Pregenerated sensors for IP6K3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024210Ensembl transcript IDs: ENSMUST00000025046.4
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACTGTGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTaGGGTTCCAGGTCAGGGACATCACGTGGTCACAGTGTGGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: TLWAPLWVHSASSGS*GSRSGTSRGHSVEN Trigger: GTTTTCCACACTGTGACCACGTGATGTCCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CCA 90 bp | ATAAATAGAAATGGAGAATACAGCCCAACACTGTGGGCTCCTCTGTaGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: INRNGEYSPTLWAPL*VHSASSGSCGSRSG Trigger: CCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACAGTGTTGGGCTGTATTCTCCATTTCTATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR GCA 90 bp | AGCATAGCGCAGCGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATaGTGCAGAAGAAGGAATTCATTAGACCTGTTTGCTCTGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: SIAQRWAPGHCSKLQ*CRRRNSLDLFALVS Trigger: AGAAACCAGAGCAAACAGGTCTAATGAATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCGCTGCGCTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR GCA 90 bp | ATAGCGCAGCGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTaGAGAAGAAGGAATTCATTAGACCTGTTTGCTCTGGTTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: IAQRWAPGHCSKLQC*RRRNSLDLFALVSH Trigger: ATGAGAAACCAGAGCAAACAGGTCTAATGAATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCGCTGCGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CCA 90 bp | CAGATTTCTGTAGCAATTGTCAACACCGCCCGCCACATGCAGAGATaGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCTACAGGG | + |
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Preference number: 1 (lower is better) Translates to: QISVAIVNTARHMQR*LLKVDMVITKTPTG Trigger: CCCTGTAGGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCTACAGAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCTAGCTTGGGTCCCTTaGCAAAATTCTGCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CGLLCGYTLLPLEAAVPGLAWVP*QNSAAQ Trigger: CTGGGCTGCAGAATTTTGCCAAGGGACCCAAGCTAG...ACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGCCCTTGGCAAAATTCTaGAGCCCAGAGAAAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: APLWVHSASSGSCGSRSGPLAKF*SPEKNP Trigger: GGGATTTTTCTCTGGGCTGCAGAATTTTGCCAAGGG...CCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR GCA 90 bp | AGGCATCAGCTCTGTCTACCTGGGGAGGGGCTGATCCACACAAGCAGAATATTCACCCCATTTTGTAACTaGACTGTGCAAGCTGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: RHQLCLPGEGLIHTSRIFTPFCN*TVQAAR Trigger: CCGGGCAGCTTGCACAGTGCAGTTACAAAATGGGGT...GAATATTCTGCTTGTGTGGATCAGCCCCTCCCCAGGTAGACAGAGCTGATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR GCA 90 bp | GCATCAGCTCTGTCTACCTGGGGAGGGGCTGATCCACACAAGCAGAATATTCTTAGAAGCAGTCTGGAATaGAGGCACCCTGCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: ASALSTWGGADPHKQNILRSSLE*RHPAAP Trigger: TGGTGCTGCAGGGTGCCTGCATTCCAGACTGCTTCT...AAGAATATTCTGCTTGTGTGGATCAGCCCCTCCCCAGGTAGACAGAGCTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCATCAGCTCTGTCTACCTGGGGAGGGGCTGATCCACACAAGCAGAATATTCTTGAAGACCATGGCCTaGCAACAGAGAAGCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RHQLCLPGEGLIHTSRIFLKTMA*QQRSSL Trigger: