Pregenerated sensors for INVS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028344Ensembl transcript IDs: ENSMUST00000030029.10, ENSMUST00000143433.2
Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CAGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCGGCCTGACCCAGTaGACAAGGGCTGCCTGGCGCTGCTGGGCCCCTCCTCACACCTCC | + |
Preference number: 1 (lower is better) Translates to: QGWSPLLSQQAGLTQ*TRAAWRCWAPPHTS Trigger: GGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 90 bp | TGCAACTGCAGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCGGCCTaGCCCAGTGCACAAGGGCTGCCTGGCGCTGCTGGGCCCCTCCTC | + |
Preference number: 1 (lower is better) Translates to: CNCRAGVLSFLSRPA*PSAQGLPGAAGPLL Trigger: GAGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCTGCAGTTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 90 bp | CTGCCAGGCCGGCTGGACCCAGCTGGGGAGCACCTGTCTCTGAGCTaGTGGGTGCGTCTTTTCTGCGAAGCACCTCTGGGCCTGGCTGCC | + |
Preference number: 1 (lower is better) Translates to: LPGRLDPAGEHLSLS*WVRLFCEAPLGLAA Trigger: GGCAGCCAGGCCCAGAGGTGCTTCGCAGAAAAGACGCACCCATCAGCTCAGAGACAGGTGCTCCCCAGCTGGGTCCAGCCGGCCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | TCCTCTCCTTTCTCAGCAGGCCGGCCTGACCCAGTGCACAAGGGCTaGCTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCA | + |
Preference number: 1 (lower is better) Translates to: SSPFSAGRPDPVHKG*LALLGPSSHLRCLP Trigger: TGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTGAGAAAGGAGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CTCCTTTCTCAGCAGGCCGGCCTGACCCAGTGCACAAGGGCTGCCTaGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCATTGG | + |
Preference number: 1 (lower is better) Translates to: LLSQQAGLTQCTRAA*RCWAPPHTSGVCHW Trigger: CCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTGAGAAAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 90 bp | TGGCACTGCCAGGCCGGCTGGACCCAGCTGGGGAGCACCTGTCTCTaGGCTGATGGGTGCGTCTTTTCTGCGAAGCACCTCTGGGCCTGG | + |
Preference number: 1 (lower is better) Translates to: WHCQAGWTQLGSTCL*ADGCVFSAKHLWAW Trigger: CCAGGCCCAGAGGTGCTTCGCAGAAAAGACGCACCCATCAGCTCAGAGACAGGTGCTCCCCAGCTGGGTCCAGCCGGCCTGGCAGTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | AGGGCTGCCTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTaGCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCT | + |
Preference number: 1 (lower is better) Translates to: RAAWRCWAPPHTSGV*HWSHLCASPQRMFP Trigger: AGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | ACAGGCAACTTCCCCCTTGGCACTGCCAGGCCGGCTGGACCCAGCTaGGGAGCACCTGTCTCTGAGCTGATGGGTGCGTCTTTTCTGCGA | + |
Preference number: 1 (lower is better) Translates to: TGNFPLGTARPAGPS*GAPVSELMGASFLR Trigger: TCGCAGAAAAGACGCACCCATCAGCTCAGAGACAGGTGCTCCCCAGCTGGGTCCAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 90 bp | GGCCTCATTCTGGGGGCTGGGTGGACAGGGGAGGACAGGTGCAGATaGACTGCAGTGGGATCTGGGAGGATCGGTGTCCAGCTGCCCTTT | + |
Preference number: 1 (lower is better) Translates to: GLILGAGWTGEDRCR*TAVGSGRIGVQLPF Trigger: AAAGGGCAGCTGGACACCGATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTGTCCTCCCCTGTCCACCCAGCCCCCAGAATGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | GCCTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCATTaGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCT | + |
Preference number: 1 (lower is better) Translates to: AWRCWAPPHTSGVCH*SHLCASPQRMFPGS Trigger: AGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CTGGGCCTGGCTGCCCTGTCCTGTCTCTTATTGGGCTTCCTGGGGTaGTCCTGCTGGGAAGCACTTGCAACTGCAGGGCTGGAGTCCTCT | + |
Preference number: 1 (lower is better) Translates to: LGLAALSCLLLGFLG*SCWEALATAGLESS Trigger: AGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAGGACAGGGCAGCCAGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | CTGTCTCTTATTGGGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTTaGAACTGCAGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCGGCC | + |
Preference number: 1 (lower is better) Translates to: LSLIGLPGVVLLGST*NCRAGVLSFLSRPA Trigger: GGCCGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | TGGGGGCTGGGTGGACAGGGGAGGACAGGTGCAGATGAACTGCAGTaGGATCTGGGAGGATCGGTGTCCAGCTGCCCTTTCTGCTGTTCA | + |
Preference number: 1 (lower is better) Translates to: WGLGGQGRTGADELQ*DLGGSVSSCPFCCS Trigger: TGAACAGCAGAAAGGGCAGCTGGACACCGATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTGTCCTCCCCTGTCCACCCAGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | CTGGCTGCCCTGTCCTGTCTCTTATTGGGCTTCCTGGGGTGGTCCTaGTGGGAAGCACTTGCAACTGCAGGGCTGGAGTCCTCTCCTTTC | + |
Preference number: 1 (lower is better) Translates to: LAALSCLLLGFLGWS*WEALATAGLESSPF Trigger: GAAAGGAGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAGGACAGGGCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CCTGCTGTGTTCTGGGTCAGGGCTCTGGACTGTGTGGCTAGCAGGTaGCTGTTTGCTAGGGGTTGCGTCCTGCTTGCTGGCCTCATTCTG | + |
Preference number: 1 (lower is better) Translates to: PAVFWVRALDCVASR*LFARGCVLLAGLIL Trigger: CAGAATGAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGAACACAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CGTTCCCTGAAGGTCTATGGAAGAATCCCCTTGGGAGGCTCTGCCTaGACATCTGCCTGGAGGCCTGCTGTGTTCTGGGTCAGGGCTCTG | + |
Preference number: 1 (lower is better) Translates to: RSLKVYGRIPLGGSA*TSAWRPAVFWVRAL Trigger: CAGAGCCCTGACCCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATAGACCTTCAGGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | GAAGGTCTATGGAAGAATCCCCTTGGGAGGCTCTGCCTGGACATCTaGCTGGAGGCCTGCTGTGTTCTGGGTCAGGGCTCTGGACTGTGT | + |
Preference number: 1 (lower is better) Translates to: EGLWKNPLGRLCLDI*LEACCVLGQGSGLC Trigger: ACACAGTCCAGAGCCCTGACCCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATAGACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CCTCTCCTCGGAGAGGGTGGGCACCCTCTGGGTATTCTCCCACCCTaGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTG | + |
Preference number: 1 (lower is better) Translates to: PLLGEGGHPLGILPP*HFRFLCGCAHPVPL Trigger: CAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGGAGAATACCCAGAGGGTGCCCACCCTCTCCGAGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 90 bp | AGGATGAGTGTGGCAGTTCTCATTTCCAGCCATGCTGGCTTGAGGTaGAGCACACAGCTAGGCAGTCCATCCGAGCGCCCTGCTCTGGTC | + |
Preference number: 1 (lower is better) Translates to: RMSVAVLISSHAGLR*STQLGSPSERPALV Trigger: GACCAGAGCAGGGCGCTCGGATGGACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATGGCTGGAAATGAGAACTGCCACACTCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR GCA 90 bp | CTTCCTGAGCTGGTAGCTTCGCCAAGCTCGCTGGATGACCGCCGCTaGCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGTTCCCT | + |
Preference number: 1 (lower is better) Translates to: LPELVASPSSLDDRR*LVFPSKQLFPASFP Trigger: AGGGAACGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAGCGAGCTTGGCGAAGCTACCAGCTCAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | AGGTGTTGTCAGGATGAGTGTGGCAGTTCTCATTTCCAGCCATGCTaGCTTGAGGTGAAGCACACAGCTAGGCAGTCCATCCGAGCGCCC | + |
Preference number: 1 (lower is better) Translates to: RCCQDECGSSHFQPC*LEVKHTARQSIRAP Trigger: GGGCGCTCGGATGGACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATGGCTGGAAATGAGAACTGCCACACTCATCCTGACAACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 90 bp | TGGGTGTTTCACTTGGCTTTCTGGAGGCCGTTCCCTGAAGGTCTATaGAAGAATCCCCTTGGGAGGCTCTGCCTGGACATCTGCCTGGAG | + |
Preference number: 1 (lower is better) Translates to: WVFHLAFWRPFPEGL*KNPLGRLCLDICLE Trigger: CTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATAGACCTTCAGGGAACGGCCTCCAGAAAGCCAAGTGAAACACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CACACAGGCAGAGGGGCCTCTGCAGTGCTCTATGGGTGTTTCACTTaGCTTTCTGGAGGCCGTTCCCTGAAGGTCTATGGAAGAATCCCC | + |
Preference number: 1 (lower is better) Translates to: HTGRGASAVLYGCFT*LSGGRSLKVYGRIP Trigger: GGGGATTCTTCCATAGACCTTCAGGGAACGGCCTCCAGAAAGCCAAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTCTGCCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | GGTGCAGATGAACTGCAGTGGGATCTGGGAGGATCGGTGTCCAGCTaGCCTTTCTGCTGTTCAGCTTCCTTCCTCTTGTTTTCCTCTTCC | + |
Preference number: 1 (lower is better) Translates to: GADELQWDLGGSVSS*PFCCSASFLLFSSS Trigger: GGAAGAGGAAAACAAGAGGAAGGAAGCTGAACAGCAGAAAGGGCAGCTGGACACCGATCCTCCCAGATCCCACTGCAGTTCATCTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | TCCAGTTCTTTCCTCCAAACCTGGAGGAGCAGGGCTGTGCACACTTaGGTACATCTGAGCACTTCTCTGGCTCCAAGCTGCTTCAAATGC | + |
Preference number: 1 (lower is better) Translates to: SSSFLQTWRSRAVHT*VHLSTSLAPSCFKC Trigger: GCATTTGAAGCAGCTTGGAGCCAGAGAAGTGCTCAGATGTACCCAAGTGTGCACAGCCCTGCTCCTCCAGGTTTGGAGGAAAGAACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 90 bp | ATGTCCTTTCCCTTCTTGAGAACAACCGTAGATCTGCCTGAGCACTaGGTGCCTGGCATACTTTGTGGCCGACGAGCCTTTGGATGGACT | + |
Preference number: 1 (lower is better) Translates to: MSFPFLRTTVDLPEH*VPGILCGRRAFGWT Trigger: AGTCCATCCAAAGGCTCGTCGGCCACAAAGTATGCCAGGCACTCAGTGCTCAGGCAGATCTACGGTTGTTCTCAAGAAGGGAAAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | CCTGCAAGTTGGTCAGAAGATGCAGAGGGGAAGAGAAGCCTGAGTTaGTTGGTGCATTCTGCTGTAAGCCCTGTCTTGCTGACTTTTGGT | + |
Preference number: 1 (lower is better) Translates to: PASWSEDAEGKRSLS*LVHSAVSPVLLTFG Trigger: ACCAAAAGTCAGCAAGACAGGGCTTACAGCAGAATGCACCAACCAACTCAGGCTTCTCTTCCCCTCTGCATCTTCTGACCAACTTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 90 bp | GCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTaGGATAGCCCTTGCTCCAGTTATTCAGGACCCACAGGGAGGCCT | + |
Preference number: 1 (lower is better) Translates to: AAQLEEHILHIGNSF*DSPCSSYSGPTGRP Trigger: AGGCCTCCCTGTGGGTCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 90 bp | ATGGACTCTTCGATGTCCTGCTTACTGAGATGGACTTTGGGAATTTaGGTTCCAGTTCTTTCCTCCAAACCTGGAGGAGCAGGGCTGTGC | + |
Preference number: 1 (lower is better) Translates to: MDSSMSCLLRWTLGI*VPVLSSKPGGAGLC Trigger: GCACAGCCCTGCTCCTCCAGGTTTGGAGGAAAGAACTGGAACTCAAATTCCCAAAGTCCATCTCAGTAAGCAGGACATCGAAGAGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | AGAAGATGCAGAGGGGAAGAGAAGCCTGAGTTGGTTGGTGCATTCTaGTGTAAGCCCTGTCTTGCTGACTTTTGGTGCTGTGCTAGCATT | + |
Preference number: 1 (lower is better) Translates to: RRCRGEEKPELVGAF*CKPCLADFWCCASI Trigger: AATGCTAGCACAGCACCAAAAGTCAGCAAGACAGGGCTTACAGCAGAATGCACCAACCAACTCAGGCTTCTCTTCCCCTCTGCATCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR GCA 90 bp | AAGAGTGGCAGTGTTCAGGAGCAGTGGCTTACAGACTTACATTACTaGTTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATA | + |
Preference number: 1 (lower is better) Translates to: KSGSVQEQWLTDLHY*FSVYISGHPQGPSI Trigger: TATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTCCTGAACACTGCCACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 90 bp | GGCACTCTGTTATCATGGAGTAAGCACTGTGCTAGGGTACTTCTATaGCAGTGGGTGTTTGCTGTGGGGATTTACATCTCAGTCGGTCAG | + |
Preference number: 1 (lower is better) Translates to: GTLLSWSKHCARVLL*QWVFAVGIYISVGQ Trigger: CTGACCGACTGAGATGTAAATCCCCACAGCAAACACCCACTGCCATAGAAGTACCCTAGCACAGTGCTTACTCCATGATAACAGAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 90 bp | GAGATGGACTTTGGGAATTTGAGTTCCAGTTCTTTCCTCCAAACCTaGAGGAGCAGGGCTGTGCACACTTGGGTACATCTGAGCACTTCT | + |
Preference number: 1 (lower is better) Translates to: EMDFGNLSSSSFLQT*RSRAVHTWVHLSTS Trigger: AGAAGTGCTCAGATGTACCCAAGTGTGCACAGCCCTGCTCCTCCAGGTTTGGAGGAAAGAACTGGAACTCAAATTCCCAAAGTCCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | TTTGTAGACTGCTTGGATTTTGAAGGCAGCGATGTCTTGTATAGCTaGGATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTC | + |
Preference number: 1 (lower is better) Translates to: FVDCLDFEGSDVLYS*DGQGTMFQHELDHL Trigger: GAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTATACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 90 bp | CTTCCGGTCTCGGAAGGCTTTTCTGACCTTGTATCCTTTGTAGACTaGTTGGATTTTGAAGGCAGCGATGTCTTGTATAGCTGCGATGGA | + |
Preference number: 1 (lower is better) Translates to: LPVSEGFSDLVSFVD*LDFEGSDVLYSCDG Trigger: TCCATCGCAGCTATACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCTACAAAGGATACAAGGTCAGAAAAGCCTTCCGAGACCGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 90 bp | TGTTTTTCTCTGCAGACTTTAAAGAGTGGCAGTGTTCAGGAGCAGTaGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGC | + |
Preference number: 1 (lower is better) Translates to: CFSLQTLKSGSVQEQ*LTDLHYCFSVYISG Trigger: GCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTCCTGAACACTGCCACTCTTTAAAGTCTGCAGAGAAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 90 bp | TCTCTTGTGATTTTCATTACAGTATGTTCCAGGGAAGTAAAGAGTTaGGGGTGGTTGTTGTGGCCCAGGTTTCCTATCTCATTGAAGAAG | + |
Preference number: 1 (lower is better) Translates to: SLVIFITVCSREVKS*GWLLWPRFPISLKK Trigger: CTTCTTCAATGAGATAGGAAACCTGGGCCACAACAACCACCCTCAACTCTTTACTTCCCTGGAACATACTGTAATGAAAATCACAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 90 bp | ATGCTGGGTAACAAGTCTTTAGGTGCAAATAGTAAAGCGTTCTCATaGGTAAGAGTTTACAGAGAGCAGAATTCCACACTGGTTCTGATC | + |
Preference number: 1 (lower is better) Translates to: MLGNKSLGANSKAFS*VRVYREQNSTLVLI Trigger: GATCAGAACCAGTGTGGAATTCTGCTCTCTGTAAACTCTTACTCATGAGAACGCTTTACTATTTGCACCTAAAGACTTGTTACCCAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | TTCTGCGAAGCACCTCTGGGCCTGGCTGCCCTGTCCTGTCTCTTATTGGGCTTCGCCGGCCTGACCCAGTaGACAAGGGCTGCCTGGCGC | + |
Preference number: 2 (lower is better) Translates to: FCEAPLGLAALSCLLLGFAGLTQ*TRAAWR Trigger: GCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGC...GAAGCCCAATAAGAGACAGGACAGGGCAGCCAGGCCCAGAGGTGCTTCGCAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | TGCCTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCATaGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTC | + |
Preference number: 2 (lower is better) Translates to: CLALLGPSSHLRCLP*VSPLRFSTEDVPWF Trigger: GAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGCCAGTGCACAAGGGCTaGCTGGCGCTGCTGGGCCCC | + |
Preference number: 2 (lower is better) Translates to: LDDRRCLVFPSKQLFPASPVHKG*LALLGP Trigger: GGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGG...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | TGTTCTGGGTCAGGGCTCTGGACTGTGTGGCTAGCAGGTGGCTGTTaGCTAGGGGTTGCGTCCTGCTTGCTGGCCTCATTCTGGGGGCTG | + |
