGAGCCCTGCTGGCTTAAGCACCTTTCTTACTGTACCATCTGGGTaGTGGAGTATGCCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STEQTGPGGSPAGLSTFLTVPSG*WSMPTL Trigger: CAAAGTGGGCATACTCCAGCACCCAGATGGTACAGT...AAGAAAGGTGCTTAAGCCAGCAGGGCTCCCTCCCGGTCCTGTCTGCTCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR TCA 90 bp | ACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGCAAGAATCTTCTCTACCTTCTaGATACTGGCGGCAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPAALHGDWPAPSQTAARIFSTF*ILAAIA Trigger: TGCGATTGCCGCCAGTATTCAGAAGGTAGAGAAGAT...TCTTGCTGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR GCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGGATGATAAACCCTCATaGCGAGCACCAGGAACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSSTGARLTPAALHGDWDDKPS*RAPGTR Trigger: TCGGGTTCCTGGTGCTCGGCATGAGGGTTTATCATC...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAACTAGTGAGTATGTAAAAGGAGGAGGGGTGCTCACAACCCACACTATGTGGCCAGCCACCTaGTGCGACAGCGGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEETSEYVKGGGVLTTHTMWPAT*CDSGTQ Trigger: CTGCGTGCCGCTGTCGCATCAGGTGGCTGGCCACAT...AGTGTGGGTTGTGAGCACCCCTCCTCCTTTTACATACTCACTAGTTTCTTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGTCAGAGGGTACTTGCTaGCCTGCTGCTGAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSSTGARLTPAALHGDWSEGTC*PAAESS Trigger: AGAAGATTCAGCAGCAGGTCAGCAAGTACCCTCTGA...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCAGTAGCTGGCTGAGATaGACCTTCATAAACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSTGARLTPAALHGDWPSSWLR*TFINKQ Trigger: CTGTTTGTTTATGAAGGTTCATCTCAGCCAGCTACT...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGTGCCCAGCCCCCTCCAAACACACAGAACAAAGCATCGCATACTAATTGTACACATCGTTTGGTaGGGTGGGAGGGGACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRVPSPLQTHRTKHRILIVHIVW*GGRGPD Trigger: GTCTGGTCCCCTCCCACCGCACCAAACGATGTGTAC...AATTAGTATGCGATGCTTTGTTCTGTGTGTTTGGAGGGGGCTGGGCACTCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGAACAGGACGTATTTACTCCCCATGGCTGCTCCCTTGTTGTGTCCAAGTACCATCTGGGTGCTaGAGTATGCCCACTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPGTGRIYSPWLLPCCVQVPSGC*SMPTLS Trigger: GGACAAAGTGGGCATACTCCAGCACCCAGATGGTAC...TTGGACACAACAAGGGAGCAGCCATGGGGAGTAAATACGTCCTGTTCCTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCACAGCAGCGTAAACCATaGTATAAAATTCCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAQQRKP*YKIPAL Trigger: GAGAGCTGGAATTTTATACCATGGTTTACGCTGCTG...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCCAGCAGCGTAAACCATaGTATAAAATTCCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSTGARLTPAALHGDWPQQRKP*YKIPAL Trigger: GAGAGCTGGAATTTTATACCATGGTTTACGCTGCTG...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAAAACAGAAGCCATTGTaGAAAAACTTGGAGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTPAALHGDWPAPSQTAKQKPL*KNLETP Trigger: AGGCGTCTCCAAGTTTTTCCACAATGGCTTCTGTTT...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| 3UTR CAA 72 bp | TGTGCCACCAGGCCAGCAGAGTGTGAACTTAAAGCTTaGGTACTGAGCTGGACAGCGGTGTTCAGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CATRPAECELKA*VLSWTAVFSIP Trigger: TGGAATGCTGAACACCGCTGTCCAGCTCAGTACCAAAGCTTTAAGTTCACACTCTGCTGGCCTGGTGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
||