CAGACTGCTTCTCTGTTGTCAGGCCATGGTCTTCAA...GAATATTCTGCTTGTGTGGATCAGCCCCTCCCCAGGTAGACAGAGCTGATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGCAGAAGAAGGAATTCATTAGACCTGTTTGCTCTGGTTTCTCATTTACTCCCACCTATGACTCATaGGGGAGGCATCAGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: MLQKKEFIRPVCSGFSFTPTYDS*GRHQLC Trigger: ACAGAGCTGATGCCTCCCCCATGAGTCATAGGTGGG...AGTAAATGAGAAACCAGAGCAAACAGGTCTAATGAATTCCTTCTTCTGCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR GCA 72 bp | CAGCCCAACACTGTGGGCTCCTCTGTGGGTACACTCTaGTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QPNTVGSSVGTL*FLWKLRFQVRD Trigger: GTCCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACAGTGTTGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CCA 72 bp | AATGGAGAATACAGCCCAACACTGTGGGCTCCTCTGTaGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: NGEYSPTLWAPL*VHSASSGSCGS Trigger: GGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACAGTGTTGGGCTGTATTCTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR GCA 72 bp | CGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTaGAGAAGAAGGAATTCATTAGACCTGTTTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RWAPGHCSKLQC*RRRNSLDLFAL Trigger: CAGAGCAAACAGGTCTAATGAATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CCA 72 bp | GTAGCAATTGTCAACACCGCCCGCCACATGCAGAGATaGCTTTTGAAGGTAGATATGGTTATTACAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: VAIVNTARHMQR*LLKVDMVITKT Trigger: TGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | GCACCCTGCAGCACCACAGTGCTAGCCTCTGACCCAGGCTACACCCTCCTGTGCTGCAGCACACTCAGGTaGCCCCCGACCTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: APCSTTVLASDPGYTLLCCSTLR*PPTWCR Trigger: CCTGCACCAGGTCGGGGGCCACCTGAGTGTGCTGCA...GCACAGGAGGGTGTAGCCTGGGTCAGAGGCTAGCACTGTGGTGCTGCAGGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAAGTGAGCGAGCCAGCTaGGTGAGGGGGCAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAPLWVHSASSGSCGSRSSERAS*VRGQGL Trigger: CAGCCCCTGCCCCCTCACCCAGCTGGCTCGCTCACT...TGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | TGTGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTGCAGCCTACGCAGGATaGGCTCCAGGAGCTCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CGLLCGYTLLPLEAAVPGAAYAG*APGARR Trigger: GCGCCGAGCTCCTGGAGCCCATCCTGCGTAGGCTGC...ACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | GCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGGATGCATCGTCCCCATaGTGGCGGGTCCCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: APLWVHSASSGSCGSRSGDASSP*WRVPIF Trigger: GAAGATGGGGACCCGCCAGCATGGGGACGATGCATC...CCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | GGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGCGCACTTCTTCATGTaGCGGGCCTTCTTCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSSVGTLCFLWKLRFQVRAHFFM*RAFFSS Trigger: CGAGGAGAAGAAGGCCCGTCACATGAAGAAGTGCGC...CCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGAGCATCGTCCCCATGCTaGCGGGTCCCCATCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLCGYTLLPLEAAVPGQGASSPC*RVPIFR Trigger: TCTGAAGATGGGGACCCGCCAGCATGGGGACGATGC...TCCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAAAGTGCTGCCTTGGGTaGTCTGGGGAGGCTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: WAPLWVHSASSGSCGSRSKCCLG*SGEAPH Trigger: ATGGGGAGCCTCCCCAGACCACCCAAGGCAGCACTT...TGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | GGGACATCACGTGGTCACAGTGTGGAAAACTTGCTAGTTCCACTAGGCTGCAGGGTCAGGTGGGCTTGGTaGCAGTGCAGGCCCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: GTSRGHSVENLLVPLGCRVRWAW*QCRPHG Trigger: CCCATGGGGCCTGCACTGTCACCAAGCCCACCTGAC...CCTGCAGCCTAGTGGAACTAGCAAGTTTTCCACACTGTGACCACGTGATGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGACCTCAGGAGCACCTTaGCTGCACTCTCCTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSSVGTLCFLWKLRFQVRTSGAP*LHSPSV Trigger: CACTGAAGGAGAGTGCAGCCAAGGTGCTCCTGAGGT...CCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | GCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGCCCTTGAATGTCGTGTaGGCGAAGTCAATCATCCGG | + |
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Preference number: 4 (lower is better) Translates to: APLWVHSASSGSCGSRSGPLNVV*AKSIIR Trigger: CCGGATGATTGACTTCGCTCACACGACATTCAAGGG...CCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGTGTCTCTTGTCCTCTaGGTACTGGGAGCACAGACG | + |
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Preference number: 4 (lower is better) Translates to: WAPLWVHSASSGSCGSRSVSLVL*VLGAQT Trigger: CGTCTGTGCTCCCAGTACCCAGAGGACAAGAGACAC...TGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTGCAGAAGAAGGAATCCTGCATGCCACAGATaGGCACACCCAGACAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QRWAPGHCSKLQCCRRRNPACHR*AHPDRP Trigger: CGGCCTGTCTGGGTGTGCGCATCTGTGGCATGCAGG...ATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | CTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGACATCACAGGTTCTCCTTCAGTaGGTTGGCAACCAGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LWVHSASSGSCGSRSGTSQVLLQ*VGNQAK Trigger: CTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTG...TGATGTCCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | CTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGGGAACAGTGCAGGCCCCATaGGTTAAAGCCCTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLCGYTLLPLEAAVPGQGTVQAP*VKALSL Trigger: GAGAGAAAGGGCTTTAACCCATGGGGCCTGCACTGT...TCCCTGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CAA 72 bp | AGGTCAGGGACATCACGTGGTCACAGTGTGGAAAACTaGCTAGTTCCACTAGGCTGCAGGGATCCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RSGTSRGHSVEN*LVPLGCRDPPP Trigger: AGGGGGAGGATCCCTGCAGCCTAGTGGAACTAGCAAGTTTTCCACACTGTGACCACGTGATGTCCCTGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | CAGCGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTGCAGAAGAAGGAATCTGCCGGTTGTCTGCTaGAGTGTCTGCCAGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: QRWAPGHCSKLQCCRRRNLPVVC*SVCQRA Trigger: AGCTCTCTGGCAGACACTTCAGCAGACAACCGGCAG...ATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | AGCAATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGCCAAGGTGGCCTCTaGTGTCTCTCCGGAGACGCA | + |
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Preference number: 4 (lower is better) Translates to: SNCQHRPPHAEMAFEGRYGQGGL*CLSGDA Trigger: TGCGTCTCCGGAGAGACAGCAGAGGCCACCTTGGCC...ATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | GGGACATCACGTGGTCACAGTGTGGAAAACTTGCTAGTTCCACTAGGCTGCAGGTTGTCCTCTGGGTACTaGGAGCACAGACGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GTSRGHSVENLLVPLGCRLSSGY*EHRRVR Trigger: CCTGACTCGTCTGTGCTCCCAGTACCCAGAGGACAA...CCTGCAGCCTAGTGGAACTAGCAAGTTTTCCACACTGTGACCACGTGATGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | GGAGGGGCTGATCCACACAAGCAGAATATTCTTCAAGGCTTCTTCCAGGGTCTTGAGAAAGGGCTTGCCTaGATCCCTCCACCGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGADPHKQNILQGFFQGLEKGLA*IPPPRA