Preference number: 2 (lower is better) Translates to: CSGSGLWTVWLAGGC*LGVASCLLASFWGL Trigger: CAGCCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | CCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTGGAGCTGTaGCCACCTTCCCAGGATCTGGGGTGCACACAGGCAGAGGGGCCT | + |
Preference number: 2 (lower is better) Translates to: PLRFSTEDVPWFLEL*PPSQDLGCTQAEGP Trigger: AGGCCCCTCTGCCTGTGTGCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | CCTGTCTCTTATTGGGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTaGCAACTGCAGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCGGC | + |
Preference number: 2 (lower is better) Translates to: PVSYWASWGGPAGKH*QLQGWSPLLSQQAG Trigger: GCCGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | TTCTGCGAAGCACCTCTGGGCCTGGCTGCCCTGTCCTGTCTCTTATTGGGCTTCCCTCATTCTGGGGGCTaGGTGGACAGGGGAGGACAG | + |
Preference number: 2 (lower is better) Translates to: FCEAPLGLAALSCLLLGFPHSGG*VDRGGQ Trigger: CTGTCCTCCCCTGTCCACCCAGCCCCCAGAATGAGG...GAAGCCCAATAAGAGACAGGACAGGGCAGCCAGGCCCAGAGGTGCTTCGCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACTGCACAAGGGCTGCCTaGCGCTGCTGGGCCCCTCCT | + |
Preference number: 2 (lower is better) Translates to: VADEPLDGLFDVLLTEMDCTRAA*RCWAPP Trigger: AGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCA...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | TTGGGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTTGCAACTGCAGGGCTGGAGGCAGATGAACTGCAGTaGGATCTGGGAGGATCGGTG | + |
Preference number: 2 (lower is better) Translates to: LGFLGWSCWEALATAGLEADELQ*DLGGSV Trigger: CACCGATCCTCCCAGATCCCACTGCAGTTCATCTGC...CTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | TCGCTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTTGCTGGCCTCATTCTaGGGGCTGGGTGGACAGGGG | + |
Preference number: 2 (lower is better) Translates to: SLDDRRCLVFPSKQLFPALLASF*GLGGQG Trigger: CCCCTGTCCACCCAGCCCCCAGAATGAGGCCAGCAA...AGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GCAGGTGGCTGTTTGCTAGGGGTTGCGTCCTGCTTGCTGGCCTCATTCTGGGGGAACTGGATCACCTCATaGCGCTCACCAAGCAATGCA | + |
Preference number: 2 (lower is better) Translates to: AGGCLLGVASCLLASFWGNWITS*RSPSNA Trigger: TGCATTGCTTGGTGAGCGCCATGAGGTGATCCAGTT...CCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GGATCATGGGAAAATTCATCCCATGCTGCCCCCATCTGCTCTCCACTGTGGTGGTTGCGTCCTGCTTGCTaGCCTCATTCTGGGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: GSWENSSHAAPICSPLWWLRPAC*PHSGGW Trigger: CCAGCCCCCAGAATGAGGCCAGCAAGCAGGACGCAA...CCACCACAGTGGAGAGCAGATGGGGGCAGCATGGGATGAATTTTCCCATGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | CTTGCTTCTTGGTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCGGCTGGACCCAGCTaGGGAGCACCTGTCTCTGAG | + |
Preference number: 2 (lower is better) Translates to: LASWCVTVERTLISTGNFPAGPS*GAPVSE Trigger: CTCAGAGACAGGTGCTCCCCAGCTGGGTCCAGCCGG...GAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACACCAAGAAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | GTACATCTGAGCACTTCTCTGGCTCCAAGCTGCTTCAAATGCAGAAGCCGAGACTCCCAGGATCTGGGGTaGACACAGGCAGAGGGGCCT | + |
Preference number: 2 (lower is better) Translates to: VHLSTSLAPSCFKCRSRDSQDLG*TQAEGP Trigger: AGGCCCCTCTGCCTGTGTGCACCCCAGATCCTGGGA...GTCTCGGCTTCTGCATTTGAAGCAGCTTGGAGCCAGAGAAGTGCTCAGATGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGAGGCCTGCTGTGTTCTaGGTCAGGGCTCTGGACTGT | + |
Preference number: 2 (lower is better) Translates to: LDDRRCLVFPSKQLFPASRPAVF*VRALDC Trigger: ACAGTCCAGAGCCCTGACCCAGAACACAGCAGGCCT...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | CGAAACAGCTCTTTCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTGCCTGGACATCTGCCTaGAGGCCTGCTGTGTTCTGG | + |
Preference number: 2 (lower is better) Translates to: RNSSFLLRSLWIISRRCSAWTSA*RPAVFW Trigger: CCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGC...AGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTGCCTCCGGTGTTTGCCATTaGTCTCACCTCTGCGCTTCT | + |
Preference number: 2 (lower is better) Translates to: VTVERTLISTGNFPLGTASGVCH*SHLCAS Trigger: AGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGA...GGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | ACTTTGTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATCTGCGAAGCACCTCTaGGCCTGGCTGCCCTGTCCT | + |
Preference number: 2 (lower is better) Translates to: TLWPTSLWMDSSMSCLLRSAKHL*AWLPCP Trigger: AGGACAGGGCAGCCAGGCCCAGAGGTGCTTCGCAGA...TCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCACAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACAGGCAGAGGGGCCTCTaGAGTGCTCTATGGGTGTTT | + |
Preference number: 2 (lower is better) Translates to: VADEPLDGLFDVLLTEMDRQRGL*SALWVF Trigger: AAACACCCATAGAGCACTGCAGAGGCCCCTCTGCCT...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTGCCTGTTCCAGCATGAACTaGATCACCTCATGGCGCTCA | + |
Preference number: 2 (lower is better) Translates to: VTVERTLISTGNFPLGTACSSMN*ITSWRS Trigger: TGAGCGCCATGAGGTGATCCAGTTCATGCTGGAACA...GGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GGATCATGGGAAAATTCATCCCATGCTGCCCCCATCTGCTCTCCACTGTGGTGGTGTGTGGCTAGCAGGTaGCTGTTTGCTAGGGGTTGC | + |
Preference number: 2 (lower is better) Translates to: GSWENSSHAAPICSPLWWCVASR*LFARGC Trigger: GCAACCCCTAGCAAACAGCCACCTGCTAGCCACACA...CCACCACAGTGGAGAGCAGATGGGGGCAGCATGGGATGAATTTTCCCATGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | AAAGACAATCTGAAGTCAAAGGATCATGGGAAAATTCATCCCATGCTGCCCCCAGCTGCCTGGCGCTGCTaGGCCCCTCCTCACACCTCC | + |
Preference number: 2 (lower is better) Translates to: KDNLKSKDHGKIHPMLPPAAWRC*APPHTS Trigger: GGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGC...TGGGGGCAGCATGGGATGAATTTTCCCATGATCCTTTGACTTCAGATTGTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | TGCCTGAGCACTGAGTGCCTGGCATACTTTGTGGCCGACGAGCCTTaGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACTTTGGG | + |
Preference number: 2 (lower is better) Translates to: CLSTECLAYFVADEP*DGLFDVLLTEMDFG Trigger: CCCAAAGTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCACAAAGTATGCCAGGCACTCAGTGCTCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | TTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGTTCCCTCTGGATTATCAGCAGGGGGTTGCGTCCTGCTTaGTGGCCTCATTCTGGGGGC | + |
Preference number: 2 (lower is better) Translates to: FFRRNSSFLLRSLWIISRGLRPA*WPHSGG Trigger: GCCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCC...CCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCGACGGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | TTTGCCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTCTGTTTGCTAGGGGTTaGGTCCTGCTTGCTGGCCTC | + |
Preference number: 2 (lower is better) Translates to: FAIGLTSALLHRGCSLVLLFARG*VLLAGL Trigger: GAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAG...AAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | GCCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTGGAGAGGGGCCTCTGCAGTaGTCTATGGGTGTTTCACTT | + |
Preference number: 2 (lower is better) Translates to: AIGLTSALLHRGCSLVLGEGPLQ*SMGVSL Trigger: AAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTC...TCCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | GATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGTTCGGTTCTTGGAGCTGTTaGCACCTTCCCAGGATCTGG | + |
Preference number: 2 (lower is better) Translates to: DDRRCLVFPSKQLFPASFGSWSC*HLPRIW Trigger: CCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACC...GAACGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | CTTGCTTCTTGGTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCTGGGGTGGTCCTGCTaGGAAGCACTTGCAACTGCA | + |
Preference number: 2 (lower is better) Translates to: LASWCVTVERTLISTGNFLGWSC*EALATA Trigger: TGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAG...GAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACACCAAGAAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | TCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTACAGGAAGAAGGTCAGGTGCAGATGAACTaGAGTGGGATCTGGGAGGAT | + |
Preference number: 2 (lower is better) Translates to: SCFVPSGLSAGAALQEEGQVQMN*SGIWED Trigger: ATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTG...ACCTTCTTCCTGTAGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACTTCCCTGAAGGTCTATaGAAGAATCCCCTTGGGAGG | + |
Preference number: 2 (lower is better) Translates to: VADEPLDGLFDVLLTEMDFPEGL*KNPLGR Trigger: CCTCCCAAGGGGATTCTTCCATAGACCTTCAGGGAA...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | TCGCTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTGCCAGTCTCTGGAGATaGACAGATGTCCTCATAAAG | + |
Preference number: 2 (lower is better) Translates to: SLDDRRCLVFPSKQLFPAASLWR*TDVLIK Trigger: CTTTATGAGGACATCTGTGCATCTCCAGAGACTGGC...AGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCCGAGCGCCCTGCTCTaGTCCTTTCAGTGCATGCTG | + |
Preference number: 2 (lower is better) Translates to: EPSKTAALAGNQLFKYLCPSALL*SFQCML Trigger: CAGCATGCACTGAAAGGACCAGAGCAGGGCGCTCGG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR CCA 90 bp | TCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTACAGGAAGAAGGTTATGGGTGTTTCACTTaGCTTTCTGGAGGCCGTTCC | + |
Preference number: 2 (lower is better) Translates to: SCFVPSGLSAGAALQEEGYGCFT*LSGGRS Trigger: GGAACGGCCTCCAGAAAGCCAAGTGAAACACCCATA...ACCTTCTTCCTGTAGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACCCTATAAGCTTGTCCTaGGTCACCTTGCTTCTTGGT | + |
Preference number: 2 (lower is better) Translates to: VADEPLDGLFDVLLTEMDPISLS*VTLLLG Trigger: ACCAAGAAGCAAGGTGACCCAGGACAAGCTTATAGG...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | TCCTGCAAGTTGGTCAGAAGATGCAGAGGGGAAGAGAAGCCTGAGTaGGTTGGTGCATTCTGCTGTAAGCCCTGTCTTGCTGACTTTTGG | + |
Preference number: 2 (lower is better) Translates to: SCKLVRRCRGEEKPE*VGAFCCKPCLADFW Trigger: CCAAAAGTCAGCAAGACAGGGCTTACAGCAGAATGCACCAACCAACTCAGGCTTCTCTTCCCCTCTGCATCTTCTGACCAACTTGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGCATGCTGGCTTGAGGTaGAGCACACAGCTAGGCAGT | + |
Preference number: 2 (lower is better) Translates to: FSVYISGHPQGPSILNALHAGLR*STQLGS Trigger: ACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATG...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATGGTGCCACTCAGCAGTaGAAGCCGAGCTTCTGTTCT | + |
Preference number: 2 (lower is better) Translates to: EQWLTDLHYCFSVYISGHGATQQ*KPSFCS Trigger: AGAACAGAAGCTCGGCTTTCACTGCTGAGTGGCACC...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | CTTGCTTCTTGGTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCGATGTCTTGTATAGCTaGGATGGACAGGGCACCATG | + |
Preference number: 2 (lower is better) Translates to: LASWCVTVERTLISTGNFDVLYS*DGQGTM Trigger: CATGGTGCCCTGTCCATCGCAGCTATACAAGACATC...GAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACACCAAGAAGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | AGATTTGATGGGATGATGTCCTTTCCCTTCTTGAGAACAACCGTAGATCTGCCTAAGCACCTCTGGGCCTaGCTGCCCTGTCCTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: RFDGMMSFPFLRTTVDLPKHLWA*LPCPVS Trigger: AGAGACAGGACAGGGCAGCCAGGCCCAGAGGTGCTT...AGGCAGATCTACGGTTGTTCTCAAGAAGGGAAAGGACATCATCCCATCAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR GCA 90 bp | GCCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTGGAGTATCCTTTGTAGACTaGTTGGATTTTGAAGGCAGC | + |
Preference number: 2 (lower is better) Translates to: AIGLTSALLHRGCSLVLGVSFVD*LDFEGS Trigger: GCTGCCTTCAAAATCCAAGCAGTCTACAAAGGATAC...TCCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGCTCTCTGGACCAACCTaGAAACTGAGCACGGTAAGG | + |
Preference number: 2 (lower is better) Translates to: FSVYISGHPQGPSILNALLSGPT*KLSTVR Trigger: CCTTACCGTGCTCAGTTTCCAGGTTGGTCCAGAGAG...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR CCA 90 bp | AAAGACAATCTGAAGTCAAAGGATCATGGGAAAATTCATCCCATGCTGCCCCCATCTGGGTCAGGGCTCTaGACTGTGTGGCTAGCAGGT | + |
Preference number: 2 (lower is better) Translates to: KDNLKSKDHGKIHPMLPPSGSGL*TVWLAG Trigger: ACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGA...TGGGGGCAGCATGGGATGAATTTTCCCATGATCCTTTGACTTCAGATTGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 90 bp | CTTGTATCCTTTGTAGACTGCTTGGATTTTGAAGGCAGCGATGTCTaGTATAGCTGCGATGGACAGGGCACCATGTTCCAGCATGAACTG | + |
Preference number: 2 (lower is better) Translates to: LVSFVDCLDFEGSDV*YSCDGQGTMFQHEL Trigger: CAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTATACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCTACAAAGGATACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR TCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCAGGGGAAGAGAAGCCTaGGTTGGTTGGTGCATTCTG | + |
Preference number: 2 (lower is better) Translates to: QLEEHILHIGNSFWDSPCRGREA*VGWCIL Trigger: CAGAATGCACCAACCAACTCAGGCTTCTCTTCCCCT...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGTCATTCACTTACCAGTaGATCTTTGTGATCTCATCT | + |
Preference number: 2 (lower is better) Translates to: PTLALQISMWLCSSSPTESFTYQ*IFVISS Trigger: AGATGAGATCACAAAGATTCACTGGTAAGTGAATGA...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGATTAAAGAAGCACCATaGTACCTCCTGTTTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: PTLALQISMWLCSSSPTEIKEAP*YLLFEV Trigger: AACTTCAAACAGGAGGTACCATGGTGCTTCTTTAAT...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCAGGTGTTGTCAGGATaGGTGTGGCAGTTCTCATTT | + |
Preference number: 2 (lower is better) Translates to: EPSKTAALAGNQLFKYLCQVLSG*VWQFSF Trigger: AAATGAGAACTGCCACACTCATCCTGACAACACCTG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAAGCACAGTACTGACCTaGCGTCGTCGCTGCCTCTGT | + |
Preference number: 2 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTSTVLT*RRRCLC Trigger: ACAGAGGCAGCGACGACGTCAGGTCAGTACTGTGCT...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGAAGTTGGTCAGAAGATaGAGAGGGGAAGAGAAGCCT | + |
