Pregenerated sensors for INTS8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040738Ensembl transcript IDs: ENSMUST00000044616.10, ENSMUST00000108318.3, ENSMUST00000108319.9
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CAGGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTaGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: QALKWELCPVTVISW*NLFLQVDAVKDVPK Trigger: CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| 3UTR CCA 72 bp | TTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTaGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LKWELCPVTVIS*LNLFLQVDAVK Trigger: TTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | TTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGAAAGTCTGCGGCGGGGTaGAGGGCCGGCTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LMLLKMFLRFFYLNILRRKSAAG*RAGWRW Trigger: CCACCTCCAGCCGGCCCTGCACCCCGCCGCAGACTT...TCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGTCGAACCAGCAAGTCTaGGGCGGGGTGCAGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKSNQQV*GGVQGR Trigger: CCGGCCCTGCACCCCGCCGCAGACTTGCTGGTTCGA...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGGTTGGGGGCAGGGCTaGCAGATCCATGTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQGWGQG*QIHVHV Trigger: CACGTGGACATGGATCTGTCAGCCCTGCCCCCAACC...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGGAGGTCTCTCTCCTaGCTGCCCCACTCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSRRSLS*LPHSSL Trigger: GAGGCTGGAGTGGGGCAGTCAGGAGAGAGACCTCCT...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGCCCATTCACCGTGCCTaGCTCCACGGCCAGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQPIHRA*LHGQQV Trigger: GACTTGCTGGCCGTGGAGCCAGGCACGGTGAATGGG...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | TTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTGGATGGCCATGGCAGTaGTTGGGGGCAGGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: FKMGTLSSNSHLLVESFSGWPWQ*LGAGLT Trigger: TGTCAGCCCTGCCCCCAACCACTGCCATGGCCATCC...AGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | TTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGAGCAGGATGGCCATaGCAGTGGTTGGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FKLMLLKMFLRFFYLNILRAGWP*QWLGAG Trigger: CCCTGCCCCCAACCACTGCCATGGCCATCCTGCTCT...GAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTCTGGCGGAGTTTTGGTaGGAACTCTGTCACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFLAEFW*ELCHQL Trigger: GAGCTGGTGACAGAGTTCTCACCAAAACTCCGCCAG...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGCCAACTGGCCAATGTTaGCACTTGCTGAGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQPTGQC*HLLRLG Trigger: TCCCAGCCTCAGCAAGTGTCAACATTGGCCAGTTGG...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCGACACACTGCAGATCTaGACAACAACTTCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LKMFLRFFYLNILRRRSSDTLQI*TTTSQR Trigger: CCTCTGGGAAGTTGTTGTTCAGATCTGCAGTGTGTC...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGCAGGCTTTGCGCAGATaGTTCTCCAACAGCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKQALRR*FSNSDS Trigger: GGAGTCGCTGTTGGAGAAGCATCTGCGCAAAGCCTG...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTGGCCTGGAAGTTCTTTaGAGGTGGCTGCTAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFGLEVL*RWLLKA Trigger: AGCTTTTAGCAGCCACCTGCAAAGAACTTCCAGGCC...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAATCTGTGGAGCCTTGCTaGAAGTATGCTGCACCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQSVEPC*KYAAPK Trigger: CTTGGGTGCAGCATACTTCCAGCAAGGCTCCACAGA...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTGTTTTCATAGATGGCTaGATCTGTGGAGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFVFIDG*ICGALL Trigger: CAGCAAGGCTCCACAGATTCAGCCATCTATGAAAAC...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | GTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGATCCGGACAGGCTTTaGGCAGATGCTTCTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VTVISWLNLFLQVDAVKDDPDRL*ADASPT Trigger: TGTTGGAGAAGCATCTGCGCAAAGCCTGTCCGGATC...ATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGATGACTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTGCCTTGCTGGAAGTATaGTGCACCCAAGTCATAACA | + |