Trigger: AGCTCTCGGTGGAGGGATTCAGGCAAGCCCTTTCTC...AAGACCCTGGAAGAAGCCTTGAAGAATATTCTGCTTGTGTGGATCAGCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCTGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTGCAGAAGAAGGAATGGGAGACAAGGGGCTTaGAGACTGTGTAGGCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QRWAPGHCSKLQCCRRRNGRQGA*RLCRRH Trigger: ATGACGCCTACACAGTCTGCAAGCCCCTTGTCTCCC...ATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCAGCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | GGGACATCACGTGGTCACAGTGTGGAAAACTTGCTAGTTCCACTAGGCTGCAGGCCCTTTCTCTCCACCTaGCTCCCATCTTCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTSRGHSVENLLVPLGCRPFLST*LPSSLS Trigger: GGAAAGTGAAGATGGGAGCCAGGTGGAGAGAAAGGG...CCTGCAGCCTAGTGGAACTAGCAAGTTTTCCACACTGTGACCACGTGATGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | AGCAATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATCAGGAAGGGCTCCAGTaGCACACCCACCCCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: SNCQHRPPHAEMAFEGRYQEGLQ*HTHPYL Trigger: AAGATAGGGGTGGGTGTGCCACTGGAGCCCTTCCTG...ATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | CCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCGCCTGGGTACTGAGGTaGCAGTCGGACCTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PPHAEMAFEGRYGYYKDTAWVLR*QSDLRS Trigger: GCTCCTGAGGTCCGACTGCCACCTCAGTACCCAGGC...GGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | CCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCCCAGAAGTGCTGCCTTaGGTGGTCTGGGGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPHAEMAFEGRYGYYKDTPEVLP*VVWGGS Trigger: GGAGCCTCCCCAGACCACCCAAGGCAGCACTTCTGG...GGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | AGGCATCAGCTCTGTCTACCTGGGGAGGGGCTGATCCACACAAGCAGAATATTCAATATAGCCAGGATCTaGTCCCTCGTAGGTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RHQLCLPGEGLIHTSRIFNIARI*SLVGGV Trigger: CACACCACCTACGAGGGACCAGATCCTGGCTATATT...GAATATTCTGCTTGTGTGGATCAGCCCCTCCCCAGGTAGACAGAGCTGATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | ATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCTACAGGGGCAACCAGGCCAAGGTaGCCTCTGCTGTCTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: MQRWLLKVDMVITKTPTGATRPR*PLLSLR Trigger: CCGGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGC...CCCTGTAGGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | AATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTCCATCATGGAGGAACTaGGAAAGGGCTTGCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: NCQHRPPHAEMAFEGRYGPSWRN*ERACLN Trigger: ATTCAGGCAAGCCCTTTCTCAGTTCCTCCATGATGG...ACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR TCA 90 bp | AGCAATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATCCCGCAGAATCCCAATaGGGTTTTCCAGGCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SNCQHRPPHAEMAFEGRYPAESQ*GFPGQK Trigger: TTTTTGGCCTGGAAAACCTCATTGGGATTCTGCGGG...ATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | AATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTCTTCAGATCCAGGATaGAGGGCTGCTTGTACTGTG | + |