Preference number: 2 (lower is better) Translates to: RQGSPARRAYLTYRQQLLKLVRR*RGEEKP Trigger: AGGCTTCTCTTCCCCTCTGCATCTTCTGACCAACTT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGATTGGTTGGTGCATTCTaGTGTAAGCCCTGTCTTGCT | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGLVGAF*CKPCLA Trigger: AGCAAGACAGGGCTTACAGCAGAATGCACCAACCAA...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | AAAGACAATCTGAAGTCAAAGGATCATGGGAAAATTCATCCCATGCTGCCCCCAGAAACAGCTCTTTCCTaGTTCGTTCCCTCTGGATTA | + |
Preference number: 2 (lower is better) Translates to: KDNLKSKDHGKIHPMLPPETALS*FVPSGL Trigger: TAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTC...TGGGGGCAGCATGGGATGAATTTTCCCATGATCCTTTGACTTCAGATTGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR TCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGTTTGAACCTTGTCTTTaGCCACATATGCTGGGTAAC | + |
Preference number: 2 (lower is better) Translates to: RQGSPARRAYLTYRQQLLFEPCL*PHMLGN Trigger: GTTACCCAGCATATGTGGTCAAAGACAAGGTTCAAA...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCAGTGAGGTAAACACTTaGTTCCTGACCTTCACTGTT | + |
Preference number: 2 (lower is better) Translates to: QLEEHILHIGNSFWDSPCSEVNT*FLTFTV Trigger: AACAGTGAAGGTCAGGAAGCAAGTGTTTACCTCACT...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 90 bp | GTCTCTTGTGATTTTCATTACAGTATGTTCCAGGGAAGTAAAGAGTaGAGGGTGGTTGTTGTGGCCCAGGTTTCCTATCTCATTGAAGAA | + |
Preference number: 2 (lower is better) Translates to: VSCDFHYSMFQGSKE*RVVVVAQVSYLIEE Trigger: TTCTTCAATGAGATAGGAAACCTGGGCCACAACAACCACCCTCAACTCTTTACTTCCCTGGAACATACTGTAATGAAAATCACAAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACCAGGAGAAAACATTTaGACCTTGTCTTTGACCACA | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGPGENI*TLSLTT Trigger: TGTGGTCAAAGACAAGGTTCAAATGTTTTCTCCTGG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR-3UTR TCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCGGCTATAGAACAGTTTaGATTTCTGAGGAGCTAAAT | + |
Preference number: 2 (lower is better) Translates to: EPSKTAALAGNQLFKYLCGYRTV*ISEELN Trigger: ATTTAGCTCCTCAGAAATTCAAACTGTTCTATAGCC...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR TCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGACTCTTATGGAGGCATaGAAAATGTCAGGTTCTCAA | + |
Preference number: 2 (lower is better) Translates to: RQGSPARRAYLTYRQQLLTLMEA*KMSGSQ Trigger: TTGAGAACCTGACATTTTTCATGCCTCCATAAGAGT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACTCTGGTCCTTTCAGTaGATGCTGAGAGGAATAAAA | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGLWSFQ*MLRGIK Trigger: TTTTATTCCTCTCAGCATGCACTGAAAGGACCAGAG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAAATGCTACCTATTCCTaGAAGTTGGTCAGAAGATGC | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGNATYS*KLVRRC Trigger: GCATCTTCTGACCAACTTGCAGGAATAGGTAGCATT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAACTGCTTTTGGGGAATaGTACCTATTCCTGCAAGTT | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGTAFGE*YLFLQV Trigger: AACTTGCAGGAATAGGTAGCATTCCCCAAAAGCAGT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAACAGACTTACATTACTaGTTCAGCGTGTACATCAGT | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGTDLHY*FSVYIS Trigger: ACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCGTTCTCAAACTAAAGTaGCTTTTGTTTTTCTCTGCA | + |
Preference number: 2 (lower is better) Translates to: QLEEHILHIGNSFWDSPCVLKLK*LLFFSA Trigger: TGCAGAGAAAAACAAAAGGCACTTTAGTTTGAGAAC...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAAAGAGAAGCCTGAGTTaGTTGGTGCATTCTGCTGTA | + |
Preference number: 2 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTKRSLS*LVHSAV Trigger: TACAGCAGAATGCACCAACCAACTCAGGCTTCTCTT...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAAAAAGAAACTGCTTTTaGGGAATGCTACCTATTCCT | + |
Preference number: 2 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGKRNCF*GMLPIP Trigger: AGGAATAGGTAGCATTCCCCAAAAGCAGTTTCTTTT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR CCA 72 bp | CAGCAGGCCGGCCTGACCCAGTGCACAAGGGCTGCCTaGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTT | + |
Preference number: 3 (lower is better) Translates to: QQAGLTQCTRAA*RCWAPPHTSGV Trigger: AACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 72 bp | AGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCGGCCTaGCCCAGTGCACAAGGGCTGCCTGGCGCTGCTGGG | + |
Preference number: 3 (lower is better) Translates to: RAGVLSFLSRPA*PSAQGLPGAAG Trigger: CCCAGCAGCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | GGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTaGCACTGCCAGGCCGGCTGGACCCAGCTGGGGAGC | + |
Preference number: 3 (lower is better) Translates to: GENSDQHRQLPP*HCQAGWTQLGS Trigger: GCTCCCCAGCTGGGTCCAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR GCA 72 bp | AACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTaGCAGGCCGGCTGGACCCAGCTGGGGAGCACCTGT | + |
Preference number: 3 (lower is better) Translates to: NSDQHRQLPPWH*QAGWTQLGSTC Trigger: ACAGGTGCTCCCCAGCTGGGTCCAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR GCA 72 bp | CTTCCTGGGGTGGTCCTGCTGGGAAGCACTTGCAACTaGAGGGCTGGAGTCCTCTCCTTTCTCAGCAGGCCG | + |
Preference number: 3 (lower is better) Translates to: LPGVVLLGSTCN*RAGVLSFLSRP Trigger: CGGCCTGCTGAGAAAGGAGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | GGCCTGCTGTGTTCTGGGTCAGGGCTCTGGACTGTGTaGCTAGCAGGTGGCTGTTTGCTAGGGGTTGCGTCC | + |
Preference number: 3 (lower is better) Translates to: GLLCSGSGLWTV*LAGGCLLGVAS Trigger: GGACGCAACCCCTAGCAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGAACACAGCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | CCTGGTTCTTGGAGCTGTTGCCACCTTCCCAGGATCTaGGGTGCACACAGGCAGAGGGGCCTCTGCAGTGCT | + |
Preference number: 3 (lower is better) Translates to: PGSWSCCHLPRI*GAHRQRGLCSA Trigger: AGCACTGCAGAGGCCCCTCTGCCTGTGTGCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | TGGAAGAATCCCCTTGGGAGGCTCTGCCTGGACATCTaGCTGGAGGCCTGCTGTGTTCTGGGTCAGGGCTCT | + |
Preference number: 3 (lower is better) Translates to: WKNPLGRLCLDI*LEACCVLGQGS Trigger: AGAGCCCTGACCCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | GGTGCGTCTTTTCTGCGAAGCACCTCTGGGCCTGGCTaGCCTGTCCTGTCTCTTATTGGGCTTCCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: GASFLRSTSGPG*PVLSLIGLPGV Trigger: CACCCCAGGAAGCCCAATAAGAGACAGGACAGGGCAGCCAGGCCCAGAGGTGCTTCGCAGAAAAGACGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | TTCTGGGTCAGGGCTCTGGACTGTGTGGCTAGCAGGTaGCTGTTTGCTAGGGGTTGCGTCCTGCTTGCTGGC | + |
Preference number: 3 (lower is better) Translates to: FWVRALDCVASR*LFARGCVLLAG Trigger: GCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CAA 90 bp | GGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTTGCAACTGCAGGGCTGGAGTCCTCCTCTTCCCGTTTTTaGGCTGCAGCGTCTTTCCTC | + |
Preference number: 3 (lower is better) Translates to: GFLGWSCWEALATAGLESSSSRF*AAASFL Trigger: GAGGAAAGACGCTGCAGCCAAAAAACGGGAAGAGGA...GGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | CCCAGGATCTGGGGTGCACACAGGCAGAGGGGCCTCTaGAGTGCTCTATGGGTGTTTCACTTGGCTTTCTGG | + |
Preference number: 3 (lower is better) Translates to: PRIWGAHRQRGL*SALWVFHLAFW Trigger: CCAGAAAGCCAAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTCTGCCTGTGTGCACCCCAGATCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | CTGTCCTGTCTCTTATTGGGCTTCCTGGGGTGGTCCTaGTGGGAAGCACTTGCAACTGCAGGGCTGGAGTCC | + |
Preference number: 3 (lower is better) Translates to: LSCLLLGFLGWS*WEALATAGLES Trigger: GGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | GGTGCACACAGGCAGAGGGGCCTCTGCAGTGCTCTATaGGTGTTTCACTTGGCTTTCTGGAGGCCGTTCCCT | + |
Preference number: 3 (lower is better) Translates to: GAHRQRGLCSAL*VFHLAFWRPFP Trigger: AGGGAACGGCCTCCAGAAAGCCAAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTCTGCCTGTGTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CAA 90 bp | CGAAACAGCTCTTTCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTGGGGTTGCGTCCTGCTaGCTGGCCTCATTCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: RNSSFLLRSLWIISRRCSGVASC*LASFWG Trigger: CCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCCC...AGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR-3UTR CAA 90 bp | CAGGGGAGGACAGGTGCAGATGAACTGCAGTGGGATCTGGGAGGATCGGTGTCCGAAGGCAGCGATGTCTaGTATAGCTGCGATGGACAG | + |
Preference number: 3 (lower is better) Translates to: QGRTGADELQWDLGGSVSEGSDV*YSCDGQ Trigger: CTGTCCATCGCAGCTATACAAGACATCGCTGCCTTC...GGACACCGATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTGTCCTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR-3UTR CAA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGCTAGCAGGTGGCTGTTaGCTAGGGGTTGCGTCCTGC | + |
Preference number: 3 (lower is better) Translates to: LDDRRCLVFPSKQLFPASLAGGC*LGVASC Trigger: GCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAG...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 72 bp | GTGGCAGTTCTCATTTCCAGCCATGCTGGCTTGAGGTaGAGCACACAGCTAGGCAGTCCATCCGAGCGCCCT | + |
Preference number: 3 (lower is better) Translates to: VAVLISSHAGLR*STQLGSPSERP Trigger: AGGGCGCTCGGATGGACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATGGCTGGAAATGAGAACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR GCA 72 bp | CCTGAAGGTCTATGGAAGAATCCCCTTGGGAGGCTCTaGCTGGACATCTGCCTGGAGGCCTGCTGTGTTCTG | + |
Preference number: 3 (lower is better) Translates to: PEGLWKNPLGRL*LDICLEACCVL Trigger: CAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATAGACCTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | TCTCCACAGAGGATGTTCCCTGGTTCTTGGAGCTGTTaGCACCTTCCCAGGATCTGGGGTGCACACAGGCAG | + |
Preference number: 3 (lower is better) Translates to: SPQRMFPGSWSC*HLPRIWGAHRQ Trigger: CTGCCTGTGTGCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACATCCTCTGTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | AGGGGAGGACAGGTGCAGATGAACTGCAGTGGGATCTaGGAGGATCGGTGTCCAGCTGCCCTTTCTGCTGTT | + |
Preference number: 3 (lower is better) Translates to: RGGQVQMNCSGI*EDRCPAALSAV Trigger: AACAGCAGAAAGGGCAGCTGGACACCGATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTGTCCTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | AAGGTCTATGGAAGAATCCCCTTGGGAGGCTCTGCCTaGACATCTGCCTGGAGGCCTGCTGTGTTCTGGGTC | + |
Preference number: 3 (lower is better) Translates to: KVYGRIPLGGSA*TSAWRPAVFWV Trigger: GACCCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATAGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | CTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTaGAGCTGTTGCCACCTTCCCAGGATCTGGGGTGCA | + |
Preference number: 3 (lower is better) Translates to: LCASPQRMFPGS*SCCHLPRIWGA Trigger: TGCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | TCCTGTCTCTTATTGGGCTTCCTGGGGTGGTCCTGCTaGGAAGCACTTGCAACTGCAGGGCTGGAGTCCTCT | + |
Preference number: 3 (lower is better) Translates to: SCLLLGFLGWSC*EALATAGLESS Trigger: AGAGGACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAATAAGAGACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | CCTCACACCTCCGGTGTTTGCCATTGGTCTCACCTCTaGGCTTCTCCACAGAGGATGTTCCCTGGTTCTTGG | + |
Preference number: 3 (lower is better) Translates to: PHTSGVCHWSHL*ASPQRMFPGSW Trigger: CCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGAGGTGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR GCA 72 bp | CTGGTAGCTTCGCCAAGCTCGCTGGATGACCGCCGCTaGCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCT | + |
Preference number: 3 (lower is better) Translates to: LVASPSSLDDRR*LVFPSKQLFPA Trigger: AGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAGCGAGCTTGGCGAAGCTACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | GGAGAGGGTGGGCACCCTCTGGGTATTCTCCCACCCTaGCACTTCAGATTTCTATGTGGCTGTGCTCATCCA | + |
Preference number: 3 (lower is better) Translates to: GEGGHPLGILPP*HFRFLCGCAHP Trigger: TGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGGAGAATACCCAGAGGGTGCCCACCCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 72 bp | TTCCTCCAAACCTGGAGGAGCAGGGCTGTGCACACTTaGGTACATCTGAGCACTTCTCTGGCTCCAAGCTGC | + |
Preference number: 3 (lower is better) Translates to: FLQTWRSRAVHT*VHLSTSLAPSC Trigger: GCAGCTTGGAGCCAGAGAAGTGCTCAGATGTACCCAAGTGTGCACAGCCCTGCTCCTCCAGGTTTGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CAA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACTATGGAAGAATCCCCTaGGGAGGCTCTGCCTGGACA | + |
Preference number: 3 (lower is better) Translates to: VADEPLDGLFDVLLTEMDYGRIP*GGSAWT Trigger: TGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATA...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | AGAGGGGCCTCTGCAGTGCTCTATGGGTGTTTCACTTaGCTTTCTGGAGGCCGTTCCCTGAAGGTCTATGGA | + |
Preference number: 3 (lower is better) Translates to: RGASAVLYGCFT*LSGGRSLKVYG Trigger: TCCATAGACCTTCAGGGAACGGCCTCCAGAAAGCCAAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CAA 90 bp | TCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTACAGGAAGAAGGTTGGTTCTTGGAGCTGTaGCCACCTTCCCAGGATCTG | + |
Preference number: 3 (lower is better) Translates to: SCFVPSGLSAGAALQEEGWFLEL*PPSQDL Trigger: CAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCA...ACCTTCTTCCTGTAGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR-3UTR CAA 90 bp | AGATTTGATGGGATGATGTCCTTTCCCTTCTTGAGAACAACCGTAGATCTGCCTCAGGCAACTTCCCCCTaGGCACTGCCAGGCCGGCTG | + |
Preference number: 3 (lower is better) Translates to: RFDGMMSFPFLRTTVDLPQATSP*ALPGRL Trigger: CAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCTG...AGGCAGATCTACGGTTGTTCTCAAGAAGGGAAAGGACATCATCCCATCAAATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 72 bp | CCCTTCTTGAGAACAACCGTAGATCTGCCTGAGCACTaGGTGCCTGGCATACTTTGTGGCCGACGAGCCTTT | + |
Preference number: 3 (lower is better) Translates to: PFLRTTVDLPEH*VPGILCGRRAF Trigger: AAAGGCTCGTCGGCCACAAAGTATGCCAGGCACTCAGTGCTCAGGCAGATCTACGGTTGTTCTCAAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 72 bp | GTCCTTTCCCTTCTTGAGAACAACCGTAGATCTGCCTaGGCACTGAGTGCCTGGCATACTTTGTGGCCGACG | + |
Preference number: 3 (lower is better) Translates to: VLSLLENNRRSA*ALSAWHTLWPT Trigger: CGTCGGCCACAAAGTATGCCAGGCACTCAGTGCTCAGGCAGATCTACGGTTGTTCTCAAGAAGGGAAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR GCA 72 bp | TGTCAGGATGAGTGTGGCAGTTCTCATTTCCAGCCATaGTGGCTTGAGGTGAAGCACACAGCTAGGCAGTCC | + |
