RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INTS5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071652

Ensembl transcript IDs: ENSMUST00000096249.7

Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCACTGGACGAGGAGGTaGGGGTGGGCCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHHWTRR*GWAQHP
Trigger: GGGGTGCTGGGCCCACCCCCACCTCCTCGTCCAGTG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACACGGTGGCTCGTGCATaGTCCTCTGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHTVARA*SSGGQA
Trigger: GGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACGGGCCCTCACCACCCTaGTGCTCCCACCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHGPSPP*CSHPTN
Trigger: GTTGGTGGGGTGGGAGCAGCAGGGTGGTGAGGGCCC...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGGAGGTGGACGGAGGTaGGGTGGACCAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNGGGRR*GGPATG
Trigger: TCCTGTGGCTGGTCCACCTCACCTCCGTCCACCTCC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTCTTGGGACAGCTCCTaGGCACTGAGAGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNSWDSS*ALRGAG
Trigger: TCCCGCGCCTCTCAGTGCTCAGGAGCTGTCCCAAGA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACATGTGCGGGTGGCCCTaGAGCCCATCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNMCGWP*SPSTAA
Trigger: TGCAGCTGTGGATGGGCTGCAGGGCCACCCGCACAT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGCAGTAGCACAGGGCTaGGGGAGCAGCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNAVAQG*GSSCYQ
Trigger: CTGGTAGCAGCTGCTCCCCCAGCCCTGTGCTACTGC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGCCGAGCAAAGCTGGTaGCATGACTGCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNAEQSW*HDCQLQ
Trigger: CTGCAGCTGGCAGTCATGTCACCAGCTTTGCTCGGC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACAAGAAGCTGAGAGGCTaGAGCCACACCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNKKLRG*SHTRRA
Trigger: GGCCCTCCTGGTGTGGCTTCAGCCTCTCAGCTTCTT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGGCTTCCCTCAGCCATaGCAGCCACCAGGATACAGG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNGFPQP*QPPGYR
Trigger: CCTGTATCCTGGTGGCTGTCATGGCTGAGGGAAGCC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACAGGGACATGGGATGGTaGAGGTGGACGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNRDMGW*RWTEVR
Trigger: CCTCACCTCCGTCCACCTCCACCATCCCATGTCCCT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACGGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHGCPGL*VGPDKL
Trigger: GAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCC...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGCTTTGGCTGCCTCTaGGCTCAGGGTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVACFGCL*AQGGSP
Trigger: GGGGCTCCCACCCTGAGCCCAGAGGCAGCCAAAGCA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACTCACCGCAACTGCTTTaGCTGCCTCTGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSPQLL*LPLGSG
Trigger: CCCTGAGCCCAGAGGCAGCCAAAGCAGTTGCGGTGA...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGATCCCGCTCCACGGTaGCTCGTGCATGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNDPAPR*LVHDPL
Trigger: CAGAGGATCATGCACGAGCCACCGTGGAGCGGGATC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCGAGAGGCTTCCCAATaGCTCAAGAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNREASQ*LKRAAS
Trigger: GCTGGCTGCCCTCTTGAGCCATTGGGAAGCCTCTCG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACTGGGCAGCTACCAATaGGGGCCGAGAGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVALGSYQ*GPRGTA
Trigger: TGCAGTGCCTCTCGGCCCTCATTGGTAGCTGCCCAG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGCTCTGCTCAGTAGATaGCCCAAGGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNALLSR*PKASGP
Trigger: TGGACCTGAGGCCTTGGGTCATCTACTGAGCAGAGC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTGCACTAATCACGGGTaGCCAGGCCTTTGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNCTNHG*PGLWVG
Trigger: GCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTGGCGGGAAGCCAGGTaGCCTAGGATGCCTACAACT +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNWREAR*PRMPTT
Trigger: AGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGCAGCCCGAGCAGGTaGCAAAGAACGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSSPSR*QRTEQE
Trigger: CTCTTGCTCCGTTCTTTGCCACCTGCTCGGGCTGCT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACTCTAGGGCAGCTAGGTaGGCCCGGACACTCTCATCA +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSRAAR*ARTLSS
Trigger: TGATGAGAGTGTCCGGGCCCACCTAGCTGCCCTAGA...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACTGGACGGAGGTGAGGTaGACCAGCCACAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHWTEVR*TSHRTF
Trigger: GAAAGTCCTGTGGCTGGTCCACCTCACCTCCGTCCA...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGTAGGGACATGGGATaGTGGAGGTGGACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSRDMG*WRWTEV
Trigger: CACCTCCGTCCACCTCCACCATCCCATGTCCCTACT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACTCTCTCACGGTGTCTaGCACAGCCAGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVALSHGV*HSQALG
Trigger: ACCCAGGGCCTGGCTGTGCCAGACACCGTGAGAGAG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACATCAAGAAAGGGCACTaGACGAGGAGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHIKKGH*TRRWGW
Trigger: CCACCCCCACCTCCTCGTCCAGTGCCCTTTCTTGAT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACAGCCTTGAGCCCAGCTaGGGAAGTCTGAGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNSLEPS*GSLRKA
Trigger: CGCCTTTCTCAGACTTCCCCAGCTGGGCTCAAGGCT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATCGTGCATGATCCTCTaGGGGCCAGGCCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASCMIL*GPGQLS
Trigger: GCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACGCAAAGCTGGTGACATaGCTGCCAGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHAKLVT*LPAAVG
