Pregenerated sensors for INTS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035161Ensembl transcript IDs: ENSMUST00000053959.7, ENSMUST00000223585.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAATGCTGACAGGGCCTGTTCTTTCTCACAGCGGTGCTGCTGCTaGGGAGGTCTCGGACCTCTGCTTTTAAAGCAGATCGGCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: FNADRACSFSQRCCC*GGLGPLLLKQIGPS Trigger: TGAAGGGCCGATCTGCTTTAAAAGCAGAGGTCCGAGACCTCCTCAGCAGCAGCACCGCTGTGAGAAAGAACAGGCCCTGTCAGCATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | AAAATGGTTCCTAATATGCAGGTCTCTCTGATGGTGTGCTCCAGCTaGCTAGACAGCAGCTTCTTAAAAGGAGGGCTGGGTAGAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: KMVPNMQVSLMVCSS*LDSSFLKGGLGRNR Trigger: CCTGTTTCTACCCAGCCCTCCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGCATATTAGGAACCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR GCA 90 bp | AGAGGTGGAAGTGGCTTCAGGGATGAGAGCCATGTACTGCAGTCCTaGACAGCAAATATTAGCAAATCAGCAGCTCCAACAAAGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RGGSGFRDESHVLQS*TANISKSAAPTKFP Trigger: AGGAAACTTTGTTGGAGCTGCTGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAAGCCACTTCCACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CCA 90 bp | AAGGGATTTTTAAATCCCTTAGACCCTTCAGCTGGGGCTAGAAGATaGCCATGGTTAAGAGCATTTGCTTCCCAGCACCCACATGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: KGFLNPLDPSAGARR*PWLRAFASQHPHGN Trigger: GTTTCCATGTGGGTGCTGGGAAGCAAATGCTCTTAACCATGGCCATCTTCTAGCCCCAGCTGAAGGGTCTAAGGGATTTAAAAATCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | AAACCTGGATATTCTCAGTTCAGATGGGGTGTGTGTCATACCAGATaGCTTTGCAATCCCTCTGAAACAGAAGGGCCGAGCAGTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: KPGYSQFRWGVCHTR*LCNPSETEGPSSFK Trigger: TTTGAAACTGCTCGGCCCTTCTGTTTCAGAGGGATTGCAAAGTCATCTGGTATGACACACACCCCATCTGAACTGAGAATATCCAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | AGCTCTTTCCAAAGAAAATCATTGTCAGGGACAAAAGGAGGCAACTaGTGTCCACTCTGTCCTGATGAGGAAGAAGCTGAGGTCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: SSFQRKSLSGTKGGN*CPLCPDEEEAEVQM Trigger: CATTTGGACCTCAGCTTCTTCCTCATCAGGACAGAGTGGACATCAGTTGCCTCCTTTTGTCCCTGACAATGATTTTCTTTGGAAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR GCA 90 bp | CAAGTAATACCCCAACTATGTAACTCACACATCCAAAGTGAGTCTTaGTCCTCCTTGGAGAGCCTCCTGGTTATCATAAAGTGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: QVIPQLCNSHIQSES*SSLESLLVIIKCSS Trigger: ACTGCTGCACTTTATGATAACCAGGAGGCTCTCCAAGGAGGAGCAAGACTCACTTTGGATGTGTGAGTTACATAGTTGGGGTATTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR TCA 90 bp | TTGGAGATTATTTGGGAAGAAGGAGTTCATAACATAACTTCACCATaGTTATCCCGACCCCACAGTGACTGTGACTACACAAAACGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LEIIWEEGVHNITSP*LSRPHSDCDYTKRH Trigger: GTGCCGTTTTGTGTAGTCACAGTCACTGTGGGGTCGGGATAATCATGGTGAAGTTATGTTATGAACTCCTTCTTCCCAAATAATCTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR GCA 90 bp | ACTGATGTCCACTCTGTCCTGATGAGGAAGAAGCTGAGGTCCAAATaGAGACAATTTATAAATGTGTGGCCAACAGTACATAAAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: TDVHSVLMRKKLRSK*RQFINVWPTVHKSY Trigger: GTAGCTTTTATGTACTGTTGGCCACACATTTATAAATTGTCTGCATTTGGACCTCAGCTTCTTCCTCATCAGGACAGAGTGGACATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | ACAGCAGGCACTTTAACACCAGATTATCCTCCTAATACTAACCTCTaGCTTACCAGTGTCTTCCTAAAAACTGCAGCCCAACAAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: TAGTLTPDYPPNTNL*LTSVFLKTAAQQEL Trigger: TAATTCTTGTTGGGCTGCAGTTTTTAGGAAGACACTGGTAAGTCAGAGGTTAGTATTAGGAGGATAATCTGGTGTTAAAGTGCCTGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | CTGAAACAGAAGGGCCGAGCAGTTTCAAATCTTAGTTCTACATGCTaGAGTTCACTCTTTACTGCAACACATGTCATTTCATCTGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: LKQKGRAVSNLSSTC*SSLFTATHVISSVE Trigger: CTCTACAGATGAAATGACATGTGTTGCAGTAAAGAGTGAACTTCAGCATGTAGAACTAAGATTTGAAACTGCTCGGCCCTTCTGTTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR GCA 90 bp | GGCAATTTTCTGTACAATCACTCCCTATATACTTGTGGCACTGAATaGTCAAGTTTTACTCAAGAGTCTTCAAACATACACTATGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GNFLYNHSLYTCGTE*SSFTQESSNIHYVH Trigger: GTGCACATAGTGTATGTTTGAAGACTCTTGAGTAAAACTTGAGCATTCAGTGCCACAAGTATATAGGGAGTGATTGTACAGAAAATTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR TCA 90 bp | ACTTGGCAATTTTCTGTACAATCACTCCCTATATACTTGTGGCACTaGATGCTCAAGTTTTACTCAAGAGTCTTCAAACATACACTATGT | + |
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Preference number: 1 (lower is better) Translates to: TWQFSVQSLPIYLWH*MLKFYSRVFKHTLC Trigger: ACATAGTGTATGTTTGAAGACTCTTGAGTAAAACTTGAGCATTCAGTGCCACAAGTATATAGGGAGTGATTGTACAGAAAATTGCCAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 90 bp | AGCTTTTTCTCCCCATTCTCTTCGGTTCTCTCCTCCGTGAGTGTTTaGGGTGTGGTCGTCCAAGCCAAGTGCCTGTCACCAGCCTCGGAA | + |
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Preference number: 2 (lower is better) Translates to: SFFSPFSSVLSSVSV*GVVVQAKCLSPASE Trigger: TTCCGAGGCTGGTGACAGGCACTTGGCTTGGACGACCACACCCAAAACACTCACGGAGGAGAGAACCGAAGAGAATGGGGAGAAAAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGGGGTACCAGGTCCTCTaGAGCCACAGGTACATTCAG | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRGYQVL*SHRYIQ Trigger: CTGAATGTACCTGTGGCTGCAGAGGACCTGGTACCC...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGACTTTGCAATCCCTCTaGAACAGAAGGGCCGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRTLQSL*NRRAEQ Trigger: CTGCTCGGCCCTTCTGTTTCAGAGGGATTGCAAAGT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTATATGCAGGTCTCTCTaGTGGTGTGCTCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLICRSL*WCAPAD Trigger: GTCAGCTGGAGCACACCATCAGAGAGACCTGCATAT...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACATGTTACTTGGCACGAGCCCAGAGGGTGAGCTTGAGTTTGAACACCACCAGTCTTGCTCCTCCTTaGAGAGCCTCCTGGTTATCA | + |
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Preference number: 2 (lower is better) Translates to: VTCYLARAQRVSLSLNTTSLAPP*RASWLS Trigger: TGATAACCAGGAGGCTCTCCAAGGAGGAGCAAGACT...GGTGGTGTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACATGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAATTAGAGACCCACTCTCATaGGAACCAACAGCAGAACTA | + |