Preference number: 3 (lower is better) Translates to: CQDECGSSHFQP*WLEVKHTARQS Trigger: GGACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATGGCTGGAAATGAGAACTGCCACACTCATCCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 72 bp | CAGGATGAGTGTGGCAGTTCTCATTTCCAGCCATGCTaGCTTGAGGTGAAGCACACAGCTAGGCAGTCCATC | + |
Preference number: 3 (lower is better) Translates to: QDECGSSHFQPC*LEVKHTARQSI Trigger: GATGGACTGCCTAGCTGTGTGCTTCACCTCAAGCCAGCATGGCTGGAAATGAGAACTGCCACACTCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR CCA 72 bp | TACAGGAAGAAGGTGAATATTCATACACTGTCCAGGTaGGGGGCCATGAGCCACGCCAGTCTCTGGAGATGC | + |
Preference number: 3 (lower is better) Translates to: YRKKVNIHTLSR*GAMSHASLWRC Trigger: GCATCTCCAGAGACTGGCGTGGCTCATGGCCCCCCACCTGGACAGTGTATGAATATTCACCTTCTTCCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | CTGAGTGCCTGGCATACTTTGTGGCCGACGAGCCTTTaGATGGACTCTTCGATGTCCTGCTTACTGAGATGG | + |
Preference number: 3 (lower is better) Translates to: LSAWHTLWPTSL*MDSSMSCLLRW Trigger: CCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCACAAAGTATGCCAGGCACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR TCA 72 bp | TTTTGGTGCTGTGCTAGCATTGGTGCCACTCAGCAGTaGAAGCCGAGCTTCTGTTCTCTCTGGACCAACCTG | + |
Preference number: 3 (lower is better) Translates to: FWCCASIGATQQ*KPSFCSLWTNL Trigger: CAGGTTGGTCCAGAGAGAACAGAAGCTCGGCTTTCACTGCTGAGTGGCACCAATGCTAGCACAGCACCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR GCA 72 bp | ACTTGGGTACATCTGAGCACTTCTCTGGCTCCAAGCTaGTTCAAATGCAGAAGCCGAGACAGGTGCTTCCTG | + |
Preference number: 3 (lower is better) Translates to: TWVHLSTSLAPS*FKCRSRDRCFL Trigger: CAGGAAGCACCTGTCTCGGCTTCTGCATTTGAAGCAGCTTGGAGCCAGAGAAGTGCTCAGATGTACCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | TTCCGTCGAAACAGCTCTTTCCTGCTTCGTTCCCTCTaGATTATCAGCAGGCGCTGCTCTACAGGAAGAAGG | + |
Preference number: 3 (lower is better) Translates to: FRRNSSFLLRSL*IISRRCSTGRR Trigger: CCTTCTTCCTGTAGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCGACGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR GCA 72 bp | AGAGGGGAAGAGAAGCCTGAGTTGGTTGGTGCATTCTaGTGTAAGCCCTGTCTTGCTGACTTTTGGTGCTGT | + |
Preference number: 3 (lower is better) Translates to: RGEEKPELVGAF*CKPCLADFWCC Trigger: ACAGCACCAAAAGTCAGCAAGACAGGGCTTACAGCAGAATGCACCAACCAACTCAGGCTTCTCTTCCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR GCA 72 bp | AGTGTTCAGGAGCAGTGGCTTACAGACTTACATTACTaGTTCAGCGTGTACATCAGTGGCCATCCCCAAGGG | + |
Preference number: 3 (lower is better) Translates to: SVQEQWLTDLHY*FSVYISGHPQG Trigger: CCCTTGGGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTCCTGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGAAGAGAAGCCTGAGTaGGTTGGTGCATTCTGCTGT | + |
Preference number: 3 (lower is better) Translates to: FSVYISGHPQGPSILNALEEKPE*VGAFCC Trigger: ACAGCAGAATGCACCAACCAACTCAGGCTTCTCTTC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CAA 90 bp | TTTGCCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTTCCTTTGTAGACTGCTaGGATTTTGAAGGCAGCGAT | + |
Preference number: 3 (lower is better) Translates to: FAIGLTSALLHRGCSLVLSFVDC*DFEGSD Trigger: ATCGCTGCCTTCAAAATCCAAGCAGTCTACAAAGGA...AAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR-3UTR CAA 90 bp | GTACATCTGAGCACTTCTCTGGCTCCAAGCTGCTTCAAATGCAGAAGCCGAGACTCAGCTTCCTTCCTCTaGTTTTCCTCTTCCCGTTTT | + |
Preference number: 3 (lower is better) Translates to: VHLSTSLAPSCFKCRSRDSASFL*FSSSRF Trigger: AAAACGGGAAGAGGAAAACAAGAGGAAGGAAGCTGA...GTCTCGGCTTCTGCATTTGAAGCAGCTTGGAGCCAGAGAAGTGCTCAGATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR TCA 72 bp | TCGATGTCCTGCTTACTGAGATGGACTTTGGGAATTTaGGTTCCAGTTCTTTCCTCCAAACCTGGAGGAGCA | + |
Preference number: 3 (lower is better) Translates to: SMSCLLRWTLGI*VPVLSSKPGGA Trigger: TGCTCCTCCAGGTTTGGAGGAAAGAACTGGAACTCAAATTCCCAAAGTCCATCTCAGTAAGCAGGACATCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CCA 72 bp | TGTGTCCAAAGAACCTTCCAAAACAGCAGCACTAGCTaGCAACCAACTGTTCAAATACCTATGCCTTTAGGG | + |
Preference number: 3 (lower is better) Translates to: CVQRTFQNSSTS*QPTVQIPMPLG Trigger: CCCTAAAGGCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTCTTTGGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CCA 72 bp | TTATCATGGAGTAAGCACTGTGCTAGGGTACTTCTATaGCAGTGGGTGTTTGCTGTGGGGATTTACATCTCA | + |
Preference number: 3 (lower is better) Translates to: LSWSKHCARVLL*QWVFAVGIYIS Trigger: TGAGATGTAAATCCCCACAGCAAACACCCACTGCCATAGAAGTACCCTAGCACAGTGCTTACTCCATGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCATGGTACCTCCTGTTaGAAGTTAATTGTTCATGCA | + |
Preference number: 3 (lower is better) Translates to: EQWLTDLHYCFSVYISGHHGTSC*KLIVHA Trigger: TGCATGAACAATTAACTTCAAACAGGAGGTACCATG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR GCA 72 bp | TCGGAAGGCTTTTCTGACCTTGTATCCTTTGTAGACTaGTTGGATTTTGAAGGCAGCGATGTCTTGTATAGC | + |
Preference number: 3 (lower is better) Translates to: SEGFSDLVSFVD*LDFEGSDVLYS Trigger: GCTATACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCTACAAAGGATACAAGGTCAGAAAAGCCTTCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
||
3UTR CCA 72 bp | CTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTaGGATAGCCCTTGCTCCAGTTATTCAGGACCCACA | + |
Preference number: 3 (lower is better) Translates to: LEEHILHIGNSF*DSPCSSYSGPT Trigger: TGTGGGTCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR-3UTR CAA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCCAAAAGAAACTGCTTTaGGGGAATGCTACCTATTCC | + |
Preference number: 3 (lower is better) Translates to: QLEEHILHIGNSFWDSPCQKKLL*GNATYS Trigger: GGAATAGGTAGCATTCCCCAAAAGCAGTTTCTTTTG...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR TCA 72 bp | ATTTTCATTACAGTATGTTCCAGGGAAGTAAAGAGTTaGGGGTGGTTGTTGTGGCCCAGGTTTCCTATCTCA | + |
Preference number: 3 (lower is better) Translates to: IFITVCSREVKS*GWLLWPRFPIS Trigger: TGAGATAGGAAACCTGGGCCACAACAACCACCCTCAACTCTTTACTTCCCTGGAACATACTGTAATGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 72 bp | CAACTTAAAAGAAAGGACTTACTGTATTTGACAGTGTaGGAGGGCACTCTGTTATCATGGAGTAAGCACTGT | + |
Preference number: 3 (lower is better) Translates to: QLKRKDLLYLTV*EGTLLSWSKHC Trigger: ACAGTGCTTACTCCATGATAACAGAGTGCCCTCTCACACTGTCAAATACAGTAAGTCCTTTCTTTTAAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR TCA 72 bp | AACAAGTCTTTAGGTGCAAATAGTAAAGCGTTCTCATaGGTAAGAGTTTACAGAGAGCAGAATTCCACACTG | + |
Preference number: 3 (lower is better) Translates to: NKSLGANSKAFS*VRVYREQNSTL Trigger: CAGTGTGGAATTCTGCTCTCTGTAAACTCTTACTCATGAGAACGCTTTACTATTTGCACCTAAAGACTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
3UTR TCA 72 bp | AACAGATCCAACTTAAAAGAAAGGACTTACTGTATTTaGCAGTGTGAGAGGGCACTCTGTTATCATGGAGTA | + |
Preference number: 3 (lower is better) Translates to: NRSNLKERTYCI*QCERALCYHGV Trigger: TACTCCATGATAACAGAGTGCCCTCTCACACTGTCAAATACAGTAAGTCCTTTCTTTTAAGTTGGATCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCATTGGTCTCACCTCCGTACGCAGCACACTaGAGCGGTGTTCTTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: LALLGPSSHLRCLPLVSPPYAAH*SGVLPA Trigger: TGCAGGAAGAACACCGCTTCAGTGTGCTGCGTACGG...AGGTGAGACCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGCACTGCCAGGCCGGCTaGACCCAGCTGGGGAGCACC | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTEHCQAG*TQLGST Trigger: GGTGCTCCCCAGCTGGGTCCAGCCGGCCTGGCAGTG...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 72 bp | TCAGGGCTCTGGACTGTGTGGCTAGCAGGTGGCTGTTaGCTAGGGGTTGCGTCCTGCTTGCTGGCCTCATTC | + |
Preference number: 4 (lower is better) Translates to: SGLWTVWLAGGC*LGVASCLLASF Trigger: GAATGAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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3UTR CAA 72 bp | CCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTaGGAGCTGTTGCCACCTTCCCAGGATCTGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: PLRFSTEDVPWF*ELLPPSQDLGC Trigger: GCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGTTGCTGGCCTCATTCTaGGGGCTGGGTGGACAGGGG | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTELLASF*GLGGQG Trigger: CCCCTGTCCACCCAGCCCCCAGAATGAGGCCAGCAA...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCGCTGCCTGGCGCTGCTaGGCCCCTCCTCACACCTCC | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPAAWRC*APPHTS Trigger: GGAGGTGTGAGGAGGGGCCCAGCAGCGCCAGGCAGC...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACCAAAGTGCAGAGGTGTaGGGCCCTCGTAGTCTTGCC | + |
Preference number: 4 (lower is better) Translates to: VCDGGENSDQHRQLPPWHQSAEV*GPRSLA Trigger: GGCAAGACTACGAGGGCCGCACACCTCTGCACTTTG...GTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGCCGGCCTGACCCAGTaGACAAGGGCTGCCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALAGLTQ*TRAAWR Trigger: GCGCCAGGCAGCCCTTGTGCACTGGGTCAGGCCGGC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CGAAACAGCTCTTTCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTTTCACGGTGCTGACGTaGCCAGAAAGGGCAGCGGCG | + |
Preference number: 4 (lower is better) Translates to: RNSSFLLRSLWIISRRCSFTVLT*PERAAA Trigger: CGCCGCTGCCCTTTCTGGCCACGTCAGCACCGTGAA...AGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGGCCTGGACATCTGCCTaGAGGCCTGCTGTGTTCTGG | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTEAWTSA*RPAVFW Trigger: CCAGAACACAGCAGGCCTCCAGGCAGATGTCCAGGC...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGAAGCACCTCTGGGCCTaGCTGCCCTGTCCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTEKHLWA*LPCPVS Trigger: AGAGACAGGACAGGGCAGCCAGGCCCAGAGGTGCTT...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGATGGACCACTTGGGGCTCCTGTaGCGAGTGCTCAGGTGCAAA | + |
Preference number: 4 (lower is better) Translates to: VADEPLDGLFDVLLTEMDHLGLL*RVLRCK Trigger: TTTGCACCTGAGCACTCGGCACAGGAGCCCCAAGTG...GTCCATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGCTCTGCCTGGACATCTaGCTGGAGGCCTGCTGTGTT | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTELCLDI*LEACCV Trigger: AACACAGCAGGCCTCCAGGCAGATGTCCAGGCAGAG...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGTTGGGCTTCCTGGGGTaGTCCTGCTGGGAAGCACTT | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTELGFLG*SCWEAL Trigger: AAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAA...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 72 bp | TTCTCCACAGAGGATGTTCCCTGGTTCTTGGAGCTGTaGCCACCTTCCCAGGATCTGGGGTGCACACAGGCA | + |
Preference number: 4 (lower is better) Translates to: FSTEDVPWFLEL*PPSQDLGCTQA Trigger: TGCCTGTGTGCACCCCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACATCCTCTGTGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGATAACTTCACGGTGCTaGCGTGGCCAGAAAGGGCAG | + |
Preference number: 4 (lower is better) Translates to: LDDRRCLVFPSKQLFPASITSRC*RGQKGQ Trigger: CTGCCCTTTCTGGCCACGTCAGCACCGTGAAGTTAT...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | TTGGGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTTGCAACTGCAGGGCTGGAGTTGGATGTTGGGGTCTaGATTATTCTCCATGAGCAC | + |
Preference number: 4 (lower is better) Translates to: LGFLGWSCWEALATAGLELDVGV*IILHEH Trigger: GTGCTCATGGAGAATAATGCAGACCCCAACATCCAA...CTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCTCCCAGGATCTGGGGTaGACACAGGCAGAGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPSQDLG*TQAEGP Trigger: AGGCCCCTCTGCCTGTGTGCACCCCAGATCCTGGGA...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGTGCCTGAGCACTGAGTaGCTGGCATACTTTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTECLSTE*LAYFVA Trigger: GGCCACAAAGTATGCCAGGCACTCAGTGCTCAGGCA...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGCTGCTTCGTTCCCTCTaGATTATCAGCAGGCGCTGC | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTELLRSL*IISRRC Trigger: GCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAG...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGGCCTGGCATACTTTGTaGCCGACGAGCCTTTGGATG | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTEAWHTL*PTSLWM Trigger: CATCCAAAGGCTCGTCGGCCACAAAGTATGCCAGGC...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CTGGCGCTGCTGGGCCCCTCCTCACACCTCCGGTGTTTGCCATTGGTCTCACCTTGTACCTCTTTGTCTTaGATGTTGGGGTCTGCATTA | + |
Preference number: 4 (lower is better) Translates to: LALLGPSSHLRCLPLVSPCTSLS*MLGSAL Trigger: TAATGCAGACCCCAACATCCAAGACAAAGAGGTACA...AGGTGAGACCAATGGCAAACACCGGAGGTGTGAGGAGGGGCCCAGCAGCGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGGGTTGCGTCCTGCTTaGTGGCCTCATTCTGGGGGC | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALGLRPA*WPHSGG Trigger: GCCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACCAGTGCACAAGGGCTaGCTGGCGCTGCTGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGPVHKG*LALLGP Trigger: GGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCACTGG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTTCACGGTGCTGACGTaGCCAGAAAGGGCAGCGGCG | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALFTVLT*PERAAA Trigger: CGCCGCTGCCCTTTCTGGCCACGTCAGCACCGTGAA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GCAGGTGGCTGTTTGCTAGGGGTTGCGTCCTGCTTGCTGGCCTCATTCTGGGGGTTTTCTATCAGTATCTaGCAGACGTCAGCATTTCCC | + |