Trigger: TCCTACTGCAGCTGGCAGTCATGTCACCAGCTTTGC...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGCACTGCTGGGGGCTTaGGGCAGTCCACAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAALLGA*GSPQVL
Trigger: GAGAACTTGTGGACTGCCTCAAGCCCCCAGCAGTGC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGCTGTAGGACAGCCTTaGGCCCAGCTGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAAVGQP*AQLGKS
Trigger: AGACTTCCCCAGCTGGGCTCAAGGCTGTCCTACAGC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTCCAGCATGGAAAACTaGCCAGATCCCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNSSMEN*PDPSRT
Trigger: GGTCCTGGAGGGATCTGGTCAGTTTTCCATGCTGGA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGGACCCGGCACTGCTaGAGTATGCCTCCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHRTRHC*SMPPVN
Trigger: ATTAACCGGAGGCATACTGCAGCAGTGCCGGGTCCT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATCCAGGACCCGGCACTaGTGCAGTATGCCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASRTRH*CSMPPV
Trigger: AACCGGAGGCATACTGCAGCAGTGCCGGGTCCTGGA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCGGTGGAGGACACTGTaGAGCACAGACAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNRWRTL*STDRCG
Trigger: ACCACATCTGTCTGTGCTGCACAGTGTCCTCCACCG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGTGGATGGCGGAGGTaGTTGAAAGCGGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSGWRR*LKAARE
Trigger: TTCTCTGGCCGCTTTCAAGCACCTCCGCCATCCACT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCGAGCTGAGAGCTGGTaGCCCAGAATAGGGTCTACA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNRAESW*PRIGST
Trigger: TGTAGACCCTATTCTGGGCCACCAGCTCTCAGCTCG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTCACGAGCTGAGAGCTaGTGGCCCAGAATAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNSRAES*WPRIGS
Trigger: AGACCCTATTCTGGGCCACCAGCTCTCAGCTCGTGA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCACCAGTAGGGACATaGGATGGTGGAGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPPVGT*DGGGGR
Trigger: CCGTCCACCTCCACCATCCCATGTCCCTACTGGTGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGTTTTTCCCCAGGGATaGCAGGAGATCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNVFPQG*QEIQGR
Trigger: CCTTCCCTGGATCTCCTGCCATCCCTGGGGAAAAAC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGTAGGCCCAGGAGCTaGTGTTGCCAGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASRPRS*CCQRKR
Trigger: GCGCTTCCTCTGGCAACACCAGCTCCTGGGCCTACT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACAGATGCCAGGGGGAGTaGGTTGTATCAGGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNRCQGE*VVSGCR
Trigger: TCGACACCCTGATACAACCCACTCCCCCTGGCATCT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCATATTACCCAGGGCTaGTGGCAAGAGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHHITQG*WQEASL
Trigger: GAGGGAAGCCTCTTGCCACCAGCCCTGGGTAATATG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACTGGAAGATGAACTTCTaGGGCAAGGGCCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNWKMNF*GKGPCS
Trigger: GGAGCATGGGCCCTTGCCCCAGAAGTTCATCTTCCA...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCGGCCACGTTCAGACTaGAAGATGAACTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNRPRSD*KMNFWG
Trigger: GCCCCAGAAGTTCATCTTCCAGTCTGAACGTGGCCG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCAGCACAGACAGATGTaGTCCTCCTTCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHQHRQM*SSFSST
Trigger: GGTGGAGCTGAAGGAGGACCACATCTGTCTGTGCTG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGCTGCAGCAGTTCATTaGGAGAGCCAGTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAAAAVH*ESQWHG
Trigger: CCCATGCCACTGGCTCTCTCAATGAACTGCTGCAGC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGGCGGGTAAGAAGCTaGGAGGCTGAAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVARRVRS*EAEATP
Trigger: TGGTGTGGCTTCAGCCTCTCAGCTTCTTACCCGCCT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCAGCTGGGGAAGTCTaGGAAAGGCGGGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPAGEV*ERRVRS
Trigger: GCTTCTTACCCGCCTTTCTCAGACTTCCCCAGCTGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACTCACACAGCACCTGCTaGACTTCATGCACCACATCC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSHSTC*TSCTTS
Trigger: GGATGTGGTGCATGAAGTGCAGCAGGTGCTGTGTGA...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGAGGTCAATGGACCATaGACTAATCACGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNEVNGP*TNHGCP
Trigger: TGGGCACCCGTGATTAGTGCATGGTCCATTGACCTC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCAGCCCATCCACAGCTaGAGCAGTTCATTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNQPIHS*SSSLRE
Trigger: CTCTCTCAATGAACTGCTGCAGCTGTGGATGGGCTG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAACAGTTCCCGTCGGATaGTGTCTCCATGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVATVPVG*CLHGGK
Trigger: CTTCCCGCCATGGAGACAGCATCCGACGGGAACTGT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGACATGACTGCCAGCTaGAGTAGGAAGGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNDMTAS*SRKGTV
Trigger: CACAGTTCCCTTCCTACTGCAGCTGGCAGTCATGTC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGCCTGGCTCACTAGATaGACAGCCAGGTTTAGCATG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNAWLTR*TARFSM
Trigger: CATGCTAAACCTGGCTGTGCATCTAGTGAGCCAGGC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACACCAGGATACAGGATaGCTCCAGATGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAHQDTG*LQMPGG
Trigger: TCCCCCTGGCATCTGGAGGCATCCTGTATCCTGGTG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCAGGCGATCGATGTTaGGGTGGAGGACACTGTGCA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPGDRC*GGGHCA
Trigger: TGCACAGTGTCCTCCACCGCAACATCGATCGCCTGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACATCCACACATGCATCTaGGCAGCTACCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHIHTCI*AATNEG
Trigger: GCCCTCATTGGTAGCTGCCCAGATGCATGTGTGGAT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGCATGTTCACGAGCTaGGAGCTGGTGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASMFTS*ELVAQN