| CDS-3UTR TCA 90 bp | TCCACACCTGGGCAGAGAATGTGTCGTTCTTGCAGGTCTGAGAACACCTGCAGCATCTTCTCTACCTTCTaGATACTGGCGGCAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: STPGQRMCRSCRSENTCSIFSTF*ILAAIA Trigger: TGCGATTGCCGCCAGTATTCAGAAGGTAGAGAAGAT...GCTGCAGGTGTTCTCAGACCTGCAAGAACGACACATTCTCTGCCCAGGTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCATTGTGGAAAAACTTaGAGACGCCTTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSSTGARLTPAALHGDWHCGKT*RRLPSG Trigger: CCCTGAAGGAAGGCGTCTCCAAGTTTTTCCACAATG...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR CCA 90 bp | ACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGCAAGAAAACAGAAGCCATTGTaGAAAAACTTGGAGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPAALHGDWPAPSQTAARKQKPL*KNLETP Trigger: AGGCGTCTCCAAGTTTTTCCACAATGGCTTCTGTTT...TCTTGCTGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCTGCCTGGATGTTACTAAGGACACAACTGGGTGTGATTTCCCATCTTCCGATGATAAACCCTCATaGCGAGCACCAGGAACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HCCLDVTKDTTGCDFPSSDDKPS*RAPGTR Trigger: TCGGGTTCCTGGTGCTCGGCATGAGGGTTTATCATC...GGAAGATGGGAAATCACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCCCATCTTCCACCACAGATCCCACAGCCAAGTGTCTATGTGTGCCTTGTACCATCTGGGTGCTaGAGTATGCCCACTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VISHLPPQIPQPSVYVCLVPSGC*SMPTLS Trigger: GGACAAAGTGGGCATACTCCAGCACCCAGATGGTAC...AAGGCACACATAGACACTTGGCTGTGGGATCTGTGGTGGAAGATGGGAAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
||
| CDS-3UTR CCA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGAACACCTTTTCCAGTTaGGCAAGCACGTTTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSSTGARLTPAALHGDWNTFSS*ASTFPF Trigger: AAACGGAAACGTGCTTGCCCAACTGGAAAAGGTGTT...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
||
| 3UTR CAA 72 bp | AGGTTCAGGGTCTTTTCCTCTGGGAAAGCTGGTAGATaGATCACCGTCTGCCAAAGTAAGAAGGCGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFRVFSSGKAGR*ITVCQSKKACL Trigger: CAGGCACGCCTTCTTACTTTGGCAGACGGTGATCAATCTACCAGCTTTCCCAGAGGAAAAGACCCTGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATCTGTCTCCAGATATCAGTATTGGATGTTATAACAACAGAGTTGCTCTGATGTGGCCAGCCACCTaGTGCGACAGCGGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSPDISIGCYNNRVALMWPAT*CDSGTQ Trigger: CTGCGTGCCGCTGTCGCATCAGGTGGCTGGCCACAT...CAGAGCAACTCTGTTGTTATAACATCCAATACTGATATCTGGAGACAGATTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR GCA 90 bp | CAGCGGTGTTCAGCATTCCATACATACAAGAGTGCATGCACACTGCTCCAGAACACTGTACCATCTGGGTaGTGGAGTATGCCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: QRCSAFHTYKSACTLLQNTVPSG*WSMPTL Trigger: CAAAGTGGGCATACTCCAGCACCCAGATGGTACAGT...GTTCTGGAGCAGTGTGCATGCACTCTTGTATGTATGGAATGCTGAACACCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| CDS-3UTR GCA 90 bp | CACTGCTGCCTGGATGTTACTAAGGACACAACTGGGTGTGATTTCCCATCTTCCAGTGTTCCTGGGACATaGTTCTCCACCCGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HCCLDVTKDTTGCDFPSSSVPGT*FSTRCL Trigger: AAGACAACGGGTGGAGAAGCATGTCCCAGGAACACT...GGAAGATGGGAAATCACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR GCA 90 bp | GAGTGTTACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTACTAAATCTGGTGAGTaGCATCTTGCTGACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ECYSCLLRVPHTPCSTFLTKSGE*HLADCS Trigger: GCTGCAGTCAGCAAGATGGCACTCACCAGATTTAGT...AAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| CDS-3UTR GCA 90 bp | AAAGCTTTGGTACTGAGCTGGACAGCGGTGTTCAGCATTCCATACATACAAGAGGATGATAAACCCTCATaGCGAGCACCAGGAACCCGA | + |
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Preference number: 4 (lower is better) Translates to: KALVLSWTAVFSIPYIQEDDKPS*RAPGTR Trigger: TCGGGTTCCTGGTGCTCGGCATGAGGGTTTATCATC...CTCTTGTATGTATGGAATGCTGAACACCGCTGTCCAGCTCAGTACCAAAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| CDS-3UTR CCA 90 bp | TCTCAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTCAGAACTGTACCATCTaGGTGCTGGAGTATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SQPPIICLCCSSILSTSSQNCTI*VLEYAH Trigger: GTGGGCATACTCCAGCACCCAGATGGTACAGTTCTG...AGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CAA 72 bp | AATGACTGCGTAATGATTTGCGAGTGTTACAGCTGTTaGCTCCGTGTTCCACACACTCCCTGCTCGACATTC | + |