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Preference number: 4 (lower is better) Translates to: MLLKMFLRFFYLNILRRRALLEV*CTQVIT Trigger: TGTTATGACTTGGGTGCAGCATACTTCCAGCAAGGC...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGAATCTGTGGAGCCTTaGTGGAAGTATGCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKESVEP*WKYAAP Trigger: GGGTGCAGCATACTTCCAGCAAGGCTCCACAGATTC...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAAGAGCACACAGCTCCTaGCTGGAGGTAATAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQRAHSS*LEVIVK Trigger: CTTCACTATTACCTCCAGGCAGGAGCTGTGTGCTCT...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | AAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGTCTCTTGTTATCAGGTaGAGGCTGGACTTGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: KDVPKVLLPQYSQETFIQSLVIR*RLDLVL Trigger: CAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGA...CTGGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAACTCTCTTTAGGGCCTaGAAGTTCTTTGCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSTLFRA*KFFAGG Trigger: GCCACCTGCAAAGAACTTCCAGGCCCTAAAGAGAGT...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | AAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGAAGAGCTGTTTGGAGTaGGGAAAGTCCTTAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: KDVPKVLLPQYSQETFIQKSCLE*GKSLTV Trigger: TACTGTTAAGGACTTTCCTCACTCCAAACAGCTCTT...CTGGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAGCTACAACTTaGCGAAGGGGAATATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFSSATT*RRGISG Trigger: TCCTGATATTCCCCTTCGTCAAGTTGTAGCTGAAGA...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCCTCCCGAACATTGTaGAGCTTCACAAAGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: MLLKMFLRFFYLNILRRRSSRTL*SFTKSD Trigger: ATCACTCTTTGTGAAGCTTCACAATGTTCGGGAGGA...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCTTGCTGGAAGTATGCTaGACCCAAGTCATAACACAC | + |
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Preference number: 4 (lower is better) Translates to: LKMFLRFFYLNILRRRSSLLEVC*TQVITH Trigger: GTGTGTTATGACTTGGGTGCAGCATACTTCCAGCAA...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAAGATGGCTGAATCTGTaGAGCCTTGCTGGAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQRWLNL*SLAGSM Trigger: CATACTTCCAGCAAGGCTCCACAGATTCAGCCATCT...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCATCATGAAGACATACTaGAGATCTTCCAACCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKMFLRFFYLNILRRRSSIMKTY*RSSNPR Trigger: TCTGGGGTTGGAAGATCTGCAGTATGTCTTCATGAT...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCATCATTTCCTCGTTTGTaGTGGTTAGACACACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSSFPRL*WLDTLQ Trigger: CTGCAGTGTGTCTAACCAGCACAAACGAGGAAATGA...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTGTAATAGTGAAGAGCTaGCGAATGCTGATTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFVIVKS*RMLICC Trigger: GCAACAAATCAGCATTCGGCAGCTCTTCACTATTAC...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTTCTTCAGGGTTGCTTaGATTCAATTCTGTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MLLKMFLRFFYLNILRRRFFRVA*IQFCLA Trigger: GGCCAAACAGAATTGAATGCAAGCAACCCTGAAGAA...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTACCGATTGTCGGAACTaGACTGGTAAAGTGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GFKMGTLSSNSHLLVESFTDCRN*TGKVKV Trigger: AACTTTCACTTTACCAGTCCAGTTCCGACAATCGGT...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGTTTCCTCGTTTGTGCTaGTTAGACACACTGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQFPRLC*LDTLQI Trigger: GATCTGCAGTGTGTCTAACCAGCACAAACGAGGAAA...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | AAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGGTAATGAAAAGCTCATaGGACGAAATCATGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: KDVPKVLLPQYSQETFIQVMKSS*DEIMKT Trigger: TGTCTTCATGATTTCGTCTCATGAGCTTTTCATTAC...CTGGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCGATCTCTTTCTCATTTaGTCAACAAGCAGCTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LKMFLRFFYLNILRRRSSDLFLI*STSSFR Trigger: ACGAAAGCTGCTTGTTGATCAAATGAGAAAGAGATC...