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Preference number: 2 (lower is better) Translates to: VASQWQKQPQSKKGCDRIRDPLS*EPTAEL Trigger: TAGTTCTGCTGTTGGTTCTCATGAGAGTGGGTCTCT...AATTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GTTACATGTTACTTGGCACGAGCCCAGAGGGTGAGCTTGAGTTTGAACACCACCGAGCAAGAAGGGATGTaGCAGAATTTAGGGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VTCYLARAQRVSLSLNTTEQEGM*QNLGSA Trigger: TGCAGACCCTAAATTCTGTCACATCCCTTCTTGCTC...GGTGGTGTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACATGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GTTACATGTTACTTGGCACGAGCCCAGAGGGTGAGCTTGAGTTTGAACACCACCAGCAGTATTCTGAGGTaGCCTATGAAGCCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VTCYLARAQRVSLSLNTTSSILR*PMKPSS Trigger: GGAAGATGGCTTCATAGGTCACCTCAGAATACTGCT...GGTGGTGTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACATGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTGAAATCAGGGCTTTCTaGTCACAGGCCAGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGGYYIPLHSQLLSKNLPEIRAF*SQASGR Trigger: CCTTCCACTGGCCTGTGAGCAGAAAGCCCTGATTTC...AGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGGGATGGAGAATGGAGTaGCAGATATCCTCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRGWRME*QISSSC Trigger: ACAGGATGAGGATATCTGGCACTCCATTCTCCATCC...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGGAACAGAAGGGCCACTaGCTAAAGCTCATATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKREQKGH*LKLISS Trigger: ACTGGATATGAGCTTTAGGCAGTGGCCCTTCTGTTC...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTTCAGGACACAGATGGTaGCATCACAGTGGCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SGGYYIPLHSQLLSKNLPSGHRW*HHSGRS Trigger: GCTTCTGCCACTGTGATGCCACCATCTGTGTCCTGA...AGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTCTACTCACACATCCAAAGTaGGTCTTGCTCCTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGYYIPLHSQLLSKNLPLLTHPK*VLLLLG Trigger: TCCAAGGAGGAGCAAGACTCACTTTGGATGTGTGAG...TAGAGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTGCAGCTCCAGTTCCAGGGACAAGCAGAGGATTTaGAGAATAGTTTTAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CFPAPTWKLLGVCSSSSRDKQRI*RIVLVG Trigger: ACCAACTAAAACTATTCTTCAAATCCTCTGCTTGTC...CCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAATTAGGCCAGTGGAAGGATaGCCAATTTTGTATTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VASQWQKQPQSKKGCDRIRPVEG*PILYLE Trigger: CTCCAAATACAAAATTGGGCATCCTTCCACTGGCCT...AATTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGATTGGTCACCTTCTATTAGGCCCAACTTTCCAAAGGCCCCACCCACTCCTGGTTATCATAAAGTaGAGCAGTTTCCCCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VQIGHLLLGPTFQRPHPLLVIIK*SSFPKD Trigger: ATCCTTGGGGAAACTGCTGCACTTTATGATAACCAG...GAGTGGGTGGGGCCTTTGGAAAGTTGGGCCTAATAGAAGGTGACCAATCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGATTCCACCATGCTTATaGCATAAAGACCCTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRIPPCL*HKDPSK Trigger: CTTGGAAGGGTCTTTATGTCATAAGCATGGTGGAAT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTACCACCACCAAGTTTTaGCATAAACTTGTGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLTTTKF*HKLVPP Trigger: TGGAGGCACAAGTTTATGTCAAAACTTGGTGGTGGT...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTCTATTCAGCTCACAGTTCTaGAAGTCTCTCTGCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GGYYIPLHSQLLSKNLPLFSSQF*KSLCSV Trigger: TACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAA...TAGAGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | GAATTTAGGGTCTGCATAGAGACCCACTCTCATGAGAACCAACAGCAGAACTATATCCAAAGTGAGTCTTaGTCCTCCTTGGAGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: EFRVCIETHSHENQQQNYIQSES*SSLESL Trigger: GAGGCTCTCCAAGGAGGAGCAAGACTCACTTTGGAT...ATAGTTCTGCTGTTGGTTCTCATGAGAGTGGGTCTCTATGCAGACCCTAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGACTTGTGGCACTGAATaGTCAAGTTTTACTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRTCGTE*SSFTQE Trigger: CTCTTGAGTAAAACTTGAGCATTCAGTGCCACAAGT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAACACTCAAGTAATACCCTGCTCACAGGCCAGTaGAAGGATGCCCAATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: GAKLPTQEEALWKHSSNTLLTGQ*KDAQFC Trigger: ACAAAATTGGGCATCCTTCCACTGGCCTGTGAGCAG...GGTATTACTTGAGTGTTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGATTTGGAGAAGACAATaGAATAAGTGGCCTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRIWRRQ*NKWPHS Trigger: AGAATGAGGCCACTTATTTCATTGTCTTCTCCAAAT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGAGCCTTCTCCAAATATaGTATACCCTAAAGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRSLLQI*YTLKLS Trigger: TGATAGCTTTAGGGTATATCATATTTGGAGAAGGCT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCATCTCCAGTTAGATTCTaGGAATCAGGGAGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: FRDESHVLQSCTANISKSSPVRF*ESGSRT Trigger: GGTTCTGCTCCCTGATTCTCAGAATCTAACTGGAGA...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCAGATGTGCAGCCCTGTaGGGATGGAGAATGGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPRCAAL*GWRMEC Trigger: GCACTCCATTCTCCATCCTCACAGGGCTGCACATCT...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTTTAACAAGTATCATTaGCCCATCAACAAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLFNKYH*PINKEW Trigger: CCACTCCTTGTTGATGGGGCAATGATACTTGTTAAA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTCATGTACTGCAGTCCTaGACAGCAAATATTAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLHVLQS*TANISK Trigger: TTTGCTAATATTTGCTGTGCAGGACTGCAGTACATG...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACATGTTACTTGGCACGAGCCCAGAGGGTGAGCTTGAGTTTGAACACCACCCAAGAAGAAGCTTTGTaGAAACACTCAAGTAATACC | + |
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Preference number: 2 (lower is better) Translates to: VTCYLARAQRVSLSLNTTQEEAL*KHSSNT Trigger: GGTATTACTTGAGTGTTTCCACAAAGCTTCTTCTTG...GGTGGTGTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACATGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR CCA 90 bp | CATTTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGAAGGGCTGTCCAGATTaGTCACCTTCTATTAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: HFIQLTVLKVSLLCIRTQKGCPD*SPSIRP Trigger: GGGCCTAATAGAAGGTGACCAATCTGGACAGCCCTT...CTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAGCTGGGGCTAGAAGATaGCCATGGTTAAGAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: FRDESHVLQSCTANISKSAGARR*PWLRAF Trigger: AAATGCTCTTAACCATGGCCATCTTCTAGCCCCAGC...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR CCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTCAGTAAAGAGCTGTTaGCAATTCTCAGTAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLSVKSC*QFSVVF Trigger: GAACACTACTGAGAATTGCCAACAGCTCTTTACTGA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGACACGCAAGAGCCAATaGCAAGCAGAGGATTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERNEYSRLSLFPLQLDSETRKSQ*QAEDLK Trigger: CTTCAAATCCTCTGCTTGTCATTGGCTCTTGCGTGT...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAAGAACAGTGTCTCAATaGAAAGATGGCAGACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: FRDESHVLQSCTANISKSRTVSQ*KDGRHR Trigger: CCTGTGTCTGCCATCTTTTCATTGAGACACTGTTCT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAGCCCATCTGTCTATCTaGCACAGACCTAGTAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: FRDESHVLQSCTANISKSAHLSI*HRPSKY Trigger: ATACTTACTAGGTCTGTGGCAGATAGACAGATGGGC...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR GCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTGTCTTCCTAAAAACTaGAGCCCAACAAGAATTATC | + |