Preference number: 4 (lower is better) Translates to: AGGCLLGVASCLLASFWGFSISI*QTSAFP Trigger: GGGAAATGCTGACGTCTGCCAGATACTGATAGAAAA...CCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAGCCACCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGTGCACAAGGGCTGCCTaGCGCTGCTGGGCCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLCTRAA*RCWAPP Trigger: AGGAGGGGCCCAGCAGCGCCAGGCAGCCCTTGTGCA...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGAGTAAGGCTGCCCAGTaGAGTGGGGTTCGAAATAAG | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTESKAAQ*SGVRNK Trigger: CTTATTTCGAACCCCACTTCACTGGGCAGCCTTACT...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATGCCAAGCTCGCTGGATaGCCGCCGCTGCCTTGTTTT | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHAKLAG*PPLPCF Trigger: AAAACAAGGCAGCGGCGGTCATCCAGCGAGCTTGGC...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCACTTGGGGCTCCTGTaGCGAGTGCTCAGGTGCAAA | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPHLGLL*RVLRCK Trigger: TTTGCACCTGAGCACTCGGCACAGGAGCCCCAAGTG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCTGGGTGCGTCTTTTCTaGGAAGCACCTCTGGGCCTG | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPWVRLF*EAPLGL Trigger: CAGGCCCAGAGGTGCTTCGCAGAAAAGACGCACCCA...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATGGCTGCCCAGTGGAGTaGGATCTTGCCTTCCACGTC | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHGCPVE*DLAFHV Trigger: GACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCC...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCCTCATTCTGGGGGCTaGGTGGACAGGGGAGGACAG | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCPHSGG*VDRGGQ Trigger: CTGTCCTCCCCTGTCCACCCAGCCCCCAGAATGAGG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTTGCGTCCTGCTTGCTaGCCTCATTCTGGGGGCTGG | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHLRPAC*PHSGGW Trigger: CCAGCCCCCAGAATGAGGCCAGCAAGCAGGACGCAA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCTCTGCGAAGCACCTCTaGGCCTGGCTGCCCTGTCCT | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCSAKHL*AWLPCP Trigger: AGGACAGGGCAGCCAGGCCCAGAGGTGCTTCGCAGA...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 72 bp | ACTGAGTGCCTGGCATACTTTGTGGCCGACGAGCCTTaGGATGGACTCTTCGATGTCCTGCTTACTGAGATG | + |
Preference number: 4 (lower is better) Translates to: TECLAYFVADEP*DGLFDVLLTEM Trigger: CATCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCACAAAGTATGCCAGGCACTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATGAGACAGGTGCTTCCTaGGCTGGTAGCTTCGCCAAG | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHETGAS*AGSFAK Trigger: CTTGGCGAAGCTACCAGCTCAGGAAGCACCTGTCTC...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTGCCTTTATCTCCATTAACTaGAGCGGCATGAACCTGAGA | + |
Preference number: 4 (lower is better) Translates to: VTVERTLISTGNFPLGTAFISIN*SGMNLR Trigger: TCTCAGGTTCATGCCGCTGCAGTTAATGGAGATAAA...GGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGGTTGACATCTGCTCCTaGTTTGAGAAGAGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTEVDICS*FEKSIC Trigger: GCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAAC...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGCGCTCACCCGTTTTGTTGACATCTaGTCCTGCTTTGAGAAGAGC | + |
Preference number: 4 (lower is better) Translates to: DGQGTMFQHELDHLMALTRFVDI*SCFEKS Trigger: GCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACG...GGTGAGCGCCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | GTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTGCCATTGCCTTTTCCTGCTaGCCACATGAAAGATGTTCT | + |
Preference number: 4 (lower is better) Translates to: VTVERTLISTGNFPLGTAIAFSC*PHERCS Trigger: AGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAAT...GGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCAGGCAGAGGGGCCTCTaGAGTGCTCTATGGGTGTTT | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPRQRGL*SALWVF Trigger: AAACACCCATAGAGCACTGCAGAGGCCCCTCTGCCT...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCGGTTCTTGGAGCTGTTaGCACCTTCCCAGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPGSWSC*HLPRIW Trigger: CCAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACC...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCTGCTGGGAAGCACTTaGAACTGCAGGGCTGGAGTC | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHLLGST*NCRAGV Trigger: GACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGAAGAGCTAGACACTTaGGGCTCCTGTGCCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALEELDT*GSCAEC Trigger: GCACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTCGGGTCTTTGTGGTTaGCTGCCCAGTGGAGTGGGA | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHSGLCG*LPSGVG Trigger: TCCCACTCCACTGGGCAGCCAACCACAAAGACCCGA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTCTGGGTCAGGGCTCTaGACTGTGTGGCTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALSGSGL*TVWLAG Trigger: ACCTGCTAGCCACACAGTCCAGAGCCCTGACCCAGA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGAGGCCTGCTGTGTTCTaGGTCAGGGCTCTGGACTGT | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALRPAVF*VRALDC Trigger: ACAGTCCAGAGCCCTGACCCAGAACACAGCAGGCCT...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACCGGCTGGACCCAGCTaGGGAGCACCTGTCTCTGAG | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGPAGPS*GAPVSE Trigger: CTCAGAGACAGGTGCTCCCCAGCTGGGTCCAGCCGG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAAGGCAACTTCCCCCTTaGCACTGCCAGGCCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGRQLPP*HCQAGW Trigger: CCAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGCATACACTGTCCAGGTaGGGGGCCATGAGCCACGCC | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLHTLSR*GAMSHA Trigger: GGCGTGGCTCATGGCCCCCCACCTGGACAGTGTATG...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGTTCCAGAGTTTCCAACAATaGGTCTCTGAAGGGCACCTT | + |
Preference number: 4 (lower is better) Translates to: DDRRCLVFPSKQLFPASFQSFQQ*VSEGHL Trigger: AAGGTGCCCTTCAGAGACTCATTGTTGGAAACTCTG...GAACGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCCGTACGCAGCACACTaGAGCGGTGTTCTTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCPYAAH*SGVLPA Trigger: TGCAGGAAGAACACCGCTTCAGTGTGCTGCGTACGG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGCTCGGAAGGCTTTTCTaGCCTTGTATCCTTTGTAGA | + |
Preference number: 4 (lower is better) Translates to: PTLALQISMWLCSSSPTELGRLF*PCILCR Trigger: TCTACAAAGGATACAAGGTCAGAAAAGCCTTCCGAG...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCAAAGTGCAGAGGTGTaGGGCCCTCGTAGTCTTGCC | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCQSAEV*GPRSLA Trigger: GGCAAGACTACGAGGGCCGCACACCTCTGCACTTTG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGGTCATTGCCTTTTCCTaGTGCCCACATGAAAGATGT | + |
Preference number: 4 (lower is better) Translates to: LDDRRCLVFPSKQLFPASVIAFS*CPHERC Trigger: ACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGAC...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGACCTCTGGGCCTGGCTaGCCTGTCCTGTCTCTTATT | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALTSGPG*PVLSLI Trigger: AATAAGAGACAGGACAGGGCAGCCAGGCCCAGAGGT...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCTGGTTGGCTGCCCAGTaGAGTGGGATCTTGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCWLAAQ*SGILPS Trigger: GGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCA...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CGAAACAGCTCTTTCCTGCTTCGTTCCCTCTGGATTATCAGCAGGCGCTGCTCTACAGGCTCGGAACAGTaGAGTATGTTTCATGACGTC | + |
Preference number: 4 (lower is better) Translates to: RNSSFLLRSLWIISRRCSTGSEQ*SMFHDV Trigger: GACGTCATGAAACATACTCCACTGTTCCGAGCCTGT...AGAGCAGCGCCTGCTGATAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCGGGCTCTGGACTGTGTaGCTAGCAGGTGGCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCGLWTV*LAGGCL Trigger: CAAACAGCCACCTGCTAGCCACACAGTCCAGAGCCC...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCTGGGGTGGTCCTGCTaGGAAGCACTTGCAACTGCA | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCLGWSC*EALATA Trigger: TGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 72 bp | CTGAGTTGGTTGGTGCATTCTGCTGTAAGCCCTGTCTaGCTGACTTTTGGTGCTGTGCTAGCATTGGTGCCA | + |
Preference number: 4 (lower is better) Translates to: LSWLVHSAVSPV*LTFGAVLALVP Trigger: TGGCACCAATGCTAGCACAGCACCAAAAGTCAGCAAGACAGGGCTTACAGCAGAATGCACCAACCAACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCATAACTTCACGGTGCTaGCGTGGCCAGAAAGGGCAG | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCITSRC*RGQKGQ Trigger: CTGCCCTTTCTGGCCACGTCAGCACCGTGAAGTTAT...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CTGTTCGTGCTTCATGAGGAGGTTCTTCCGGTCTCGGAAGGCTTTTCTGACCTTGTGGAGTATGTTTCATaGCGTCAGTGGCATCCACTT | + |
Preference number: 4 (lower is better) Translates to: LFVLHEEVLPVSEGFSDLVEYVS*RQWHPL Trigger: AAGTGGATGCCACTGACGTCATGAAACATACTCCAC...AAGGTCAGAAAAGCCTTCCGAGACCGGAAGAACCTCCTCATGAAGCACGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCACACTTGGGTACATCTaGGCACTTCTCTGGCTCCAA | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPTLGYI*ALLWLQ Trigger: TTGGAGCCAGAGAAGTGCTCAGATGTACCCAAGTGT...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCAACTGTTCACTGAGCTaGGATGAAGCACAGCGGGGG | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCNCSLS*DEAQRG Trigger: CCCCCGCTGTGCTTCATCTCAGCTCAGTGAACAGTT...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TTTGCCATTGGTCTCACCTCTGCGCTTCTCCACAGAGGATGTTCCCTGGTTCTTTTTGAGAAGAGCATCTaGACAGTCCACTCTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: FAIGLTSALLHRGCSLVLFEKSI*TVHSVC Trigger: GCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAA...AAGAACCAGGGAACATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATGGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCAGTGGAGTGGGATCTTaGCTTCCACGTCGGGAATCC | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCSGVGS*LPRRES Trigger: GGATTCCCGACGTGGAAGGCAAGATCCCACTCCACT...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGCGCTCACCTTCACTGAAGGATGCTaGAAAAACACTTTGACCGTT | + |
Preference number: 4 (lower is better) Translates to: DGQGTMFQHELDHLMALTFTEGC*KNTLTV Trigger: AACGGTCAAAGTGTTTTTGCAGCATCCTTCAGTGAA...GGTGAGCGCCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTCCAGCTGCCCTTTCTaGTGTTCAGCTTCCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHSSCPF*CSASFL Trigger: GAGGAAGGAAGCTGAACAGCAGAAAGGGCAGCTGGA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCTGGATGACCGCCGCTaGCTTGTTTTTCCGTCGAAA | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHLDDRR*LVFPSK Trigger: TTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | AAAGACAATCTGAAGTCAAAGGATCATGGGAAAATTCATCCCATGCTGCCCCCAGAAGAGCTAGACACTTaGGGCTCCTGTGCCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: KDNLKSKDHGKIHPMLPPEELDT*GSCAEC Trigger: GCACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTC...TGGGGGCAGCATGGGATGAATTTTCCCATGATCCTTTGACTTCAGATTGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | CTGGATGACCGCCGCTGCCTTGTTTTTCCGTCGAAACAGCTCTTTCCTGCTTCGCTTTGTCTTGGATGTTaGGGTCTGCATTATTCTCCA | + |
Preference number: 4 (lower is better) Translates to: LDDRRCLVFPSKQLFPASLCLGC*GLHYSP Trigger: TGGAGAATAATGCAGACCCCAACATCCAAGACAAAG...CGAAGCAGGAAAGAGCTGTTTCGACGGAAAAACAAGGCAGCGGCGGTCATCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTGTCCTGTCTCTTATTaGGCTTCCTGGGGTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALCPVSY*ASWGGP Trigger: AGGACCACCCCAGGAAGCCCAATAAGAGACAGGACA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCTTTGAGAAGAGCATCTaGACAGTCCACTCTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPFEKSI*TVHSVC Trigger: GCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAA...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATAGCTGCGATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGTCTTCTAGATCCTTCTaGATCCAGTTTGCTCTTCGA | + |
Preference number: 4 (lower is better) Translates to: IAAMDRAPCSSMNWITSWSSRSF*IQFALR Trigger: TCGAAGAGCAAACTGGATGCAGAAGGATCTAGAAGA...CCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | ATAGCTGCGATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGCGTAAGACGTTATGTTaGAGCTTTCATAGGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: IAAMDRAPCSSMNWITSWRKTLC*SFHRRS Trigger: TGACCTCCTATGAAAGCTGCAACATAACGTCTTACG...CCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACTGTTTGCTAGGGGTTaGGTCCTGCTTGCTGGCCTC | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGLFARG*VLLAGL Trigger: GAGGCCAGCAAGCAGGACGCAACCCCTAGCAAACAG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCCACACCTCCGGTGTTTaGCATTGGTCTCACCTCTGC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCHTSGV*HWSHLC Trigger: GCAGAGGTGAGACCAATGGCAAACACCGGAGGTGTG...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCCCAAGCTGCTTCAAATaGAGAAGCCGAGACAGGTGC | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCPSCFK*RSRDRC Trigger: GCACCTGTCTCGGCTTCTGCATTTGAAGCAGCTTGG...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCACACAGTACATAAGTaGTGTTCTCCCAAACCGGTC | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPHTVHK*CSPKPV Trigger: GACCGGTTTGGGAGAACACCACTTATGTACTGTGTG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAGCACTCGGGTCTTTGTaGTTGGCTGCCCAGTGGAGT | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGALGSL*LAAQWS Trigger: ACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGC...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATAACTGGATCACCTCATaGCGCTCACCAAGCAATGCA | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHNWITS*RSPSNA Trigger: TGCATTGCTTGGTGAGCGCCATGAGGTGATCCAGTT...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGTGTGTGGCTAGCAGGTaGCTGTTTGCTAGGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLCVASR*LFARGC Trigger: GCAACCCCTAGCAAACAGCCACCTGCTAGCCACACA...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTTTCACTTGGCTTTCTaGAGGCCGTTCCCTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHFHLAF*RPFPEG Trigger: ACCTTCAGGGAACGGCCTCCAGAAAGCCAAGTGAAA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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3UTR CAA 72 bp | TTTGTAGACTGCTTGGATTTTGAAGGCAGCGATGTCTaGTATAGCTGCGATGGACAGGGCACCATGTTCCAG | + |
Preference number: 4 (lower is better) Translates to: FVDCLDFEGSDV*YSCDGQGTMFQ Trigger: CTGGAACATGGTGCCCTGTCCATCGCAGCTATACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCGGTCTTCTTTGTCTCTaGGAGCAGAGTTTCCAACAA | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPGLLCL*EQSFQQ Trigger: TTGTTGGAAACTCTGCTCTCAGAGACAAAGAAGACC...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | ACTTTGTGGCCGACGAGCCTTTGGATGGACTCTTCGATGTCCTGCTTACTGAGAAGAATCATCCTTCACTaGAGGATGCTGCAAAAACAC | + |
Preference number: 4 (lower is better) Translates to: TLWPTSLWMDSSMSCLLRRIILH*RMLQKH Trigger: GTGTTTTTGCAGCATCCTTCAGTGAAGGATGATTCT...TCTCAGTAAGCAGGACATCGAAGAGTCCATCCAAAGGCTCGTCGGCCACAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCGTTTTGTTGACATCTaGTCCTGCTTTGAGAAGAGC | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPRFVDI*SCFEKS Trigger: GCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