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | TTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGAAAATGTGCTCGGCTGTaGTATCATTCACAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LMLLKMFLRFFYLNILRRKCARL*YHSQCP Trigger: AGGACATTGTGAATGATATCACAGCCGAGCACATTT...TCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCGTTTTGTTCCTGCAATaGCTTGAAGGCTGTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LKMFLRFFYLNILRRRSSVLFLQ*LEGCFV Trigger: TACAAAACAGCCTTCAAGTCATTGCAGGAACAAAAC...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGGCTGGACTTGGTTTTaGTCATTAACTGAAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQGWTWF*SLTEGL Trigger: CAAACCTTCAGTTAATGAGCAAAACCAAGTCCAGCC...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | AAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGAATGTGGATTCCCTCTaGTTTATCAAACTAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDVPKVLLPQYSQETFIQNVDSL*FIKLTL Trigger: CAGAGTTAGTTTGATAAAGCAGAGGGAATCCACATT...CTGGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR GCA 90 bp | AAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGGCCAATGGCTTTGATTaGAATCTGTCTTTTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: KDVPKVLLPQYSQETFIQANGFD*NLSFIC Trigger: ACAGATAAAAGACAGATTGCAATCAAAGCCATTGGC...CTGGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | TTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTGGTGGAGGCTGGACTTaGTTTTGCTCATTAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: FKMGTLSSNSHLLVESFSGGGWT*FCSLTE Trigger: TTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACC...AGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCATTATCAGGTGGAGGCTaGACTTGGTTTTGCTCATTA | + |
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Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSLSGGG*TWFCSL Trigger: TAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAA...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGTCATTCAGCATAACCTaGCGGAGTTTTGGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKSFSIT*RSFGEN Trigger: GTTCTCACCAAAACTCCGCCAGGTTATGCTGAATGA...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CCA 90 bp | CTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTGAAGTTCTTTGCAGGTaGCTGCTAAAAGCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LQVDAVKDVPKVLLPQYSEVLCR*LLKAVQ Trigger: TTGGACAGCTTTTAGCAGCCACCTGCAAAGAACTTC...AGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAAGAGTTCTCATCGTGTaGACATACAGATCCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQRVLIV*TYRSLF Trigger: AAACAAGGATCTGTATGTTCACACGATGAGAACTCT...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR TCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAACATGAGACGAAATCATaGAGACATACTGCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQHETKS*RHTADL Trigger: AAGATCTGCAGTATGTCTTCATGATTTCGTCTCATG...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAACTGATAATATAAGCTaGTGTTCCAACTGGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQTDNIS*CSNWPM Trigger: CATTGGCCAGTTGGAACATCAGCTTATATTATCAGT...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCCCAAAATTGTCGCTCTaGAGTCATACCATGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FKLMLLKMFLRFFYLNILPKLSL*SHTMQF Trigger: GAATTGCATGGTATGACTTCAGAGCGACAATTTTGG...GAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCATACTTCCCACTTATTTaGCACAGTCCAAAATTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSYFPLI*HSPKLS Trigger: CGACAATTTTGGACTGTGTCAAATAAGTGGGAAGTA...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGATTGCCACCTGTGTATaGCAATTCAGCAAAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKIATCV*QFSKEQ Trigger: CTGTTCTTTGCTGAATTGTCATACACAGGTGGCAAT...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAATTTCTCTGAGGAACTaGCATAAAATTGCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSISLRN*HKIATC Trigger: ACAGGTGGCAATTTTATGTCAGTTCCTCAGAGAAAT...