|
Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLCLPKN*SPTRII Trigger: GATAATTCTTGTTGGGCTGCAGTTTTTAGGAAGACA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTGGAGTATATTGGCATaGCCAACAAAAACTAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLWSILA*PTKTKN Trigger: GTTCTTAGTTTTTGTTGGCCATGCCAATATACTCCA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTATTTGGAGAAGACAATaGAATAAGTGGCCTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGGYYIPLHSQLLSKNLPIWRRQ*NKWPHS Trigger: AGAATGAGGCCACTTATTTCATTGTCTTCTCCAAAT...AGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR-3UTR GCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTTTAATTTCCCAATTTaGACTCCTGTAACACTACAC | + |
|
Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLFNFPI*TPVTLH Trigger: GTGTAGTGTTACAGGAGTGCAAATTGGGAAATTAAA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTTTTAGTATCCTGGGTTaGATTTTAGTCTTACATGAC | + |
|
Preference number: 2 (lower is better) Translates to: YLLSHLTTPICRVVLCLLFSILG*ILVLHD Trigger: GTCATGTAAGACTAAAATCCAACCCAGGATACTAAA...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCTCCTTAGTAAAGATGTaGAGCCCTGTGAGGATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPSLVKM*SPVRME Trigger: CTCCATCCTCACAGGGCTGCACATCTTTACTAAGGA...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGTCCTGTAAGAAAGGTTaGAAGGTGTTAAGAAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ERNEYSRLSLFPLQLDSESCKKG*KVLRSQ Trigger: TTGGCTTCTTAACACCTTTCAACCTTTCTTACAGGA...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCACATTTTTGTCATTTGTaGATTAGGCCAAGATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FRDESHVLQSCTANISKSHFCHL*IRPRWL Trigger: AAGCCATCTTGGCCTAATTCACAAATGACAAAAATG...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATAATGGTTAAGAGCATTTaGTTCCCAGCACCCACATGG | + |
|
Preference number: 2 (lower is better) Translates to: FWMMVVHITQGKVDNFLIMVKSI*FPAPTW Trigger: CCATGTGGGTGCTGGGAAGCAAATGCTCTTAACCAT...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCTTATCCAGGCAAGAGTaGAGTATATTGGCATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPLSRQE*SILAWP Trigger: TGGCCATGCCAATATACTCCACTCTTGCCTGGATAA...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CAA 90 bp | CAGTACATAAAAGCTACCTACCAACCAGTGGTGGGAATTAAATCCTaGCTTAAAGAACCTTGTGTGCTTCATCCTTTGGATGTACACATT | + |
|
Preference number: 2 (lower is better) Translates to: QYIKATYQPVVGIKS*LKEPCVLHPLDVHI Trigger: AATGTGTACATCCAAAGGATGAAGCACACAAGGTTCTTTAAGCAAGGATTTAATTCCCACCACTGGTTGGTAGGTAGCTTTTATGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCAAGGGCACTGTAAAATaGTGGAAAGGAACTGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPKGTVK*WKGTVE Trigger: TTCTACAGTTCCTTTCCATCATTTTACAGTGCCCTT...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CAA 90 bp | CAGACACAGAAGATCCTGTTATTTTACACTCCTTGGGGGTTCATTTaGGAAATTGTAGTAAAGGAAGAAGATCTGAGAATTATTCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: QTQKILLFYTPWGFI*EIVVKEEDLRIIPP Trigger: TGGTGGAATAATTCTCAGATCTTCTTCCTTTACTACAATTTCCAAAATGAACCCCCAAGGAGTGTAAAATAACAGGATCTTCTGTGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATAAAGAGTGGAGTATATTaGCATGGCCAACAAAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: FWMMVVHITQGKVDNFLIKSGVY*HGQQKL Trigger: TAGTTTTTGTTGGCCATGCCAATATACTCCACTCTT...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | AGCCACAGGTACATTCAGCGCTTAGCCCCGTGGAGCTaGTCACCAAGATCGACCCTTGTTATGTCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHRYIQRLAPWS*SPRSTLVMSAQ Trigger: CTGGGCAGACATAACAAGGGTCGATCTTGGTGAGCAGCTCCACGGGGCTAAGCGCTGAATGTACCTGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | AGTGGGGTGCACATGCTCTCAGCACACATGTGGAGGTaGGGGGAACTCTTGGGAAGTCAGGTTCTCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGVHMLSAHMWR*GELLGSQVLLP Trigger: TGGAAGGAGAACCTGACTTCCCAAGAGTTCCCCTCACCTCCACATGTGTGCTGAGAGCATGTGCACCCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | TCCGTGAGTGTTTTGGGTGTGGTCGTCCAAGCCAAGTaGCTGTCACCAGCCTCGGAAAACGGAGGAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVSVLGVVVQAK*LSPASENGGNQ Trigger: CTGATTTCCTCCGTTTTCCGAGGCTGGTGACAGGCACTTGGCTTGGACGACCACACCCAAAACACTCACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAAGAGTCTTGCTCCTCCTaGGAGAGCCTCCTGGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: WWHHSGRSSHRARRDVTEESCSS*ESLLVI Trigger: GATAACCAGGAGGCTCTCCAAGGAGGAGCAAGACTC...TTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR GCA 72 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTaGAGCTCCAGTTCCAGGGAATCTCACACTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CFPAPTWKLLGV*SSSSRESHTLF Trigger: GAAGAGAGTGTGAGATTCCCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CCA 72 bp | GCTCCAGTTCCAGGGAATCTCACACTCTCTTCTCTTTaGGCTTCTACAAGCACTAGGCCCGCATGTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: APVPGNLTLSSL*ASTSTRPACSA Trigger: TGCACTACATGCGGGCCTAGTGCTTGTAGAAGCCCAAAGAGAAGAGAGTGTGAGATTCCCTGGAACTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | CCTAATATGCAGGTCTCTCTGATGGTGTGCTCCAGCTaGCTAGACAGCAGCTTCTTAAAAGGAGGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PNMQVSLMVCSS*LDSSFLKGGLG Trigger: ACCCAGCCCTCCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGCATATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | TATTTATTGTGTGTGCATGCTGGAGTGGGGTGCACATaGTCTCAGCACACATGTGGAGGTGAGGGGAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLLCVHAGVGCT*SQHTCGGEGNS Trigger: AGAGTTCCCCTCACCTCCACATGTGTGCTGAGAGCATGTGCACCCCACTCCAGCATGCACACACAATAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CCA 