Trigger: ATTCTGGGCCACCAGCTCTCAGCTCGTGAACATGCT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACACGCTGATGCTGACCTaGATATGTGCTGCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHTLMLT*ICAAQL
Trigger: CAACTGAGCAGCACATATTCAGGTCAGCATCAGCGT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACATAGGACTCGGGAGATaGTGGTGCCAGGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNIGLGR*WCQEKK
Trigger: CTTCTTTTCCTGGCACCATCATCTCCCGAGTCCTAT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAAGGGAACTGTGGCCTaGAGAGAGGGCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAKGTVA*REGSPF
Trigger: GAATGGAGAGCCCTCTCTTCAGGCCACAGTTCCCTT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGAAGAAACCGGGCTGTaGAGGGAGGCTGTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAEETGL*REAVKS
Trigger: GGACTTTACAGCCTCCCTTCACAGCCCGGTTTCTTC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGTTCAGACTGGAAGATaGACTTCTGGGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAVQTGR*TSGARA
Trigger: GGCCCTTGCCCCAGAAGTTCATCTTCCAGTCTGAAC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACACCTGCTGCACTTCATaGACCACATCCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHTCCTS*TTSSKP
Trigger: TGGCTTAGAGGATGTGGTGCATGAAGTGCAGCAGGT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGATGTCCATTAATGTaGGGGTGGCCCTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVARCPLM*GWPCSP
Trigger: TGGGCTGCAGGGCCACCCGCACATTAATGGACATCT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCAAGGCATCCACACATaGATCTGGGCAGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHQGIHT*IWAATN
Trigger: ATTGGTAGCTGCCCAGATGCATGTGTGGATGCCTTG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACGTTCTCCAGATACTGTaGCGAGCAAAGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHVLQIL*RAKLVT
Trigger: TGTCACCAGCTTTGCTCGGCACAGTATCTGGAGAAC...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCCTGCAGGTGTTGTTaGAGCTGGCTTAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPCRCC*SWLSTA
Trigger: AGCAGTGCTAAGCCAGCTGCAACAACACCTGCAGGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACAGGGCTTCTGGCTCTaGTCAGTAGATGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAQGFWL*SVDDPR
Trigger: CCTTGGGTCATCTACTGAGCAGAGCCAGAAGCCCTG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACAAAACACCTCTCAAGTaGTCCAACACAGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNKTPLK*SNTAAR
Trigger: TCGGGCTGCTGTGTTGGACCACTTGAGAGGTGTTTT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCAACTGAGGCAATCTTaGGTACCCGTTTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHQLRQS*VPVFPQ
Trigger: CTGGGGAAAAACGGGTACCCAAGATTGCCTCAGTTG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGTAGCAATAGCAGCTaGATCAGCCGGTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVACSNSS*ISRSQA
Trigger: GGCCTGTGACCGGCTGATCCAGCTGCTATTGCTACA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACACTCTTCAGGGCTTCTaGCTCTGCTCAGTAGATGAC +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHTLQGF*LCSVDD
Trigger: GTCATCTACTGAGCAGAGCCAGAAGCCCTGAAGAGT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACGATCGATGTTGCGGTaGAGGACACTGTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVARSMLR*RTLCST
Trigger: TGTGCTGCACAGTGTCCTCCACCGCAACATCGATCG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGCTCAGTTGTCCCATaGGGTCAATGGACCATGCAC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVACSVVP*GQWTMH
Trigger: GTGCATGGTCCATTGACCTCATGGGACAACTGAGCA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGAAGGCCAGAGAGACTaGCCACTAGCCCTGCATATA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAEGQRD*PLALHI
Trigger: TATATGCAGGGCTAGTGGTCAGTCTCTCTGGCCTTC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCAGGTGCCCTAGGATaGCTACAACTGAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPGALG*LQLRQS
Trigger: AGATTGCCTCAGTTGTAGGCATCCTAGGGCACCTGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGTAAAGTCCCTGCATaGACTCGAGCCAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVACKVPA*TRARQL
Trigger: AAGCTGCCTGGCTCGAGTGCATGCAGGGACTTTACA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGGAAAGGGACATATTaGAAGGAGGGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVARKGTY*KEGGSS
Trigger: GCTGCTGCCTCCCTCCTTGCAATATGTCCCTTTCCT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAACACCAGGAGGGCCATaGAGCCTTAGAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVATPGGP*SLREEK
Trigger: CTTCTCTTCTCTAAGGCTGCATGGCCCTCCTGGTGT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCAAATAGTTCTGTGTTaGCCCGATGTAAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNQIVLC*PDVRLP
Trigger: AGGGAGCCTTACATCGGGGCAACACAGAACTATTTG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGTCTAGCTCTTCTCTaGGGAACCCCTGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVACLALL*GTPAGV
Trigger: AACACCTGCAGGGGTTCCCCAGAGAAGAGCTAGACA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGCCCTGCATATAGCTaGGTTGCCAAACTCAACTCT +
Preference number: 4 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSPAYS*VAKLNS
Trigger: AGAGTTGAGTTTGGCAACCCAGCTATATGCAGGGCT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCCGATAACTCCAGCATaGAAAACTGACCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNPITPA*KTDQIP
Trigger: AGGGATCTGGTCAGTTTTCCATGCTGGAGTTATCGG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACCTGCCAAACTATCATaGAACATGCGCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAPAKLS*NMRNSS
Trigger: GGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCACTGGGTAGTAATAACTaGAGCAGGCATAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVALGSNN*SRHSCV
Trigger: GACACAGCTATGCCTGCTTCAGTTATTACTACCCAG...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR TCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGTTAATGTCCAACAATaGGGCAGAAGCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAVNVQQ*GRSQRG