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCCTGCAATGACTTaGAGGCTGTTTTGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKVPAMT*RLFCSQ Trigger: TTGACTACAAAACAGCCTTCAAGTCATTGCAGGAAC...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCTGGCTGTTTTGTTCCTaGAATGACTTGAAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKLMLLKMFLRFFYLNILWLFCS*NDLKAV Trigger: AACAGCCTTCAAGTCATTGCAGGAACAAAACAGCCA...GAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGTTGCGTTTTCATAGATaGCTGAATCTGTGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKLRFHR*LNLWSL Trigger: AAGGCTCCACAGATTCAGCCATCTATGAAAACGCAA...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGACAGGAAAACTACTTTaGACAATTGTCCTAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQTGKLL*TIVLIA Trigger: GGCAATTAGGACAATTGTTCAAAGTAGTTTTCCTGT...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCCTAGCTCTTTCACAGTaGTTGCTACAGCTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKLMLLKMFLRFFYLNILLALSQ*LLQLQN Trigger: ATTTTGAAGCTGTAGCAATCACTGTGAAAGAGCTAG...GAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR GCA 90 bp | ATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCCTCTTTCACAGTGATTaGTACAGCTTCAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFFFKLMLLKMFLRFFYLLFHSD*YSFKIH Trigger: GTGGATTTTGAAGCTGTAGCAATCACTGTGAAAGAG...GAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTGCATTCAATTCTGTTTaGCCAATGGCTTTGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVDAVKDVPKVLLPQYSAFNSV*PMALIA Trigger: TGCAATCAAAGCCATTGGCCAAACAGAATTGAATGC...AGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCTTTGGCCAATGGCTTTaGTTGCAATCTGTCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKLMLLKMFLRFFYLNILFGQWL*LQSVFY Trigger: ATAAAAGACAGATTGCAATCAAAGCCATTGGCCAAA...GAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR GCA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAACGAATGCTGATTTGTTaGAAAATAAATATCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWELCPVTVISWLNLFLQRMLIC*KINIRL Trigger: CAAGCGGATATTTATTTTGCAACAAATCAGCATTCG...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CCA 90 bp | TTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTACCGCTTCTCATCTATaGTACAATGAAGAGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FKMGTLSSNSHLLVESFSTASHL*YNEEIM Trigger: CATTATCTCTTCATTGTACCATAGATGAGAAGCGGT...AGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTATGGACTTGACTGTATaGAGTCAATTGTTGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQVDAVKDVPKVLLPQYSMDLTV*SQLLRV Trigger: AACTCTCAACAATTGACTCCATACAGTCAAGTCCAT...AGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCACCAAGCATGGTTGTTTaGATTTATACTGAGTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KMGTLSSNSHLLVESFSSPSMVV*IYTECI Trigger: TATACACTCAGTATAAATCCAAACAACCATGCTTGG...TGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS GCA 90 bp | GCGACTCCTCCAGCAGGAACTCGAACCAGCAAGTCTGCGGCGGGGTaGAGGGCCGGCTGGAGGTGGCCGCCTCCCGGTCCGCCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ATPPAGTRTSKSAAG*RAGWRWPPPGPPPP Trigger: CGGAGGCGGCGGACCGGGAGGCGGCCACCTCCAGCCGGCCCTGCACCCCGCCGCAGACTTGCTGGTTCGAGTTCCTGCTGGAGGAGTCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS GCA 90 bp | GCCATGGCAGTGGTTGGGGGCAGGGCTGACAGATCCATGTCCACGTaGTTGGTCCCGGGAGGGACCTTACTGATGCACAGGAGCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: AMAVVGGRADRSMST*LVPGGTLLMHRSSF Trigger: GAATGAGCTCCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGGATCTGTCAGCCCTGCCCCCAACCACTGCCATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS TCA 90 bp | CTGACAGATCCATGTCCACGTGCTTGGTCCCGGGAGGGACCTTACTaGTGCACAGGAGCTCATTCAGCAGCATGTTCAGCACCGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LTDPCPRAWSREGPY*CTGAHSAACSAPEQ Trigger: CTGTTCCGGTGCTGAACATGCTGCTGAATGAGCTCCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGGATCTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS TCA 90 bp | ACCGTGCCTGGCTCCACGGCCAGCAAGTCTAGAGTTCTCATCGTGTaGACATACAGATCCTTGTTTAATCTCAGAGCTGCTTCCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TVPGSTASKSRVLIV*TYRSLFNLRAASRT