72 bp | TCCCTCTCACTGAGAAGAGCAGGTAGGCACCTGTTCTaGGTAATCCCTTTCCTGAAAGACCACCACCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLRRAGRHLF*VIPFLKDHHQV Trigger: AACTTGGTGGTGGTCTTTCAGGAAAGGGATTACCCAGAACAGGTGCCTACCTGCTCTTCTCAGTGAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTGCAGCTCCAGTTCCAGGTTTTCTTTACAGGGTTaGTCTTCAGTATCGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFPAPTWKLLGVCSSSSRFSLQG*SSVSEE Trigger: CTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAA...CCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | GAGTCAGGACACATGGTCACATCCTTAGTAAAGATGTaGAGCCCTGTGAGGATGGAGAATGGAGTGCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ESGHMVTSLVKM*SPVRMENGVPD Trigger: ATCTGGCACTCCATTCTCCATCCTCACAGGGCTGCACATCTTTACTAAGGATGTGACCATGTGTCCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | GAGGTGGAAGTGGCTTCAGGGATGAGAGCCATGTACTaGAGTCCTGCACAGCAAATATTAGCAAATCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EVEVASGMRAMY*SPAQQILANQQ Trigger: CTGCTGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAAGCCACTTCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | AAAACATATTTATTGTGTGTGCATGCTGGAGTGGGGTaGACATGCTCTCAGCACACATGTGGAGGTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KTYLLCVHAGVG*TCSQHTCGGEG Trigger: CCCCTCACCTCCACATGTGTGCTGAGAGCATGTGCACCCCACTCCAGCATGCACACACAATAAATATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGAGAAACTTCACTAGCTaGACTAACTTGCCCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRRNFTS*TNLPTI Trigger: GATGGTGGGCAAGTTAGTCAAGCTAGTGAAGTTTCT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | CAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTaGGAATCAGGGAGCAGAACCAAGAGATCCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QPSKSVSSPVRF*ESGSRTKRSTL Trigger: CAGAGTGGATCTCTTGGTTCTGCTCCCTGATTCTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | TATTCTCAGTTCAGATGGGGTGTGTGTCATACCAGATaGCTTTGCAATCCCTCTGAAACAGAAGGGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YSQFRWGVCHTR*LCNPSETEGPS Trigger: GCTCGGCCCTTCTGTTTCAGAGGGATTGCAAAGTCATCTGGTATGACACACACCCCATCTGAACTGAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | ACTTCTTCCTGGCTCTTGCCCATTCTCTACTGCCAGTaGAAAGTGGGACAACCATCTCCTGATATCCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: TSSWLLPILYCQ*KVGQPSPDIPL Trigger: CAATGGGATATCAGGAGATGGTTGTCCCACTTTTCACTGGCAGTAGAGAATGGGCAAGAGCCAGGAAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | CACAGAGCAAGAAGGGATGTGACAGAATTTAGGGTCTaGATAGAGACCCACTCTCATGAGAACCAACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HRARRDVTEFRV*IETHSHENQQQ Trigger: CTGCTGTTGGTTCTCATGAGAGTGGGTCTCTATGCAGACCCTAAATTCTGTCACATCCCTTCTTGCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR GCA 72 bp | AGTGGCTTCAGGGATGAGAGCCATGTACTGCAGTCCTaGACAGCAAATATTAGCAAATCAGCAGCTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SGFRDESHVLQS*TANISKSAAPT Trigger: TGTTGGAGCTGCTGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAAGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAACTTCTTCCTGGCTCTaGCCCATTCTCTACTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FRDESHVLQSCTANISKSTSSWL*PILYCQ Trigger: CTGGCAGTAGAGAATGGGCAAGAGCCAGGAAGAAGT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | GTTCTGCATTTATGTTATCTGCATGCTTTTCAATGCTaGCAGGGCCTGTTCTTTCTCACAGCGGTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLHLCYLHAFQC*QGLFFLTAVLL Trigger: CAGCAGCACCGCTGTGAGAAAGAACAGGCCCTGTCAGCATTGAAAAGCATGCAGATAACATAAATGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | TGCTCCTCCTTGGAGAGCCTCCTGGTTATCATAAAGTaGAGCAGTTTCCCCAAGGATATTTCCTCACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSSLESLLVIIK*SSFPKDISSLS Trigger: AGAAAGTGAGGAAATATCCTTGGGGAAACTGCTGCACTTTATGATAACCAGGAGGCTCTCCAAGGAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR GCA 72 bp | CCCCAACTATGTAACTCACACATCCAAAGTGAGTCTTaGTCCTCCTTGGAGAGCCTCCTGGTTATCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQLCNSHIQSES*SSLESLLVIIK Trigger: CTTTATGATAACCAGGAGGCTCTCCAAGGAGGAGCAAGACTCACTTTGGATGTGTGAGTTACATAGTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR CCA 72 bp | CTTAGTAAAGATGTGCAGCCCTGTGAGGATGGAGAATaGAGTGCCAGATATCCTCATCCTGTGCAAATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSKDVQPCEDGE*SARYPHPVQIR Trigger: CCTTATTTGCACAGGATGAGGATATCTGGCACTCCATTCTCCATCCTCACAGGGCTGCACATCTTTACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | GGGTGTGTGTCATACCAGATGACTTTGCAATCCCTCTaGAACAGAAGGGCCGAGCAGTTTCAAATCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GCVSYQMTLQSL*NRRAEQFQILV Trigger: AACTAAGATTTGAAACTGCTCGGCCCTTCTGTTTCAGAGGGATTGCAAAGTCATCTGGTATGACACACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | CAAAGAAAATCATTGTCAGGGACAAAAGGAGGCAACTaGTGTCCACTCTGTCCTGATGAGGAAGAAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRKSLSGTKGGN*CPLCPDEEEAE Trigger: CTCAGCTTCTTCCTCATCAGGACAGAGTGGACATCAGTTGCCTCCTTTTGTCCCTGACAATGATTTTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAACTAGCTTGACTAACTaGCCCACCATCTTTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FRDESHVLQSCTANISKSTSLTN*PTIFER Trigger: CCTTTCAAAGATGGTGGGCAAGTTAGTCAAGCTAGT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTAGATTTCTGTCCTGTTaGTTGTCTTTCTCAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YLLSHLTTPICRVVLCLLRFLSC*LSFSKA Trigger: AGCTTTTGAGAAAGACAACAAACAGGACAGAAATCT...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | AAGGAAGAAGATCTGAGAATTATTCCACCATGCTTATaGCATAAAGACCCTTCCAAGGACAGCCCCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: KEEDLRIIPPCL*HKDPSKDSPHV Trigger: CACATGGGGGCTGTCCTTGGAAGGGTCTTTATGTCATAAGCATGGTGGAATAATTCTCAGATCTTCTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | GTTCTGCCCCTATGTTCTGCATTTATGTTATCTGCATaGTTTTCAATGCTGACAGGGCCTGTTCTTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLPLCSAFMLSA*FSMLTGPVLSH Trigger: GTGAGAAAGAACAGGCCCTGTCAGCATTGAAAAGCATGCAGATAACATAAATGCAGAACATAGGGGCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCACAAGAGTGGAGTATATaGGCATGGCCAACAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: FRDESHVLQSCTANISKSQEWSI*AWPTKT Trigger: AGTTTTTGTTGGCCATGCCAATATACTCCACTCTTG...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAGAGTTTCAAATCCCCTaGACTAAAATAGCAGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FRDESHVLQSCTANISKSEFQIP*TKIADL Trigger: GAGGTCTGCTATTTTAGTCAAGGGGATTTGAAACTC...