Pregenerated sensors for IPCEF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064065Ensembl transcript IDs: ENSMUST00000078070.10, ENSMUST00000086896.10, ENSMUST00000105617.8, ENSMUST00000145156.8, ENSMUST00000151960.2, ENSMUST00000170680.8
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCAGCGGGACCTTTCGGGAGACACTGCTCACAGCAGTGCCTCTaGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCAGAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: KAAGPFGRHCSQQCL*GFSRSRRSQVCRTQ Trigger: CTGGGTTCTGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGCAGTGTCTCCCGAAAGGTCCCGCTGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | CAGGAGGAAATGGAATCAGTCCTGATAGGCATTAGCATCTCCAACTaGATGGATCCATGGAGGGCCCTGCAGGGCCTCTCAGCTCATCCC | + |
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Preference number: 1 (lower is better) Translates to: QEEMESVLIGISISN*MDPWRALQGLSAHP Trigger: GGGATGAGCTGAGAGGCCCTGCAGGGCCCTCCATGGATCCATGCAGTTGGAGATGCTAATGCCTATCAGGACTGATTCCATTTCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | CATTTGATCCCCCAGCAGGCTAAGCGGAGACAAGCATTCCTCCTCTaGAGAGGGGCTGACAGACCTGAAATTCAAACTCAGATTCCGGCT | + |
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Preference number: 1 (lower is better) Translates to: HLIPQQAKRRQAFLL*RGADRPEIQTQIPA Trigger: AGCCGGAATCTGAGTTTGAATTTCAGGTCTGTCAGCCCCTCTGCAGAGGAGGAATGCTTGTCTCCGCTTAGCCTGCTGGGGGATCAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 90 bp | AAAGAAACAACAATCAGGCCAAGCTCCAGTTCTCAGAAAACCCAGTaGCAAGGCAGCGGGACCTTTCGGGAGACACTGCTCACAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KETTIRPSSSSQKTQ*QGSGTFRETLLTAV Trigger: CACTGCTGTGAGCAGTGTCTCCCGAAAGGTCCCGCTGCCTTGCCACTGGGTTTTCTGAGAACTGGAGCTTGGCCTGATTGTTGTTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | AGGACTCCCACTGCATCAAAACTGGCTTCACCTCAGTTGCATCCTTaGGGGGAATGGATGATGTCTCAGGAACTGGGTTTGGGATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RTPTASKLASPQLHP*GEWMMSQELGLGFP Trigger: AGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGGGAGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR TCA 90 bp | TGTTCCCTCTGTGTGACTATGTGGTCTGAACCCTCCCTGAGGGAATaGGCCTCATCACAAATCCGTGGCTCATTTCTAATCCCTAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: CSLCVTMWSEPSLRE*ASSQIRGSFLIPKS Trigger: AGACTTAGGGATTAGAAATGAGCCACGGATTTGTGATGAGGCTCATTCCCTCAGGGAGGGTTCAGACCACATAGTCACACAGAGGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 90 bp | ACTGCATCAAAACTGGCTTCACCTCAGTTGCATCCTTGCGGGGAATaGATGATGTCTCAGGAACTGGGTTTGGGATTTCCTTGTAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: TASKLASPQLHPCGE*MMSQELGLGFPCKQ Trigger: CTGCTTACAAGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | TGCGACATATGTGTGTTAGCAACTTCTCAACTAGTGAGGGTCCTCTaGCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGAAAGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: CDICVLATSQLVRVL*QALIWVFRSERKSP Trigger: AGGACTCTTTCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAGGACCCTCACTAGTTGAGAAGTTGCTAACACACATATGTCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | GGAAAAATGCCTCCTCCTTGGGCTATCCATTCTCTGCCCCCACCATaGTCTACTCTGCAAATAAGTGCTCAGCAAATAGAACATCAACAT | + |
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Preference number: 1 (lower is better) Translates to: GKMPPPWAIHSLPPP*STLQISAQQIEHQH Trigger: ATGTTGATGTTCTATTTGCTGAGCACTTATTTGCAGAGTAGAGCATGGTGGGGGCAGAGAATGGATAGCCCAAGGAGGAGGCATTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | GGCTATCCATTCTCTGCCCCCACCATGCTCTACTCTGCAAATAAGTaGTCAGCAAATAGAACATCAACATTAAGAAGAGCCTTGTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: GYPFSAPTMLYSANK*SANRTSTLRRALCS Trigger: GGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGAGCACTTATTTGCAGAGTAGAGCATGGTGGGGGCAGAGAATGGATAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 90 bp | CACTTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATaGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTAACACACGAA | + |
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Preference number: 1 (lower is better) Translates to: HLMTTDEYVAQRRVT*LGCESSEMSRVTHE Trigger: TTCGTGTGTTACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| 3UTR GCA 90 bp | GTTCCAGTAGCTAATAAGGAAGAAATTCCTCCACTCACAACGTTTTaGAGAACTTGGCTGCCCACCAAAGGGAGTTCTTCATGCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VPVANKEEIPPLTTF*RTWLPTKGSSSCFF Trigger: AAAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTTGTGAGTGGAGGAATTTCTTCCTTATTAGCTACTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 90 bp | AGAACTCTTATAAATGACAGACATCTTGCAAACAACAGAAAAACGTaGGACATATGTGTGTTAGCAACTTCTCAACTAGTGAGGGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RTLINDRHLANNRKT*DICVLATSQLVRVL Trigger: GAGGACCCTCACTAGTTGAGAAGTTGCTAACACACATATGTCGCACGTTTTTCTGTTGTTTGCAAGATGTCTGTCATTTATAAGAGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCACTAGTGAGGGTCCTCTaGCAGGCTCTCATCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCALVRVL*QALIWV Trigger: GACCCAGATGAGAGCCTGGCAGAGGACCCTCACTAG...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCATGCCAGGCTCTCATCTaGGTCTTCAGATCAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCACQALI*VFRSER Trigger: TCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCA...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCATGTAAGCAGAATGAATaGCCTTGGCAGCATCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCACKQNE*PWQHPV Trigger: TACAGGATGCTGCCAAGGGCATTCATTCTGCTTACA...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCACTCAGGAACTGGGTTTaGGATTTCCTTGTAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCALRNWV*DFLVSR Trigger: TCTGCTTACAAGGAAATCCCAAACCCAGTTCCTGAG...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CAA 90 bp | CTGGGCGCCAGGACTCCCACTGCATCAAAACTGGCTTCACCTCAGTaGCATCCTTGCGGGGAATGGATGATGTCTCAGGAACTGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LGARTPTASKLASPQ*HPCGEWMMSQELGL Trigger: CAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGGGAGTCCTGGCGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCAATTAATTTACAGAACTaGGGAACAGAGAGTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCAINLQN*GTESGW Trigger: CCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAAT...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCATCAGTTAAATACCTATaGGTGGAAAGCCAACGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AHSSASGGSAEAAGARCASVKYL*VESQRK Trigger: TTTACGTTGGCTTTCCACTCATAGGTATTTAACTGA...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTCACATCCCACCTAAAGCCTATTATTCCAGCCAGCTCCCAGTAGAAGCAGAGGAAGGCAACATCTaGGCGCCAGGACTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: PFHIPPKAYYSSQLPVEAEEGNI*APGLPL Trigger: CAGTGGGAGTCCTGGCGCCCAGATGTTGCCTTCCTC...TGCTTCTACTGGGAGCTGGCTGGAATAATAGGCTTTAGGTGGGATGTGAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCACAGTCAAGAGTCTCCCCTGGGCTCACACTACCTATAGTCCATTTCAAAATGCCTCCTCCTTaGGCTATCCATTCTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: PEAQSRVSPGLTLPIVHFKMPPP*AIHSLP Trigger: GGGCAGAGAATGGATAGCCCAAGGAGGAGGCATTTT...GAAATGGACTATAGGTAGTGTGAGCCCAGGGGAGACTCTTGACTGTGCCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGAAAGAGTCCTCCTTCACGGCTGAGACTGACTTaGGAACATTCAGCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LCQALIWVFRSERKSPPSRLRLT*EHSAGW Trigger: CCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCG...TGAAGGAGGACTCTTTCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCACAGTCAAGAGTCTCCCCTGGGCTCACACTACCTATAGTCCATTTCCCACTGCATCAAAACTaGCTTCACCTCAGTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: PEAQSRVSPGLTLPIVHFPLHQN*LHLSCI Trigger: GATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGG...GAAATGGACTATAGGTAGTGTGAGCCCAGGGGAGACTCTTGACTGTGCCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CAA 90 bp | CAGTTGCATCCTTGCGGGGAATGGATGATGTCTCAGGAACTGGGTTaGGGATTTCCTTGTAAGCAGAATGAATGCCCTTGGCAGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: QLHPCGEWMMSQELG*GFPCKQNECPWQHP Trigger: AGGATGCTGCCAAGGGCATTCATTCTGCTTACAAGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCGCCAGGACTCCCACTaGATCAAAACTGGCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGRQDSH*IKTGFT Trigger: GGTGAAGCCAGTTTTGATGCAGTGGGAGTCCTGGCG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCGTAGAACAGGAAAAATaGCTCCTCCTTGGGCTATCC | + |