Trigger: GGTCCTGGAAGCAGCTCTGAGATTAAACAAGGATCTGTATGTTCACACGATGAGAACTCTAGACTTGCTGGCCGTGGAGCCAGGCACGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS TCA 90 bp | AGGTCAGAAGGAGGTCTCTCTCCTGACTGCCCCACTCCAGCCTCGTaGGTGCGAATATCTAAAAGCAGCATCTCATTCAGCATAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSEGGLSPDCPTPAS*VRISKSSISFSITW Trigger: CCAGGTTATGCTGAATGAGATGCTGCTTTTAGATATTCGCACTCACGAGGCTGGAGTGGGGCAGTCAGGAGAGAGACCTCCTTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS TCA 90 bp | CTGCCATCATTTCCTCGTTTGTGCTGGTTAGACACACTGCAGATCTaGACAACAACTTCCCAGAGGTCTTTAGCGGTCCGTCTACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSFPRLCWLDTLQI*TTTSQRSLAVRLLS Trigger: AGAGAGTAGACGGACCGCTAAAGACCTCTGGGAAGTTGTTGTTCAGATCTGCAGTGTGTCTAACCAGCACAAACGAGGAAATGATGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS GCA 90 bp | ATCAGGAGGCACAGCCTTATTAAAGAAGTCAGAGCACACAGCTCCTaGCTGGAGGTAATAGTGAAGAGCTGCCGAATGCTGATTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IRRHSLIKEVRAHSS*LEVIVKSCRMLICC Trigger: GCAACAAATCAGCATTCGGCAGCTCTTCACTATTACCTCCAGGCAGGAGCTGTGTGCTCTGACTTCTTTAATAAGGCTGTGCCTCCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS CCA 90 bp | GCAAGAAGCTTTAGGACGCGATTTCTCTTGTTATCAGGTGGAGGCTaGACTTGGTTTTGCTCATTAACTGAAGGTTTGGAAGCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSFRTRFLLLSGGG*TWFCSLTEGLEACS Trigger: GGAGCAGGCTTCCAAACCTTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGTCCTAAAGCTTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS CCA 90 bp | AGCTTTAGGACGCGATTTCTCTTGTTATCAGGTGGAGGCTGGACTTaGTTTTGCTCATTAACTGAAGGTTTGGAAGCCTGCTCCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFRTRFLLLSGGGWT*FCSLTEGLEACSKN Trigger: GTTTTTGGAGCAGGCTTCCAAACCTTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGTCCTAAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCCAACTGGCCAATGTaGACACTTGCTGAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MLLKMFLRFFYLNILRRRSNWPM*TLAEAG Trigger: CCCAGCCTCAGCAAGTGTCAACATTGGCCAGTTGGA...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGGGCCTGGAAGTTCTTaGCAGGTGGCTGCTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KWELCPVTVISWLNLFLQGPGSS*QVAAKS Trigger: GCTTTTAGCAGCCACCTGCAAAGAACTTCCAGGCCC...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS TCA 90 bp | ATTAAAATCTGTCTAATCCGCCAGGGATCCACTGATAATATAAGCTaGTGTTCCAACTGGCCAATGTTGACACTTGCTGAGGCTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: IKICLIRQGSTDNIS*CSNWPMLTLAEAGI Trigger: TATCCCAGCCTCAGCAAGTGTCAACATTGGCCAGTTGGAACATCAGCTTATATTATCAGTGGATCCCTGGCGGATTAGACAGATTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS GCA 90 bp | GAAGTCAGAGCACACAGCTCCTGCCTGGAGGTAATAGTGAAGAGCTaGCGAATGCTGATTTGTTGCAAAATAAATATCCGCTTGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: EVRAHSSCLEVIVKS*RMLICCKINIRLNN Trigger: ATTATTCAAGCGGATATTTATTTTGCAACAAATCAGCATTCGGCAGCTCTTCACTATTACCTCCAGGCAGGAGCTGTGTGCTCTGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS GCA 90 bp | GAAAGTAGTTCACTCCGATACATTATGCCTAATGTGGATTCCCTCTaGTTTATCAAACTAACTCTGCCATCATTTCCTCGTTTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESSSLRYIMPNVDSL*FIKLTLPSFPRLCW Trigger: CCAGCACAAACGAGGAAATGATGGCAGAGTTAGTTTGATAAAGCAGAGGGAATCCACATTAGGCATAATGTATCGGAGTGAACTACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS CCA 90 bp | GAACATCACACGCTTGACAATAGCCAGCTAACCGCTTCTCATCTATaGTACAATGAAGAGATAATGAACCTATCTCTGCAAGTAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EHHTLDNSQLTASHL*YNEEIMNLSLQVVL Trigger: AAGAACTACTTGCAGAGATAGGTTCATTATCTCTTCATTGTACCATAGATGAGAAGCGGTTAGCTGGCTATTGTCAAGCGTGTGATGTTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTTAAAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTCTTCTTCAGGGTTGCTaGCATTCAATTCTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFKMGTLSSNSHLLVESFLLQGC*HSILFG Trigger: GCCAAACAGAATTGAATGCAAGCAACCCTGAAGAAG...AAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTTTAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS GCA 90 bp | CACTTATTTGACACAGTCCAAAATTGTCGCTCTGAAGTCATACCATaGAATTCAATTAAAATCTGTCTAATCCGCCAGGGATCCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLFDTVQNCRSEVIP*NSIKICLIRQGSTD Trigger: ATCAGTGGATCCCTGGCGGATTAGACAGATTTTAATTGAATTGCATGGTATGACTTCAGAGCGACAATTTTGGACTGTGTCAAATAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS-3UTR CAA 90 bp | GTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATCTCTTCAGCTACAACTaGACGAAGGGGAATATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTVISWLNLFLQVDAVKDLFSYN*TKGNIR Trigger: CCTGATATTCCCCTTCGTCAAGTTGTAGCTGAAGAG...ATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGATGACTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGTTCCTAAGCCATCATTTCCTCGTTaGTGCTGGTTAGACACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ISWLNLFLQVDAVKDVPKPSFPR*CWLDTL Trigger: CAGTGTGTCTAACCAGCACAAACGAGGAAATGATGG...CTTAGGAACATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS TCA 90 bp | ACAGGTTTAATGCACAGATTTACTCTCGGGGATCTCTTTCTCATTTaGTCAACAAGCAGCTTTCGTTCTTCATCTTTCAACAGTGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TGLMHRFTLGDLFLI*STSSFRSSSFNSVM Trigger: CATTACACTGTTGAAAGATGAAGAACGAAAGCTGCTTGTTGATCAAATGAGAAAGAGATCCCCGAGAGTAAATCTGTGCATTAAACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGATCATTAACTGAAGGTTaGGAAGCCTGCTCCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LMLLKMFLRFFYLNILRRSLTEG*EACSKN Trigger: GTTTTTGGAGCAGGCTTCCAAACCTTCAGTTAATGA...TCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCAGCTTCATTTCCCTGTaGAGCTTTCTGAAAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKMFLRFFYLNILRRRSSSFISL*SFLKKF Trigger: GAACTTTTTCAGAAAGCTCAACAGGGAAATGAAGCT...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTGTACTTCCCACTTATTaGACACAGTCCAAAATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MLLKMFLRFFYLNILRRRVLPTY*TQSKIV Trigger: GACAATTTTGGACTGTGTCAAATAAGTGGGAAGTAC...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTTCATCCGACAGGAAAACTACTTaGAACAATTGTCCTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKMFLRFFYLNILRRRSSDRKTT*NNCPNC Trigger: GCAATTAGGACAATTGTTCAAAGTAGTTTTCCTGTC...GGATGAACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTCCGAATGCTGATTTGTaGCAAAATAAATATCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MLLKMFLRFFYLNILRRRPNADL*QNKYPL Trigger: AAGCGGATATTTATTTTGCAACAAATCAGCATTCGG...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAACTTTGTCCAGTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAACTGCCGAATGCTGATTaGTTGCAAAATAAATATCCG | + |
|
Preference number: 5 (lower is better) Translates to: KWELCPVTVISWLNLFLQLPNAD*LQNKYP Trigger: CGGATATTTATTTTGCAACAAATCAGCATTCGGCAG...TTGAAGAAAAAGATTCAACCAGGAGATGACTGTTACTGGACAAAGTTCCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CAA 90 bp | CAAGTTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGGAACTGACATAAAATaGCCACCTGTGTATGACAAT | + |
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Preference number: 5 (lower is better) Translates to: QVDAVKDVPKVLLPQYSQGTDIK*PPVYDN Trigger: ATTGTCATACACAGGTGGCAATTTTATGTCAGTTCC...CTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CAA 90 bp | ATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACGTAATACTTCTTCAGGGTaGCTTGCATTCAATTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: MLLKMFLRFFYLNILRRRNTSSG*LAFNSV Trigger: AACAGAATTGAATGCAAGCAACCCTGAAGAAGTATT...ACGTCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CAA 90 bp | TTGATGCTGTTAAAGATGTTCCTAAGGTTCTTCTACCTCAATATTCTCAGGAGACTACGTTTATTGATCTaGAACATACCTCAAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LMLLKMFLRFFYLNILRRLRLLI*NIPQGE Trigger: TTCTCCTTGAGGTATGTTCAAGATCAATAAACGTAG...TCTCCTGAGAATATTGAGGTAGAAGAACCTTAGGAACATCTTTAACAGCATCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS-3UTR CAA 90 bp | GTAACAGTCATCTCCTGGTTGAATCTTTTTCTTCAAGTTGATGCTGTTAAAGATGGTTCCCGGAGTTTTTaGATAAAAGAAAGTAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VTVISWLNLFLQVDAVKDGSRSF*IKESSS Trigger: TGAACTACTTTCTTTTATCAAAAAACTCCGGGAACC...ATCTTTAACAGCATCAACTTGAAGAAAAAGATTCAACCAGGAGATGACTGTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044616.10 |