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | TCTCTACTGCCAGTGAAAAGTGGGACAACCATCTCCTaGTATCCCATTGTTTTAGTATCCTGGGTTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLPVKSGTTIS*YPIVLVSWVGF Trigger: AAATCCAACCCAGGATACTAAAACAATGGGATATCAGGAGATGGTTGTCCCACTTTTCACTGGCAGTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | TGGATTCCATGGATTGAATTAAGGTCATCAGATTTATaGGGCAAGCTACATTACCTGCTGAGCCATCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: WIPWIELRSSDL*GKLHYLLSHLT Trigger: GGTGAGATGGCTCAGCAGGTAATGTAGCTTGCCTCATAAATCTGATGACCTTAATTCAATCCATGGAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR GCA 72 bp | CACTCTGTCCTGATGAGGAAGAAGCTGAGGTCCAAATaGAGACAATTTATAAATGTGTGGCCAACAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: HSVLMRKKLRSK*RQFINVWPTVH Trigger: ATGTACTGTTGGCCACACATTTATAAATTGTCTGCATTTGGACCTCAGCTTCTTCCTCATCAGGACAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CCA 72 bp | ACTCTTGGGAAGTCAGGTTCTCCTTCCACTTGTAGGTaGATTCCATGGATTGAATTAAGGTCATCAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TLGKSGSPSTCR*IPWIELRSSDL Trigger: TAAATCTGATGACCTTAATTCAATCCATGGAATCCACCTACAAGTGGAAGGAGAACCTGACTTCCCAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCATTTATAAACTCCTTTTaGACTTTGGCACTCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FRDESHVLQSCTANISKSFINSF*TLALCS Trigger: TGAGCAGAGTGCCAAAGTCAAAAAGGAGTTTATAAA...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGATGACACAAGAAGAAGCTTaGTGGAAACACTCAAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FIQLTVLKVSLLCIRTQMTQEEA*WKHSSN Trigger: ATTACTTGAGTGTTTCCACAAAGCTTCTTCTTGTGT...CATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR TCA 72 bp | ACTTTAACACCAGATTATCCTCCTAATACTAACCTCTaGCTTACCAGTGTCTTCCTAAAAACTGCAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLTPDYPPNTNL*LTSVFLKTAAQ Trigger: TTGGGCTGCAGTTTTTAGGAAGACACTGGTAAGTCAGAGGTTAGTATTAGGAGGATAATCTGGTGTTAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | AAGGGCCGAGCAGTTTCAAATCTTAGTTCTACATGCTaGAGTTCACTCTTTACTGCAACACATGTCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGRAVSNLSSTC*SSLFTATHVIS Trigger: TGAAATGACATGTGTTGCAGTAAAGAGTGAACTTCAGCATGTAGAACTAAGATTTGAAACTGCTCGGCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | AAGGGTCACAGCATTAGGAAGTTTGAGGGACTAATCTaGAAAGCTAATACTGCTTTAGGTTTGGATTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGHSIRKFEGLI*KANTALGLDLD Trigger: GTCTAAATCCAAACCTAAAGCAGTATTAGCTTTTCAGATTAGTCCCTCAAACTTCCTAATGCTGTGACCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR GCA 72 bp | CTGTACAATCACTCCCTATATACTTGTGGCACTGAATaGTCAAGTTTTACTCAAGAGTCTTCAAACATACAC | + |
|
Preference number: 3 (lower is better) Translates to: LYNHSLYTCGTE*SSFTQESSNIH Trigger: GTGTATGTTTGAAGACTCTTGAGTAAAACTTGAGCATTCAGTGCCACAAGTATATAGGGAGTGATTGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR TCA 72 bp | ACAAAAATAATTTTATGGTTGGAGGTCACCATAACGTaGAGAACTGTGTTAAAGGGTCACAGCATTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TKIILWLEVTIT*RTVLKGHSIRK Trigger: CTTCCTAATGCTGTGACCCTTTAACACAGTTCTTCACGTTATGGTGACCTCCAACCATAAAATTATTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR TCA 72 bp | TTATATAATATACACATTTTATTCAGCTCACAGTTCTaGAAGTCTCTCTGCTCTGTATCAGGACACAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LYNIHILFSSQF*KSLCSVSGHRW Trigger: CCATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAAATGTGTATATTATATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR TCA 72 bp | TTTTCTGTACAATCACTCCCTATATACTTGTGGCACTaGATGCTCAAGTTTTACTCAAGAGTCTTCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FSVQSLPIYLWH*MLKFYSRVFKH Trigger: ATGTTTGAAGACTCTTGAGTAAAACTTGAGCATTCAGTGCCACAAGTATATAGGGAGTGATTGTACAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTGCAGCTCCAGTTCCAGGCCCAGATGGCTGCGCTaGTTCATAGAGGCAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFPAPTWKLLGVCSSSSRPRWLR*FIEADV Trigger: CACGTCTGCCTCTATGAACCAGCGCAGCCATCTGGG...CCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAACCGTGTCCAGGTAGGTaGTGCCCAGATGGCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WWHHSGRSSHRARRDVTEPCPGR*CPDGCA Trigger: AGCGCAGCCATCTGGGCACCACCTACCTGGACACGG...TTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGCCGTGTCCAGGTAGGTaGTGCCCAGATGGCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRPCPGR*CPDGCA Trigger: AGCGCAGCCATCTGGGCACCACCTACCTGGACACGG...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGGGGCACGGAGCTTCATaGAGGTCTCTACCGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRGHGAS*RSLPRL Trigger: AAGGCGCGGTAGAGACCTTCATGAAGCTCCGTGCCC...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCGTCCAAGCCAAGTGCCTGTCACCAGCCTCGGAAAACGGAGGAAATCACTTGATATATCTGGCTaGCCCTCTTCAGCAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGRPSQVPVTSLGKRRKSLDISG*PSSAGG Trigger: TCCCCCTGCTGAAGAGGGGCAGCCAGATATATCAAG...TGATTTCCTCCGTTTTCCGAGGCTGGTGACAGGCACTTGGCTTGGACGACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGCGTCATGGGTGCAGGTaGTCCTTTCCCTCCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRRHGCR*SFPSDV Trigger: CACATCGGAGGGAAAGGACCACCTGCACCCATGACG...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTGAGCTTGAGTTTGAACACCACCAAGCAGTATTCTGAGGTGACCTATTGTCCAGGTAGGTGGTaGCCAGATGGCTGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLSLNTTKQYSEVTYCPGRW*PDGCAG Trigger: ACCAGCGCAGCCATCTGGGCACCACCTACCTGGACA...ATAGGTCACCTCAGAATACTGCTTGGTGGTGTTCAAACTCAAGCTCACCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTCTATCTCTACCGCGCCTTTaGCCGTGTCCAGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGYYIPLHSQLLSKNLPLSLPRL*PCPGRW Trigger: CCACCTACCTGGACACGGCCAAAGGCGCGGTAGAGA...TAGAGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GTCCAGATTGGTCACCTTCTATTAGGCCCAACTTTCCAAAGGCCCCACCCACTCAGCAGGGGGAGGATCTaGTCCTGCCTTTTCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQIGHLLLGPTFQRPHPLSRGRI*SCLFKV Trigger: AACTTTGAAAAGGCAGGACCAGATCCTCCCCCTGCT...GAGTGGGTGGGGCCTTTGGAAAGTTGGGCCTAATAGAAGGTGACCAATCTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGTGAGCTTGAGTTTGAACACCACCAAGCAGTATTCTGAGGTGACCTATCGTCATGGGTGCAGGTaGTCCTTTCCCTCCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLSLNTTKQYSEVTYRHGCR*SFPSDV Trigger: CACATCGGAGGGAAAGGACCACCTGCACCCATGACG...ATAGGTCACCTCAGAATACTGCTTGGTGGTGTTCAAACTCAAGCTCACCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTCTCTGATGGTGTGCTCCAGCTGACTAGACAGCAGCTTCTTAAAAGGAGCAGGGGGAGGATCTaGTCCTGCCTTTTCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSDGVLQLTRQQLLKRSRGRI*SCLFKV