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Preference number: 2 (lower is better) Translates to: HGFSSLRVSRSVALSVLTVEQEK*LLLGLS Trigger: GGATAGCCCAAGGAGGAGGCATTTTTCCTGTTCTAC...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | AGTATTAATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTGCCCAGGAGGTTTGGGGCTTCCACTTaGGGGAGGATGGAGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SINLQNWGTESGWFVPRRFGAST*GRMEVC Trigger: ACAGACCTCCATCCTCCCCCAAGTGGAAGCCCCAAA...CCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCCTCATAAAAAGTGTTTaGGGCTTCCACTTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGFSSLRVSRSVALSVLTLIKSV*GFHLGE Trigger: CTCCCCCAAGTGGAAGCCCCAAACACTTTTTATGAG...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCCACTTGGGGGAGGATaGAGGTCTGTAAAGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGPLGGG*RSVKWS Trigger: ACTCCACTTTACAGACCTCCATCCTCCCCCAAGTGG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCTGGCTCAATAGTTTGTaGGATGTGTTTCTTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HGFSSLRVSRSVALSVLTWLNSL*DVFLWV Trigger: GACCCAAAGAAACACATCTCACAAACTATTGAGCCA...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTGGATCCCAGGAAAACTaGACACGAATTCATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGGSQEN*TRIHAG Trigger: GCCAGCATGAATTCGTGTCCAGTTTTCCTGGGATCC...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCTACTCTGCAAATAAGTaGTCAGCAAATAGAACATCA | + |
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Preference number: 2 (lower is better) Translates to: HGFSSLRVSRSVALSVLTYSANK*SANRTS Trigger: TGATGTTCTATTTGCTGAGCACTTATTTGCAGAGTA...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATTTTGCTGGTCCGGGTACTTCTCCAAGTTAAGAACAACTCAGAAATAACCATATGCCTGCTCAGATaGACTCCATCACTTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: PILLVRVLLQVKNNSEITICLLR*TPSLHS Trigger: AGAATGAAGTGATGGAGTTCATCTGAGCAGGCATAT...GGTTATTTCTGAGTTGTTCTTAACTTGGAGAAGTACCCGGACCAGCAAAATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACGATATGCCTGCTCAGATGAACTCCATCACTTCATTCTAGTATTGAGGCAGCATCCTGTAGAATaGTATAGTAACAGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: HRRYACSDELHHFILVLRQHPVE*YSNRNG Trigger: CCCATTCCTGTTACTATACCATTCTACAGGATGCTG...CCTCAATACTAGAATGAAGTGATGGAGTTCATCTGAGCAGGCATATCGTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTATAACCTTGAGAATTTaGATCCCAGGAAAACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGITLRI*IPGKLD Trigger: GTCCAGTTTTCCTGGGATCCAAATTCTCAAGGTTAT...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCCACCTGGGATGTTATaGTATGAATATATACGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGPPGML*YEYIRQ Trigger: TTGACGTATATATTCATATCATAACATCCCAGGTGG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCGCTTCAATATAATGTaGCATTTGAACAGTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGRFNIM*HLNSHS Trigger: AGAGTGACTGTTCAAATGTCACATTATATTGAAGCG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAAATAGAACATCAACATTAAGAAGAGCCTTGTGTTCCACAAATGCCAACCAGAATGAATGCCCTTaGCAGCATCCTGTAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: SANRTSTLRRALCSTNANQNECP*QHPVEW Trigger: CCATTCTACAGGATGCTGCCAAGGGCATTCATTCTG...GTTGGCATTTGTGGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTTGCAAATATAAGGCATaGGTTCACACTGAAAATATG | + |
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Preference number: 2 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGCKYKA*VHTENM Trigger: CATATTTTCAGTGTGAACCCATGCCTTATATTTGCA...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CAA 90 bp | TATTCACCTTATAGATATAGATCAGGTGGCTATTTCTATTTGAGTTaGCCGAGCCACCTGGGATGTTATGATATGAATATATACGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: YSPYRYRSGGYFYLS*PSHLGCYDMNIYVN Trigger: GTTGACGTATATATTCATATCATAACATCCCAGGTGGCTCGGCAAACTCAAATAGAAATAGCCACCTGATCTATATCTATAAGGTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 72 bp | GCAGCGGGACCTTTCGGGAGACACTGCTCACAGCAGTaGCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: AAGPFGRHCSQQ*LWGFSRSRRSQ Trigger: CTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGCAGTGTCTCCCGAAAGGTCCCGCTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 72 bp | GGACCTTTCGGGAGACACTGCTCACAGCAGTGCCTCTaGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: GPFGRHCSQQCL*GFSRSRRSQVC Trigger: GCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGCAGTGTCTCCCGAAAGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 72 bp | CTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTaGAGAACCCAGAGTAATAGACACAGGGGCCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LWGFSRSRRSQV*RTQSNRHRGQV Trigger: GACTTGGCCCCTGTGTCTATTACTCTGGGTTCTGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 72 bp | TGTGCCCAGGAGGTCAGGACACGGCTGAGACTGACTTaGGAACATTCAGCAGGCTGGTTCCACCAAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: CAQEVRTRLRLT*EHSAGWFHQSR Trigger: TCTGCTTTGGTGGAACCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCGTGTCCTGACCTCCTGGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR CCA 72 bp | ACAATCAGGCCAAGCTCCAGTTCTCAGAAAACCCAGTaGCAAGGCAGCGGGACCTTTCGGGAGACACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TIRPSSSSQKTQ*QGSGTFRETLL Trigger: GAGCAGTGTCTCCCGAAAGGTCCCGCTGCCTTGCCACTGGGTTTTCTGAGAACTGGAGCTTGGCCTGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| 3UTR GCA 72 bp | CCCCAGCAGGCTAAGCGGAGACAAGCATTCCTCCTCTaGAGAGGGGCTGACAGACCTGAAATTCAAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQQAKRRQAFLL*RGADRPEIQTQ Trigger: CTGAGTTTGAATTTCAGGTCTGTCAGCCCCTCTGCAGAGGAGGAATGCTTGTCTCCGCTTAGCCTGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | AACATCTGGGCGCCAGGACTCCCACTGCATCAAAACTaGCTTCACCTCAGTTGCATCCTTGCGGGGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: NIWAPGLPLHQN*LHLSCILAGNG Trigger: TCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGGGAGTCCTGGCGCCCAGATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCAAATAACCTTGAGAATTaGGATCCCAGGAAAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AHSSASGGSAEAAGARCANNLEN*DPRKTG Trigger: TCCAGTTTTCCTGGGATCCAAATTCTCAAGGTTATT...