Trigger: ACCCCTTTGGCTTCTGCCTCATTGTTGGACATTAAC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATCAAAGTGTGGGGAATaGTGGACAGAAGTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASKCGE*WTEVSS
Trigger: GCTAGACACTTCTGTCCAGCATTCCCCACACTTTGA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATGGCTAAATACCTCGTaGATATTACCCAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAWLNTS*ILPRAG
Trigger: ACCAGCCCTGGGTAATATGCACGAGGTATTTAGCCA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR GCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAACGCACTTCAAAAGGTaGCAGTTGGCTAAATACCTC +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVATHFKR*QLAKYL
Trigger: GAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAAAGAAGAGCCAATATaGGCCACAACCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAKEEPI*ATTQSK
Trigger: CTTTGACTGGGTTGTGGCCCATATTGGCTCTTCTTT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAAGAGAAGAGAAGAAGTaGTGTACTCCAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAREEKK*CTPALT
Trigger: AGTGAGAGCTGGAGTACACCACTTCTTCTCTTCTCT...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CCA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATCAAAAGGTGCCAGTTaGCTAAATACCTCGTGCATA +
Preference number: 4 (lower is better)
Translates to: KVTPLITYGLRSIHPSVASKGAS*LNTSCI
Trigger: TATGCACGAGGTATTTAGCCAACTGGCACCTTTTGA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CCGGAAGCGCCTACCAATTCGGAGATCCCGCTCCACGGTGGCTCGTaGATGATCCTCTGGGGGCCAGGCCAGCTCAGCACCAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: PEAPTNSEIPLHGGS*MILWGPGQLSTSCI
Trigger: GATGCAGCTGGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGGTAGGCGCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp GTTGTTCCCGGAAGCGCCTACCAATTCGGAGATCCCGCTCCACGGTaGCTCGTGCATGATCCTCTGGGGGCCAGGCCAGCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: VVPGSAYQFGDPAPR*LVHDPLGARPAQHQ
Trigger: CTGGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGGTAGGCGCTTCCGGGAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp AAGCGCCTACCAATTCGGAGATCCCGCTCCACGGTGGCTCGTGCATaGTCCTCTGGGGGCCAGGCCAGCTCAGCACCAGCTGCATCAGGA +
Preference number: 5 (lower is better)
Translates to: KRLPIRRSRSTVARA*SSGGQASSAPAASG
Trigger: TCCTGATGCAGCTGGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGGTAGGCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CCAGAGAAGAGCCCCAGGCGATCGATGTTGCGGTGGAGGACACTGTaGAGCACAGACAGATGTGGTCCTCCTTCAGCTCCACCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PEKSPRRSMLRWRTL*STDRCGPPSAPPSL
Trigger: CAGGGAGGGTGGAGCTGAAGGAGGACCACATCTGTCTGTGCTGCACAGTGTCCTCCACCGCAACATCGATCGCCTGGGGCTCTTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp GAGGGCTCTCCATTCCGGCCCCCAGAACCCCCTGCCAAACTATCATaGAACATGCGCAACAGTTCCCGTCGGATGCTGTCTCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: EGSPFRPPEPPAKLS*NMRNSSRRMLSPWR
Trigger: CCGCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCCGGAATGGAGAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp CGTGCATATTACCCAGGGCTGGTGGCAAGAGGCTTCCCTCAGCCATaGCAGCCACCAGGATACAGGATGCCTCCAGATGCCAGGGGGAGT +
Preference number: 5 (lower is better)
Translates to: RAYYPGLVARGFPQP*QPPGYRMPPDARGS
Trigger: ACTCCCCCTGGCATCTGGAGGCATCCTGTATCCTGGTGGCTGTCATGGCTGAGGGAAGCCTCTTGCCACCAGCCCTGGGTAATATGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CCCGTCGGATGCTGTCTCCATGGCGGGAAGCCAGGTGCCCTAGGATaGCTACAACTGAGGCAATCTTGGGTACCCGTTTTTCCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PVGCCLHGGKPGALG*LQLRQSWVPVFPQG
Trigger: TCCCTGGGGAAAAACGGGTACCCAAGATTGCCTCAGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp GCTCCCACCCCACCAACAAGGCCAAATTTCGAAGAAACCGGGCTGTaGAGGGAGGCTGTAAAGTCCCTGCATGCACTCGAGCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: APTPPTRPNFEETGL*REAVKSLHALEPGS
Trigger: GCTGCCTGGCTCGAGTGCATGCAGGGACTTTACAGCCTCCCTTCACAGCCCGGTTTCTTCGAAATTTGGCCTTGTTGGTGGGGTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp GCCCAGGCCTTTGGGTTGGCCCGGATAAACTCACACAGCACCTGCTaGACTTCATGCACCACATCCTCTAAGCCAGGTCCACCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: AQAFGLARINSHSTC*TSCTTSSKPGPPVG
Trigger: CCCTACTGGTGGACCTGGCTTAGAGGATGTGGTGCATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CTCCATTCCGGCCCCCAGAACCCCCTGCCAAACTATCATGAAACATaGGCAACAGTTCCCGTCGGATGCTGTCTCCATGGCGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LHSGPQNPLPNYHET*ATVPVGCCLHGGKP
Trigger: TGGCTTCCCGCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCCGGAATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp TTTCGAAGAAACCGGGCTGTGAAGGGAGGCTGTAAAGTCCCTGCATaGACTCGAGCCAGGCAGCTTCGGAAGGCCAGGGGAAGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: FRRNRAVKGGCKVPA*TRARQLRKARGRRP
Trigger: TGGCCTTCTTCCCCTGGCCTTCCGAAGCTGCCTGGCTCGAGTGCATGCAGGGACTTTACAGCCTCCCTTCACAGCCCGGTTTCTTCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CTTCCCTCAGCCATGACAGCCACCAGGATACAGGATGCCTCCAGATaGCAGGGGGAGTGGGTTGTATCAGGGTGTCGAGAGGCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LPSAMTATRIQDASR*QGEWVVSGCREASQ
Trigger: TTGGGAAGCCTCTCGACACCCTGATACAACCCACTCCCCCTGGCATCTGGAGGCATCCTGTATCCTGGTGGCTGTCATGGCTGAGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp CCACCCTCCCTGGCAAAGTCCCGGATGAAGCGGCCACGTTCAGACTaGAAGATGAACTTCTGGGGCAAGGGCCCATGCTCCCGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: PPSLAKSRMKRPRSD*KMNFWGKGPCSRRK
Trigger: TTTTCTTCGGGAGCATGGGCCCTTGCCCCAGAAGTTCATCTTCCAGTCTGAACGTGGCCGCTTCATCCGGGACTTTGCCAGGGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp ACCCCTGCAGGTGTTGTTGCAGCTGGCTTAGCACTGCTGGGGGCTTaGGGCAGTCCACAAGTTCTCCAGATACTGTGCCGAGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: TPAGVVAAGLALLGA*GSPQVLQILCRAKL