CDS-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCGTCTTTGTGGTTGGCTaGCCAGTGGAGTGGGATCTT | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCVFVVG*PVEWDL Trigger: AAGATCCCACTCCACTGGGCAGCCAACCACAAAGAC...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
CDS-3UTR CCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGCGTCCCTCTTTGTCTTaGATGTTGGGGTCTGCATTA | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALRPSLS*MLGSAL Trigger: TAATGCAGACCCCAACATCCAAGACAAAGAGGGACG...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAGCAGATGAACTGCAGTaGGATCTGGGAGGATCGGTG | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGADELQ*DLGGSV Trigger: CACCGATCCTCCCAGATCCCACTGCAGTTCATCTGC...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCTTCCCTGAAGGTCTATaGAAGAATCCCCTTGGGAGG | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCFPEGL*KNPLGR Trigger: CCTCCCAAGGGGATTCTTCCATAGACCTTCAGGGAA...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCTATGGGTGTTTCACTTaGCTTTCTGGAGGCCGTTCC | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCYGCFT*LSGGRS Trigger: GGAACGGCCTCCAGAAAGCCAAGTGAAACACCCATA...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCATGTTCCCTGGTTCTTaGAGCTGTTGCCACCTTCCC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCMFPGS*SCCHLP Trigger: GGGAAGGTGGCAACAGCTCCAAGAACCAGGGAACAT...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCGGTCACCTTGCTTCTTaGTGTGTGACGGTGGAGAGA | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCGHLAS*CVTVER Trigger: TCTCTCCACCGTCACACACCAAGAAGCAAGGTGACC...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCTATAAGCTTGTCCTaGGTCACCTTGCTTCTTGGT | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHPISLS*VTLLLG Trigger: ACCAAGAAGCAAGGTGACCCAGGACAAGCTTATAGG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCGATGTCCTGCTTACTaGGATGGACTTTGGGAATTT | + |
Preference number: 4 (lower is better) Translates to: EQWLTDLHYCFSVYISGHRCPAY*DGLWEF Trigger: AAATTCCCAAAGTCCATCTCAGTAAGCAGGACATCG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGATACATCTCACTGTGTaGACGGCACTCGGGTCTTTG | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLIHLTV*TALGSL Trigger: CAAAGACCCGAGTGCCGTGCACACAGTGAGATGTAT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGTCATTGCCTTTTCCTaGTGCCCACATGAAAGATGT | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALVIAFS*CPHERC Trigger: ACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGAC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCGCGCTCACCAAGCAATaGATAATCAAGGGGTGTGTA | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCALTKQ*IIKGCV Trigger: TACACACCCCTTGATTATGCATTGCTTGGTGAGCGC...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGATGTCTTGTATAGCTaGGATGGACAGGGCACCATG | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLDVLYS*DGQGTM Trigger: CATGGTGCCCTGTCCATCGCAGCTATACAAGACATC...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACAGGTGCAGATGAACTaGAGTGGGATCTGGGAGGAT | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGQVQMN*SGIWED Trigger: ATCCTCCCAGATCCCACTGCAGTTCATCTGCACCTG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAGAGGGGCCTCTGCAGTaGTCTATGGGTGTTTCACTT | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGEGPLQ*SMGVSL Trigger: AAGTGAAACACCCATAGAGCACTGCAGAGGCCCCTC...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGATCCGGTGTTTGCCATTaGTCTCACCTCTGCGCTTCT | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGSGVCH*SHLCAS Trigger: AGAAGCGCAGAGGTGAGACCAATGGCAAACACCGGA...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCCAGAGTTTCCAACAATaGGTCTCTGAAGGGCACCTT | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCQSFQQ*VSEGHL Trigger: AAGGTGCCCTTCAGAGACTCATTGTTGGAAACTCTG...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTTTATCTCCATTAACTaGAGCGGCATGAACCTGAGA | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALFISIN*SGMNLR Trigger: TCTCAGGTTCATGCCGCTGCAGTTAATGGAGATAAA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGATTTCCCTTTTGAGCTaGAAGGTGGAGGGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLISLLS*KVEGCS Trigger: AGAACAGCCCTCCACCTTGCAGCTCAAAAGGGAAAT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGCGTAAGACGTTATGTTaGAGCTTTCATAGGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALRKTLC*SFHRRS Trigger: TGACCTCCTATGAAAGCTGCAACATAACGTCTTACG...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCGAAACAGCTCTTTCCTaGTTCGTTCCCTCTGGATTA | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCETALS*FVPSGL Trigger: TAATCCAGAGGGAACGAAGCAGGAAAGAGCTGTTTC...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCTCAAGATGTATAGACTaGAAACTGTTCACTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: QWLTDLHYCFSVYISGHPSRCID*KLFTEL Trigger: CAGCTCAGTGAACAGTTTGCAGTCTATACATCTTGA...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | AGATTTGATGGGATGATGTCCTTTCCCTTCTTGAGAACAACCGTAGATCTGCCTCACACAGTACATAAGTaGTGTTCTCCCAAACCGGTC | + |
Preference number: 4 (lower is better) Translates to: RFDGMMSFPFLRTTVDLPHTVHK*CSPKPV Trigger: GACCGGTTTGGGAGAACACCACTTATGTACTGTGTG...AGGCAGATCTACGGTTGTTCTCAAGAAGGGAAAGGACATCATCCCATCAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGACAGGCTCGGAACAGTaGAGTATGTTTCATGACGTC | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLTGSEQ*SMFHDV Trigger: GACGTCATGAAACATACTCCACTGTTCCGAGCCTGT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGATGTTCCAGCATGAACTaGATCACCTCATGGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGCSSMN*ITSWRS Trigger: TGAGCGCCATGAGGTGATCCAGTTCATGCTGGAACA...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTGGACTTTGGGAATTTaGGTTCCAGTTCTTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCWTLGI*VPVLSS Trigger: GGAGGAAAGAACTGGAACTCAAATTCCCAAAGTCCA...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAAACCGTAGATCTGCCTaGGCACTGAGTGCCTGGCAT | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTNRRSA*ALSAWH Trigger: ATGCCAGGCACTCAGTGCTCAGGCAGATCTACGGTT...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGGTAAGAGAACTTCTTTaGTCTTCCACTGTTGTCAAG | + |
Preference number: 4 (lower is better) Translates to: FSVYISGHPQGPSILNALVRELL*SSTVVK Trigger: CTTGACAACAGTGGAAGATCAAAGAAGTTCTCTTAC...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | GTCTCGGAAGGCTTTTCTGACCTTGTATCCTTTGTAGACTGCTTGGATTTTGAAATTTCCCTTTTGAGCTaGAAGGTGGAGGGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: VSEGFSDLVSFVDCLDFEISLLS*KVEGCS Trigger: AGAACAGCCCTCCACCTTGCAGCTCAAAAGGGAAAT...TTCAAAATCCAAGCAGTCTACAAAGGATACAAGGTCAGAAAAGCCTTCCGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR GCA 90 bp | GAACCTTCCAAAACAGCAGCACTAGCTGGCAACCAACTGTTCAAATACCTATGCTCTTCTAGATCCTTCTaGATCCAGTTTGCTCTTCGA | + |
Preference number: 4 (lower is better) Translates to: EPSKTAALAGNQLFKYLCSSRSF*IQFALR Trigger: TCGAAGAGCAAACTGGATGCAGAAGGATCTAGAAGA...GCATAGGTATTTGAACAGTTGGTTGCCAGCTAGTGCTGCTGTTTTGGAAGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTTGGATGTTGGGGTCTaGATTATTCTCCATGAGCAC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCLDVGV*IILHEH Trigger: GTGCTCATGGAGAATAATGCAGACCCCAACATCCAA...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAGCCAGTCTCTGGAGATaGACAGATGTCCTCATAAAG | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGASLWR*TDVLIK Trigger: CTTTATGAGGACATCTGTGCATCTCCAGAGACTGGC...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACATCTTTCCTCCAAACCTaGAGGAGCAGGGCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTSFLQT*RSRAVH Trigger: GTGCACAGCCCTGCTCCTCCAGGTTTGGAGGAAAGA...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | GTCTCGGAAGGCTTTTCTGACCTTGTATCCTTTGTAGACTGCTTGGATTTTGAAGGTCTTCTTTGTCTCTaGGAGCAGAGTTTCCAACAA | + |
Preference number: 4 (lower is better) Translates to: VSEGFSDLVSFVDCLDFEGLLCL*EQSFQQ Trigger: TTGTTGGAAACTCTGCTCTCAGAGACAAAGAAGACC...TTCAAAATCCAAGCAGTCTACAAAGGATACAAGGTCAGAAAAGCCTTCCGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR TCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGAGAATCATCCTTCACTaGAGGATGCTGCAAAAACAC | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLRIILH*RMLQKH Trigger: GTGTTTTTGCAGCATCCTTCAGTGAAGGATGATTCT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCGTATCCTTTGTAGACTaGTTGGATTTTGAAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCVSFVD*LDFEGS Trigger: GCTGCCTTCAAAATCCAAGCAGTCTACAAAGGATAC...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACACATTGGTCTCACCTCTaGGCTTCTCCACAGAGGATG | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTHWSHL*ASPQRM Trigger: CATCCTCTGTGGAGAAGCGCAGAGGTGAGACCAATG...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACATGTCCTGGGTCACCTTaGTTCTTGGTGTGTGACGGT | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTCPGSP*FLVCDG Trigger: ACCGTCACACACCAAGAAGCAAGGTGACCCAGGACA...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTTTTCTATCAGTATCTaGCAGACGTCAGCATTTCCC | + |
Preference number: 4 (lower is better) Translates to: QLEEHILHIGNSFWDSPCFSISI*QTSAFP Trigger: GGGAAATGCTGACGTCTGCCAGATACTGATAGAAAA...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGCTTTGTCTTGGATGTTaGGGTCTGCATTATTCTCCA | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLLCLGC*GLHYSP Trigger: TGGAGAATAATGCAGACCCCAACATCCAAGACAAAG...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGTTCACTGAAGGATGCTaGAAAAACACTTTGACCGTT | + |
Preference number: 4 (lower is better) Translates to: RQGSPARRAYLTYRQQLLFTEGC*KNTLTV Trigger: AACGGTCAAAGTGTTTTTGCAGCATCCTTCAGTGAA...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR GCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAATTGCCTTTTCCTGCTaGCCACATGAAAGATGTTCT | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGIAFSC*PHERCS Trigger: AGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAAT...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAGTGGAGTATGTTTCATaGCGTCAGTGGCATCCACTT | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTVEYVS*RQWHPL Trigger: AAGTGGATGCCACTGACGTCATGAAACATACTCCAC...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGATCTACAGGAAGAAGGTaGATATTCATACACTGTCCA | + |
Preference number: 4 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGSTGRR*IFIHCP Trigger: TGGACAGTGTATGAATATTCACCTTCTTCCTGTAGA...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR TCA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAAGACTGCTTGGATTTTaGAGGCAGCGATGTCTTGTA | + |
Preference number: 4 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTRLLGF*RQRCLV Trigger: TACAAGACATCGCTGCCTTCAAAATCCAAGCAGTCT...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 90 bp | TGTGTGCACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTGGAGTaGGATCTTGCCTTCCACGTCGGGAATCCCGATGTTGGAGTCGTG | + |
Preference number: 5 (lower is better) Translates to: CVHGTRVFVVGCPVE*DLAFHVGNPDVGVV Trigger: CACGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 90 bp | CTCACTGTGTGCACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTaGAGTGGGATCTTGCCTTCCACGTCGGGAATCCCGATGTTGGAG | + |
Preference number: 5 (lower is better) Translates to: LTVCTALGSLWLAAQ*SGILPSTSGIPMLE Trigger: CTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 90 bp | GCGTCCAGGATACATCTCACTGTGTGCACGGCACTCGGGTCTTTGTaGTTGGCTGCCCAGTGGAGTGGGATCTTGCCTTCCACGTCGGGA | + |
Preference number: 5 (lower is better) Translates to: ASRIHLTVCTALGSL*LAAQWSGILPSTSG Trigger: TCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCTGGACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 90 bp | AGTAAAGACTCTGTCGGGGCAGCGTCCAGGATACATCTCACTGTGTaGACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTGGAGTGGG | + |
Preference number: 5 (lower is better) Translates to: SKDSVGAASRIHLTV*TALGSLWLAAQWSG Trigger: CCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCTGGACGCTGCCCCGACAGAGTCTTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 90 bp | CCAGGATACATCTCACTGTGTGCACGGCACTCGGGTCTTTGTGGTTaGCTGCCCAGTGGAGTGGGATCTTGCCTTCCACGTCGGGAATCC | + |
Preference number: 5 (lower is better) Translates to: PGYISLCARHSGLCG*LPSGVGSCLPRRES Trigger: GGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TTGGGCTTCCTGGGGTGGTCCTGCTGGGAAGCACTTGCAACTGCAGGGCTGGAGCGGCTATGGTCCGTTTaGTTGACATCTGCTCCTGCT | + |
Preference number: 5 (lower is better) Translates to: LGFLGWSCWEALATAGLERLWSV*LTSAPA Trigger: AGCAGGAGCAGATGTCAACAAAACGGACCATAGCCG...CTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGGACCACCCCAGGAAGCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS GCA 90 bp | GATACATCTCACTGTGTGCACGGCACTCGGGTCTTTGTGGTTGGCTaGCCAGTGGAGTGGGATCTTGCCTTCCACGTCGGGAATCCCGAT | + |
Preference number: 5 (lower is better) Translates to: DTSHCVHGTRVFVVG*PVEWDLAFHVGNPD Trigger: ATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 90 bp | CCACCACCGTTAGGTTTCCATCAGCGACAGCAAAGTGCAGAGGTGTaGGGCCCTCGTAGTCTTGCCAGTTCAGTAAAGACTCTGTCGGGG | + |
Preference number: 5 (lower is better) Translates to: PPPLGFHQRQQSAEV*GPRSLASSVKTLSG Trigger: CCCCGACAGAGTCTTTACTGAACTGGCAAGACTACGAGGGCCGCACACCTCTGCACTTTGCTGTCGCTGATGGAAACCTAACGGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGCTGTCCTGTCTCTTATaGGGCTTCCTGGGGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: PTLALQISMWLCSSSPTELSCLL*GFLGWS Trigger: GGACCACCCCAGGAAGCCCAATAAGAGACAGGACAG...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | GATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGCGCTCACCAGCACAGCCATACAGTaGATGTACCCTCCGTACGCA | + |
Preference number: 5 (lower is better) Translates to: DGQGTMFQHELDHLMALTSTAIQ*MYPPYA Trigger: TGCGTACGGAGGGTACATCAACTGTATGGCTGTGCT...GGTGAGCGCCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATGGGGTTGCGTCCTGCTaGCTGGCCTCATTCTGGGGG | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHGVASC*LASFWG Trigger: CCCCCAGAATGAGGCCAGCAAGCAGGACGCAACCCC...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGACGGCACTCGGGTCTTaGTGGTTGGCTGCCCAGTGG | + |