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Preference number: 4 (lower is better) Translates to: NDCVMICECYSC*LRVPHTPCSTF Trigger: GAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTCGCAAATCATTACGCAGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
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| 3UTR CAA 72 bp | TTCCACTCTCTTCTGTTTATCCCATCAATCAACTACTaGCAGATGAGCCTCTGGCATAGCCTGCAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FHSLLFIPSINY*QMSLWHSLQSS Trigger: GGAGGACTGCAGGCTATGCCAGAGGCTCATCTGCAAGTAGTTGATTGATGGGATAAACAGAAGAGAGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| CDS-3UTR CCA 90 bp | GTGATTTCCCATCTTCCACCACAGATCCCACAGCCAAGTGTCTATGTGTGCCTTAACACCTTTTCCAGTTaGGCAAGCACGTTTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: VISHLPPQIPQPSVYVCLNTFSS*ASTFPF Trigger: AAACGGAAACGTGCTTGCCCAACTGGAAAAGGTGTT...AAGGCACACATAGACACTTGGCTGTGGGATCTGTGGTGGAAGATGGGAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CCA 90 bp | TCTCAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTCATTGTGGAAAAACTTaGAGACGCCTTCCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQPPIICLCCSSILSTSSHCGKT*RRLPSG Trigger: CCCTGAAGGAAGGCGTCTCCAAGTTTTTCCACAATG...AGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| 3UTR CAA 72 bp | TGCAGTCCTCCATCCCACATGGATGAATCTTTGATCTaGAACTCCATGAAGTCAGACAGCTTGCAGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSPPSHMDESLI*NSMKSDSLQSL Trigger: GAGACTCTGCAAGCTGTCTGACTTCATGGAGTTCAAGATCAAAGATTCATCCATGTGGGATGGAGGACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| 3UTR CAA 72 bp | ATAGCCTGCAGTCCTCCATCCCACATGGATGAATCTTaGATCTTGAACTCCATGAAGTCAGACAGCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IACSPPSHMDES*ILNSMKSDSLQ Trigger: CTGCAAGCTGTCTGACTTCATGGAGTTCAAGATCAAAGATTCATCCATGTGGGATGGAGGACTGCAGGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141984.2 |
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| CDS-3UTR GCA 90 bp | GGAGACGCCATGGTAAACACACTTTTCTCTCTCTACATTCCTAATGTAAAAGGTGATGATAAACCCTCATaGCGAGCACCAGGAACCCGA | + |
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Preference number: 4 (lower is better) Translates to: GDAMVNTLFSLYIPNVKGDDKPS*RAPGTR Trigger: TCGGGTTCCTGGTGCTCGGCATGAGGGTTTATCATC...ACCTTTTACATTAGGAATGTAGAGAGAGAAAAGTGTGTTTACCATGGCGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| CDS-3UTR CCA 90 bp | GGAGACGCCATGGTAAACACACTTTTCTCTCTCTACATTCCTAATGTAAAAGGTGTACCATCTGGGTGCTaGAGTATGCCCACTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GDAMVNTLFSLYIPNVKGVPSGC*SMPTLS Trigger: GGACAAAGTGGGCATACTCCAGCACCCAGATGGTAC...ACCTTTTACATTAGGAATGTAGAGAGAGAAAAGTGTGTTTACCATGGCGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCAGCATTCCATACATACAAGAGTGCATGCACACTGCTCCAGAACAGCTCAGCAGCGTAAACCATaGTATAAAATTCCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GVQHSIHTRVHAHCSRTAQQRKP*YKIPAL Trigger: GAGAGCTGGAATTTTATACCATGGTTTACGCTGCTG...AGCTGTTCTGGAGCAGTGTGCATGCACTCTTGTATGTATGGAATGCTGAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| 3UTR CAA 72 bp | ATCAAGGAGCACAAAGTAACACAAAGTGGCCAGCAGTaGGGAAACTGTAAACGAGAAGAACTGGATGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: IKEHKVTQSGQQ*GNCKREELDAH Trigger: GTGAGCATCCAGTTCTTCTCGTTTACAGTTTCCCAACTGCTGGCCACTTTGTGTTACTTTGTGCTCCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR GCA 90 bp | GGAGACGCCATGGTAAACACACTTTTCTCTCTCTACATTCCTAATGTAAAAGGTACTGTACCATCTGGGTaGTGGAGTATGCCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: GDAMVNTLFSLYIPNVKGTVPSG*WSMPTL Trigger: CAAAGTGGGCATACTCCAGCACCCAGATGGTACAGT...ACCTTTTACATTAGGAATGTAGAGAGAGAAAAGTGTGTTTACCATGGCGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTTTACAGCAGCGTAAACCATaGTATAAAATTCCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPPIICLCCSSILSTSSLQQRKP*YKIPAL Trigger: GAGAGCTGGAATTTTATACCATGGTTTACGCTGCTG...TAAAGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR GCA 90 bp | AACCCACACTTTACCATGGTAAACACACTTTTCTCTCTCTACATTCCTAATGTAACTAAATCTGGTGAGTaGCATCTTGCTGACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NPHFTMVNTLFSLYIPNVTKSGE*HLADCS Trigger: GCTGCAGTCAGCAAGATGGCACTCACCAGATTTAGT...TACATTAGGAATGTAGAGAGAGAAAAGTGTGTTTACCATGGTAAAGTGTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| CDS-3UTR CAA 90 bp | TTACAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCACCGACATCCCGTaGGGCGGGGCGCCGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LQSSTGARLTPAALHGDWPTDIP*GGAPNR Trigger: CCTGTTCGGCGCCCCGCCCAACGGGATGTCGGTGGG...CCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTGTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
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| CDS-3UTR CAA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCACTGGTGAGTGCCATCTaGCTGACTGCAGCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RLTPAALHGDWPAPSQTALVSAI*LTAAAA Trigger: GGCTGCTGCTGCAGTCAGCAAGATGGCACTCACCAG...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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| CDS CCA 90 bp | ACACATCGTTTGGTGCGGTGGGAGGGGACCAGACGCCGTAGTATTTaGGCAGGTGTTTTCGCAGCTCCAGGAGAACAGCATCGGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: THRLVRWEGTRRRSI*AGVFAAPGEQHRHS Trigger: ACTGTGCCGATGCTGTTCTCCTGGAGCTGCGAAAACACCTGCCCAAATACTACGGCGTCTGGTCCCCTCCCACCGCACCAAACGATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000118381.8 ENSMUST00000147277.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGTACAGGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCTGGAGTATGCCCACTTaGTCCTTGCCGTACATGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSSTGARLTPAALHGDWPWSMPT*SLPYMW Trigger: CCACATGTACGGCAAGGACAAAGTGGGCATACTCCA...GGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACCTGTACTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 ENSMUST00000147277.8 |
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| CDS-3UTR CAA 90 bp | GGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGGACTCTGGTGCTTTTTaGCATACAGCTTTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: GARLTPAALHGDWPAPSQDSGAF*HTAFCA Trigger: GGCACAGAAAGCTGTATGCAAAAAAGCACCAGAGTC...CTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
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| CDS-3UTR CAA 90 bp | CGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGACTGCAGAACACCTTTTCCAGTaGGGCAAGCACGTTTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: RLTPAALHGDWPAPSQTAEHLFQ*GKHVSV Trigger: AACGGAAACGTGCTTGCCCAACTGGAAAAGGTGTTC...TGCAGTCTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTCGGCTAACGCCTGCAGCTCTCCATGGTGATTGGCCCGCTCCTTCACAGCTTAAACAGAAGCCATaGTGGAAAAACTTGGAGACG | + |