Trigger: CAGCTTTGCTCGGCACAGTATCTGGAGAACTTGTGGACTGCCTCAAGCCCCCAGCAGTGCTAAGCCAGCTGCAACAACACCTGCAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp GGTGCCCAGGCCTTTGGGTTGGCCCGGATAAACTCACACAGCACCTaGTGCACTTCATGCACCACATCCTCTAAGCCAGGTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: GAQAFGLARINSHST*CTSCTTSSKPGPPV
Trigger: TACTGGTGGACCTGGCTTAGAGGATGTGGTGCATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CGCAACAGTTCCCGTCGGATGCTGTCTCCATGGCGGGAAGCCAGGTaGCCTAGGATGCCTACAACTGAGGCAATCTTGGGTACCCGTTTT +
Preference number: 5 (lower is better)
Translates to: RNSSRRMLSPWREAR*PRMPTTEAILGTRF
Trigger: AAAACGGGTACCCAAGATTGCCTCAGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGGAACTGTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp TGTGGCCTGAAGAGAGGGCTCTCCATTCCGGCCCCCAGAACCCCCTaGCAAACTATCATGAAACATGCGCAACAGTTCCCGTCGGATGCT +
Preference number: 5 (lower is better)
Translates to: CGLKRGLSIPAPRTP*QTIMKHAQQFPSDA
Trigger: AGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCCGGAATGGAGAGCCCTCTCTTCAGGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp ATGACAGCCACCAGGATACAGGATGCCTCCAGATGCCAGGGGGAGTaGGTTGTATCAGGGTGTCGAGAGGCTTCCCAATGGCTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MTATRIQDASRCQGE*VVSGCREASQWLKR
Trigger: CCTCTTGAGCCATTGGGAAGCCTCTCGACACCCTGATACAACCCACTCCCCCTGGCATCTGGAGGCATCCTGTATCCTGGTGGCTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp GCTCAGTTGTCCCATGAGGTCAATGGACCATGCACTAATCACGGGTaGCCAGGCCTTTGGGTTGGCCCGGATAAACTCACACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: AQLSHEVNGPCTNHG*PGLWVGPDKLTQHL
Trigger: CAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATTGACCTCATGGGACAACTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp CCCCTGCCAAACTATCATGAAACATGCGCAACAGTTCCCGTCGGATaGTGTCTCCATGGCGGGAAGCCAGGTGCCCTAGGATGCCTACAA +
Preference number: 5 (lower is better)
Translates to: PLPNYHETCATVPVG*CLHGGKPGALGCLQ
Trigger: TTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp AAGTCCCGGATGAAGCGGCCACGTTCAGACTGGAAGATGAACTTCTaGGGCAAGGGCCCATGCTCCCGAAGAAAACCCCAGACACTAAGC +
Preference number: 5 (lower is better)
Translates to: KSRMKRPRSDWKMNF*GKGPCSRRKPQTLS
Trigger: GCTTAGTGTCTGGGGTTTTCTTCGGGAGCATGGGCCCTTGCCCCAGAAGTTCATCTTCCAGTCTGAACGTGGCCGCTTCATCCGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp CATGAGGTCAATGGACCATGCACTAATCACGGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTCACACAGCACCTGCTGCACTTCATG +
Preference number: 5 (lower is better)
Translates to: HEVNGPCTNHGCPGL*VGPDKLTQHLLHFM
Trigger: CATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATTGACCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp AGCCGGTCACAGGCCTCTCTCACGGTGTCTGGCACAGCCAGGCCCTaGGTAGTAATAACTGAAGCAGGCATAGCTGTGTCTACTAAGAAC +
Preference number: 5 (lower is better)
Translates to: SRSQASLTVSGTARP*VVITEAGIAVSTKN
Trigger: GTTCTTAGTAGACACAGCTATGCCTGCTTCAGTTATTACTACCCAGGGCCTGGCTGTGCCAGACACCGTGAGAGAGGCCTGTGACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCCCAGGCGATCGATGTaGCGGTGGAGGACACTGTGC +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHPRRSM*RWRTLC
Trigger: GCACAGTGTCCTCCACCGCAACATCGATCGCCTGGG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp AGTCCACAAGTTCTCCAGATACTGTGCCGAGCAAAGCTGGTGACATaGCTGCCAGCTGCAGTAGGAAGGGAACTGTGGCCTGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SPQVLQILCRAKLVT*LPAAVGRELWPEER
Trigger: CCTCTCTTCAGGCCACAGTTCCCTTCCTACTGCAGCTGGCAGTCATGTCACCAGCTTTGCTCGGCACAGTATCTGGAGAACTTGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp TGGAAAACTGACCAGATCCCTCCAGGACCCGGCACTGCTGCAGTATaGCTCCGGTTAATGTCCAACAATGAGGCAGAAGCCAAAGGGGTT +
Preference number: 5 (lower is better)
Translates to: WKTDQIPPGPGTAAV*LRLMSNNEAEAKGV
Trigger: AACCCCTTTGGCTTCTGCCTCATTGTTGGACATTAACCGGAGGCATACTGCAGCAGTGCCGGGTCCTGGAGGGATCTGGTCAGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGGATGGCGGAGGTGCTaGAAAGCGGCCAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNGWRRC*KAAREE
Trigger: CTCTTCTCTGGCCGCTTTCAAGCACCTCCGCCATCC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp AGCAACAGACGCACTTCAAAAGGTGCCAGTTGGCTAAATACCTCGTaGATATTACCCAGGGCTGGTGGCAAGAGGCTTCCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SNRRTSKGASWLNTS*ILPRAGGKRLPSAM
Trigger: CATGGCTGAGGGAAGCCTCTTGCCACCAGCCCTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp CCCCAGACACTAAGCAGCAACAGACGCACTTCAAAAGGTGCCAGTTaGCTAAATACCTCGTGCATATTACCCAGGGCTGGTGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PQTLSSNRRTSKGAS*LNTSCILPRAGGKR
Trigger: CCTCTTGCCACCAGCCCTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCTGCTTAGTGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAGCACTGCTGGGGGCTaGAGGCAGTCCACAAGTTCT +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHSTAGG*RQSTSS
Trigger: AGAACTTGTGGACTGCCTCAAGCCCCCAGCAGTGCT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGCCAGGGGGAGTGGGTaGTATCAGGGTGTCGAGAGG +
Preference number: 5 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAARGSG*YQGVER
Trigger: CCTCTCGACACCCTGATACAACCCACTCCCCCTGGC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 90 bp TTCATTGAGAGAGCCAGTGGCATGGGGAACACGCTGATGCTGACCTaGATATGTGCTGCTCAGTTGTCCCATGAGGTCAATGGACCATGC +
Preference number: 5 (lower is better)
Translates to: FIERASGMGNTLMLT*ICAAQLSHEVNGPC
Trigger: GCATGGTCCATTGACCTCATGGGACAACTGAGCAGCACATATTCAGGTCAGCATCAGCGTGTTCCCCATGCCACTGGCTCTCTCAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 90 bp GGGTCTCATTGTCTCCATCCATTTCCCCTCCAAATAGTTCTGTGTTaGCCCGATGTAAGGCTCCCTCTACAAGCAGCTGTAGGACAGCCT +
Preference number: 5 (lower is better)
Translates to: GSHCLHPFPLQIVLC*PDVRLPLQAAVGQP
Trigger: AGGCTGTCCTACAGCTGCTTGTAGAGGGAGCCTTACATCGGGGCAACACAGAACTATTTGGAGGGGAAATGGATGGAGACAATGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp ATCAAAAACACCTCTCAAGTGGTCCAACACAGCAGCCCGAGCAGGTaGCAAAGAACGGAGCAAGAGAAGACCACATCGAGCATGTTCACG +
Preference number: 5 (lower is better)