Trigger: AACTTTGAAAAGGCAGGACCAGATCCTCCCCCTGCT...CCTTTTAAGAAGCTGCTGTCTAGTCAGCTGGAGCACACCATCAGAGAGACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAACAAAACCCTGGCTGTGTCTAACATGGTCCAAGGTATCAATCCAGATAGGGCACGGAGCTTCATaGAGGTCTCTACCGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTTKPWLCLTWSKVSIQIGHGAS*RSLPRL Trigger: AAGGCGCGGTAGAGACCTTCATGAAGCTCCGTGCCC...TATCTGGATTGATACCTTGGACCATGTTAGACACAGCCAGGGTTTTGTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR TCA 90 bp | TGGTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAAGAATTCAGAGGTAAATaGAGCTCATCCTGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: WWHHSGRSSHRARRDVTEEFRGK*SSSWTP Trigger: TGGTGTCCAGGATGAGCTTCATTTACCTCTGAATTC...TTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR TCA 90 bp | GTGGCATCACAGTGGCAGAAGCAGCCACAGAGCAAGAAGGGATGTGACAGAATTCCAAGGGCCTCTGTATaGTTGGTTGATGGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VASQWQKQPQSKKGCDRIPRASV*LVDGSK Trigger: TTTGGAACCATCAACCAATCATACAGAGGCCCTTGG...AATTCTGTCACATCCCTTCTTGCTCTGTGGCTGCTTCTGCCACTGTGATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGTTACTACATCCCACTCCACAGCCAGCTTTTGAGTAAGAACTTACCTCTACTTTTTGGGATCCCTTaGATGCTTGGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGYYIPLHSQLLSKNLPLLFGIP*MLGSPG Trigger: GCCTGGAGAGCCAAGCATGCAAGGGATCCCAAAAAG...TAGAGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | TTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGATGTCGGCCTCTCAAGAGTaGAGAGGCACACCGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIQLTVLKVSLLCIRTQMSASQE*RGTPAS Trigger: AGACGCCGGTGTGCCTCTCCACTCTTGAGAGGCCGA...CATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCGTCCAAGCCAAGTGCCTGTCACCAGCCTCGGAAAACGGAGGAAATCAGGGCCTCTGTATGATTaGTTGATGGTTCCAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRPSQVPVTSLGKRRKSGPLYD*LMVPKD Trigger: ATCTTTTGGAACCATCAACCAATCATACAGAGGCCC...TGATTTCCTCCGTTTTCCGAGGCTGGTGACAGGCACTTGGCTTGGACGACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| 3UTR CAA 72 bp | TGTTACTTGGCACGAGCCCAGAGGGTGAGCTTGAGTTaGAACACCACCAAGCAGTATTCTGAGGTGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYLARAQRVSLS*NTTKQYSEVTY Trigger: ATAGGTCACCTCAGAATACTGCTTGGTGGTGTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR TCA 90 bp | GTCCAGATTGGTCACCTTCTATTAGGCCCAACTTTCCAAAGGCCCCACCCACTCCTTTCTAGAATAAACTaGGTCAGTGGTGAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQIGHLLLGPTFQRPHPLLSRIN*VSGEGS Trigger: GGAACCTTCACCACTGACTCAGTTTATTCTAGAAAG...GAGTGGGTGGGGCCTTTGGAAAGTTGGGCCTAATAGAAGGTGACCAATCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR TCA 90 bp | TACCTGCTGAGCCATCTCACCACCCCCATCTGCAGAGTAGTTTTGTGTTTGCTTGGTACACTGTGCACTTaGTCTTCATCCTGGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLLSHLTTPICRVVLCLLGTLCT*SSSWPL Trigger: TAAAGGCCAGGATGAAGATCAAGTGCACAGTGTACC...AAGCAAACACAAAACTACTCTGCAGATGGGGGTGGTGAGATGGCTCAGCAGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAACAAAACCCTGGCTGTGTCTAACATGGTCCAAGGTATCAATCCAGATATGCTTGCGTCATGGGTaGAGGTGGTCCTTTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTTKPWLCLTWSKVSIQICLRHG*RWSFPS Trigger: GGAGGGAAAGGACCACCTGCACCCATGACGCAAGCA...TATCTGGATTGATACCTTGGACCATGTTAGACACAGCCAGGGTTTTGTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR GCA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGTGCTTGCGTCATGGGTaGAGGTGGTCCTTTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERNEYSRLSLFPLQLDSECLRHG*RWSFPS Trigger: GGAGGGAAAGGACCACCTGCACCCATGACGCAAGCA...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGCCCAGATGGCTGCGCTaGTTCATAGAGGCAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFIQLTVLKVSLLCIRTQPRWLR*FIEADV Trigger: CACGTCTGCCTCTATGAACCAGCGCAGCCATCTGGG...CTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTGCAGCTCCAGTTCCAGGTCTCCATTTCAGAGTTaGTTTTGCTTTGTGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFPAPTWKLLGVCSSSSRSPFQS*FCFVHF Trigger: AAAGTGCACAAAGCAAAACCAACTCTGAAATGGAGA...CCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| 3UTR CAA 72 bp | GCCCAATGTAGAGACCAATGCAATGTTACATGTTACTaGGCACGAGCCCAGAGGGTGAGCTTGAGTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQCRDQCNVTCY*ARAQRVSLSLN Trigger: GTTCAAACTCAAGCTCACCCTCTGGGCTCGTGCCAAGTAACATGTAACATTGCATTGGTCTCTACATTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCTGTCCAGGTAGGTGGTaGCCAGATGGCTGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPCPGRW*PDGCAG Trigger: ACCAGCGCAGCCATCTGGGCACCACCTACCTGGACA...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAAATAAGACCTGGCTGTaGTTGCGTCATGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSNKTWL*LRHGCR Trigger: CCTGCACCCATGACGCAAGCACAGCCAGGTCTTATT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAATACCCTGCAGCACTTaGAAACCTTTCCTATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSIPCST*KPFLCA Trigger: GGCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTAT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR TCA 90 bp | ATACCACTTACCCAGGGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAAGGTACACTGTGCACTTaGTCTTCATCCTGGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: IPLTQGAKLPTQEEALWKGTLCT*SSSWPL Trigger: TAAAGGCCAGGATGAAGATCAAGTGCACAGTGTACC...TTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCCCTGGGTAAGTGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR GCA 90 bp | CATTTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGAATAAGACCTGGCTGTaGTTGCGTCATGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFIQLTVLKVSLLCIRTQNKTWL*LRHGCR Trigger: CCTGCACCCATGACGCAAGCACAGCCAGGTCTTATT...CTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | GAATTTAGGGTCTGCATAGAGACCCACTCTCATGAGAACCAACAGCAGAACTATAGGTCTAGCAACCTGTaGGGGACATCCTCCGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EFRVCIETHSHENQQQNYRSSNL*GTSSEI Trigger: TATTTCGGAGGATGTCCCCCACAGGTTGCTAGACCT...ATAGTTCTGCTGTTGGTTCTCATGAGAGTGGGTCTCTATGCAGACCCTAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAAGGTCTAGCAACCTGTaGGGGACATCCTCCGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSRSSNL*GTSSEI Trigger: TATTTCGGAGGATGTCCCCCACAGGTTGCTAGACCT...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATATCGGCCTCTCAAGAGTaGAGAGGCACACCGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWMMVVHITQGKVDNFLISASQE*RGTPAS Trigger: AGACGCCGGTGTGCCTCTCCACTCTTGAGAGGCCGA...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAGGGTTTAATAAGACCTaGCTGTGCTTGCGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSGFNKT*LCLRHG Trigger: CCCATGACGCAAGCACAGCCAGGTCTTATTAAACCC...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | TGTAACTCACACATCCAAAGTGAGTCTTGCTCCTCCTaGGAGAGCCTCCTGGTTATCATAAAGTGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CNSHIQSESCSS*ESLLVIIKCSS Trigger: ACTGCTGCACTTTATGATAACCAGGAGGCTCTCCAAGGAGGAGCAAGACTCACTTTGGATGTGTGAGTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR TCA 90 bp | TTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGATGATACCCTGCAGCACTTaGAAACCTTTCCTATGCGCC | + |