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Preference number: 4 (lower is better) Translates to: NCQHRPPHAEMAFEGRYGSSDPG*RAACTV Trigger: CACAGTACAAGCAGCCCTGCATCCTGGATCTGAAGA...ACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| 3UTR CAA 72 bp | AAAGACACCTACAGGGGAAATCTAGACTACCCTAGCTaGGGTCCCTTGGCAAAATTCTGCAGCCCAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KDTYRGNLDYPS*GPLAKFCSPEK Trigger: TTTCTCTGGGCTGCAGAATTTTGCCAAGGGACCCAAGCTAGGGTAGTCTAGATTTCCCCTGTAGGTGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CCA 90 bp | TGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATGCACTTCATGGCCAGTaGCAGGGACTCATAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: CQHRPPHAEMAFEGRYGYALHGQ*QGLIEF Trigger: AAATTCTATGAGTCCCTGCCACTGGCCATGAAGTGC...ATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR GCA 90 bp | AGCAATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATCATAGTACTTATCTTTaGAGAGAAAGCTCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNCQHRPPHAEMAFEGRYHSTYL*RESSSD Trigger: ATCAGAAGAGCTTTCTCTGCAAAGATAAGTACTATG...ATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 90 bp | GTGGCAGTCGGACCTCAGGAGCACCTTGGCTGCACTCTCCTTCAGTaGGCGAGCCAGCTGGGTGAGGGGGCAGGGGCTGCTCTCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAVGPQEHLGCTLLQ*ASQLGEGAGAALAA Trigger: GGCAGCGAGAGCAGCCCCTGCCCCCTCACCCAGCTGGCTCGCTCACTGAAGGAGAGTGCAGCCAAGGTGCTCCTGAGGTCCGACTGCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 90 bp | CGCACACCCAGACAGGCCGAGGTGCTCTGTGCGCACTTCTTCATGTaGCGGGCCTTCTTCTCCTCGGATGCATCGTCCCCATGCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RTPRQAEVLCAHFFM*RAFFSSDASSPCWR Trigger: CCGCCAGCATGGGGACGATGCATCCGAGGAGAAGAAGGCCCGTCACATGAAGAAGTGCGCACAGAGCACCTCGGCCTGTCTGGGTGTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 90 bp | CCTGGCTCCCATCTTCACTTTCCACCAGCGGAGAGGCCTGGGTACTaGGGTGGCAGTCGGACCTCAGGAGCACCTTGGCTGCACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGSHLHFPPAERPGY*GGSRTSGAPWLHSP Trigger: AGGAGAGTGCAGCCAAGGTGCTCCTGAGGTCCGACTGCCACCTCAGTACCCAGGCCTCTCCGCTGGTGGAAAGTGAAGATGGGAGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 90 bp | GGCTCCAGGAGCTCGGCGCGGAGGCGGGTTCCATCATGGAGGAACTaGGAAAGGGCTTGCCTGAATCCCTCCACCGAGAGCTTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSRSSARRRVPSWRN*ERACLNPSTESFLP Trigger: TGGAAGGAAGCTCTCGGTGGAGGGATTCAGGCAAGCCCTTTCTCAGTTCCTCCATGATGGAACCCGCCTCCGCGCCGAGCTCCTGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 90 bp | CGAAGTCAATCATCCGGACATCAACTTTGGCCGGGTCTCCGGAAGTaGCGCCGCCAGAAGTGCTGCCTTGGGTGGTCTGGGGAGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSQSSGHQLWPGLRK*RRQKCCLGWSGEAP Trigger: GGGAGCCTCCCCAGACCACCCAAGGCAGCACTTCTGGCGGCGTCACTTCCGGAGACCCGGCCAAAGTTGATGTCCGGATGATTGACTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 90 bp | ACTCTGGGGAGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTGGGTTaGCAACCAGGCCAAGGTGGCCTCTGCTGTCTCTCCGGAGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLGRPGKAPGSPSVG*QPGQGGLCCLSGDA Trigger: TGCGTCTCCGGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 90 bp | CGCTGCCGGTTGTCTGCTGAAGTGTCTGCCAGAGAGCTACCGCTCTaGACTCTGGGGAGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLSAEVSARELPL*TLGRPGKAPGSPSV Trigger: CACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGTCCAGAGCGGTAGCTCTCTGGCAGACACTTCAGCAGACAACCGGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 90 bp | CTCCCATCTTCACTTTCCACCAGCGGAGAGGCCTGGGTACTGAGGTaGCAGTCGGACCTCAGGAGCACCTTGGCTGCACTCTCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPSSLSTSGEAWVLR*QSDLRSTLAALSFS Trigger: ACTGAAGGAGAGTGCAGCCAAGGTGCTCCTGAGGTCCGACTGCCACCTCAGTACCCAGGCCTCTCCGCTGGTGGAAAGTGAAGATGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 90 bp | AAAGGCTCCAGGTTCTCCTTCAGTGGGTTGGCAACCAGGCCAAGGTaGCCTCTGCTGTCTCTCCGGAGACGCACTGTGATGGTACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGSRFSFSGLATRPR*PLLSLRRRTVMVPL Trigger: CAAAGGTACCATCACAGTGCGTCTCCGGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 90 bp | GGAGCACAGACGAGTCAGGTGGGCTTGGTGACAGTGCAGGCCCCATaGGTTAAAGCCCTTTCTCTCCACCTGGCTCCCATCTTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAQTSQVGLVTVQAP*VKALSLHLAPIFTF Trigger: GAAAGTGAAGATGGGAGCCAGGTGGAGAGAAAGGGCTTTAACCCATGGGGCCTGCACTGTCACCAAGCCCACCTGACTCGTCTGTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CAA 90 bp | TGGGCTCCTCTGTGGGTACACTCTGCTTCCTCTGGAAGCTGCGGTTCCAGGTCAGAACTGAGAAAGGGCTaGCCTGAATCCCTCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: WAPLWVHSASSGSCGSRSELRKG*PESLHR Trigger: TCGGTGGAGGGATTCAGGCAAGCCCTTTCTCAGTTC...TGACCTGGAACCGCAGCTTCCAGAGGAAGCAGAGTGTACCCACAGAGGAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS GCA 90 bp | GTGGCAGGGACTCATAGAATTTCTGTTCCTGGGAGACAAGGGGCTTaGAGACTGTGTAGGCGTCATACTGCAGCACACTCAGGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VAGTHRISVPGRQGA*RLCRRHTAAHSGGP Trigger: GGGGCCACCTGAGTGTGCTGCAGTATGACGCCTACACAGTCTGCAAGCCCCTTGTCTCCCAGGAACAGAAATTCTATGAGTCCCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CAA 90 bp | CCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCGCCAGAAGTGCTGCCTaGGGTGGTCTGGGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPHAEMAFEGRYGYYKDTARSAA*GGLGRL Trigger: GAGCCTCCCCAGACCACCCAAGGCAGCACTTCTGGC...GGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CAA 90 bp | TGGGCTCCAGGGCATTGTAGTAAGCTTCAATGCTGCAGAAGAAGGAATTCATTAACGAGTCAGGTGGGCTaGGTGACAGTGCAGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WAPGHCSKLQCCRRRNSLTSQVG*VTVQAP Trigger: TGGGGCCTGCACTGTCACCAAGCCCACCTGACTCGT...TAATGAATTCCTTCTTCTGCAGCATTGAAGCTTACTACAATGCCCTGGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CAA 90 bp | AATTGTCAACACCGCCCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTAGGATGCAGGGCTGCTaGTACTGTGACACCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: NCQHRPPHAEMAFEGRYGRMQGC*YCDTTF Trigger: AAATGTGGTGTCACAGTACAAGCAGCCCTGCATCCT...ACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGGGCGGTGTTGACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS-3UTR CAA 90 bp | CCGCCACATGCAGAGATGGCTTTTGAAGGTAGATATGGTTATTACAAAGACACCACTGTGATGGTACCTTaGTACTTCGGAGTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPHAEMAFEGRYGYYKDTTVMVP*YFGVKH Trigger: GTGCTTCACTCCGAAGTACAAAGGTACCATCACAGT...GGTGTCTTTGTAATAACCATATCTACCTTCAAAAGCCATCTCTGCATGTGGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 90 bp | GGAGAGGCCTGGGTACTGAGGTGGCAGTCGGACCTCAGGAGCACCTaGGCTGCACTCTCCTTCAGTGAGCGAGCCAGCTGGGTGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEAWVLRWQSDLRST*AALSFSERASWVRG Trigger: CCCCCTCACCCAGCTGGCTCGCTCACTGAAGGAGAGTGCAGCCAAGGTGCTCCTGAGGTCCGACTGCCACCTCAGTACCCAGGCCTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 90 bp | GACTCTGGGGAGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTGGGTaGGCAACCAGGCCAAGGTGGCCTCTGCTGTCTCTCCGGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: DSGETWKGSRFSFSG*ATRPRWPLLSLRRR Trigger: GCGTCTCCGGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 72 bp | AGCTCGGCGCGGAGGCGGGTTCCATCATGGAGGAACTaGGAAAGGGCTTGCCTGAATCCCTCCACCGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSARRRVPSWRN*ERACLNPSTES Trigger: GCTCTCGGTGGAGGGATTCAGGCAAGCCCTTTCTCAGTTCCTCCATGATGGAACCCGCCTCCGCGCCGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 72 bp | TCATCCGGACATCAACTTTGGCCGGGTCTCCGGAAGTaGCGCCGCCAGAAGTGCTGCCTTGGGTGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGHQLWPGLRK*RRQKCCLGWSG Trigger: CCCAGACCACCCAAGGCAGCACTTCTGGCGGCGTCACTTCCGGAGACCCGGCCAAAGTTGATGTCCGGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 72 bp | TGGGTACTGAGGTGGCAGTCGGACCTCAGGAGCACCTaGGCTGCACTCTCCTTCAGTGAGCGAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVLRWQSDLRST*AALSFSERASW Trigger: CCAGCTGGCTCGCTCACTGAAGGAGAGTGCAGCCAAGGTGCTCCTGAGGTCCGACTGCCACCTCAGTACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS GCA 72 bp | GCATGCCACAGATGCGCACACCCAGACAGGCCGAGGTaGTCTGTGCGCACTTCTTCATGTGACGGGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACHRCAHPDRPR*SVRTSSCDGPS Trigger: AGAAGGCCCGTCACATGAAGAAGTGCGCACAGAGCACCTCGGCCTGTCTGGGTGTGCGCATCTGTGGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | TGGGGAGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTaGGTTGGCAACCAGGCCAAGGTGGCCTCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WGDLERLQVLLQ*VGNQAKVASAV Trigger: GACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 72 bp | CGGGTCTCCGGAAGTGACGCCGCCAGAAGTGCTGCCTaGGGTGGTCTGGGGAGGCTCCCCATCATAGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: RVSGSDAARSAA*GGLGRLPIIDY Trigger: ATAATCTATGATGGGGAGCCTCCCCAGACCACCCAAGGCAGCACTTCTGGCGGCGTCACTTCCGGAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 72 bp | GGGTACTGGGAGCACAGACGAGTCAGGTGGGCTTGGTaGCAGTGCAGGCCCCATGGGTTAAAGCCCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GYWEHRRVRWAW*QCRPHGLKPFL Trigger: GAGAAAGGGCTTTAACCCATGGGGCCTGCACTGTCACCAAGCCCACCTGACTCGTCTGTGCTCCCAGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS TCA 72 bp | AGACAGGCCGAGGTGCTCTGTGCGCACTTCTTCATGTaGCGGGCCTTCTTCTCCTCGGATGCATCGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQAEVLCAHFFM*RAFFSSDASSP Trigger: TGGGGACGATGCATCCGAGGAGAAGAAGGCCCGTCACATGAAGAAGTGCGCACAGAGCACCTCGGCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS GCA 72 bp | ACAGATGCGCACACCCAGACAGGCCGAGGTGCTCTGTaGGCACTTCTTCATGTGACGGGCCTTCTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TDAHTQTGRGAL*ALLHVTGLLLL Trigger: GAGGAGAAGAAGGCCCGTCACATGAAGAAGTGCGCACAGAGCACCTCGGCCTGTCTGGGTGTGCGCATCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | AGGTTCTCCTTCAGTGGGTTGGCAACCAGGCCAAGGTaGCCTCTGCTGTCTCTCCGGAGACGCACTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RFSFSGLATRPR*PLLSLRRRTVM Trigger: CATCACAGTGCGTCTCCGGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | AGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTGGGTTaGCAACCAGGCCAAGGTGGCCTCTGCTGTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPGKAPGSPSVG*QPGQGGLCCLS Trigger: GGAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | TGCCAGAGAGCTACCGCTCTGGACTCTGGGGAGACCTaGAAAGGCTCCAGGTTCTCCTTCAGTGGGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQRATALDSGET*KGSRFSFSGLA Trigger: TGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGTCCAGAGCGGTAGCTCTCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | ACGAGTCAGGTGGGCTTGGTGACAGTGCAGGCCCCATaGGTTAAAGCCCTTTCTCTCCACCTGGCTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TSQVGLVTVQAP*VKALSLHLAPI