Preference number: 5 (lower is better) Translates to: FSVYISGHPQGPSILNALTALGS*WLAAQW Trigger: CCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGT...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCTAGCAGGTGGCTGTTaGCTAGGGGTTGCGTCCTGC | + |
Preference number: 5 (lower is better) Translates to: QWLTDLHYCFSVYISGHPLAGGC*LGVASC Trigger: GCAGGACGCAACCCCTAGCAAACAGCCACCTGCTAG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | GTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCCCCCTTGGCACTGCCGTGTACCTCTTTGTCTaGGATGTTGGGGTCTGCATT | + |
Preference number: 5 (lower is better) Translates to: VTVERTLISTGNFPLGTAVYLFV*DVGVCI Trigger: AATGCAGACCCCAACATCCAAGACAAAGAGGTACAC...GGCAGTGCCAAGGGGGAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS GCA 90 bp | GAGGGCTGTTCTCCGGCTATGGTCCGTTTTGTTGACATCTGCTCCTaGTTTGAGAAGAGCATCTGCACAGTCCACTCTGTCTGCCAACAC | + |
Preference number: 5 (lower is better) Translates to: EGCSPAMVRFVDICS*FEKSICTVHSVCQH Trigger: GTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCATAGCCGGAGAACAGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 90 bp | AAGGTGGAGGGCTGTTCTCCGGCTATGGTCCGTTTTGTTGACATCTaGTCCTGCTTTGAGAAGAGCATCTGCACAGTCCACTCTGTCTGC | + |
Preference number: 5 (lower is better) Translates to: KVEGCSPAMVRFVDI*SCFEKSICTVHSVC Trigger: GCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCATAGCCGGAGAACAGCCCTCCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 90 bp | GGGGCCATAAACTTCAGCAGAAGAGCTAGACACTTGGGGCTCCTGTaGCGAGTGCTCAGGTGCAAAGGTGTCATCTCTTCTAGATCCTTC | + |
Preference number: 5 (lower is better) Translates to: GAINFSRRARHLGLL*RVLRCKGVISSRSF Trigger: GAAGGATCTAGAAGAGATGACACCTTTGCACCTGAGCACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTCTGCTGAAGTTTATGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGCCTGCTGGGAAGCACTaGCAACTGCAGGGCTGGAGT | + |
Preference number: 5 (lower is better) Translates to: FSVYISGHPQGPSILNALPAGKH*QLQGWS Trigger: ACTCCAGCCCTGCAGTTGCAAGTGCTTCCCAGCAGG...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | ATAGCTGCGATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGGCAGCGTCCTTGTTTTaGTCCTGTGTATCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: IAAMDRAPCSSMNWITSWAASLF*SCVSTS Trigger: GGAGGTGGATACACAGGACAAAAACAAGGACGCTGC...CCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS GCA 90 bp | AGCAGAAGAGCTAGACACTTGGGGCTCCTGTGCCGAGTGCTCAGGTaGAAAGGTGTCATCTCTTCTAGATCCTTCTGCATCCAGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: SRRARHLGLLCRVLR*KGVISSRSFCIQFA Trigger: AGCAAACTGGATGCAGAAGGATCTAGAAGAGATGACACCTTTGCACCTGAGCACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | CTTGCTTCTTGGTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCGCGATAATTTCCCTTTaGAGCTGCAAGGTGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: LASWCVTVERTLISTGNFAIISL*SCKVEG Trigger: GCCCTCCACCTTGCAGCTCAAAAGGGAAATTATCGC...GAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACACCAAGAAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATAGAAGAGCTAGACACTaGGGGCTCCTGTGCCGAGTG | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHRRARH*GLLCRV Trigger: CACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTCT...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TTTCCTCAGCTGTTCGTGCTTCATGAGGAGGTTCTTCCGGTCTCGGAAGGCTTTGGGGTGTGTACCTCTTaGTCTTGGATGTTGGGGTCT | + |
Preference number: 5 (lower is better) Translates to: FPQLFVLHEEVLPVSEGFGVCTS*SWMLGS Trigger: AGACCCCAACATCCAAGACAAAGAGGTACACACCCC...AAAGCCTTCCGAGACCGGAAGAACCTCCTCATGAAGCACGAACAGCTGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS GCA 90 bp | GACCGTTTCAGCAAAGTTACTCTGAGCTGCATAGTGCAAGGGTGTTaGTCCCTGGCTGTCCGAAGGGATCGTTCCAGACTTGTTTCTTTC | + |
Preference number: 5 (lower is better) Translates to: DRFSKVTLSCIVQGC*SLAVRRDRSRLVSF Trigger: GAAAGAAACAAGTCTGGAACGATCCCTTCGGACAGCCAGGGAGCAACACCCTTGCACTATGCAGCTCAGAGTAACTTTGCTGAAACGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | CTTGCTTCTTGGTGTGTGACGGTGGAGAGAACTCTGATCAGCACAGGCAACTTCACATCTGCTCCTGCTTaGAGAAGAGCATCTGCACAG | + |
Preference number: 5 (lower is better) Translates to: LASWCVTVERTLISTGNFTSAPA*RRASAQ Trigger: CTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGT...GAAGTTGCCTGTGCTGATCAGAGTTCTCTCCACCGTCACACACCAAGAAGCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCGGCTATGGTCCGTTTaGTTGACATCTGCTCCTGCT | + |
Preference number: 5 (lower is better) Translates to: QWLTDLHYCFSVYISGHPRLWSV*LTSAPA Trigger: AGCAGGAGCAGATGTCAACAAAACGGACCATAGCCG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | CCCACCCTGGCACTTCAGATTTCTATGTGGCTGTGCTCATCCAGTCCCACTGAGTCAGCTTCCTTCCTCTaGTTTTCCTCTTCCCGTTTT | + |
Preference number: 5 (lower is better) Translates to: PTLALQISMWLCSSSPTESASFL*FSSSRF Trigger: AAAACGGGAAGAGGAAAACAAGAGGAAGGAAGCTGA...CTCAGTGGGACTGGATGAGCACAGCCACATAGAAATCTGAAGTGCCAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTATGGAAGAATCCCCTaGGGAGGCTCTGCCTGGACA | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHYGRIP*GGSAWT Trigger: TGTCCAGGCAGAGCCTCCCAAGGGGATTCTTCCATA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCTATGGGTGTTTCACTaGGCTTTCTGGAGGCCGTTC | + |
Preference number: 5 (lower is better) Translates to: QWLTDLHYCFSVYISGHPLWVFH*AFWRPF Trigger: GAACGGCCTCCAGAAAGCCAAGTGAAACACCCATAG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTGGTTCTTGGAGCTGTaGCCACCTTCCCAGGATCTG | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHWFLEL*PPSQDL Trigger: CAGATCCTGGGAAGGTGGCAACAGCTCCAAGAACCA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 90 bp | ATCTGCTCCTGCTTTGAGAAGAGCATCTGCACAGTCCACTCTGTCTaGCAACACACAGTACATAAGTGGTGTTCTCCCAAACCGGTCTTC | + |
Preference number: 5 (lower is better) Translates to: ICSCFEKSICTVHSV*QHTVHKWCSPKPVF Trigger: GAAGACCGGTTTGGGAGAACACCACTTATGTACTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 90 bp | CCAGTGCAAAGCTGTTCGTCCCTCTTTGTCTTGGATGTTGGGGTCTaGATTATTCTCCATGAGCACAGCCATACAGTTGATGTACCCTCC | + |
Preference number: 5 (lower is better) Translates to: PVQSCSSLFVLDVGV*IILHEHSHTVDVPS Trigger: GGAGGGTACATCAACTGTATGGCTGTGCTCATGGAGAATAATGCAGACCCCAACATCCAAGACAAAGAGGGACGAACAGCTTTGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TTTCCTCAGCTGTTCGTGCTTCATGAGGAGGTTCTTCCGGTCTCGGAAGGCTTTCCAAACCGGTCTTCTTaGTCTCTGAGAGCAGAGTTT | + |
Preference number: 5 (lower is better) Translates to: FPQLFVLHEEVLPVSEGFPNRSS*SLRAEF Trigger: AAACTCTGCTCTCAGAGACAAAGAAGACCGGTTTGG...AAAGCCTTCCGAGACCGGAAGAACCTCCTCATGAAGCACGAACAGCTGAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | AAAGACAATCTGAAGTCAAAGGATCATGGGAAAATTCATCCCATGCTGCCCCCAAGAAGAGCTAGACACTaGGGGCTCCTGTGCCGAGTG | + |
Preference number: 5 (lower is better) Translates to: KDNLKSKDHGKIHPMLPPRRARH*GLLCRV Trigger: CACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTCT...TGGGGGCAGCATGGGATGAATTTTCCCATGATCCTTTGACTTCAGATTGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTCGGGAATCCCGATGTaGGAGTCGTGCTTGATGAGT | + |
Preference number: 5 (lower is better) Translates to: FSVYISGHPQGPSILNALSGIPM*ESCLMS Trigger: ACTCATCAAGCACGACTCCAACATCGGGATTCCCGA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATAGCACAGCCATACAGTaGATGTACCCTCCGTACGCA | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHSTAIQ*MYPPYA Trigger: TGCGTACGGAGGGTACATCAACTGTATGGCTGTGCT...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | ATAGCTGCGATGGACAGGGCACCATGTTCCAGCATGAACTGGATCACCTCATGGTCTTTGTCTTGGATGTaGGGGTCTGCATTATTCTCC | + |
Preference number: 5 (lower is better) Translates to: IAAMDRAPCSSMNWITSWSLSWM*GSALFS Trigger: GGAGAATAATGCAGACCCCAACATCCAAGACAAAGA...CCATGAGGTGATCCAGTTCATGCTGGAACATGGTGCCCTGTCCATCGCAGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTCCTCTTCCCGTTTTTaGGCTGCAGCGTCTTTCCTC | + |
Preference number: 5 (lower is better) Translates to: FSVYISGHPQGPSILNALSSSRF*AAASFL Trigger: GAGGAAAGACGCTGCAGCCAAAAAACGGGAAGAGGA...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACACAGGCAACTTCCCCCTaGGCACTGCCAGGCCGGCTG | + |
Preference number: 5 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTQATSP*ALPGRL Trigger: CAGCCGGCCTGGCAGTGCCAAGGGGGAAGTTGCCTG...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGACCCCTCCTATAAGCTaGTCCTGGGTCACCTTGCTT | + |
Preference number: 5 (lower is better) Translates to: FSVYISGHPQGPSILNALTPPIS*SWVTLL Trigger: AAGCAAGGTGACCCAGGACAAGCTTATAGGAGGGGT...CAATGCATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACACGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS TCA 90 bp | GCTCGGAACAGTGGAGTATGTTTCATGACGTCAGTGGCATCCACTTaGGCATCATTGTCCAATAATAACTTCACGGTGCTGACGTGGCCA | + |
Preference number: 5 (lower is better) Translates to: ARNSGVCFMTSVAST*ASLSNNNFTVLTWP Trigger: TGGCCACGTCAGCACCGTGAAGTTATTATTGGACAATGATGCTCAAGTGGATGCCACTGACGTCATGAAACATACTCCACTGTTCCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CCA 90 bp | AGCATCTGCACAGTCCACTCTGTCTGCCAACACACAGTACATAAGTaGTGTTCTCCCAAACCGGTCTTCTTTGTCTCTGAGAGCAGAGTT | + |
Preference number: 5 (lower is better) Translates to: SICTVHSVCQHTVHK*CSPKPVFFVSESRV Trigger: AACTCTGCTCTCAGAGACAAAGAAGACCGGTTTGGGAGAACACCACTTATGTACTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CCA 90 bp | CGTCTGAATCACATCTCTGTGTCCCATCTCACAGGCTCGGAACAGTaGAGTATGTTTCATGACGTCAGTGGCATCCACTTGAGCATCATT | + |
Preference number: 5 (lower is better) Translates to: RLNHISVSHLTGSEQ*SMFHDVSGIHLSII Trigger: AATGATGCTCAAGTGGATGCCACTGACGTCATGAAACATACTCCACTGTTCCGAGCCTGTGAGATGGGACACAGAGATGTGATTCAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | CAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCCCCAGTGCAGAGCTGTTaGCTTGTTTTTGTCCTGTGT | + |
Preference number: 5 (lower is better) Translates to: QWLTDLHYCFSVYISGHPPVQSC*LVFVLC Trigger: ACACAGGACAAAAACAAGCAAACAGCTCTGCACTGG...GGGATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 90 bp | ATGGTCCGTTTTGTTGACATCTGCTCCTGCTTTGAGAAGAGCATCTaGACAGTCCACTCTGTCTGCCAACACACAGTACATAAGTGGTGT | + |
Preference number: 5 (lower is better) Translates to: MVRFVDICSCFEKSI*TVHSVCQHTVHKWC Trigger: ACACCACTTATGTACTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATCCAAACCGGTCTTCTTaGTCTCTGAGAGCAGAGTTT | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHPNRSS*SLRAEF Trigger: AAACTCTGCTCTCAGAGACAAAGAAGACCGGTTTGG...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | CAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCGCGATAATTTCCCTTTaGAGCTGCAAGGTGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: QLEEHILHIGNSFWDSPCAIISL*SCKVEG Trigger: GCCCTCCACCTTGCAGCTCAAAAGGGAAATTATCGC...GCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGGAAGGCAGCGATGTCTaGTATAGCTGCGATGGACAG | + |
Preference number: 5 (lower is better) Translates to: RQGSPARRAYLTYRQQLLEGSDV*YSCDGQ Trigger: CTGTCCATCGCAGCTATACAAGACATCGCTGCCTTC...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS TCA 90 bp | CTCTGTGTCCCATCTCACAGGCTCGGAACAGTGGAGTATGTTTCATaGCGTCAGTGGCATCCACTTGAGCATCATTGTCCAATAATAACT | + |
Preference number: 5 (lower is better) Translates to: LCVPSHRLGTVEYVS*RQWHPLEHHCPIIT Trigger: AGTTATTATTGGACAATGATGCTCAAGTGGATGCCACTGACGTCATGAAACATACTCCACTGTTCCGAGCCTGTGAGATGGGACACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS TCA 90 bp | CACACTGAAGCGGTGTTCTTCCTGCATAATCCTGCACGTTTGGGTTaGTCTTATTTTCTATCAGTATCTGGCAGACGTCAGCATTTCCCC | + |
Preference number: 5 (lower is better) Translates to: HTEAVFFLHNPARLG*SYFLSVSGRRQHFP Trigger: GGGGAAATGCTGACGTCTGCCAGATACTGATAGAAAATAAGATCAACCCAAACGTGCAGGATTATGCAGGAAGAACACCGCTTCAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CCA 90 bp | CGCAGCACACTGAAGCGGTGTTCTTCCTGCATAATCCTGCACGTTTaGGTTGATCTTATTTTCTATCAGTATCTGGCAGACGTCAGCATT | + |
Preference number: 5 (lower is better) Translates to: RSTLKRCSSCIILHV*VDLIFYQYLADVSI Trigger: AATGCTGACGTCTGCCAGATACTGATAGAAAATAAGATCAACCCAAACGTGCAGGATTATGCAGGAAGAACACCGCTTCAGTGTGCTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | GAGCAGTGGCTTACAGACTTACATTACTGCTTCAGCGTGTACATCAGTGGCCATTCTTTGTCTTGGATGTaGGGGTCTGCATTATTCTCC | + |
Preference number: 5 (lower is better) Translates to: EQWLTDLHYCFSVYISGHSLSWM*GSALFS Trigger: GGAGAATAATGCAGACCCCAACATCCAAGACAAAGA...ATGGCCACTGATGTACACGCTGAAGCAGTAATGTAAGTCTGTAAGCCACTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
||
CDS GCA 90 bp | CCCAGTGAAGTGGGGTTCGAAATAAGTTATCGTAAGACGTTATGTTaGAGCTTTCATAGGAGGTCAAGACATCCACCACCGTTAGGTTTC | + |
Preference number: 5 (lower is better) Translates to: PSEVGFEISYRKTLC*SFHRRSRHPPPLGF Trigger: GAAACCTAACGGTGGTGGATGTCTTGACCTCCTATGAAAGCTGCAACATAACGTCTTACGATAACTTATTTCGAACCCCACTTCACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 90 bp | GTTGATGTACCCTCCGTACGCAGCACACTGAAGCGGTGTTCTTCCTaGATAATCCTGCACGTTTGGGTTGATCTTATTTTCTATCAGTAT | + |
Preference number: 5 (lower is better) Translates to: VDVPSVRSTLKRCSS*IILHVWVDLIFYQY Trigger: ATACTGATAGAAAATAAGATCAACCCAAACGTGCAGGATTATGCAGGAAGAACACCGCTTCAGTGTGCTGCGTACGGAGGGTACATCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGATCGTCCCTCTTTGTCTaGGATGTTGGGGTCTGCATT | + |
Preference number: 5 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGSSLFV*DVGVCI Trigger: AATGCAGACCCCAACATCCAAGACAAAGAGGGACGA...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGACTATGGTCCGTTTTGTaGACATCTGCTCCTGCTTTG | + |
Preference number: 5 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGLWSVL*TSAPAL Trigger: CAAAGCAGGAGCAGATGTCAACAAAACGGACCATAG...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | ATCTTACATATAGGCAACAGCTTTTGGGATAGCCCTTGCTCCAGTTATTCAGGAGCTGTTTGCTTGTTTTaGTCCTGTGTATCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: ILHIGNSFWDSPCSSYSGAVCLF*SCVSTS Trigger: GGAGGTGGATACACAGGACAAAAACAAGCAAACAGC...TCCTGAATAACTGGAGCAAGGGCTATCCCAAAAGCTGTTGCCTATATGTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | AGACAAGGCAGCCCAGCTAGAAGAGCATATCTTACATATAGGCAACAGCTTTTGATGGACTTTGGGAATTaGAGTTCCAGTTCTTTCCTC | + |