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Preference number: 5 (lower is better) Translates to: GARLTPAALHGDWPAPSQLKQKP*WKNLET Trigger: CGTCTCCAAGTTTTTCCACAATGGCTTCTGTTTAAG...CTGTGAAGGAGCGGGCCAATCACCATGGAGAGCTGCAGGCGTTAGCCGAGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000121446.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGATTTACTGGCACGAATCATGGTGGTTTTTGATAGAAGCTATCGAAGCACCCACCGACATCCCGTaGGGCGGGGCGCCGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: CLIYWHESWWFLIEAIEAPTDIP*GGAPNR Trigger: CCTGTTCGGCGCCCCGCCCAACGGGATGTCGGTGGG...TGCTTCGATAGCTTCTATCAAAAACCACCATGATTCGTGCCAGTAAATCAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CAA 90 bp | GAGTGTTACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTTGGAGTATGCCCACTTaGTCCTTGCCGTACATGTGG | + |
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Preference number: 5 (lower is better) Translates to: ECYSCLLRVPHTPCSTFLWSMPT*SLPYMW Trigger: CCACATGTACGGCAAGGACAAAGTGGGCATACTCCA...AAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079252.13 ENSMUST00000147277.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTCAACCAAGCACGTCTGGACATCAGACCTCAAGGGGAGTGGTATTAACCCATTGTGGAAAAACTaGGAGACGCCTTCCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGSTKHVWTSDLKGSGINPLWKN*ETPSFR Trigger: CCTGAAGGAAGGCGTCTCCAAGTTTTTCCACAATGG...GTTAATACCACTCCCCTTGAGGTCTGATGTCCAGACGTGCTTGGTTGAACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CAA 90 bp | GAGTGTTACAGCTGTTTGCTCCGTGTTCCACACACTCCCTGCTCGACATTCCTTGAACACCTTTTCCAGTaGGGCAAGCACGTTTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: ECYSCLLRVPHTPCSTFLEHLFQ*GKHVSV Trigger: AACGGAAACGTGCTTGCCCAACTGGAAAAGGTGTTC...AAGGAATGTCGAGCAGGGAGTGTGTGGAACACGGAGCAAACAGCTGTAACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CAA 90 bp | GTATGTAAAAGGAGGAGGGGTGCTCACAACCCACACTTTACCATGGTAAACACATGGAGTATGCCCACTTaGTCCTTGCCGTACATGTGG | + |
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Preference number: 5 (lower is better) Translates to: VCKRRRGAHNPHFTMVNTWSMPT*SLPYMW Trigger: CCACATGTACGGCAAGGACAAAGTGGGCATACTCCA...TGTGTTTACCATGGTAAAGTGTGGGTTGTGAGCACCCCTCCTCCTTTTACATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| CDS-3UTR CAA 90 bp | GGTAGAGTGCCCAGCCCCCTCCAAACACACAGAACAAAGCATCGCATACTAATTCTTAAACAGAAGCCATaGTGGAAAAACTTGGAGACG | + |
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Preference number: 5 (lower is better) Translates to: GRVPSPLQTHRTKHRILILKQKP*WKNLET Trigger: CGTCTCCAAGTTTTTCCACAATGGCTTCTGTTTAAG...AATTAGTATGCGATGCTTTGTTCTGTGTGTTTGGAGGGGGCTGGGCACTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CAA 90 bp | TCTCAGCCCCCAATCATCTGCCTCTGTTGTAGCTCAATACTTAGCACTTCATCTGACTCTGGTGCTTTTTaGCATACAGCTTTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SQPPIICLCCSSILSTSSDSGAF*HTAFCA Trigger: GGCACAGAAAGCTGTATGCAAAAAAGCACCAGAGTC...AGATGAAGTGCTAAGTATTGAGCTACAACAGAGGCAGATGATTGGGGGCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079252.13 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGATTTATAATTTAACCCCACATGTGCTGGGATTTCAGGTGTGTGCCCTGGTGAGTGCCATCTaGCTGACTGCAGCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ILLIYNLTPHVLGFQVCALVSAI*LTAAAA Trigger: GGCTGCTGCTGCAGTCAGCAAGATGGCACTCACCAG...GGCACACACCTGAAATCCCAGCACATGTGGGGTTAAATTATAAATCAATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118381.8 |
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| CDS-3UTR CAA 90 bp | AAACTTGGAGACGCCATGGTAAACACACTTTTCTCTCTCTACATTCCTAATGTATGGAGTATGCCCACTTaGTCCTTGCCGTACATGTGG | + |
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Preference number: 5 (lower is better) Translates to: KLGDAMVNTLFSLYIPNVWSMPT*SLPYMW Trigger: CCACATGTACGGCAAGGACAAAGTGGGCATACTCCA...TACATTAGGAATGTAGAGAGAGAAAAGTGTGTTTACCATGGCGTCTCCAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147277.8 |
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