Translates to: IKNTSQVVQHSSPSR*QRTEQEKTTSSMFT
Trigger: CGTGAACATGCTCGATGTGGTCTTCTCTTGCTCCGTTCTTTGCCACCTGCTCGGGCTGCTGTGTTGGACCACTTGAGAGGTGTTTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 90 bp CGCTTCCGTTCTAGCCGTAATGTCTCTCCACACAGTTCTCCAACATaGTTTCGTAATGCATCAAGAAAGGGCACTGGACGAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RFRSSRNVSPHSSPT*FRNASRKGTGRGGG
Trigger: CCCACCTCCTCGTCCAGTGCCCTTTCTTGATGCATTACGAAACCATGTTGGAGAACTGTGTGGAGAGACATTACGGCTAGAACGGAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCAGCCCAGGCCTTTGGGTaGGCCCGGATAAACTCACAC +
Preference number: 5 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAAQAFG*ARINSH
Trigger: GTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGC...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACGCCAGGTTTAGCATGTaGTCTAGCTCTTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNARFSM*SSSSLG
Trigger: CCCCAGAGAAGAGCTAGACAACATGCTAAACCTGGC...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACCCAAATAGTTCTGTGTaGCCCCGATGTAAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHPNSSV*PRCKAP
Trigger: GGGAGCCTTACATCGGGGCAACACAGAACTATTTGG...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACACAACTGAGGCAATCTaGGGTACCCGTTTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHTTEAI*GTRFSP
Trigger: TGGGGAAAAACGGGTACCCAAGATTGCCTCAGTTGT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAAAAGCCTTGATTTCTaGGGACAGCTCCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHKSLDF*GQLLST
Trigger: AGTGCTCAGGAGCTGTCCCAAGAAATCAAGGCTTTT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAGCATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACATATGTGCTGCTCAGTaGTCCCATGAGGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: KHPPFCSTLGSSLSLTSHICAAQ*SHEVNG
Trigger: TCCATTGACCTCATGGGACAACTGAGCAGCACATAT...GTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACCTGCATATAGCTGGGTaGCCAAACTCAACTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNLHIAG*PNSTLQ
Trigger: CTGAAGAGTTGAGTTTGGCAACCCAGCTATATGCAG...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCAGTTTAACCTCGCACAACATTGAGAGGGTCTCATaGTCTCCATCCATTTCCCCT +
Preference number: 5 (lower is better)
Translates to: HPPFCSTLGSSLSLTSHNIERVS*SPSISP
Trigger: AGGGGAAATGGATGGAGACAATGAGACCCTCTCAAT...GTTGTGCGAGGTTAAACTGAGAGAAGAGCCTAAGGTGCTACAGAAGGGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATTCAAAAGGTGCCAGTaGGCTAAATACCTCGTGCAT +
Preference number: 5 (lower is better)
Translates to: KVTPLITYGLRSIHPSVAFKRCQ*AKYLVH
Trigger: ATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS-3UTR CAA 90 bp AAAGTGACACCACTCATTACGTACGGACTTAGAAGCATCCACCCTTCTGTAGCATTGATGGTTTCGAGATaGAACAATTTTAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KVTPLITYGLRSIHPSVALMVSR*NNFRWL
Trigger: AAGCCACCTAAAATTGTTCAATCTCGAAACCATCAA...TGCTACAGAAGGGTGGATGCTTCTAAGTCCGTACGTAATGAGTGGTGTCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp GAGATCCCGCTCCACGGTGGCTCGTGCATGATCCTCTaGGGGCCAGGCCAGCTCAGCACCAGCTGCATCAGG +
Preference number: 6 (lower is better)
Translates to: EIPLHGGSCMIL*GPGQLSTSCIR
Trigger: CCTGATGCAGCTGGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp CCAATTCGGAGATCCCGCTCCACGGTGGCTCGTGCATaGTCCTCTGGGGGCCAGGCCAGCTCAGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: PIRRSRSTVARA*SSGGQASSAPA
Trigger: AGCTGGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp CCTACCAATTCGGAGATCCCGCTCCACGGTGGCTCGTaGATGATCCTCTGGGGGCCAGGCCAGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: PTNSEIPLHGGS*MILWGPGQLST
Trigger: GGTGCTGAGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGGTAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp GGAAGCGCCTACCAATTCGGAGATCCCGCTCCACGGTaGCTCGTGCATGATCCTCTGGGGGCCAGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GSAYQFGDPAPR*LVHDPLGARPA
Trigger: AGCTGGCCTGGCCCCCAGAGGATCATGCACGAGCCACCGTGGAGCGGGATCTCCGAATTGGTAGGCGCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp AACCGGGCTGTGAAGGGAGGCTGTAAAGTCCCTGCATaGACTCGAGCCAGGCAGCTTCGGAAGGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: NRAVKGGCKVPA*TRARQLRKARG
Trigger: TCCCCTGGCCTTCCGAAGCTGCCTGGCTCGAGTGCATGCAGGGACTTTACAGCCTCCCTTCACAGCCCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp AACCGGGCCCCTAAGGCTGAAGGGCCCTCACCACCCTaGTGCTCCCACCCCACCAACAAGGCCAAATTTCGA +
Preference number: 6 (lower is better)
Translates to: NRAPKAEGPSPP*CSHPTNKAKFR
Trigger: TCGAAATTTGGCCTTGTTGGTGGGGTGGGAGCAGCAGGGTGGTGAGGGCCCTTCAGCCTTAGGGGCCCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TCAAGTCCCCTGCCGAAGCAGAGTGGATGGCGGAGGTaGTTGAAAGCGGCCAGAGAAGAGCCCCAGGCGATC +
Preference number: 6 (lower is better)
Translates to: SSPLPKQSGWRR*LKAAREEPQAI
Trigger: GATCGCCTGGGGCTCTTCTCTGGCCGCTTTCAAGCACCTCCGCCATCCACTCTGCTTCGGCAGGGGACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TCCCGTCGGATGCTGTCTCCATGGCGGGAAGCCAGGTaGCCTAGGATGCCTACAACTGAGGCAATCTTGGGT +
Preference number: 6 (lower is better)
Translates to: SRRMLSPWREAR*PRMPTTEAILG
Trigger: ACCCAAGATTGCCTCAGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp AGCCCCAGGCGATCGATGTTGCGGTGGAGGACACTGTaGAGCACAGACAGATGTGGTCCTCCTTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPRRSMLRWRTL*STDRCGPPSAP
Trigger: TGGAGCTGAAGGAGGACCACATCTGTCTGTGCTGCACAGTGTCCTCCACCGCAACATCGATCGCCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp GAAAGCGGCCAGAGAAGAGCCCCAGGCGATCGATGTTaGGGTGGAGGACACTGTGCAGCACAGACAGATGTG +
Preference number: 6 (lower is better)
Translates to: ESGQRRAPGDRC*GGGHCAAQTDV
Trigger: CACATCTGTCTGTGCTGCACAGTGTCCTCCACCGCAACATCGATCGCCTGGGGCTCTTCTCTGGCCGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp CTGGCAAAGTCCCGGATGAAGCGGCCACGTTCAGACTaGAAGATGAACTTCTGGGGCAAGGGCCCATGCTCC +
Preference number: 6 (lower is better)
Translates to: LAKSRMKRPRSD*KMNFWGKGPCS