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| CDS GCA 72 bp | CCAGCAGGAACTCGAACCAGCAAGTCTGCGGCGGGGTaGAGGGCCGGCTGGAGGTGGCCGCCTCCCGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: PAGTRTSKSAAG*RAGWRWPPPGP Trigger: CGGACCGGGAGGCGGCCACCTCCAGCCGGCCCTGCACCCCGCCGCAGACTTGCTGGTTCGAGTTCCTGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | GTGGTTGGGGGCAGGGCTGACAGATCCATGTCCACGTaGTTGGTCCCGGGAGGGACCTTACTGATGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: VVGGRADRSMST*LVPGGTLLMHR Trigger: CCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGGATCTGTCAGCCCTGCCCCCAACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 72 bp | GTTGGGGGCAGGGCTGACAGATCCATGTCCACGTGCTaGGTCCCGGGAGGGACCTTACTGATGCACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VGGRADRSMSTC*VPGGTLLMHRS Trigger: GCTCCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGGATCTGTCAGCCCTGCCCCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 90 bp | ATGGCAGTGGTTGGGGGCAGGGCTGACAGATCCATGTCCACGTGCTaGGTCCCGGGAGGGACCTTACTGATGCACAGGAGCTCATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MAVVGGRADRSMSTC*VPGGTLLMHRSSFS Trigger: GCTGAATGAGCTCCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGGATCTGTCAGCCCTGCCCCCAACCACTGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | CCATGTCCACGTGCTTGGTCCCGGGAGGGACCTTACTaGTGCACAGGAGCTCATTCAGCAGCATGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PCPRAWSREGPY*CTGAHSAACSA Trigger: TGCTGAACATGCTGCTGAATGAGCTCCTGTGCATCAGTAAGGTCCCTCCCGGGACCAAGCACGTGGACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | AGCCTGCTCCAAAAACTGAACTATAAGCTGAACTGGTaGAGGATCCGGACAGGCTTTGCGCAGATGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLQKLNYKLNW*RIRTGFAQMLL Trigger: GAGAAGCATCTGCGCAAAGCCTGTCCGGATCCTGCACCAGTTCAGCTTATAGTTCAGTTTTTGGAGCAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 72 bp | GCGGTCCGTCTACTCTCTTTAGGGCCTGGAAGTTCTTaGCAGGTGGCTGCTAAAAGCTGTCCAAGCTTTACA | + |
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Preference number: 6 (lower is better) Translates to: AVRLLSLGPGSS*QVAAKSCPSFT Trigger: TGTAAAGCTTGGACAGCTTTTAGCAGCCACCTGCAAAGAACTTCCAGGCCCTAAAGAGAGTAGACGGACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | CACAGCCTTATTAAAGAAGTCAGAGCACACAGCTCCTaGCTGGAGGTAATAGTGAAGAGCTGCCGAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: HSLIKEVRAHSS*LEVIVKSCRML Trigger: CAGCATTCGGCAGCTCTTCACTATTACCTCCAGGCAGGAGCTGTGTGCTCTGACTTCTTTAATAAGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | GGCTCCACGGCCAGCAAGTCTAGAGTTCTCATCGTGTaGACATACAGATCCTTGTTTAATCTCAGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSTASKSRVLIV*TYRSLFNLRAA Trigger: AGCAGCTCTGAGATTAAACAAGGATCTGTATGTTCACACGATGAGAACTCTAGACTTGCTGGCCGTGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | TTTCCTCGTTTGTGCTGGTTAGACACACTGCAGATCTaGACAACAACTTCCCAGAGGTCTTTAGCGGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: FPRLCWLDTLQI*TTTSQRSLAVR Trigger: ACGGACCGCTAAAGACCTCTGGGAAGTTGTTGTTCAGATCTGCAGTGTGTCTAACCAGCACAAACGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 90 bp | AGGTCTTTAGCGGTCCGTCTACTCTCTTTAGGGCCTGGAAGTTCTTaGCAGGTGGCTGCTAAAAGCTGTCCAAGCTTTACATATGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: RSLAVRLLSLGPGSS*QVAAKSCPSFTYGL Trigger: TAACCCATATGTAAAGCTTGGACAGCTTTTAGCAGCCACCTGCAAAGAACTTCCAGGCCCTAAAGAGAGTAGACGGACCGCTAAAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | CAGCATCTCATTCAGCATAACCTGGCGGAGTTTTGGTaGGAACTCTGTCACCAGCTCCAAACAAGCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: QHLIQHNLAEFW*ELCHQLQTSCK Trigger: TTTACAGCTTGTTTGGAGCTGGTGACAGAGTTCTCACCAAAACTCCGCCAGGTTATGCTGAATGAGATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | TGGAGGTTAGGTATGGAAGATGGCCAGATAGAAATGTaGTCGGCTGTGATATCATTCACAATGTCCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: WRLGMEDGQIEM*SAVISFTMSSR Trigger: TCGGGAGGACATTGTGAATGATATCACAGCCGAGCACATTTCTATCTGGCCATCTTCCATACCTAACCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | GCACACAGCTCCTGCCTGGAGGTAATAGTGAAGAGCTaGCGAATGCTGATTTGTTGCAAAATAAATATCCGC | + |