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | TTGAGGAAGGCAACATCTGGGCGCCAGGACTCCCACTaGATCAAAACTGGCTTCACCTCAGTTGCATCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRKATSGRQDSH*IKTGFTSVASL Trigger: CAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGGGAGTCCTGGCGCCCAGATGTTGCCTTCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | ATGGAATCAGTCCTGATAGGCATTAGCATCTCCAACTaGATGGATCCATGGAGGGCCCTGCAGGGCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MESVLIGISISN*MDPWRALQGLS Trigger: TGAGAGGCCCTGCAGGGCCCTCCATGGATCCATGCAGTTGGAGATGCTAATGCCTATCAGGACTGATTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | ATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTaGCCAGGAGGTCAGGACACGGCTGAGACTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: IYRTGEQRVVGL*PGGQDTAETDL Trigger: CAAGTCAGTCTCAGCCGTGTCCTGACCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCAGAGAGTGGTTGGTTaGTGCCCAGGAGGTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGQRVVG*CPGGQD Trigger: GTCCTGACCTCCTGGGCACAAACCAACCACTCTCTG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | TCCAAACCTGACCTCTTTCTTGGCCTGTTGGAATCCTaGAACTGTTCGCTCCAGCATCTTTCTGGGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKPDLFLGLLES*NCSLQHLSGTL Trigger: CAGAGTCCCAGAAAGATGCTGGAGCGAACAGTTGCAGGATTCCAACAGGCCAAGAAAGAGGTCAGGTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | TGGCTTCACCTCAGTTGCATCCTTGCGGGGAATGGATaGTGTCTCAGGAACTGGGTTTGGGATTTCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WLHLSCILAGNG*CLRNWVWDFLV Trigger: TACAAGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | AAGCAGAATGAATGCCCTTGGCAGCATCCTGTAGAATaGTATAGTAACAGGAATGGGGGTGGGATCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KQNECPWQHPVE*YSNRNGGGIWA Trigger: TGCCCAGATCCCACCCCCATTCCTGTTACTATACCATTCTACAGGATGCTGCCAAGGGCATTCATTCTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | AAACTGGCTTCACCTCAGTTGCATCCTTGCGGGGAATaGATGATGTCTCAGGAACTGGGTTTGGGATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLASPQLHPCGE*MMSQELGLGFP Trigger: AGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | ACACGGCTGAGACTGACTTGGGAACATTCAGCAGGCTaGTTCCACCAAAGCAGAAATGTCTGCTCTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRLRLTWEHSAG*FHQSRNVCSDF Trigger: AAAGTCAGAGCAGACATTTCTGCTTTGGTGGAACCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | CTGAGGCTGGGTACCCACAGAAGCACCCCTACGCTGTaGCTAAACTTAGCCCAGAGTGAAGAAGTATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: LRLGTHRSTPTL*LNLAQSEEVLI Trigger: AATTAATACTTCTTCACTCTGGGCTAAGTTTAGTCACAGCGTAGGGGTGCTTCTGTGGGTACCCAGCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | TGTGTGACTATGTGGTCTGAACCCTCCCTGAGGGAATaGGCCTCATCACAAATCCGTGGCTCATTTCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: CVTMWSEPSLRE*ASSQIRGSFLI Trigger: GATTAGAAATGAGCCACGGATTTGTGATGAGGCTCATTCCCTCAGGGAGGGTTCAGACCACATAGTCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | TGTGTGTTAGCAACTTCTCAACTAGTGAGGGTCCTCTaGCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVLATSQLVRVL*QALIWVFRSER Trigger: TCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAGGACCCTCACTAGTTGAGAAGTTGCTAACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGTAGAAGCACAGACGATATGCCTGCTCAGATGAACTCCATCACTTCATTCTCTCAGGAACTGGGTTaGGGATTTCCTTGTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSRSTDDMPAQMNSITSFSQELG*GFPCKQ Trigger: CTGCTTACAAGGAAATCCCAAACCCAGTTCCTGAGA...GAATGAAGTGATGGAGTTCATCTGAGCAGGCATATCGTCTGTGCTTCTACTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTATTAATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTGCCCAGGAGGAAAAATGCCTCCTCCTaGGGCTATCCATTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SINLQNWGTESGWFVPRRKNASS*GYPFSA Trigger: GGCAGAGAATGGATAGCCCAAGGAGGAGGCATTTTT...CCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTCGCAGGGAAGGGGGTTaGGAACATACAGTTAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGRREGG*EHTVSK Trigger: TTTGCTAACTGTATGTTCCAAACCCCCTTCCCTGCG...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCTCTGCTCTGACTTTCTaGAAGTTGCCTGGAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: HGFSSLRVSRSVALSVLTSALTF*KLPGKL Trigger: TAATTTTCCAGGCAACTTCAAGAAAGTCAGAGCAGA...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | TCTTTTCCTTTGTTCCCTCTGTGTGACTATGTGGTCTaGACCCTCCCTGAGGGAATGAGCCTCATCACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFPLFPLCDYVV*TLPEGMSLITN Trigger: ATTTGTGATGAGGCTCATTCCCTCAGGGAGGGTTCAGACCACATAGTCACACAGAGGGAACAAAGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | ACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATaGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TTDEYVAQRRVT*LGCESSEMSRV Trigger: TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| 3UTR CCA 72 bp | AATATGACTCCAAACCTGACCTCTTTCTTGGCCTGTTaGAATCCTGCAACTGTTCGCTCCAGCATCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NMTPNLTSFLAC*NPATVRSSIFL Trigger: CAGAAAGATGCTGGAGCGAACAGTTGCAGGATTCCAACAGGCCAAGAAAGAGGTCAGGTTTGGAGTCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | TTCAAACTCAGATTCCGGCTGTACCACTTGGGGCTTTaGGCCAGGCATTTCATTACACCCATAGTTCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: FKLRFRLYHLGL*ARHFITPIVHN Trigger: ATTGTGAACTATGGGTGTAATGAAATGCCTGGCTCAAAGCCCCAAGTGGTACAGCCGGAATCTGAGTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | AAATTCCTCCACTCACAACGTTTTGCAGAACTTGGCTaGCCACCAAAGGGAGTTCTTCATGCTTCTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KFLHSQRFAELG*PPKGVLHASFA Trigger: TGCAAAAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTTGTGAGTGGAGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | GCTAATAAGGAAGAAATTCCTCCACTCACAACGTTTTaGAGAACTTGGCTGCCCACCAAAGGGAGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ANKEEIPPLTTF*RTWLPTKGSSS Trigger: TGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTTGTGAGTGGAGGAATTTCTTCCTTATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | GAAGAAATTCCTCCACTCACAACGTTTTGCAGAACTTaGCTGCCCACCAAAGGGAGTTCTTCATGCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EEIPPLTTFCRT*LPTKGSSSCFF Trigger: AAAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTTGTGAGTGGAGGAATTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGAAAGAGTCCTCCTTCAGTAAAATTGAGCCTTTaGTCTATGGCAGGTTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LCQALIWVFRSERKSPPSVKLSL*SMAGCN Trigger: ATTACAACCTGCCATAGACAAAAGGCTCAATTTTAC...TGAAGGAGGACTCTTTCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | AAGCACCCCTACGCTGTGACTAAACTTAGCCCAGAGTaGAGAAGTATTAATTTACAGAACTGGGGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KHPYAVTKLSPE*RSINLQNWGTE Trigger: CTCTGTTCCCCAGTTCTGTAAATTAATACTTCTTCACTCTGGGCTAAGTTTAGTCACAGCGTAGGGGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | TTCTCTGCCCCCACCATGCTCTACTCTGCAAATAAGTaGTCAGCAAATAGAACATCAACATTAAGAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSAPTMLYSANK*SANRTSTLRRA Trigger: GGCTCTTCTTAATGTTGATGTTCTATTTGCTGAGCACTTATTTGCAGAGTAGAGCATGGTGGGGGCAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | CATTCAGCAGGCTGGTTCCACCAAAGCAGAAATGTCTaGTCTGACTTTCTTGAAGTTGCCTGGAAAATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSAGWFHQSRNV*SDFLEVAWKIN Trigger: GTTAATTTTCCAGGCAACTTCAAGAAAGTCAGAGCAGACATTTCTGCTTTGGTGGAACCAGCCTGCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | AGGGTGTTAAATGTCTCCATGGGGCATGCTTCCCTTTaGACTAAAGCTAAAGAGACATCAATACAGAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RVLNVSMGHASL*TKAKETSIQSN Trigger: GTTGCTCTGTATTGATGTCTCTTTAGCTTTAGTCCAAAGGGAAGCATGCCCCATGGAGACATTTAACACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | AAGGAGCTAGTTAAGAAAATGATGTGTAACAGGCATTaGAATGTAAGATCTCTGGAGCTGAGGGTGGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KELVKKMMCNRH*NVRSLELRVGL Trigger: CAACCCCACCCTCAGCTCCAGAGATCTTACATTTCAATGCCTGTTACACATCATTTTCTTAACTAGCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | CTGACTTTCTTGAAGTTGCCTGGAAAATTAACCCTATaGCTTGCTCAAGCAATCTCACGAACCAACTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LTFLKLPGKLTL*LAQAISRTNFA Trigger: GGCAAAGTTGGTTCGTGAGATTGCTTGAGCAAGTCATAGGGTTAATTTTCCAGGCAACTTCAAGAAAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | GAACCCCATCCCCATCATGCAACAGCAGAACATGTGTaGCTTAAACCATGGTTTCTATTACAGGGTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EPHPHHATAEHV*LKPWFLLQGVK