Trigger: GGAGCATGGGCCCTTGCCCCAGAAGTTCATCTTCCAGTCTGAACGTGGCCGCTTCATCCGGGACTTTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 90 bp TGGGGGAGCAGCTGCTACCAGCTTCAAAAGCTCAAACAGCAGAGGTaGTTCCCGGAAGCGCCTACCAATTCGGAGATCCCGCTCCACGGT +
Preference number: 6 (lower is better)
Translates to: WGSSCYQLQKLKQQR*FPEAPTNSEIPLHG
Trigger: ACCGTGGAGCGGGATCTCCGAATTGGTAGGCGCTTCCGGGAACAACCTCTGCTGTTTGAGCTTTTGAAGCTGGTAGCAGCTGCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp ATTAATGTGCGGGTGGCCCTGCAGCCCATCCACAGCTaGAGCAGTTCATTGAGAGAGCCAGTGGCATGGGGA +
Preference number: 6 (lower is better)
Translates to: INVRVALQPIHS*SSSLREPVAWG
Trigger: TCCCCATGCCACTGGCTCTCTCAATGAACTGCTGCAGCTGTGGATGGGCTGCAGGGCCACCCGCACATTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp GGCCCCCAGAACCCCCTGCCAAACTATCATGAAACATaGGCAACAGTTCCCGTCGGATGCTGTCTCCATGGC +
Preference number: 6 (lower is better)
Translates to: GPQNPLPNYHET*ATVPVGCCLHG
Trigger: GCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp CAGCACGGAGCAGTAGCACAGGGCTGGGGGAGCAGCTaGTACCAGCTTCAAAAGCTCAAACAGCAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: QHGAVAQGWGSS*YQLQKLKQQRL
Trigger: CAACCTCTGCTGTTTGAGCTTTTGAAGCTGGTAGCAGCTGCTCCCCCAGCCCTGTGCTACTGCTCCGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp AACATGCGCAACAGTTCCCGTCGGATGCTGTCTCCATaGCGGGAAGCCAGGTGCCCTAGGATGCCTACAACT +
Preference number: 6 (lower is better)
Translates to: NMRNSSRRMLSP*REARCPRMPTT
Trigger: AGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp ACCAGGATACAGGATGCCTCCAGATGCCAGGGGGAGTaGGTTGTATCAGGGTGTCGAGAGGCTTCCCAATGG +
Preference number: 6 (lower is better)
Translates to: TRIQDASRCQGE*VVSGCREASQW
Trigger: CCATTGGGAAGCCTCTCGACACCCTGATACAACCCACTCCCCCTGGCATCTGGAGGCATCCTGTATCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp GACCATGCACTAATCACGGGTGCCCAGGCCTTTGGGTaGGCCCGGATAAACTCACACAGCACCTGCTGCACT +
Preference number: 6 (lower is better)
Translates to: DHALITGAQAFG*ARINSHSTCCT
Trigger: AGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 90 bp AGGTCAATGGACCATGCACTAATCACGGGTGCCCAGGCCTTTGGGTaGGCCCGGATAAACTCACACAGCACCTGCTGCACTTCATGCACC +
Preference number: 6 (lower is better)
Translates to: RSMDHALITGAQAFG*ARINSHSTCCTSCT
Trigger: GGTGCATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp CCATTCCGGCCCCCAGAACCCCCTGCCAAACTATCATaGAACATGCGCAACAGTTCCCGTCGGATGCTGTCT +
Preference number: 6 (lower is better)
Translates to: PFRPPEPPAKLS*NMRNSSRRMLS
Trigger: AGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCCGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp GGTGTTGTTGCAGCTGGCTTAGCACTGCTGGGGGCTTaGGGCAGTCCACAAGTTCTCCAGATACTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: GVVAAGLALLGA*GSPQVLQILCR
Trigger: TCGGCACAGTATCTGGAGAACTTGTGGACTGCCTCAAGCCCCCAGCAGTGCTAAGCCAGCTGCAACAACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TGTGCTGCTCAGTTGTCCCATGAGGTCAATGGACCATaGACTAATCACGGGTGCCCAGGCCTTTGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: CAAQLSHEVNGP*TNHGCPGLWVG
Trigger: GCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATTGACCTCATGGGACAACTGAGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp AAGAGAGGGCTCTCCATTCCGGCCCCCAGAACCCCCTaGCAAACTATCATGAAACATGCGCAACAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: KRGLSIPAPRTP*QTIMKHAQQFP
Trigger: CGGGAACTGTTGCGCATGTTTCATGATAGTTTGGCAGGGGGTTCTGGGGGCCGGAATGGAGAGCCCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp ACCTCTCAAGTGGTCCAACACAGCAGCCCGAGCAGGTaGCAAAGAACGGAGCAAGAGAAGACCACATCGAGC +
Preference number: 6 (lower is better)
Translates to: TSQVVQHSSPSR*QRTEQEKTTSS
Trigger: GCTCGATGTGGTCTTCTCTTGCTCCGTTCTTTGCCACCTGCTCGGGCTGCTGTGTTGGACCACTTGAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp AATGGACCATGCACTAATCACGGGTGCCCAGGCCTTTaGGTTGGCCCGGATAAACTCACACAGCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: NGPCTNHGCPGL*VGPDKLTQHLL
Trigger: CAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp GAGCAAGAGAAGACCACATCGAGCATGTTCACGAGCTaGGAGCTGGTGGCCCAGAATAGGGTCTACACCGGT +
Preference number: 6 (lower is better)
Translates to: EQEKTTSSMFTS*ELVAQNRVYTG
Trigger: ACCGGTGTAGACCCTATTCTGGGCCACCAGCTCTCAGCTCGTGAACATGCTCGATGTGGTCTTCTCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp GTTCTCCAGATACTGTGCCGAGCAAAGCTGGTGACATaGCTGCCAGCTGCAGTAGGAAGGGAACTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: VLQILCRAKLVT*LPAAVGRELWP
Trigger: AGGCCACAGTTCCCTTCCTACTGCAGCTGGCAGTCATGTCACCAGCTTTGCTCGGCACAGTATCTGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp CTCAACTCTTCAGGGCTTCTGGCTCTGCTCAGTAGATaGCCCAAGGCCTCAGGTCCACAGCTAGGTCGTGTA +
Preference number: 6 (lower is better)
Translates to: LNSSGLLALLSR*PKASGPQLGRV
Trigger: TACACGACCTAGCTGTGGACCTGAGGCCTTGGGTCATCTACTGAGCAGAGCCAGAAGCCCTGAAGAGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp GCCTTTGGGTTGGCCCGGATAAACTCACACAGCACCTaGTGCACTTCATGCACCACATCCTCTAAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: AFGLARINSHST*CTSCTTSSKPG
Trigger: ACCTGGCTTAGAGGATGTGGTGCATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TCCCATGAGGTCAATGGACCATGCACTAATCACGGGTaGCCAGGCCTTTGGGTTGGCCCGGATAAACTCACA +
Preference number: 6 (lower is better)
Translates to: SHEVNGPCTNHG*PGLWVGPDKLT
Trigger: TGTGAGTTTATCCGGGCCAACCCAAAGGCCTGGGCACCCGTGATTAGTGCATGGTCCATTGACCTCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TGCTGTCTCCATGGCGGGAAGCCAGGTGCCCTAGGATaGCTACAACTGAGGCAATCTTGGGTACCCGTTTTT +
Preference number: 6 (lower is better)
Translates to: CCLHGGKPGALG*LQLRQSWVPVF
Trigger: AAAAACGGGTACCCAAGATTGCCTCAGTTGTAGGCATCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp AACTATCATGAAACATGCGCAACAGTTCCCGTCGGATaGTGTCTCCATGGCGGGAAGCCAGGTGCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: NYHETCATVPVG*CLHGGKPGALG
Trigger: TCCTAGGGCACCTGGCTTCCCGCCATGGAGACAGCATCCGACGGGAACTGTTGCGCATGTTTCATGATAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp GGACCAGCCACAGGACTTTCTTCTAGGGCAGCTAGGTaGGCCCGGACACTCTCATCAAAAACACCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: GPATGLSSRAAR*ARTLSSKTPLK