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Preference number: 6 (lower is better) Translates to: AHSSCLEVIVKS*RMLICCKINIR Trigger: GCGGATATTTATTTTGCAACAAATCAGCATTCGGCAGCTCTTCACTATTACCTCCAGGCAGGAGCTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CCA 72 bp | ACGCGATTTCTCTTGTTATCAGGTGGAGGCTGGACTTaGTTTTGCTCATTAACTGAAGGTTTGGAAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TRFLLLSGGGWT*FCSLTEGLEAC Trigger: GCAGGCTTCCAAACCTTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | TGTCTAATCCGCCAGGGATCCACTGATAATATAAGCTaGTGTTCCAACTGGCCAATGTTGACACTTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CLIRQGSTDNIS*CSNWPMLTLAE Trigger: CTCAGCAAGTGTCAACATTGGCCAGTTGGAACATCAGCTTATATTATCAGTGGATCCCTGGCGGATTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 72 bp | ACTTTAAGAGCAAGAAGCTTTAGGACGCGATTTCTCTaGTTATCAGGTGGAGGCTGGACTTGGTTTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TLRARSFRTRFL*LSGGGWTWFCS Trigger: TGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGTCCTAAAGCTTCTTGCTCTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 90 bp | TGTGCAGCAACTTTAAGAGCAAGAAGCTTTAGGACGCGATTTCTCTaGTTATCAGGTGGAGGCTGGACTTGGTTTTGCTCATTAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: CAATLRARSFRTRFL*LSGGGWTWFCSLTE Trigger: TTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGTCCTAAAGCTTCTTGCTCTTAAAGTTGCTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CCA 72 bp | TTTAGGACGCGATTTCTCTTGTTATCAGGTGGAGGCTaGACTTGGTTTTGCTCATTAACTGAAGGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FRTRFLLLSGGG*TWFCSLTEGLE Trigger: TTCCAAACCTTCAGTTAATGAGCAAAACCAAGTCCAGCCTCCACCTGATAACAAGAGAAATCGCGTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | GACACAGTCCAAAATTGTCGCTCTGAAGTCATACCATaGAATTCAATTAAAATCTGTCTAATCCGCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: DTVQNCRSEVIP*NSIKICLIRQG Trigger: TCCCTGGCGGATTAGACAGATTTTAATTGAATTGCATGGTATGACTTCAGAGCGACAATTTTGGACTGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS GCA 72 bp | TCACTCCGATACATTATGCCTAATGTGGATTCCCTCTaGTTTATCAAACTAACTCTGCCATCATTTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SLRYIMPNVDSL*FIKLTLPSFPR Trigger: ACGAGGAAATGATGGCAGAGTTAGTTTGATAAAGCAGAGGGAATCCACATTAGGCATAATGTATCGGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CCA 72 bp | ACGCTTGACAATAGCCAGCTAACCGCTTCTCATCTATaGTACAATGAAGAGATAATGAACCTATCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TLDNSQLTASHL*YNEEIMNLSLQ Trigger: TTGCAGAGATAGGTTCATTATCTCTTCATTGTACCATAGATGAGAAGCGGTTAGCTGGCTATTGTCAAGCGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS TCA 72 bp | TTTAGCATAAAAGCAACACACTCTTCAGCTACAACTTaGCGAAGGGGAATATCAGGAAGCCTCATTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FSIKATHSSATT*RRGISGSLISK Trigger: TTTGGAAATGAGGCTTCCTGATATTCCCCTTCGTCAAGTTGTAGCTGAAGAGTGTGTTGCTTTTATGCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 90 bp | CACAGGTTTAATGCACAGATTTACTCTCGGGGATCTCTTTCTCATTaGATCAACAAGCAGCTTTCGTTCTTCATCTTTCAACAGTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HRFNAQIYSRGSLSH*INKQLSFFIFQQCN Trigger: ATTACACTGTTGAAAGATGAAGAACGAAAGCTGCTTGTTGATCAAATGAGAAAGAGATCCCCGAGAGTAAATCTGTGCATTAAACCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CAA 72 bp | AATGCACAGATTTACTCTCGGGGATCTCTTTCTCATTaGATCAACAAGCAGCTTTCGTTCTTCATCTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: NAQIYSRGSLSH*INKQLSFFIFQ Trigger: TTGAAAGATGAAGAACGAAAGCTGCTTGTTGATCAAATGAGAAAGAGATCCCCGAGAGTAAATCTGTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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| CDS CCA 72 bp | AATACTTCTTCAGGGTTGCTTGCATTCAATTCTGTTTaGCCAATGGCTTTGATTGCAATCTGTCTTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: NTSSGLLAFNSV*PMALIAICLLS Trigger: AGATAAAAGACAGATTGCAATCAAAGCCATTGGCCAAACAGAATTGAATGCAAGCAACCCTGAAGAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044616.10 ENSMUST00000108318.3 ENSMUST00000108319.9 |
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