Trigger: TTTAACACCCTGTAATAGAAACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | ATGCTTGAGTTTTTAAATGCACTTAATGACCACAGATaGGTATGTGGCTCAGAGACGGGTAACATGGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: MLEFLNALNDHR*VCGSETGNMVR Trigger: CCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAAGTGCATTTAAAAACTCAAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| 3UTR TCA 72 bp | GGGAAGCAGAACTACATTCTAAACCTGCATTTGGGCTaGGTACCGCTTCAATATAATGTGACATTTGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GKQNYILNLHLG*VPLQYNVTFEQ Trigger: CTGTTCAAATGTCACATTATATTGAAGCGGTACTCAGCCCAAATGCAGGTTTAGAATGTAGTTCTGCTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CCA 72 bp | AGCAGAAATGTCTGCTCTGACTTTCTTGAAGTTGCCTaGAAAATTAACCCTATGACTTGCTCAAGCAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRNVCSDFLEVA*KINPMTCSSNL Trigger: GAGATTGCTTGAGCAAGTCATAGGGTTAATTTTCCAGGCAACTTCAAGAAAGTCAGAGCAGACATTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | ACCTGCATTTGGGCTGAGTACCGCTTCAATATAATGTaGCATTTGAACAGTCACTCTTTGTACCTAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TCIWAEYRFNIM*HLNSHSLYLDH Trigger: ATGATCTAGGTACAAAGAGTGACTGTTCAAATGTCACATTATATTGAAGCGGTACTCAGCCCAAATGCAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | TTTCTATTTGAGTTTGCCGAGCCACCTGGGATGTTATaGTATGAATATATACGTCAACAATTTTCAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLFEFAEPPGML*YEYIRQQFSKG Trigger: GCCCTTTGAAAATTGTTGACGTATATATTCATATCATAACATCCCAGGTGGCTCGGCAAACTCAAATAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | ATAAATGACAGACATCTTGCAAACAACAGAAAAACGTaGGACATATGTGTGTTAGCAACTTCTCAACTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: INDRHLANNRKT*DICVLATSQLV Trigger: CACTAGTTGAGAAGTTGCTAACACACATATGTCGCACGTTTTTCTGTTGTTTGCAAGATGTCTGTCATTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR GCA 72 bp | GTTTGGAACATACAGTTAGCAAACTTCAAAGAGCTATaGAAATATAAGGCATGGGTTCACACTGAAAATATG | + |
|
Preference number: 3 (lower is better) Translates to: VWNIQLANFKEL*KYKAWVHTENM Trigger: CATATTTTCAGTGTGAACCCATGCCTTATATTTGCATAGCTCTTTGAAGTTTGCTAACTGTATGTTCCAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR TCA 72 bp | CAAAACCTTAAGCTGGCAGTAACCTACATCTTGGATTaGATTTCTTTTGTGGGTAAGTATACAGAAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QNLKLAVTYILD*ISFVGKYTEMF Trigger: AAACATTTCTGTATACTTACCCACAAAAGAAATTCAATCCAAGATGTAGGTTACTGCCAGCTTAAGGTTTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCATCAGCAGGGTGTTCATaGCCTTCCACTCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AHSSASGGSAEAAGARCASAGCS*PSTLCT Trigger: AGTACAGAGAGTGGAAGGTCATGAACACCCTGCTGA...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | GGCCTCTCAGCTCATCCCCAGGCTTCGTCTCGCCACTaGATGAGTCTGCTTCTCTCTCTCTGCTTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSAHPQASSRH*MSLLLSLCFSL Trigger: CAGAGAGAAGCAGAGAGAGAGAAGCAGACTCATCAAGTGGCGAGACGAAGCCTGGGGATGAGCTGAGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | TTGTGCCCAGGAGGTCAGGACACGGCTGAGACTGACTaGGGAACATTCAGCAGGCTGGTTCCACCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPGGQDTAETD*GTFSRLVPPKQ Trigger: CTGCTTTGGTGGAACCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCGTGTCCTGACCTCCTGGGCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGAGGTCAGGACACGGCTGAGACTGACTTGGGAACATTCAGCAGGCTGGTGCTGTTCAGGGTTCTaGTCTTGTGCAACTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AQEVRTRLRLTWEHSAGWCCSGF*SCATSR Trigger: ACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCA...CCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCGTGTCCTGACCTCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCACTTCTCGTTTATCGATaGGTTTTTGCATCGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSSASGGSAEAAGARCALLVYR*VFASLH Trigger: GTGAAGCGATGCAAAAACCCATCGATAAACGAGAAG...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | GCTCACAGCAGTGCCTCTGGGGGTTCAGCAGAAGCCGCAGGAGCCAGGTGTGCATCCATCTGCTTTCTCTaGCATTTGATTGCTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSSASGGSAEAAGARCASICFL*HLIAIP Trigger: TGGTATAGCAATCAAATGGCAGAGAAAGCAGATGGA...TGCACACCTGGCTCCTGCGGCTTCTGCTGAACCCCCAGAGGCACTGCTGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGAGGTCAGGACACGGCTGAGACTGACTTGGGAACATTCAGCAGGCTGGGCTTTCTCTGCCATTTaGTTGCTATACCAATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQEVRTRLRLTWEHSAGWAFSAI*LLYQYS Trigger: GCTGTATTGGTATAGCAATCAAATGGCAGAGAAAGC...CCAGCCTGCTGAATGTTCCCAAGTCAGTCTCAGCCGTGTCCTGACCTCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGCACAGTCAAGAGTCTCCCCTGGGCTCACACTACCTATAGTCCATTTCTTCAGGGTCCTGAGGTaGCTGCTGCTGATAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEAQSRVSPGLTLPIVHFFRVLR*LLLIDV Trigger: GACATCTATCAGCAGCAGGCACCTCAGGACCCTGAA...GAAATGGACTATAGGTAGTGTGAGCCCAGGGGAGACTCTTGACTGTGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGAAAGAGTCCTCCTTCACCCTGGCAGTCAGCGTaGCCCAGATCTTTACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQALIWVFRSERKSPPSPWQSA*PRSLQD Trigger: ATCCTGTAAAGATCTGGGCCACGCTGACTGCCAGGG...TGAAGGAGGACTCTTTCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCGCAATTGCTTGCTTCTaGGAAGGCAAGTGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGFSSLRVSRSVALSVLTAIACF*EGKCVD Trigger: GTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGC...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGCCATGGGTTCTAAAAGATTCGTGCTCAAAGATCCACCACCAGTGTCCCTGGGGCCTGGCAATTaGTTGCTTCTGAGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSAMGSKRFVLKDPPPVSLGPGN*LLLRRQ Trigger: TTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAG...GGACACTGGTGGTGGATCTTTGAGCACGAATCTTTTAGAACCCATGGCACTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | AGGACTCCCACTGCATCAAAACTGGCTTCACCTCAGTaGCATCCTTGCGGGGAATGGATGATGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPTASKLASPQ*HPCGEWMMSQE Trigger: TTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTGGGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCTTGTTTTCTGGGGCCTaGCAATTGCTTGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HGFSSLRVSRSVALSVLTLFSGA*QLLASE Trigger: CTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAA...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | CCTTGCGGGGAATGGATGATGTCTCAGGAACTGGGTTaGGGATTTCCTTGTAAGCAGAATGAATGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCGEWMMSQELG*GFPCKQNECPW Trigger: CCAAGGGCATTCATTCTGCTTACAAGGAAATCCCAAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | CACTGCATCAAAACTGGCTTCACCTCAGTTGCATCCTaGCGGGGAATGGATGATGTCTCAGGAACTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCIKTGFTSVAS*RGMDDVSGTGF Trigger: AAACCCAGTTCCTGAGACATCATCCATTCCCCGCAAGGATGCAACTGAGGTGAAGCCAGTTTTGATGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGTTCTCTCCGTTTAGGTaGAGAAGAAGATGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VAQRRVTWLGCESSEMSRFSPFR*RRRCPL Trigger: CAGTGGGCATCTTCTTCTTCACCTAAACGGAGAGAA...CCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTAGCAATTGCTTGCTTCTaGGAAGGCAAGTGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQRRVTWLGCESSEMSRVAIACF*EGKCVD Trigger: GTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGC...TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | AACGTTTTGCAGAACTTGGCTGCCCACCAAAGGGAGTTCTTCATGCTTCTTTTGTCTGTCTGCCATTCTTaGTCCAGCAGCTCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVLQNLAAHQREFFMLLLSVCHS*SSSSVW Trigger: CCAGACAGAGCTGCTGGATCAAGAATGGCAGACAGA...CAAAAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGTTGTTTTCTGGGGCCTaGCAATTGCTTGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQRRVTWLGCESSEMSRLFSGA*QLLASE Trigger: CTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAA...CCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| 3UTR CAA 72 bp | TTAGCCTATGGGGTGGTAGGACGCAGGGAAGGGGGTTaGGAACATACAGTTAGCAAACTTCAAAGAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LAYGVVGRREGG*EHTVSKLQRAM Trigger: CATAGCTCTTTGAAGTTTGCTAACTGTATGTTCCAAACCCCCTTCCCTGCGTCCTACCACCCCATAGGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | TTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATGGTTAGGATGTTCTGTCTGCCATTCTTaGTCCAGCAGCTCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMTTDEYVAQRRVTWLGCSVCHS*SSSSVW Trigger: CCAGACAGAGCTGCTGGATCAAGAATGGCAGACAGA...ACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCTCTGTCTGCCATTCTTaGTCCAGCAGCTCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFSVCHS*SSSSVW Trigger: CCAGACAGAGCTGCTGGATCAAGAATGGCAGACAGA...