Trigger: GATGGGAGCCAGGTGGAGAGAAAGGGCTTTAACCCATGGGGCCTGCACTGTCACCAAGCCCACCTGACTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 72 bp | GAGACCTGGAAAGGCTCCAGGTTCTCCTTCAGTGGGTaGGCAACCAGGCCAAGGTGGCCTCTGCTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETWKGSRFSFSG*ATRPRWPLLSL Trigger: GAGAGACAGCAGAGGCCACCTTGGCCTGGTTGCCAACCCACTGAAGGAGAACCTGGAGCCTTTCCAGGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 90 bp | TCTCTTGTCCTCTGGGTACTGGGAGCACAGACGAGTCAGGTGGGCTaGGTGACAGTGCAGGCCCCATGGGTTAAAGCCCTTTCTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLVLWVLGAQTSQVG*VTVQAPWVKALSLH Trigger: GTGGAGAGAAAGGGCTTTAACCCATGGGGCCTGCACTGTCACCAAGCCCACCTGACTCGTCTGTGCTCCCAGTACCCAGAGGACAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | CTGAAGTGTCTGCCAGAGAGCTACCGCTCTGGACTCTaGGGAGACCTGGAAAGGCTCCAGGTTCTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LKCLPESYRSGL*GDLERLQVLLQ Trigger: CTGAAGGAGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGTCCAGAGCGGTAGCTCTCTGGCAGACACTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 90 bp | AGGTGGCCTCTGCTGTCTCTCCGGAGACGCACTGTGATGGTACCTTaGTACTTCGGAGTGAAGCACTTCATGGCCAGTGGCAGGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RWPLLSLRRRTVMVP*YFGVKHFMASGRDS Trigger: TGAGTCCCTGCCACTGGCCATGAAGTGCTTCACTCCGAAGTACAAAGGTACCATCACAGTGCGTCTCCGGAGAGACAGCAGAGGCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | TTGTCTGCTGAAGTGTCTGCCAGAGAGCTACCGCTCTaGACTCTGGGGAGACCTGGAAAGGCTCCAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSAEVSARELPL*TLGRPGKAPGS Trigger: AGAACCTGGAGCCTTTCCAGGTCTCCCCAGAGTCCAGAGCGGTAGCTCTCTGGCAGACACTTCAGCAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 72 bp | CTGCTGTCTCTCCGGAGACGCACTGTGATGGTACCTTaGTACTTCGGAGTGAAGCACTTCATGGCCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSLRRRTVMVP*YFGVKHFMASG Trigger: GCCACTGGCCATGAAGTGCTTCACTCCGAAGTACAAAGGTACCATCACAGTGCGTCTCCGGAGAGACAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | ATTTTCCAACAGCAAGAACCGGTGTCTCTTGTCCTCTaGGTACTGGGAGCACAGACGAGTCAGGTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFQQQEPVSLVL*VLGAQTSQVGL Trigger: CAAGCCCACCTGACTCGTCTGTGCTCCCAGTACCCAGAGGACAAGAGACACCGGTTCTTGCTGTTGGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CAA 72 bp | GACACCACATTTTCCAACAGCAAGAACCGGTGTCTCTaGTCCTCTGGGTACTGGGAGCACAGACGAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTTFSNSKNRCL*SSGYWEHRRVR Trigger: CCTGACTCGTCTGTGCTCCCAGTACCCAGAGGACAAGAGACACCGGTTCTTGCTGTTGGAAAATGTGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS CCA 72 bp | AATGAGGTTTTCCAGGCCAAAAATATAGCCAGGATCTaGTCCCTCGTAGGTGGTGTGCTCGTTCCAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NEVFQAKNIARI*SLVGGVLVPGA Trigger: GGCTCCTGGAACGAGCACACCACCTACGAGGGACCAGATCCTGGCTATATTTTTGGCCTGGAAAACCTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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| CDS GCA 72 bp | ACTCATAGAATTTCTGTTCCTGGGAGACAAGGGGCTTaGAGACTGTGTAGGCGTCATACTGCAGCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: THRISVPGRQGA*RLCRRHTAAHS Trigger: TGAGTGTGCTGCAGTATGACGCCTACACAGTCTGCAAGCCCCTTGTCTCCCAGGAACAGAAATTCTATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025046.4 |
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