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Preference number: 4 (lower is better) Translates to: FIQLTVLKVSLLCIRTQMIPCST*KPFLCA Trigger: GGCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTAT...CATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR TCA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGCCAAGGGCCTCTGTATaGTTGGTTGATGGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: ERNEYSRLSLFPLQLDSEPRASV*LVDGSK Trigger: TTTGGAACCATCAACCAATCATACAGAGGCCCTTGG...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR GCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCCTTGATATATCTGGCTaGCCCTCTTCAGCAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPLDISG*PSSAGG Trigger: TCCCCCTGCTGAAGAGGGGCAGCCAGATATATCAAG...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | AGTGGGGGTTACTACATCCCACTCCACAGCCAGCTTTaGAGTAAGAACTTACCTCTAGCTCTCTCAAATTAT | + |
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Preference number: 4 (lower is better) Translates to: SGGYYIPLHSQL*SKNLPLALSNY Trigger: ATAATTTGAGAGAGCTAGAGGTAAGTTCTTACTCAAAAGCTGGCTGTGGAGTGGGATGTAGTAACCCCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR CAA 72 bp | CAAGGATTCTGTAGAAACTTCACTAGCTTGACTAACTaGCCCACCATCTTTGAAAGGCAAAAGCCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGFCRNFTSLTN*PTIFERQKPEV Trigger: CACCTCAGGCTTTTGCCTTTCAAAGATGGTGGGCAAGTTAGTCAAGCTAGTGAAGTTTCTACAGAATCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR TCA 90 bp | ATACCACTTACCCAGGGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAACTCTGTATGATTGGTTaGTGGTTCCAAAAGATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPLTQGAKLPTQEEALWKLCMIG*WFQKIR Trigger: CCTAATCTTTTGGAACCATCAACCAATCATACAGAG...TTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCCCTGGGTAAGTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR GCA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATACTTTTTGGGATCCCTTaGATGCTTGGCTCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FWMMVVHITQGKVDNFLILFGIP*MLGSPG Trigger: GCCTGGAGAGCCAAGCATGCAAGGGATCCCAAAAAG...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTGAGCTTGAGTTTGAACACCACCAAGCAGTATTCTGAGGTGACCTATTTAGTGGCTTCTTTATaGAGAGGAAGGGGTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: QRVSLSLNTTKQYSEVTYLVASL*RGRGLI Trigger: TATTAAACCCCTTCCTCTGCATAAAGAAGCCACTAA...ATAGGTCACCTCAGAATACTGCTTGGTGGTGTTCAAACTCAAGCTCACCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CCA 90 bp | GGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAACACTCAAGTAATACCTTTAGTAAAGCAACCTaGAACCCAGTGTACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAKLPTQEEALWKHSSNTFSKAT*NPVYSF Trigger: GAAGGAGTACACTGGGTTCCAGGTTGCTTTACTAAA...GGTATTACTTGAGTGTTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCAGGGCCTCTGTATGATTaGTTGATGGTTCCAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSGPLYD*LMVPKD Trigger: ATCTTTTGGAACCATCAACCAATCATACAGAGGCCC...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR TCA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCACTCTGTATGATTGGTTaGTGGTTCCAAAAGATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRDESHVLQSCTANISKSLCMIG*WFQKIR Trigger: CCTAATCTTTTGGAACCATCAACCAATCATACAGAG...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTTTGAGTAAGAACTTACCTCTAGCTCTCTCAAATTATTCATTTTCCGTGGGGTTTAATAAGACCTaGCTGTGCTTGCGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSKNLPLALSNYSFSVGFNKT*LCLRHG Trigger: CCCATGACGCAAGCACAGCCAGGTCTTATTAAACCC...CACGGAAAATGAATAATTTGAGAGAGCTAGAGGTAAGTTCTTACTCAAAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| 3UTR CAA 72 bp | AAAGCTACCTACCAACCAGTGGTGGGAATTAAATCCTaGCTTAAAGAACCTTGTGTGCTTCATCCTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KATYQPVVGIKS*LKEPCVLHPLD Trigger: ATCCAAAGGATGAAGCACACAAGGTTCTTTAAGCAAGGATTTAATTCCCACCACTGGTTGGTAGGTAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCGAATTCAGAGGTAAATaGAGCTCATCCTGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPEFRGK*SSSWTP Trigger: TGGTGTCCAGGATGAGCTTCATTTACCTCTGAATTC...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAACACTCAAGTAATACCTCTCCATTTCAGAGTTaGTTTTGCTTTGTGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAKLPTQEEALWKHSSNTSPFQS*FCFVHF Trigger: AAAGTGCACAAAGCAAAACCAACTCTGAAATGGAGA...GGTATTACTTGAGTGTTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR GCA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGTTAGTGGCTTCTTTATaGAGAGGAAGGGGTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: ERNEYSRLSLFPLQLDSELVASL*RGRGLI Trigger: TATTAAACCCCTTCCTCTGCATAAAGAAGCCACTAA...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | ATAAAATACCCATCCCCAAATATATCCTCCCTTGCCTaGGCTAACAAGGATTCTGTAGAAACTTCACTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKYPSPNISSLA*ANKDSVETSLA Trigger: AGCTAGTGAAGTTTCTACAGAATCCTTGTTAGCCAAGGCAAGGGAGGATATATTTGGGGATGGGTATTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | TGGCCTCAAAAGGAAGAGATTCTCAGTAAAGAGCTGTaGGCAATTCTCAGTAGTGTTCAAAACAACAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WPQKEEILSKEL*AILSSVQNNSM Trigger: CATACTGTTGTTTTGAACACTACTGAGAATTGCCAACAGCTCTTTACTGAGAATCTCTTCCTTTTGAGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR GCA 90 bp | TTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGATGTTTCAGAGTTGGTTTTaGTTTGTGCACTTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FIQLTVLKVSLLCIRTQMFQSWF*FVHFEQ Trigger: TTGTTCAAAGTGCACAAAGCAAAACCAACTCTGAAA...CATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CCA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATATTTAGTAAAGCAACCTaGAACCCAGTGTACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWMMVVHITQGKVDNFLIFSKAT*NPVYSF Trigger: GAAGGAGTACACTGGGTTCCAGGTTGCTTTACTAAA...