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCTGGGGCCTGGCAATTaGTTGCTTCTGAGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFLGPGN*LLLRRQ Trigger: TTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAG...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS-3UTR TCA 90 bp | CAGCACTTGGGAGATAGAAGCGGGCAGATCTCTGTGAATTCAAGGGTAGACTGGTTCCACTGTGAAATCTaGAAGGTTGACAAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QHLGDRSGQISVNSRVDWFHCEI*KVDKSI Trigger: GATGGATTTGTCAACCTTTCAGATTTCACAGTGGAA...CCAGTCTACCCTTGAATTCACAGAGATCTGCCCGCTTCTATCTCCCAAGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | AGTATTAATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTGCCCAGGAGGTTCTCTCCGTTTAGGTaGAGAAGAAGATGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SINLQNWGTESGWFVPRRFSPFR*RRRCPL Trigger: CAGTGGGCATCTTCTTCTTCACCTAAACGGAGAGAA...CCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | TTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATGGTTAGGATGTGCAATTGCTTGCTTCTaGGAAGGCAAGTGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMTTDEYVAQRRVTWLGCAIACF*EGKCVD Trigger: GTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGC...ACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGAGAAAACTGGCTGGGTaGCTTTACTGTATTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQRRVTWLGCESSEMSRRKLAG*LYCIFQ Trigger: CTGGAAAATACAGTAAAGGCACCCAGCCAGTTTTCT...CCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTACTGGGGCCTGGCAATTaGTTGCTTCTGAGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THENRNWKLHSIYTCQWLLGPGN*LLLRRQ Trigger: TTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAG...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACTTGGGAGATAGAAGCGGGCAGATCTCTGTGAATTCAAGGGTAGACTGGGAAGGCTTTGATCTGTaGGTGATTGATCTTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLGDRSGQISVNSRVDWEGFDL*VIDLKC Trigger: GCATTTAAGATCAATCACCCACAGATCAAAGCCTTC...CCAGTCTACCCTTGAATTCACAGAGATCTGCCCGCTTCTATCTCCCAAGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTAGAAGCACAGACGATATGCCTGCTCAGATGAACTCCATCACTTCATTCACTCTCTGTACTTCCTaGCTGTCAGCTTTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSTDDMPAQMNSITSFTLCTS*LSALDH Trigger: ATGATCCAAAGCTGACAGCCAGGAAGTACAGAGAGT...GAATGAAGTGATGGAGTTCATCTGAGCAGGCATATCGTCTGTGCTTCTACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | GGAAGAAATTCCTCCACTCACAACGTTTTGCAGAACTaGGCTGCCCACCAAAGGGAGTTCTTCATGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRNSSTHNVLQN*AAHQREFFMLL Trigger: AAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTTGTGAGTGGAGGAATTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGTGCCATGGGTTCTAAAAGATTCGTGCTCAAAGATCCACCACCAGTGTCCTTCCACTGTGAAATCTaGAAGGTTGACAAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSAMGSKRFVLKDPPPVSFHCEI*KVDKSI Trigger: GATGGATTTGTCAACCTTTCAGATTTCACAGTGGAA...GGACACTGGTGGTGGATCTTTGAGCACGAATCTTTTAGAACCCATGGCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTAATCTTCAGTAGCAGGTaGGCTGTTAACTATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQRRVTWLGCESSEMSRVIFSSR*AVNYVV Trigger: CACAACATAGTTAACAGCTCACCTGCTACTGAAGAT...TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGCCATGGGTTCTAAAAGATTCGTGCTCAAAGATCCACCACCAGTGTCCTCTCTGCCATTTGATTaGTATACCAATACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSAMGSKRFVLKDPPPVSSLPFD*YTNTAM Trigger: CATCGCTGTATTGGTATAGCAATCAAATGGCAGAGA...GGACACTGGTGGTGGATCTTTGAGCACGAATCTTTTAGAACCCATGGCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCGTTGACAAATCCATCTaGTTTCTCTGCCATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HGFSSLRVSRSVALSVLTVDKSI*FLCHLI Trigger: AATCAAATGGCAGAGAAAGCAGATGGATTTGTCAAC...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| CDS-3UTR GCA 90 bp | GTGGCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGCTGCAAATTCTCTGCTaGAAAGTAGAAGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAQRRVTWLGCESSEMSRLQILC*KVEGFD Trigger: ATCAAAGCCTTCTACTTTGCAGCAGAGAATTTGCAG...CCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGCTGTTAACTATGTTGTaGCAGGACTGTCGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAQRRVTWLGCESSEMSRLLTML*QDCRSL Trigger: TAAAGAACGACAGTCCTGGCACAACATAGTTAACAG...CCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGCCATGGGTTCTAAAAGATTCGTGCTCAAAGATCCACCACCAGTGTCCCTGTTAACTATGTTGTaGCAGGACTGTCGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSAMGSKRFVLKDPPPVSLLTML*QDCRSL Trigger: TAAAGAACGACAGTCCTGGCACAACATAGTTAACAG...GGACACTGGTGGTGGATCTTTGAGCACGAATCTTTTAGAACCCATGGCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCCCAAATCGTGTTCTTTaGACTTTAATGTGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGFSSLRVSRSVALSVLTPNRVL*TLMCCS Trigger: TGAACAGCACATTAAAGTGCAAAGAACACGATTTGG...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCTCCATCTGCTTTCTCTaGATTGCCTTCTGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFSICFL*IAFCGH Trigger: ATGGCCACAGAAGGCAATGCAGAGAAAGCAGATGGA...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| 3UTR CAA 72 bp | AAATATGACTCCAAACCTGACCTCTTTCTTGGCCTGTaGGAATCCTGCAACTGTTCGCTCCAGCATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYDSKPDLFLGL*ESCNCSLQHLS Trigger: AGAAAGATGCTGGAGCGAACAGTTGCAGGATTCCAACAGGCCAAGAAAGAGGTCAGGTTTGGAGTCATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTAAGAAGAGAAAGAACATaGTGTTTCTCTCCGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQRRVTWLGCESSEMSRVRRERT*CFSPFR Trigger: CCTAAACGGAGAGAAACATCATGTTCTTTCTCTTCT...TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | AGTATTAATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTGCCCAGGAGGGCTAGCCTGCTCCAGTaGTTTGTACAATTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SINLQNWGTESGWFVPRRASLLQ*FVQFFH Trigger: ATGGAAAAATTGTACAAATCACTGGAGCAGGCTAGC...CCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | TTGAACCCCATCCCCATCATGCAACAGCAGAACATGTGTGACTTAAACCATGGTAGAAAACTGGCTGGGTaGCTTTACTGTATTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPIPIMQQQNMCDLNHGRKLAG*LYCIFQ Trigger: CTGGAAAATACAGTAAAGGCACCCAGCCAGTTTTCT...ACCATGGTTTAAGTCACACATGTTCTGCTGTTGCATGATGGGGATGGGGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAATAGAACATCAACATTAAGAAGAGCCTTGTGTTCCACAAATGCCAACCCTGGCTGTCAGCTTTaGATCATCCAGCAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SANRTSTLRRALCSTNANPGCQL*IIQQLV Trigger: AACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGG...GTTGGCATTTGTGGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATTTCTCTCCGTTTAGGTaGAGAAGAAGATGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EMSRVTHENRNWKLHSIYFSPFR*RRRCPL Trigger: CAGTGGGCATCTTCTTCTTCACCTAAACGGAGAGAA...ATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCAGAAAACTGGCTGGGTaGCTTTACTGTATTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFRKLAG*LYCIFQ Trigger: CTGGAAAATACAGTAAAGGCACCCAGCCAGTTTTCT...