Preference number: 5 (lower is better) Translates to: RQGSPARRAYLTYRQQLLMDFGN*SSSSFL Trigger: GAGGAAAGAACTGGAACTCAAATTCCCAAAGTCCAT...CAAAAGCTGTTGCCTATATGTAAGATATGCTCTTCTAGCTGGGCTGCCTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS TCA 90 bp | CCACATGAAAGATGTTCTTCCTTCCAGGTCAGAATCATCCTTCACTaGAGGATGCTGCAAAAACACTTTGACCGTTTCAGCAAAGTTACT | + |
Preference number: 5 (lower is better) Translates to: PHERCSSFQVRIILH*RMLQKHFDRFSKVT Trigger: AGTAACTTTGCTGAAACGGTCAAAGTGTTTTTGCAGCATCCTTCAGTGAAGGATGATTCTGACCTGGAAGGAAGAACATCTTTCATGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS-3UTR CAA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAACATCTGCTCCTGCTTaGAGAAGAGCATCTGCACAG | + |
Preference number: 5 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTTSAPA*RRASAQ Trigger: CTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGT...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACATCCTTTGTAGACTGCTaGGATTTTGAAGGCAGCGAT | + |
Preference number: 5 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTSFVDC*DFEGSD Trigger: ATCGCTGCCTTCAAAATCCAAGCAGTCTACAAAGGA...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS-3UTR CAA 90 bp | TGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTGTTCATGCACAGCTTTGGCTTGTTTTTaGATTGACTGGATGGTTGCA | + |
Preference number: 5 (lower is better) Translates to: CIKEAPWYLLFEVNCSCTALACF*IDWMVA Trigger: TGCAACCATCCAGTCAATCAAAAAACAAGCCAAAGC...TGTGCATGAACAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 72 bp | CACTGTGTGCACGGCACTCGGGTCTTTGTGGTTGGCTaGCCAGTGGAGTGGGATCTTGCCTTCCACGTCGGG | + |
Preference number: 6 (lower is better) Translates to: HCVHGTRVFVVG*PVEWDLAFHVG Trigger: CCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 72 bp | TGCACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTaGAGTGGGATCTTGCCTTCCACGTCGGGAATCCCG | + |
Preference number: 6 (lower is better) Translates to: CTALGSLWLAAQ*SGILPSTSGIP Trigger: CGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 72 bp | TCTGTCGGGGCAGCGTCCAGGATACATCTCACTGTGTaGACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAG | + |
Preference number: 6 (lower is better) Translates to: SVGAASRIHLTV*TALGSLWLAAQ Trigger: CTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCTGGACGCTGCCCCGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 90 bp | GCAGCGTCCAGGATACATCTCACTGTGTGCACGGCACTCGGGTCTTaGTGGTTGGCTGCCCAGTGGAGTGGGATCTTGCCTTCCACGTCG | + |
Preference number: 6 (lower is better) Translates to: AASRIHLTVCTALGS*WLAAQWSGILPSTS Trigger: CGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCTGGACGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 72 bp | GGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTGGAGTaGGATCTTGCCTTCCACGTCGGGAATCCCGATGTT | + |
Preference number: 6 (lower is better) Translates to: GTRVFVVGCPVE*DLAFHVGNPDV Trigger: AACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 72 bp | GGGTCTTTGTGGTTGGCTGCCCAGTGGAGTGGGATCTaGCCTTCCACGTCGGGAATCCCGATGTTGGAGTCG | + |
Preference number: 6 (lower is better) Translates to: GSLWLAAQWSGI*PSTSGIPMLES Trigger: CGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 90 bp | GCCCAGTGGAGTGGGATCTTGCCTTCCACGTCGGGAATCCCGATGTaGGAGTCGTGCTTGATGAGTAGCTTCGCGTGCTCGGGGTTGTTG | + |
Preference number: 6 (lower is better) Translates to: AQWSGILPSTSGIPM*ESCLMSSFACSGLL Trigger: CAACAACCCCGAGCACGCGAAGCTACTCATCAAGCACGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 90 bp | ACGGCACTCGGGTCTTTGTGGTTGGCTGCCCAGTGGAGTGGGATCTaGCCTTCCACGTCGGGAATCCCGATGTTGGAGTCGTGCTTGATG | + |
Preference number: 6 (lower is better) Translates to: TALGSLWLAAQWSGI*PSTSGIPMLESCLM Trigger: CATCAAGCACGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 72 bp | GGTCTTTGTGGTTGGCTGCCCAGTGGAGTGGGATCTTaGCTTCCACGTCGGGAATCCCGATGTTGGAGTCGT | + |
Preference number: 6 (lower is better) Translates to: GLCGWLPSGVGS*LPRRESRCWSR Trigger: ACGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 72 bp | ATCTCACTGTGTGCACGGCACTCGGGTCTTTGTGGTTaGCTGCCCAGTGGAGTGGGATCTTGCCTTCCACGT | + |
Preference number: 6 (lower is better) Translates to: ISLCARHSGLCG*LPSGVGSCLPR Trigger: ACGTGGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 72 bp | ATACATCTCACTGTGTGCACGGCACTCGGGTCTTTGTaGTTGGCTGCCCAGTGGAGTGGGATCTTGCCTTCC | + |
Preference number: 6 (lower is better) Translates to: IHLTVCTALGSL*LAAQWSGILPS Trigger: GGAAGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 72 bp | AGTGGGATCTTGCCTTCCACGTCGGGAATCCCGATGTaGGAGTCGTGCTTGATGAGTAGCTTCGCGTGCTCG | + |
Preference number: 6 (lower is better) Translates to: SGILPSTSGIPM*ESCLMSSFACS Trigger: CGAGCACGCGAAGCTACTCATCAAGCACGACTCCAACATCGGGATTCCCGACGTGGAAGGCAAGATCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CAA 72 bp | AGGATACATCTCACTGTGTGCACGGCACTCGGGTCTTaGTGGTTGGCTGCCCAGTGGAGTGGGATCTTGCCT | + |
Preference number: 6 (lower is better) Translates to: RIHLTVCTALGS*WLAAQWSGILP Trigger: AGGCAAGATCCCACTCCACTGGGCAGCCAACCACAAAGACCCGAGTGCCGTGCACACAGTGAGATGTATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 72 bp | GCAGAAGAGCTAGACACTTGGGGCTCCTGTGCCGAGTaGTCAGGTGCAAAGGTGTCATCTCTTCTAGATCCT | + |
Preference number: 6 (lower is better) Translates to: AEELDTWGSCAE*SGAKVSSLLDP Trigger: AGGATCTAGAAGAGATGACACCTTTGCACCTGAGCACTCGGCACAGGAGCCCCAAGTGTCTAGCTCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | CAGCAAAGTTACTCTGAGCTGCATAGTGCAAGGGTGTaGCTCCCTGGCTGTCCGAAGGGATCGTTCCAGACT | + |
Preference number: 6 (lower is better) Translates to: QQSYSELHSARV*LPGCPKGSFQT Trigger: AGTCTGGAACGATCCCTTCGGACAGCCAGGGAGCAACACCCTTGCACTATGCAGCTCAGAGTAACTTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | AGCAAAGTTACTCTGAGCTGCATAGTGCAAGGGTGTTaGTCCCTGGCTGTCCGAAGGGATCGTTCCAGACTT | + |
Preference number: 6 (lower is better) Translates to: SKVTLSCIVQGC*SLAVRRDRSRL Trigger: AAGTCTGGAACGATCCCTTCGGACAGCCAGGGAGCAACACCCTTGCACTATGCAGCTCAGAGTAACTTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | CAGCATCGTCCTGAGCACGTCGTCATTGCCTTTTCCTaGTGCCCACATGAAAGATGTTCTTCCTTCCAGGTC | + |
Preference number: 6 (lower is better) Translates to: QHRPEHVVIAFS*CPHERCSSFQV Trigger: GACCTGGAAGGAAGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGACGACGTGCTCAGGACGATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CCA 72 bp | GCATCATTGTCCAATAATAACTTCACGGTGCTGACGTaGCCAGAAAGGGCAGCGGCGTGTAAAGCTGTGCCT | + |
Preference number: 6 (lower is better) Translates to: ASLSNNNFTVLT*PERAAACKAVP Trigger: AGGCACAGCTTTACACGCCGCTGCCCTTTCTGGCCACGTCAGCACCGTGAAGTTATTATTGGACAATGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | AGGTGGAGGGCTGTTCTCCGGCTATGGTCCGTTTTGTaGACATCTGCTCCTGCTTTGAGAAGAGCATCTGCA | + |
Preference number: 6 (lower is better) Translates to: RWRAVLRLWSVL*TSAPALRRASA Trigger: TGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCATAGCCGGAGAACAGCCCTCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 90 bp | GCTGTTCTCCGGCTATGGTCCGTTTTGTTGACATCTGCTCCTGCTTaGAGAAGAGCATCTGCACAGTCCACTCTGTCTGCCAACACACAG | + |
Preference number: 6 (lower is better) Translates to: AVLRLWSVLLTSAPA*RRASAQSTLSANTQ Trigger: CTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCATAGCCGGAGAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | TCTCCGGCTATGGTCCGTTTTGTTGACATCTGCTCCTaGTTTGAGAAGAGCATCTGCACAGTCCACTCTGTC | + |
Preference number: 6 (lower is better) Translates to: SPAMVRFVDICS*FEKSICTVHSV Trigger: GACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAAACGGACCATAGCCGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | TTAGGTTTCCATCAGCGACAGCAAAGTGCAGAGGTGTaGGGCCCTCGTAGTCTTGCCAGTTCAGTAAAGACT | + |
Preference number: 6 (lower is better) Translates to: LGFHQRQQSAEV*GPRSLASSVKT Trigger: AGTCTTTACTGAACTGGCAAGACTACGAGGGCCGCACACCTCTGCACTTTGCTGTCGCTGATGGAAACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | CATCGTCCTGAGCACGTCGTCATTGCCTTTTCCTGCTaGCCACATGAAAGATGTTCTTCCTTCCAGGTCAGA | + |
Preference number: 6 (lower is better) Translates to: HRPEHVVIAFSC*PHERCSSFQVR Trigger: TCTGACCTGGAAGGAAGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGACGACGTGCTCAGGACGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CCA 72 bp | CACATCTCTGTGTCCCATCTCACAGGCTCGGAACAGTaGAGTATGTTTCATGACGTCAGTGGCATCCACTTG | + |
Preference number: 6 (lower is better) Translates to: HISVSHLTGSEQ*SMFHDVSGIHL Trigger: CAAGTGGATGCCACTGACGTCATGAAACATACTCCACTGTTCCGAGCCTGTGAGATGGGACACAGAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 90 bp | TCGATGTCTGACTTTAGACTCAGCATCGTCCTGAGCACGTCGTCATaGCCTTTTCCTGCTGCCCACATGAAAGATGTTCTTCCTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: SMSDFRLSIVLSTSS*PFPAAHMKDVLPSR Trigger: CCTGGAAGGAAGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGACGACGTGCTCAGGACGATGCTGAGTCTAAAGTCAGACATCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS TCA 72 bp | CCATCTCACAGGCTCGGAACAGTGGAGTATGTTTCATaGCGTCAGTGGCATCCACTTGAGCATCATTGTCCA | + |
Preference number: 6 (lower is better) Translates to: PSHRLGTVEYVS*RQWHPLEHHCP Trigger: TGGACAATGATGCTCAAGTGGATGCCACTGACGTCATGAAACATACTCCACTGTTCCGAGCCTGTGAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | CCCTCCGTACGCAGCACACTGAAGCGGTGTTCTTCCTaGATAATCCTGCACGTTTGGGTTGATCTTATTTTC | + |
Preference number: 6 (lower is better) Translates to: PSVRSTLKRCSS*IILHVWVDLIF Trigger: GAAAATAAGATCAACCCAAACGTGCAGGATTATGCAGGAAGAACACCGCTTCAGTGTGCTGCGTACGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | GTTGCTCCCTGGCTGTCCGAAGGGATCGTTCCAGACTaGTTTCTTTCTAGAAGGAGATGGACAATCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: VAPWLSEGIVPD*FLSRRRWTICA Trigger: TGCACAGATTGTCCATCTCCTTCTAGAAAGAAACAAGTCTGGAACGATCCCTTCGGACAGCCAGGGAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | GAAAGGGCAGCGGCGTGTAAAGCTGTGCCTCCGTACTaGTCCGACATGTTAATGTCGATGTCTGACTTTAGA | + |
Preference number: 6 (lower is better) Translates to: ERAAACKAVPPY*SDMLMSMSDFR Trigger: TCTAAAGTCAGACATCGACATTAACATGTCGGACAAGTACGGAGGCACAGCTTTACACGCCGCTGCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | CATGAACTGGATCACCTCATGGCGCTCACCAAGCAATaGATAATCAAGGGGTGTGTACCTCTCCTCATTGTT | + |
Preference number: 6 (lower is better) Translates to: HELDHLMALTKQ*IIKGCVPLLIV Trigger: AACAATGAGGAGAGGTACACACCCCTTGATTATGCATTGCTTGGTGAGCGCCATGAGGTGATCCAGTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS CCA 72 bp | ACAGTCCACTCTGTCTGCCAACACACAGTACATAAGTaGTGTTCTCCCAAACCGGTCTTCTTTGTCTCTGAG | + |
Preference number: 6 (lower is better) Translates to: TVHSVCQHTVHK*CSPKPVFFVSE Trigger: CTCAGAGACAAAGAAGACCGGTTTGGGAGAACACCACTTATGTACTGTGTGTTGGCAGACAGAGTGGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | GACTTTAGACTCAGCATCGTCCTGAGCACGTCGTCATaGCCTTTTCCTGCTGCCCACATGAAAGATGTTCTT | + |
Preference number: 6 (lower is better) Translates to: DFRLSIVLSTSS*PFPAAHMKDVL Trigger: AAGAACATCTTTCATGTGGGCAGCAGGAAAAGGCAATGACGACGTGCTCAGGACGATGCTGAGTCTAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS CAA 72 bp | CAGTGCAAAGCTGTTCGTCCCTCTTTGTCTTGGATGTaGGGGTCTGCATTATTCTCCATGAGCACAGCCATA | + |
Preference number: 6 (lower is better) Translates to: QCKAVRPSLSWM*GSALFSMSTAI Trigger: TATGGCTGTGCTCATGGAGAATAATGCAGACCCCAACATCCAAGACAAAGAGGGACGAACAGCTTTGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS TCA 72 bp | TTGTCTCTGAGAGCAGAGTTTCCAACAATGAGTCTCTaGAGGGCACCTTTATCTCCATTAACTGCAGCGGCA | + |
Preference number: 6 (lower is better) Translates to: LSLRAEFPTMSL*RAPLSPLTAAA Trigger: TGCCGCTGCAGTTAATGGAGATAAAGGTGCCCTTCAGAGACTCATTGTTGGAAACTCTGCTCTCAGAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | TGCTTTGAGAAGAGCATCTGCACAGTCCACTCTGTCTaGCAACACACAGTACATAAGTGGTGTTCTCCCAAA | + |
Preference number: 6 (lower is better) Translates to: CFEKSICTVHSV*QHTVHKWCSPK Trigger: TTTGGGAGAACACCACTTATGTACTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | TTTGTTGACATCTGCTCCTGCTTTGAGAAGAGCATCTaGACAGTCCACTCTGTCTGCCAACACACAGTACAT | + |
Preference number: 6 (lower is better) Translates to: FVDICSCFEKSI*TVHSVCQHTVH Trigger: ATGTACTGTGTGTTGGCAGACAGAGTGGACTGTGCAGATGCTCTTCTCAAAGCAGGAGCAGATGTCAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | AAGCGAATGTCCGTCCTGGTCAACCAGATCTACTCGTaGTCCACCTTTAATAAGCGTCTGAATCACATCTCT | + |
Preference number: 6 (lower is better) Translates to: KRMSVLVNQIYS*STFNKRLNHIS Trigger: AGAGATGTGATTCAGACGCTTATTAAAGGTGGAGCACGAGTAGATCTGGTTGACCAGGACGGACATTCGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS TCA 72 bp | GCGGTGTTCTTCCTGCATAATCCTGCACGTTTGGGTTaGTCTTATTTTCTATCAGTATCTGGCAGACGTCAG | + |
Preference number: 6 (lower is better) Translates to: AVFFLHNPARLG*SYFLSVSGRRQ Trigger: CTGACGTCTGCCAGATACTGATAGAAAATAAGATCAACCCAAACGTGCAGGATTATGCAGGAAGAACACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS TCA 72 bp | ACTGTTGTCAAGATGTATAGACTGCAAACTGTTCACTaGGCTGAGATGAAGCACAGCGGGGGCTTTAGAAGA | + |
Preference number: 6 (lower is better) Translates to: TVVKMYRLQTVH*AEMKHSGGFRR Trigger: TCTTCTAAAGCCCCCGCTGTGCTTCATCTCAGCTCAGTGAACAGTTTGCAGTCTATACATCTTGACAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030029.10 |
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CDS GCA 72 bp | GTGGGGTTCGAAATAAGTTATCGTAAGACGTTATGTTaGAGCTTTCATAGGAGGTCAAGACATCCACCACCG | + |
Preference number: 6 (lower is better) Translates to: VGFEISYRKTLC*SFHRRSRHPPP Trigger: CGGTGGTGGATGTCTTGACCTCCTATGAAAGCTGCAACATAACGTCTTACGATAACTTATTTCGAACCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS TCA 72 bp | AGTGGAGTATGTTTCATGACGTCAGTGGCATCCACTTaGGCATCATTGTCCAATAATAACTTCACGGTGCTG | + |
Preference number: 6 (lower is better) Translates to: SGVCFMTSVAST*ASLSNNNFTVL Trigger: CAGCACCGTGAAGTTATTATTGGACAATGATGCTCAAGTGGATGCCACTGACGTCATGAAACATACTCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |
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CDS GCA 72 bp | CCTTCCAGGTCAGAATCATCCTTCACTGAAGGATGCTaGAAAAACACTTTGACCGTTTCAGCAAAGTTACTC | + |
Preference number: 6 (lower is better) Translates to: PSRSESSFTEGC*KNTLTVSAKLL Trigger: GAGTAACTTTGCTGAAACGGTCAAAGTGTTTTTGCAGCATCCTTCAGTGAAGGATGATTCTGACCTGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030029.10 ENSMUST00000143433.2 |