Trigger: CTTGAGAGGTGTTTTTGATGAGAGTGTCCGGGCCCACCTAGCTGCCCTAGAAGAAAGTCCTGTGGCTGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp TTAGGTGGCTTTAAGCCACGGCCGATAACTCCAGCATaGAAAACTGACCAGATCCCTCCAGGACCCGGCACT +
Preference number: 6 (lower is better)
Translates to: LGGFKPRPITPA*KTDQIPPGPGT
Trigger: AGTGCCGGGTCCTGGAGGGATCTGGTCAGTTTTCCATGCTGGAGTTATCGGCCGTGGCTTAAAGCCACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp GCAAGGCATCCACACATGCATCTGGGCAGCTACCAATaGGGGCCGAGAGGCACTGCACATAGATGTCCATTA +
Preference number: 6 (lower is better)
Translates to: ARHPHMHLGSYQ*GPRGTAHRCPL
Trigger: TAATGGACATCTATGTGCAGTGCCTCTCGGCCCTCATTGGTAGCTGCCCAGATGCATGTGTGGATGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp CCACCAACAAGGCCAAATTTCGAAGAAACCGGGCTGTaGAGGGAGGCTGTAAAGTCCCTGCATGCACTCGAG +
Preference number: 6 (lower is better)
Translates to: PPTRPNFEETGL*REAVKSLHALE
Trigger: CTCGAGTGCATGCAGGGACTTTACAGCCTCCCTTCACAGCCCGGTTTCTTCGAAATTTGGCCTTGTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TTTGGGTTGGCCCGGATAAACTCACACAGCACCTGCTaGACTTCATGCACCACATCCTCTAAGCCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: FGLARINSHSTC*TSCTTSSKPGP
Trigger: TGGACCTGGCTTAGAGGATGTGGTGCATGAAGTGCAGCAGGTGCTGTGTGAGTTTATCCGGGCCAACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp GCACAGCCAGGTTTAGCATGTTGTCTAGCTCTTCTCTaGGGAACCCCTGCAGGTGTTGTTGCAGCTGGCTTA +
Preference number: 6 (lower is better)
Translates to: AQPGLACCLALL*GTPAGVVAAGL
Trigger: TAAGCCAGCTGCAACAACACCTGCAGGGGTTCCCCAGAGAAGAGCTAGACAACATGCTAAACCTGGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp AGGCCAGAGAGACTGACCACTAGCCCTGCATATAGCTaGGTTGCCAAACTCAACTCTTCAGGGCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: RPERLTTSPAYS*VAKLNSSGLLA
Trigger: AGCCAGAAGCCCTGAAGAGTTGAGTTTGGCAACCCAGCTATATGCAGGGCTAGTGGTCAGTCTCTCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp AGCTGCTACCAGCTTCAAAAGCTCAAACAGCAGAGGTaGTTCCCGGAAGCGCCTACCAATTCGGAGATCCCG +
Preference number: 6 (lower is better)
Translates to: SCYQLQKLKQQR*FPEAPTNSEIP
Trigger: CGGGATCTCCGAATTGGTAGGCGCTTCCGGGAACAACCTCTGCTGTTTGAGCTTTTGAAGCTGGTAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS TCA 72 bp AGAGCCAGTGGCATGGGGAACACGCTGATGCTGACCTaGATATGTGCTGCTCAGTTGTCCCATGAGGTCAAT +
Preference number: 6 (lower is better)
Translates to: RASGMGNTLMLT*ICAAQLSHEVN
Trigger: ATTGACCTCATGGGACAACTGAGCAGCACATATTCAGGTCAGCATCAGCGTGTTCCCCATGCCACTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 90 bp AGGGTCTCATTGTCTCCATCCATTTCCCCTCCAAATAGTTCTGTGTaGCCCCGATGTAAGGCTCCCTCTACAAGCAGCTGTAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: RVSLSPSISPPNSSV*PRCKAPSTSSCRTA
Trigger: GGCTGTCCTACAGCTGCTTGTAGAGGGAGCCTTACATCGGGGCAACACAGAACTATTTGGAGGGGAAATGGATGGAGACAATGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 90 bp ACCCCAGACACTAAGCAGCAACAGACGCACTTCAAAAGGTGCCAGTaGGCTAAATACCTCGTGCATATTACCCAGGGCTGGTGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: TPDTKQQQTHFKRCQ*AKYLVHITQGWWQE
Trigger: CTCTTGCCACCAGCCCTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCTGCTTAGTGTCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp CCAATATGGGCCACAACCCAGTCAAAGTGTGGGGAATaGTGGACAGAAGTGTCTAGCAAGGCATCCACACAT +
Preference number: 6 (lower is better)
Translates to: PIWATTQSKCGE*WTEVSSKASTH
Trigger: ATGTGTGGATGCCTTGCTAGACACTTCTGTCCAGCATTCCCCACACTTTGACTGGGTTGTGGCCCATATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp ATATGGGCCACAACCCAGTCAAAGTGTGGGGAATGCTaGACAGAAGTGTCTAGCAAGGCATCCACACATGCA +
Preference number: 6 (lower is better)
Translates to: IWATTQSKCGEC*TEVSSKASTHA
Trigger: TGCATGTGTGGATGCCTTGCTAGACACTTCTGTCCAGCATTCCCCACACTTTGACTGGGTTGTGGCCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp TGTCTCCATCCATTTCCCCTCCAAATAGTTCTGTGTTaGCCCGATGTAAGGCTCCCTCTACAAGCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: CLHPFPLQIVLC*PDVRLPLQAAV
Trigger: TACAGCTGCTTGTAGAGGGAGCCTTACATCGGGGCAACACAGAACTATTTGGAGGGGAAATGGATGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CCA 72 bp CTAAGCAGCAACAGACGCACTTCAAAAGGTGCCAGTTaGCTAAATACCTCGTGCATATTACCCAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: LSSNRRTSKGAS*LNTSCILPRAG
Trigger: ACCAGCCCTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCTGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp TTGTCTCCATCCATTTCCCCTCCAAATAGTTCTGTGTaGCCCCGATGTAAGGCTCCCTCTACAAGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LSPSISPPNSSV*PRCKAPSTSSC
Trigger: ACAGCTGCTTGTAGAGGGAGCCTTACATCGGGGCAACACAGAACTATTTGGAGGGGAAATGGATGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp CCAACAATGAGGCAGAAGCCAAAGGGGTTGAGACAATaGAGAGGGTCTCATTGTCTCCATCCATTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: PTMRQKPKGLRQ*RGSHCLHPFPL
Trigger: GAGGGGAAATGGATGGAGACAATGAGACCCTCTCAATTGTCTCAACCCCTTTGGCTTCTGCCTCATTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp ACTAAGCAGCAACAGACGCACTTCAAAAGGTGCCAGTaGGCTAAATACCTCGTGCATATTACCCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TKQQQTHFKRCQ*AKYLVHITQGW
Trigger: CCAGCCCTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCTGCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS GCA 72 bp CCAGACACTAAGCAGCAACAGACGCACTTCAAAAGGTaGCAGTTGGCTAAATACCTCGTGCATATTACCCAG +
Preference number: 6 (lower is better)
Translates to: PDTKQQQTHFKR*QLAKYLVHITQ
Trigger: CTGGGTAATATGCACGAGGTATTTAGCCAACTGGCACCTTTTGAAGTGCGTCTGTTGCTGCTTAGTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7
CDS CAA 72 bp GAGGCTAACGAGGCTCTGGGTGTTATAGATCACTTCTaGATGGTTTCGAGATTGAACAATTTTAGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: EANEALGVIDHF*MVSRLNNFRWL
Trigger: AAGCCACCTAAAATTGTTCAATCTCGAAACCATCAAGAAGTGATCTATAACACCCAGAGCCTCGTTAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096249.7