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATTCCATCTGCTTTCTCTaGATTGCCTTCTGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMSRVTHENRNWKLHSIYSICFL*IAFCGH Trigger: ATGGCCACAGAAGGCAATGCAGAGAAAGCAGATGGA...ATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| 3UTR CAA 72 bp | TGCTCAGCAAATAGAACATCAACATTAAGAAGAGCCTaGTGTTCCACAAATGCCAACATGCGTCCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSANRTSTLRRA*CSTNANMRPVP Trigger: TGGAACTGGACGCATGTTGGCATTTGTGGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | TTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATGGTTAGGATGTAGAAGAGAAAGAACATaGTGTTTCTCTCCGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMTTDEYVAQRRVTWLGCRRERT*CFSPFR Trigger: CCTAAACGGAGAGAAACATCATGTTCTTTCTCTTCT...ACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTAATCTTCAGTAGCAGGTaGGCTGTTAACTATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: THENRNWKLHSIYTCQWLIFSSR*AVNYVV Trigger: CACAACATAGTTAACAGCTCACCTGCTACTGAAGAT...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTTTGCTGGTCCGGGTACTTCTCCAAGTTAAGAACAACTCAGAAATAACCCTGCAAATTCTCTGCTaGAAAGTAGAAGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PILLVRVLLQVKNNSEITLQILC*KVEGFD Trigger: ATCAAAGCCTTCTACTTTGCAGCAGAGAATTTGCAG...GGTTATTTCTGAGTTGTTCTTAACTTGGAGAAGTACCCGGACCAGCAAAATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATGGTTAGGATGTCTGTTAACTATGTTGTaGCAGGACTGTCGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LMTTDEYVAQRRVTWLGCLLTML*QDCRSL Trigger: TAAAGAACGACAGTCCTGGCACAACATAGTTAACAG...ACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTTTGCTGGTCCGGGTACTTCTCCAAGTTAAGAACAACTCAGAAATAACCGAAGGCTTTGATCTGTaGGTGATTGATCTTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PILLVRVLLQVKNNSEITEGFDL*VIDLKC Trigger: GCATTTAAGATCAATCACCCACAGATCAAAGCCTTC...GGTTATTTCTGAGTTGTTCTTAACTTGGAGAAGTACCCGGACCAGCAAAATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTATTCCACTGTGAAATCTaGAAGGTTGACAAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: THENRNWKLHSIYTCQWLFHCEI*KVDKSI Trigger: GATGGATTTGTCAACCTTTCAGATTTCACAGTGGAA...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CCA 90 bp | AGTATTAATTTACAGAACTGGGGAACAGAGAGTGGTTGGTTTGTGCCCAGGAGGTCTGGGACTGTTAGATaGTCTTTATTGTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SINLQNWGTESGWFVPRRSGTVR*SLLLFS Trigger: ACTGAATAACAATAAAGACCATCTAACAGTCCCAGA...CCTCCTGGGCACAAACCAACCACTCTCTGTTCCCCAGTTCTGTAAATTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAATAGAACATCAACATTAAGAAGAGCCTTGTGTTCCACAAATGCCAACATCTTCAGTAGCAGGTaGGCTGTTAACTATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SANRTSTLRRALCSTNANIFSSR*AVNYVV Trigger: CACAACATAGTTAACAGCTCACCTGCTACTGAAGAT...GTTGGCATTTGTGGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCTCTGGGACTGTTAGATaGTCTTTATTGTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFSGTVR*SLLLFS Trigger: ACTGAATAACAATAAAGACCATCTAACAGTCCCAGA...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGACCACAGATGAGTATGTGGCTCAGAGACGGGTAACATGGTTAGGATGTTCTGGGACTGTTAGATaGTCTTTATTGTTATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMTTDEYVAQRRVTWLGCSGTVR*SLLLFS Trigger: ACTGAATAACAATAAAGACCATCTAACAGTCCCAGA...ACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTCATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATGCTTTGATCTGTGGGTaGTTGATCTTAAATGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EMSRVTHENRNWKLHSIYALICG*LILNAF Trigger: AAATGCATTTAAGATCAATCACCCACAGATCAAAGC...ATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAATAGAACATCAACATTAAGAAGAGCCTTGTGTTCCACAAATGCCAACAGAAGAGAAAGAACATaGTGTTTCTCTCCGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SANRTSTLRRALCSTNANRRERT*CFSPFR Trigger: CCTAAACGGAGAGAAACATCATGTTCTTTCTCTTCT...GTTGGCATTTGTGGAACACAAGGCTCTTCTTAATGTTGATGTTCTATTTGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| 3UTR CAA 72 bp | TATAGATATAGATCAGGTGGCTATTTCTATTTGAGTTaGCCGAGCCACCTGGGATGTTATGATATGAATATA | + |
|
Preference number: 4 (lower is better) Translates to: YRYRSGGYFYLS*PSHLGCYDMNI Trigger: TATATTCATATCATAACATCCCAGGTGGCTCGGCAAACTCAAATAGAAATAGCCACCTGATCTATATCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS CCA 90 bp | CTGTGCAGCCACAGGAGAGGAAGTTGTGGAAGCATACGGAGGGGGTaGTGCCTCCACGGCAACTTCAGGATCTTCCTGCTCGCTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LCSHRRGSCGSIRRG*CLHGNFRIFLLALT Trigger: AGTGAGAGCGAGCAGGAAGATCCTGAAGTTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGCTGCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS CCA 90 bp | AACACGTACCACAGGAGAGGAAGTTGTGGAAGCATACGGAGGGGGTaGTGCCTCCACGGCAACTTCAGGATCTTCCTGCTCGCTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: NTYHRRGSCGSIRRG*CLHGNFRIFLLALT Trigger: AGTGAGAGCGAGCAGGAAGATCCTGAAGTTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGTACGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078070.10 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCAGGCTCTCATCTGGGTCTTCAGATCAGAAAGAAAGAGTCCTCCTTCACCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCQALIWVFRSERKSPPSPQERK*WKHTEG Trigger: CCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGG...TGAAGGAGGACTCTTTCTTTCTGATCTGAAGACCCAGATGAGAGCCTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACTTGGGAGATAGAAGCGGGCAGATCTCTGTGAATTCAAGGGTAGACTGGTCTGGGGCCTGGCAATaGCTTGCTTCTGAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHLGDRSGQISVNSRVDWSGAWQ*LASEKA Trigger: TGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGA...CCAGTCTACCCTTGAATTCACAGAGATCTGCCCGCTTCTATCTCCCAAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CAA 90 bp | CATGGTTTCTCTTCACTGAGGGTCTCTAGAAGTGTCGCTCTCTCTGTCCTCACCTCCTGGCTGTCAGCTTaGGATCATCCAGCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGFSSLRVSRSVALSVLTSWLSA*DHPAAG Trigger: ACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGA...GGTGAGGACAGAGAGAGCGACACTTCTAGAGACCCTCAGTGAAGAGAAACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS TCA 90 bp | GAGGTGCCTGCTGCTGATAGATGTCCTGGATCAGCAGGGTGTTCATaGCCTTCCACTCTCTGTACTTCCTGGCTGTCAGCTTTGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: EVPAADRCPGSAGCS*PSTLCTSWLSALDH Trigger: ATGATCCAAAGCTGACAGCCAGGAAGTACAGAGAGTGGAAGGTCATGAACACCCTGCTGATCCAGGACATCTATCAGCAGCAGGCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTAGGGCCTGGCAATTGCTaGCTTCTGAGAAGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AQRRVTWLGCESSEMSRVGPGNC*LLRRQV Trigger: CACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCC...TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCACATCCCACCTAAAGCCTATTATTCCAGCCAGCTCCCAGTAGAAGCAGGGCCTGGCAATTGCTaGCTTCTGAGAAGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFHIPPKAYYSSQLPVEAGPGNC*LLRRQV Trigger: CACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCC...TGCTTCTACTGGGAGCTGGCTGGAATAATAGGCTTTAGGTGGGATGTGAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | AACGTTTTGCAGAACTTGGCTGCCCACCAAAGGGAGTTCTTCATGCTTCTTTTGTCTGGGGCCTGGCAATaGCTTGCTTCTGAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NVLQNLAAHQREFFMLLLSGAWQ*LASEKA Trigger: TGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGA...CAAAAGAAGCATGAAGAACTCCCTTTGGTGGGCAGCCAAGTTCTGCAAAACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCACATCCCACCTAAAGCCTATTATTCCAGCCAGCTCCCAGTAGAAGCACTCTGTCTGCCATTCTaGATCCAGCAGCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFHIPPKAYYSSQLPVEALCLPF*IQQLCL Trigger: CAGACAGAGCTGCTGGATCAAGAATGGCAGACAGAG...TGCTTCTACTGGGAGCTGGCTGGAATAATAGGCTTTAGGTGGGATGTGAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAGACGGGTAACATGGTTAGGATGTGAAAGCTCAGAAATGAGCAGGGTACTCTGTCTGCCATTCTaGATCCAGCAGCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQRRVTWLGCESSEMSRVLCLPF*IQQLCL Trigger: CAGACAGAGCTGCTGGATCAAGAATGGCAGACAGAG...TACCCTGCTCATTTCTGAGCTTTCACATCCTAACCATGTTACCCGTCTCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS CCA 90 bp | TTCAACAAACCACCTTCTGATGTGATGCAGTTGTTTTCTGGGGCCTaGCAATTGCTTGCTTCTGAGAAGGCAAGTGTGTGGACCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FNKPPSDVMQLFSGA*QLLASEKASVWTCS Trigger: TGAGCAGGTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAACTGCATCACATCAGAAGGTGGTTTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000170680.8 |