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | GTCTTTCTCAAAAGCTACTTAGTACTCCTAGTACTTTaGCACACAACAGAACAGTGTCTCAATGAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFLKSYLVLLVL*HTTEQCLNEKM Trigger: CATCTTTTCATTGAGACACTGTTCTGTTGTGTGCAAAAGTACTAGGAGTACTAAGTAGCTTTTGAGAAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | AAGCTTTCTAAGTTCTCTCATTCCTATTTACTAAGCTaGTCTTTGAAACTGTCAGCACACACATCTAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLSKFSHSYLLS*SLKLSAHTSSY Trigger: GTAGCTAGATGTGTGTGCTGACAGTTTCAAAGACAAGCTTAGTAAATAGGAATGAGAGAACTTAGAAAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | AAGATCCTGTTATTTTACACTCCTTGGGGGTTCATTTaGGAAATTGTAGTAAAGGAAGAAGATCTGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KILLFYTPWGFI*EIVVKEEDLRI Trigger: AATTCTCAGATCTTCTTCCTTTACTACAATTTCCAAAATGAACCCCCAAGGAGTGTAAAATAACAGGATCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| 3UTR CAA 72 bp | AAATCCTTGCTTAAAGAACCTTGTGTGCTTCATCCTTaGGATGTACACATTAACTATTTCTTTGACACATGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLLKEPCVLHP*DVHINYFFDTC Trigger: ACATGTGTCAAAGAAATAGTTAATGTGTACATCCAAAGGATGAAGCACACAAGGTTCTTTAAGCAAGGATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCAGCACCCACATGGAAACTCCTAGGAGTCTGCAGCTCCAGTTCCAGGAATACCCTGCAGCACTaGAAAACCTTTCCTATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CFPAPTWKLLGVCSSSSRNTLQH*KTFPMR Trigger: GCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTATT...CCTGGAACTGGAGCTGCAGACTCCTAGGAGTTTCCATGTGGGTGCTGGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS TCA 90 bp | TCTAGCAACCTGTGGGGGACATCCTCCGAAATACCCTGCAGCACTTaGAAACCTTTCCTATGCGCCATTGACAACCCATGTGACCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSNLWGTSSEIPCST*KPFLCAIDNPCDRL Trigger: AAGCCGGTCACATGGGTTGTCAATGGCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTATTTCGGAGGATGTCCCCCACAGGTTGCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053959.7 ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTCGTCCAAGCCAAGTGCCTGTCACCAGCCTCGGAAAACGGAGGAAATCATGGCCTTTAAGAAATTaGCGGGTGCTCTTTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGRPSQVPVTSLGKRRKSWPLRN*RVLFKR Trigger: CCTTTTAAAGAGCACCCGCAAATTTCTTAAAGGCCA...TGATTTCCTCCGTTTTCCGAGGCTGGTGACAGGCACTTGGCTTGGACGACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | TTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGATGCTTTCCTATGCGCCATaGACAACCCATGTGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIQLTVLKVSLLCIRTQMLSYAP*TTHVTG Trigger: GCCGGTCACATGGGTTGTCAATGGCGCATAGGAAAG...CATCTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | CATTTTATTCAGCTCACAGTTCTGAAAGTCTCTCTGCTCTGTATCAGGACACAGTCTTTTTGGGATCCCTaGCATGCTTGGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFIQLTVLKVSLLCIRTQSFWDP*HAWLSR Trigger: CCTGGAGAGCCAAGCATGCAAGGGATCCCAAAAAGA...CTGTGTCCTGATACAGAGCAGAGAGACTTTCAGAACTGTGAGCTGAATAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | GAATTTAGGGTCTGCATAGAGACCCACTCTCATGAGAACCAACAGCAGAACTATTCCTGTACTACTTTTTaGCCTACGGATCCGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: EFRVCIETHSHENQQQNYSCTTF*PTDPMT Trigger: AGTCATCGGATCCGTAGGCAAAAAAGTAGTACAGGA...ATAGTTCTGCTGTTGGTTCTCATGAGAGTGGGTCTCTATGCAGACCCTAAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | ATACCACTTACCCAGGGAGCCAAGCTTCCAACACAAGAAGAAGCTTTGTGGAAATTATACTTTGCACTATaGCTCACATACACCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IPLTQGAKLPTQEEALWKLYFAL*LTYTCQ Trigger: TTGGCAGGTGTATGTGAGCAATAGTGCAAAGTATAA...TTTCCACAAAGCTTCTTCTTGTGTTGGAAGCTTGGCTCCCTGGGTAAGTGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATATCTTTTTGGGATCCCTaGCATGCTTGGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWMMVVHITQGKVDNFLISFWDP*HAWLSR Trigger: CCTGGAGAGCCAAGCATGCAAGGGATCCCAAAAAGA...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGGATGAGAGCCATGTACTGCAGTCCTGCACAGCAAATATTAGCAAATCATTATACTTTGCACTATaGCTCACATACACCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FRDESHVLQSCTANISKSLYFAL*LTYTCQ Trigger: TTGGCAGGTGTATGTGAGCAATAGTGCAAAGTATAA...TGATTTGCTAATATTTGCTGTGCAGGACTGCAGTACATGGCTCTCATCCCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTTTCTTTACAGGGTTTGTCTTCAGTATCGGAAGAGTTTCAAATCCCCTCCTGTACTACTTTTTaGCCTACGGATCCGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: VSFSLQGLSSVSEEFQIPSCTTF*PTDPMT Trigger: AGTCATCGGATCCGTAGGCAAAAAAGTAGTACAGGA...GGGGATTTGAAACTCTTCCGATACTGAAGACAAACCCTGTAAAGAAAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTTTGAGTAAGAACTTACCTCTAGCTCTCTCAAATTATTCATTTTCCGTGAATACCCTGCAGCACTaGAAAACCTTTCCTATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSKNLPLALSNYSFSVNTLQH*KTFPMR Trigger: GCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTATT...CACGGAAAATGAATAATTTGAGAGAGCTAGAGGTAAGTTCTTACTCAAAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | CAAACAACAAAACCCTGGCTGTGTCTAACATGGTCCAAGGTATCAATCCAGATAATTCTCTTCGGCACTTaGTTCTTTATTTCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTTKPWLCLTWSKVSIQIILFGT*FFISWL Trigger: GAGCCAAGAAATAAAGAACAAAGTGCCGAAGAGAAT...TATCTGGATTGATACCTTGGACCATGTTAGACACAGCCAGGGTTTTGTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053959.7 |
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| CDS-3UTR CAA 90 bp | GAAAGAAATGAGTACAGCCGTCTAAGTCTGTTTCCTCTCCAGTTAGATTCTGAGATTCTCTTCGGCACTTaGTTCTTTATTTCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERNEYSRLSLFPLQLDSEILFGT*FFISWL Trigger: GAGCCAAGAAATAAAGAACAAAGTGCCGAAGAGAAT...CTCAGAATCTAACTGGAGAGGAAACAGACTTAGACGGCTGTACTCATTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS-3UTR CAA 90 bp | TTCTGGATGATGGTTGTTCACATTACCCAAGGCAAAGTGGATAATTTTCTGATATGGCCTTTAAGAAATTaGCGGGTGCTCTTTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWMMVVHITQGKVDNFLIWPLRN*RVLFKR Trigger: CCTTTTAAAGAGCACCCGCAAATTTCTTAAAGGCCA...TATCAGAAAATTATCCACTTTGCCTTGGGTAATGTGAACAACCATCATCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223585.2 |
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| CDS TCA 72 bp | CTGTGGGGGACATCCTCCGAAATACCCTGCAGCACTTaGAAACCTTTCCTATGCGCCATTGACAACCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LWGTSSEIPCST*KPFLCAIDNPC Trigger: ACATGGGTTGTCAATGGCGCATAGGAAAGGTTTTCAAGTGCTGCAGGGTATTTCGGAGGATGTCCCCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053959.7 ENSMUST00000223585.2 |
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