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| CDS-3UTR CAA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTACCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: THENRNWKLHSIYTCQWLPQERK*WKHTEG Trigger: CCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGG...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS-3UTR CAA 90 bp | CCATTTCACATCCCACCTAAAGCCTATTATTCCAGCCAGCTCCCAGTAGAAGCATCTGATGTGATGCAGTaGTTTTCTGGGGCCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PFHIPPKAYYSSQLPVEASDVMQ*FSGAWQ Trigger: TTGCCAGGCCCCAGAAAACAACTGCATCACATCAGA...TGCTTCTACTGGGAGCTGGCTGGAATAATAGGCTTTAGGTGGGATGTGAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
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| CDS CCA 90 bp | GGTGTTCATGACCTTCCACTCTCTGTACTTCCTGGCTGTCAGCTTTaGATCATCCAGCAGCTGGTTGATCATAGCCAAATCGTGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVHDLPLSVLPGCQL*IIQQLVDHSQIVFF Trigger: AAAGAACACGATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAAGTACAGAGAGTGGAAGGTCATGAACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS-3UTR CAA 90 bp | GAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATCCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMSRVTHENRNWKLHSIYPQERK*WKHTEG Trigger: CCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGG...ATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS-3UTR CAA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTATCTGGGGCCTGGCAATaGCTTGCTTCTGAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: THENRNWKLHSIYTCQWLSGAWQ*LASEKA Trigger: TGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGA...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS-3UTR CAA 90 bp | AAGCTCAGAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCTCTGTCTGCCATTCTaGATCCAGCAGCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLRNEQGNTRKQKLEAPFLCLPF*IQQLCL Trigger: CAGACAGAGCTGCTGGATCAAGAATGGCAGACAGAG...GAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTCTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS CCA 90 bp | CACTCTCTGTACTTCCTGGCTGTCAGCTTTGGATCATCCAGCAGCTaGTTGATCATAGCCAAATCGTGTTCTTTGCACTTTAATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSLYFLAVSFGSSSS*LIIAKSCSLHFNVL Trigger: CAGCACATTAAAGTGCAAAGAACACGATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAAGTACAGAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS-3UTR CAA 90 bp | ACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATACATGCCAGTGGCTATCTGATGTGATGCAGTaGTTTTCTGGGGCCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: THENRNWKLHSIYTCQWLSDVMQ*FSGAWQ Trigger: TTGCCAGGCCCCAGAAAACAACTGCATCACATCAGA...TAGCCACTGGCATGTATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
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| CDS-3UTR CAA 90 bp | GAAATGAGCAGGGTAACACACGAAAACAGAAACTGGAAGCTCCATTCCATTTATTCTGATGTGATGCAGTaGTTTTCTGGGGCCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EMSRVTHENRNWKLHSIYSDVMQ*FSGAWQ Trigger: TTGCCAGGCCCCAGAAAACAACTGCATCACATCAGA...ATAAATGGAATGGAGCTTCCAGTTTCTGTTTTCGTGTGTTACCCTGCTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086896.10 ENSMUST00000170680.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCACATCCCACCTAAAGCCTATTATTCCAGCCAGCTCCCAGTAGAAGCATTTATCGATGGGTTTTaGCATCGCTTCACAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PFHIPPKAYYSSQLPVEAFIDGF*HRFTKD Trigger: GTCTTTTGTGAAGCGATGCAAAAACCCATCGATAAA...TGCTTCTACTGGGAGCTGGCTGGAATAATAGGCTTTAGGTGGGATGTGAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS CCA 90 bp | TGTGCTGTTCAGGGTTCTGATCTTGTGCAACTTCTCGTTTATCGATaGGTTTTTGCATCGCTTCACAAAAGACTTTCTCAGCTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CAVQGSDLVQLLVYR*VFASLHKRLSQLLL Trigger: AAGAAGGAGCTGAGAAAGTCTTTTGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTTTGCTGGTCCGGGTACTTCTCCAAGTTAAGAACAACTCAGAAATAACCGCCTGCTCCAGTGATTaGTACAATTTTTCCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PILLVRVLLQVKNNSEITACSSD*YNFSIS Trigger: TGAGATGGAAAAATTGTACAAATCACTGGAGCAGGC...GGTTATTTCTGAGTTGTTCTTAACTTGGAGAAGTACCCGGACCAGCAAAATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105617.8 |
||
| CDS GCA 90 bp | TCGTGTTCTTTGCACTTTAATGTGCTGTTCAGGGTTCTGATCTTGTaGAACTTCTCGTTTATCGATGGGTTTTTGCATCGCTTCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCSLHFNVLFRVLIL*NFSFIDGFLHRFTK Trigger: TTTTGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACATTAAAGTGCAAAGAACACGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
||
| CDS CAA 72 bp | AAGAAGATGCCCACTGTGCAGCCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGGGTGGTGCCTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: KKMPTVQPQERK*WKHTEGVVPPR Trigger: CCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGCTGCACAGTGGGCATCTTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS GCA 72 bp | AGGAGAGGAAGTTGTGGAAGCATACGGAGGGGGTGGTaGCTCCACGGCAACTTCAGGATCTTCCTGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGSCGSIRRGW*LHGNFRIFLLA Trigger: AGCGAGCAGGAAGATCCTGAAGTTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS CCA 72 bp | CACAGGAGAGGAAGTTGTGGAAGCATACGGAGGGGGTaGTGCCTCCACGGCAACTTCAGGATCTTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HRRGSCGSIRRG*CLHGNFRIFLL Trigger: GAGCAGGAAGATCCTGAAGTTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS CCA 72 bp | GTGCAGCATCAACACGTACCACAGGAGAGGAAGTTGTaGAAGCATACGGAGGGGGTGGTGCCTCCACGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VQHQHVPQERKL*KHTEGVVPPRQ Trigger: TTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGTACGTGTTGATGCTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078070.10 |
||
| CDS CAA 72 bp | ACTGTGCAGCATCAACACGTACCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGGGTGGTGCCTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: TVQHQHVPQERK*WKHTEGVVPPR Trigger: CCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGTACGTGTTGATGCTGCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078070.10 |
||
| CDS CAA 90 bp | AAGATGCCCACTGTGCAGCATCAACACGTACCACAGGAGAGGAAGTaGTGGAAGCATACGGAGGGGGTGGTGCCTCCACGGCAACTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KMPTVQHQHVPQERK*WKHTEGVVPPRQLQ Trigger: CTGAAGTTGCCGTGGAGGCACCACCCCCTCCGTATGCTTCCACAACTTCCTCTCCTGTGGTACGTGTTGATGCTGCACAGTGGGCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078070.10 |
||
| CDS CCA 72 bp | GCCTGGCAATTGCTTGCTTCTGAGAAGGCAAGTGTGTaGACCTGCTCAGCAAATGTGAGGGGAAGCCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AWQLLASEKASV*TCSANVRGSPA Trigger: TGCGGGGCTTCCCCTCACATTTGCTGAGCAGGTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS TCA 72 bp | GCTGCTGATAGATGTCCTGGATCAGCAGGGTGTTCATaGCCTTCCACTCTCTGTACTTCCTGGCTGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AADRCPGSAGCS*PSTLCTSWLSA Trigger: AGCTGACAGCCAGGAAGTACAGAGAGTGGAAGGTCATGAACACCCTGCTGATCCAGGACATCTATCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
||
| CDS TCA 72 bp | GCAGTTGTTTTCTGGGGCCTGGCAATTGCTTGCTTCTaGGAAGGCAAGTGTGTGGACCTGCTCAGCAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: AVVFWGLAIACF*EGKCVDLLSKC Trigger: ACATTTGCTGAGCAGGTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
||
| CDS CCA 72 bp | TCCTTTTTCTTGTACAGCCAACCCTGGCAGTCAGCGTaGCCCAGATCTTTACAGGATATCCTTCTCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SFFLYSQPWQSA*PRSLQDILLRL Trigger: GAGTCGGAGAAGGATATCCTGTAAAGATCTGGGCCACGCTGACTGCCAGGGTTGGCTGTACAAGAAAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000151960.2 |
||
| CDS CCA 72 bp | CCACCTTCTGATGTGATGCAGTTGTTTTCTGGGGCCTaGCAATTGCTTGCTTCTGAGAAGGCAAGTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PPSDVMQLFSGA*QLLASEKASVW Trigger: CCACACACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAACTGCATCACATCAGAAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000170680.8 |
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| CDS CCA 72 bp | GACCTTCCACTCTCTGTACTTCCTGGCTGTCAGCTTTaGATCATCCAGCAGCTGGTTGATCATAGCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: DLPLSVLPGCQL*IIQQLVDHSQI Trigger: GATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAAGTACAGAGAGTGGAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 72 bp | CCCGCATCTTCAGTAGCAGGTGAGCTGTTAACTATGTaGTGCCAGGACTGTCGTTCTTTAGATCCCGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PASSVAGELLTM*CQDCRSLDPEE Trigger: TTCCTCGGGATCTAAAGAACGACAGTCCTGGCACAACATAGTTAACAGCTCACCTGCTACTGAAGATGCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
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| CDS CAA 90 bp | AAACCACCTTCTGATGTGATGCAGTTGTTTTCTGGGGCCTGGCAATaGCTTGCTTCTGAGAAGGCAAGTGTGTGGACCTGCTCAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KPPSDVMQLFSGAWQ*LASEKASVWTCSAN Trigger: ATTTGCTGAGCAGGTCCACACACTTGCCTTCTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAACTGCATCACATCAGAAGGTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000170680.8 |
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| CDS GCA 72 bp | GCATCTTCAGTAGCAGGTGAGCTGTTAACTATGTTGTaGCAGGACTGTCGTTCTTTAGATCCCGAGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ASSVAGELLTML*QDCRSLDPEEE Trigger: TTCTTCCTCGGGATCTAAAGAACGACAGTCCTGGCACAACATAGTTAACAGCTCACCTGCTACTGAAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
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| CDS CAA 90 bp | TCTCTGTACTTCCTGGCTGTCAGCTTTGGATCATCCAGCAGCTGGTaGATCATAGCCAAATCGTGTTCTTTGCACTTTAATGTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SLYFLAVSFGSSSSW*IIAKSCSLHFNVLF Trigger: GAACAGCACATTAAAGTGCAAAGAACACGATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAAGTACAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CCA 72 bp | TACTTCCTGGCTGTCAGCTTTGGATCATCCAGCAGCTaGTTGATCATAGCCAAATCGTGTTCTTTGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: YFLAVSFGSSSS*LIIAKSCSLHF Trigger: AAAGTGCAAAGAACACGATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 72 bp | AACAAGTTCAACAAACCACCTTCTGATGTGATGCAGTaGTTTTCTGGGGCCTGGCAATTGCTTGCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: NKFNKPPSDVMQ*FSGAWQLLASE Trigger: CTCAGAAGCAAGCAATTGCCAGGCCCCAGAAAACAACTGCATCACATCAGAAGGTGGTTTGTTGAACTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000170680.8 |
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| CDS CAA 72 bp | TTCCTGGCTGTCAGCTTTGGATCATCCAGCAGCTGGTaGATCATAGCCAAATCGTGTTCTTTGCACTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: FLAVSFGSSSSW*IIAKSCSLHFN Trigger: ATTAAAGTGCAAAGAACACGATTTGGCTATGATCAACCAGCTGCTGGATGATCCAAAGCTGACAGCCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS GCA 72 bp | TTGCACTTTAATGTGCTGTTCAGGGTTCTGATCTTGTaGAACTTCTCGTTTATCGATGGGTTTTTGCATCGC | + |
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Preference number: 6 (lower is better) Translates to: LHFNVLFRVLIL*NFSFIDGFLHR Trigger: GCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACATTAAAGTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CCA 72 bp | CAGGGTTCTGATCTTGTGCAACTTCTCGTTTATCGATaGGTTTTTGCATCGCTTCACAAAAGACTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QGSDLVQLLVYR*VFASLHKRLSQ Trigger: CTGAGAAAGTCTTTTGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 72 bp | CTGATCTTGTGCAACTTCTCGTTTATCGATGGGTTTTaGCATCGCTTCACAAAAGACTTTCTCAGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LILCNFSFIDGF*HRFTKDFLSSF Trigger: GAAGGAGCTGAGAAAGTCTTTTGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 90 bp | TTCAGGGTTCTGATCTTGTGCAACTTCTCGTTTATCGATGGGTTTTaGCATCGCTTCACAAAAGACTTTCTCAGCTCCTTCTTGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FRVLILCNFSFIDGF*HRFTKDFLSSFLVE Trigger: TTCAACCAAGAAGGAGCTGAGAAAGTCTTTTGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS TCA 72 bp | CGTGTTCTTTGCACTTTAATGTGCTGTTCAGGGTTCTaGTCTTGTGCAACTTCTCGTTTATCGATGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RVLCTLMCCSGF*SCATSRLSMGF Trigger: AAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACATTAAAGTGCAAAGAACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 72 bp | GTGATGGATTCCTGGTGGGTCACAGCAAATCCAAGTTaGTTTAACCACACATTCATTTCCTGCAAATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VMDSWWVTANPS*FNHTFISCKFS Trigger: AGAGAATTTGCAGGAAATGAATGTGTGGTTAAACAAACTTGGATTTGCTGTGACCCACCAGGAATCCATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000145156.8 ENSMUST00000170680.8 |
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| CDS CAA 90 bp | AAATCGTGTTCTTTGCACTTTAATGTGCTGTTCAGGGTTCTGATCTaGTGCAACTTCTCGTTTATCGATGGGTTTTTGCATCGCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: KSCSLHFNVLFRVLI*CNFSFIDGFLHRFT Trigger: TGTGAAGCGATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACATTAAAGTGCAAAGAACACGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 90 bp | ATTCTTGATCCAGCAGCTCTGTCTGGGACTGTTAGATGGTCTTTATaGTTATTCAGTGAAGAAGTGTCATCACTAGACAACAAGTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ILDPAALSGTVRWSL*LFSEEVSSLDNKFN Trigger: GTTGAACTTGTTGTCTAGTGATGACACTTCTTCACTGAATAACAATAAAGACCATCTAACAGTCCCAGACAGAGCTGCTGGATCAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078070.10 ENSMUST00000086896.10 ENSMUST00000105617.8 ENSMUST00000170680.8 |
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| CDS CAA 90 bp | TCTCATCATCTTCAGATGATTTTATTTCTTCTCTGTCTGCCATTCTaGATCCAGCAGCTCTGTCTGGGACTGTTAGATGGTCTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: SHHLQMILFLLCLPF*IQQLCLGLLDGLYC Trigger: ACAATAAAGACCATCTAACAGTCCCAGACAGAGCTGCTGGATCAAGAATGGCAGACAGAGAAGAAATAAAATCATCTGAAGATGATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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| CDS CAA 72 bp | TCTTTGCACTTTAATGTGCTGTTCAGGGTTCTGATCTaGTGCAACTTCTCGTTTATCGATGGGTTTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLHFNVLFRVLI*CNFSFIDGFLH Trigger: ATGCAAAAACCCATCGATAAACGAGAAGTTGCACAAGATCAGAACCCTGAACAGCACATTAAAGTGCAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078070.10 ENSMUST00000105617.8 |
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